| (1) AGO1.ip OTHER.mut | (2) B-CELL | (11) CELL-LINE | (2) CERVIX | (3) HEART | (1) HELA | (1) OTHER | (9) SKIN | (1) XRN.ip |
| TACCTCTTTAGGATCCAACTTCGTTTCTGCCCCCGGGGAAAAGCCTTTCGATTTGAGCTAGCTTTTTCCTTTTTTCCCAGGCCAGTTATAGTTTTTATGTGATGGGATGGAAAAAGTATCCCAGTCGCGAAACTTGCCTGACCTGCAGAAATGTGTAGTCGTGCCTGGTGCTGTTTGAACGGGATCTTTTCCTTTTGCAGGCGGGAGGGTTCGAGGCCAATGATGGGAGACCACCGGGATGGGCAGGTGA ......................................................((((.(((..............((((((..((...((((((...(((((((((((.......))))))).)))))))))).))..(((..(((....)))...)))..)))))).))))))).......................................................................... ..................................................51............................................................................................................................177....................................................................... | Size | Perfect hit | Total Norm | Perfect Norm | SRR343336 | SRR343337 | SRR343335 | SRR343334 | SRR207110(GSM721072) Nuclear RNA. (cell line) | SRR207114(GSM721076) "IP against AGO 1 & 2, RRP40 knockdown". (ago1/2 RRP40 cell line) | SRR107297(GSM677704) 18-30nt fraction of small RNA. (cell line) | SRR189783 | SRR207115(GSM721077) XRN1&2 knockdown. (XRN1/XRN2 cell line) | SRR039191(GSM494810) PBMCs were isolated by ficoll gradient from t. (blood) | SRR342894(SRX096790) small RNA seq of Right atrial tissue. (heart) | SRR189785 | SRR189779(GSM714639) cell line: HEK293clip variant: PAR-CLIPenzyma. (cell line) | SRR037936(GSM510474) 293cand1. (cell line) | SRR015359(GSM380324) Germinal Center B cell (GC136). (B cell) | SRR330883(SRX091721) tissue: skin psoriatic uninvolveddisease stat. (skin) | SRR330900(SRX091738) tissue: skin psoriatic uninvolveddisease stat. (skin) | GSM532876(GSM532876) G547T. (cervix) | DRR000556(DRX000314) "THP-1 whole cell RNA, after 3 day treatment . (cell line) | SRR330891(SRX091729) tissue: skin psoriatic uninvolveddisease stat. (skin) | GSM416733(GSM416733) HEK293. (cell line) | SRR189782 | SRR037937(GSM510475) 293cand2. (cell line) | SRR033716(GSM497061) Mentle Cell Lymphoma (MCL114). (B cell) | SRR330904(SRX091742) tissue: normal skindisease state: normal. (skin) | SRR037931(GSM510469) 293GFP. (cell line) | SRR189780(GSM714640) cell line: HEK293clip variant: PAR-CLIPenzyma. (cell line) | SRR330919(SRX091757) tissue: normal skindisease state: normal. (skin) | DRR001486(DRX001040) "Hela long cytoplasmic cell fraction, LNA(+)". (hela) | SRR330915(SRX091753) tissue: normal skindisease state: normal. (skin) | SRR342897(SRX096793) small RNA seq of Left atrial tissue. (heart) | SRR330878(SRX091716) tissue: skin psoriatic involveddisease state:. (skin) | SRR330886(SRX091724) tissue: skin psoriatic uninvolveddisease stat. (skin) | SRR330859(SRX091697) tissue: skin psoriatic involveddisease state:. (skin) | SRR342899(SRX096795) small RNA seq of Left atrial tissue. (heart) | SRR040008(GSM532893) G727N. (cervix) |
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| .........................................................................................................................................................TGTAGTCGTGCCTGGTAGGC............................................................................. | 20 | 1 | 62.00 | 7.00 | 9.00 | 17.00 | 20.00 | 11.00 | 2.00 | - | - | - | 3.00 | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - |
| .........................................................................................................................................................TGTAGTCGTGCCTGGTAG............................................................................... | 18 | 1 | 47.00 | 7.00 | 7.00 | 8.00 | 3.00 | 4.00 | 22.00 | - | 3.00 | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - |
| .........................................................................................................................................................TGTAGTCGTGCCTGGTAGG.............................................................................. | 19 | 1 | 39.00 | 7.00 | 14.00 | 8.00 | 8.00 | 8.00 | - | - | - | - | - | - | - | - | - | - | - | - | 1.00 | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - |
| ..........................................................................................................................................................GTAGTCGTGCCTGGTAGGC............................................................................. | 19 | 1 | 35.00 | 1.00 | 16.00 | 14.00 | 1.00 | 2.00 | - | - | 1.00 | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | 1.00 | - | - | - | - | - | - | - | - | - | - | - | - |
| .........................................................................................................................................................TGTAGTCGTGCCTGGTA................................................................................ | 17 | 1 | 23.00 | 7.00 | 8.00 | 8.00 | 2.00 | 3.00 | - | - | - | - | - | - | 1.00 | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | 1.00 | - | - | - |
| ..........................................................................................................................................................GTAGTCGTGCCTGGTAG............................................................................... | 17 | 1 | 17.00 | 1.00 | 1.00 | 2.00 | - | 1.00 | 2.00 | 9.00 | - | - | - | - | - | - | - | - | 1.00 | 1.00 | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - |
| ..........................................................................................................................................................GTAGTCGTGCCTGGTAGG.............................................................................. | 18 | 1 | 9.00 | 1.00 | 3.00 | 3.00 | 1.00 | 2.00 | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - |
| .........................................................................................................................................................TGTAGTCGTGCCTGGT................................................................................. | 16 | 1 | 7.00 | 7.00 | 2.00 | 1.00 | 3.00 | - | - | - | - | - | - | - | 1.00 | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - |
| .........................................................................................................................................................TGTAGTCGTGCCTGG.................................................................................. | 15 | 3 | 3.33 | 3.33 | 1.67 | 0.33 | 1.00 | 0.33 | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - |
| ..........................................................................................................................................................GTAGTCGTGCCTGGTA................................................................................ | 16 | 1 | 2.00 | 1.00 | - | - | - | 1.00 | - | - | - | - | - | - | - | 1.00 | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - |
| .........................................................................................................................................................TGTAGTCGTGCCTGGTAGA.............................................................................. | 19 | 1 | 2.00 | 7.00 | 1.00 | 1.00 | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - |
| ...........................................................................................................................................................................TGTTTGAACGGGATCTTTTCCTTTTG..................................................... | 26 | 1 | 2.00 | 2.00 | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | 1.00 | - | - | - | - | 1.00 | - | - | - | - | - | - | - | - | - | - |
| ...................................................TTTGAGCTAGCTTTTGAGA.................................................................................................................................................................................... | 19 | 2.00 | 0.00 | - | - | - | - | - | - | - | - | - | 2.00 | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | |
| ...............................................................................................................................................................................................................................TGGGAGACCACCGGGGAA......... | 18 | 2.00 | 0.00 | - | - | - | - | - | - | - | 2.00 | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | |
| ..............................................................................................................................................................................................................................ATGGGAGACCACCGGG............ | 16 | 1 | 1.00 | 1.00 | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | 1.00 | - | - | - | - | - | - |
| ..........................................................................................................................................................................................................................AATGATGGGAGACCACCGGGATGGGCAG.... | 28 | 1 | 1.00 | 1.00 | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | 1.00 | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - |
| ...........................................................................................................................................................................................................................ATGATGGGAGACCACCGGGATGGGCAGGCGAG | 32 | 1.00 | 0.00 | - | - | - | - | - | - | - | - | - | - | - | - | 1.00 | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | |
| ...............................................................................................................................................................................................................................TGGGAGACCACCGGGGAAT........ | 19 | 1.00 | 0.00 | - | - | - | - | - | - | - | 1.00 | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | |
| .......................................AAAGCCTTTCGATTTGAGC................................................................................................................................................................................................ | 19 | 1 | 1.00 | 1.00 | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | 1.00 | - | - | - | - | - |
| .....................................................................................................................................................................................GGATCTTTTCCTTTTGCTT.................................................. | 19 | 1.00 | 0.00 | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | 1.00 | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | |
| .ACCTCTTTAGGATCCAAA....................................................................................................................................................................................................................................... | 18 | 1.00 | 0.00 | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | 1.00 | - | - | - | - | - | - | - | - | - | - | - | - | - | |
| .....................................................................................................................................................................................................................................ACCACCGGGATGGGCAG.... | 17 | 1 | 1.00 | 1.00 | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | 1.00 | - | - | - | - | - | - | - |
| .............................................................................................................................................................................................................AGGGTTCGAGGCCAATGATGGGAGACCACC............... | 30 | 1 | 1.00 | 1.00 | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | 1.00 | - | - | - | - |
| ...........................................................................................................................................................................TGTTTGAACGGGATCTTTTCCTTTT...................................................... | 25 | 1 | 1.00 | 1.00 | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | 1.00 | - | - |
| .............................................................CTTTTTCCTTTTTTCCCACA......................................................................................................................................................................... | 20 | 1.00 | 0.00 | - | - | - | 1.00 | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | |
| ..........................................................................................................................................................GTAGTCGTGCCTGGT................................................................................. | 15 | 1 | 1.00 | 1.00 | - | 1.00 | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - |
| ...............................................................................................................................................................................................................................TGGGAGACCACCGGGATGGGCAG.... | 23 | 1 | 1.00 | 1.00 | - | - | - | - | - | - | - | - | - | - | - | - | - | 1.00 | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - |
| .........................................................................................................................................................TGTAGTCGTGCCTGGTGGG.............................................................................. | 19 | 1.00 | 0.00 | 1.00 | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | |
| ............................................................................................................................................................................GTTTGAACGGGATCTTTTCCTTTTGCAG.................................................. | 28 | 1 | 1.00 | 1.00 | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | 1.00 | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - |
| ........................................................................................................................................................GTGTAGTCGTGCCTGGTGCTGTTTGAACGGG................................................................... | 31 | 1 | 1.00 | 1.00 | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | 1.00 | - | - | - | - | - | - | - | - |
| ..............................................................................................................................................................................................................................ATGGGAGACCACCGGGATGGGCAGCACC | 28 | 1.00 | 0.00 | - | - | - | - | - | - | - | - | - | - | - | - | 1.00 | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | |
| .........................................................................................................................................................TGTAGTCGTGCCTGGTAGGT............................................................................. | 20 | 1 | 1.00 | 7.00 | - | - | - | - | - | - | - | - | - | - | - | 1.00 | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - |
| .........................................................................................................................................................TGTAGTCGTGCCTGGTATGC............................................................................. | 20 | 1 | 1.00 | 7.00 | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | 1.00 | - | - | - | - | - | - | - | - | - | - | - |
| ..................................................................................................................................................................................ACGGGATCTTTTCCTTTTGCAGGCGGGAGGG......................................... | 31 | 1 | 1.00 | 1.00 | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | 1.00 | - | - | - | - | - | - | - | - | - |
| .......................................................................................................................................................................................................GGCGGGAGGGTTCGAGGC................................. | 18 | 2 | 0.50 | 0.50 | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | 0.50 |
| ...........................................................................................................................................................................TGTTTGAACGGGATC................................................................ | 15 | 2 | 0.50 | 0.50 | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | 0.50 | - |
| TACCTCTTTAGGATCCAACTTCGTTTCTGCCCCCGGGGAAAAGCCTTTCGATTTGAGCTAGCTTTTTCCTTTTTTCCCAGGCCAGTTATAGTTTTTATGTGATGGGATGGAAAAAGTATCCCAGTCGCGAAACTTGCCTGACCTGCAGAAATGTGTAGTCGTGCCTGGTGCTGTTTGAACGGGATCTTTTCCTTTTGCAGGCGGGAGGGTTCGAGGCCAATGATGGGAGACCACCGGGATGGGCAGGTGA ......................................................((((.(((..............((((((..((...((((((...(((((((((((.......))))))).)))))))))).))..(((..(((....)))...)))..)))))).))))))).......................................................................... ..................................................51............................................................................................................................177....................................................................... | Size | Perfect hit | Total Norm | Perfect Norm | SRR343336 | SRR343337 | SRR343335 | SRR343334 | SRR207110(GSM721072) Nuclear RNA. (cell line) | SRR207114(GSM721076) "IP against AGO 1 & 2, RRP40 knockdown". (ago1/2 RRP40 cell line) | SRR107297(GSM677704) 18-30nt fraction of small RNA. (cell line) | SRR189783 | SRR207115(GSM721077) XRN1&2 knockdown. (XRN1/XRN2 cell line) | SRR039191(GSM494810) PBMCs were isolated by ficoll gradient from t. (blood) | SRR342894(SRX096790) small RNA seq of Right atrial tissue. (heart) | SRR189785 | SRR189779(GSM714639) cell line: HEK293clip variant: PAR-CLIPenzyma. (cell line) | SRR037936(GSM510474) 293cand1. (cell line) | SRR015359(GSM380324) Germinal Center B cell (GC136). (B cell) | SRR330883(SRX091721) tissue: skin psoriatic uninvolveddisease stat. (skin) | SRR330900(SRX091738) tissue: skin psoriatic uninvolveddisease stat. (skin) | GSM532876(GSM532876) G547T. (cervix) | DRR000556(DRX000314) "THP-1 whole cell RNA, after 3 day treatment . (cell line) | SRR330891(SRX091729) tissue: skin psoriatic uninvolveddisease stat. (skin) | GSM416733(GSM416733) HEK293. (cell line) | SRR189782 | SRR037937(GSM510475) 293cand2. (cell line) | SRR033716(GSM497061) Mentle Cell Lymphoma (MCL114). (B cell) | SRR330904(SRX091742) tissue: normal skindisease state: normal. (skin) | SRR037931(GSM510469) 293GFP. (cell line) | SRR189780(GSM714640) cell line: HEK293clip variant: PAR-CLIPenzyma. (cell line) | SRR330919(SRX091757) tissue: normal skindisease state: normal. (skin) | DRR001486(DRX001040) "Hela long cytoplasmic cell fraction, LNA(+)". (hela) | SRR330915(SRX091753) tissue: normal skindisease state: normal. (skin) | SRR342897(SRX096793) small RNA seq of Left atrial tissue. (heart) | SRR330878(SRX091716) tissue: skin psoriatic involveddisease state:. (skin) | SRR330886(SRX091724) tissue: skin psoriatic uninvolveddisease stat. (skin) | SRR330859(SRX091697) tissue: skin psoriatic involveddisease state:. (skin) | SRR342899(SRX096795) small RNA seq of Left atrial tissue. (heart) | SRR040008(GSM532893) G727N. (cervix) |
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| .................................................................................................................................................................TGCCTGGTGCTGTTTAACA...................................................................... | 19 | 1.00 | 0.00 | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | 1.00 | - | - | - | - | - | - | - | - | - | - | - | - | - | - |