ID: uc002luy.2_intron_24_0_chr19_2129124_r.5p
GENE: (6)
chr19:2130301-2130550-


(1)
AGO2.ip 		(11)
B-CELL 		(10)
BRAIN 		(11)
BREAST 		(19)
CELL-LINE 		(3)
CERVIX 		(8)
HEART 		(3)
HELA 		(1)
KIDNEY 		(14)
LIVER 		(2)
OTHER 		(15)
SKIN 		(1)
TESTES 		(2)
UTERUS 		(1)
XRN.ip

Sense strand
CCGCTGCCCCGCAGATGTCACACACCAAGCCCTACATCAGGAAGAAGGCTGTGCTGATCATGTACAAGGTGTTCCTGAAGTACCCCGAGTCGCTGCGCCCTGCCTTTCCCCGGCTGAAGGAGAAGCTGGAGGACCCCGACCCCGGTTTGTGGATTTGAGTTAAGCCTCAGGGTTGAGGGTGGGGGCTCAGCCGGTGCCCTGGGAAGAGGTGGTGGCGTGTTTTGGGGGGTGCTGCGGGGAGTGGTGAAGG
................................................................................................................(((.(((...(((((((.((.......))))))))).....))).)))..........................................................................................
................................................................................................................113...............................................163.....................................................................................
SizePerfect hitTotal NormPerfect NormSRR039622(GSM531985)
HCV(+) Adjacent Tissue Sample. (liver)		SRR207110(GSM721072)
Nuclear RNA. (cell line)		SRR342899(SRX096795)
small RNA seq of Left atrial tissue. (heart)		GSM450601(GSM450601)
miRNA sequencing raw reads from post-mortem s. (brain)		SRR039623(GSM531986)
HCV(+) HCC Tissue Sample. (liver)		SRR039614(GSM531977)
HBV-infected Liver Tissue. (liver)		GSM450605(GSM450605)
miRNA sequencing raw reads from post-mortem s. (brain)		SRR039620(GSM531983)
HBV(+) Adjacent Tissue Sample 2. (liver)		DRR001486(DRX001040)
"Hela long cytoplasmic cell fraction, LNA(+)". (hela)		SRR039615(GSM531978)
Severe Chronic Hepatitis B Liver Tissue. (liver)		SRR039625(GSM531988)
HBV(-) HCV(-) HCC Tissue Sample. (liver)		SRR342894(SRX096790)
small RNA seq of Right atrial tissue. (heart)		SRR039621(GSM531984)
HBV(+) HCC Tissue Sample 2. (liver)		SRR191607(GSM715717)
192genomic small RNA (size selected RNA from . (breast)		SRR039619(GSM531982)
HBV(+) HCC Tissue Sample 1. (liver)		DRR001485(DRX001039)
"Hela long total cell fraction, LNA(+)". (hela)		SRR342897(SRX096793)
small RNA seq of Left atrial tissue. (heart)		DRR000558(DRX000316)
"THP-1 whole cell RNA, after 3 day treatment . (cell line)		SRR033715(GSM497060)
Mantle Cell Lymphoma (Mino122). (B cell)		GSM450608(GSM450608)
miRNA sequencing raw reads from post-mortem s. (brain)		SRR342895(SRX096791)
small RNA seq of Left atrial tissue. (heart)		SRR189784SRR107297(GSM677704)
18-30nt fraction of small RNA. (cell line)		SRR553572(SRX182778)
source: Frontal Cortex. (Frontal Cortex)		SRR039190(GSM494809)
PBMCs were isolated by ficoll gradient from t. (blood)		SRR039612(GSM531975)
Human Normal Liver Tissue Sample 2. (liver)		SRR033727(GSM497072)
HIV-positive DL (HIV412). (B cell)		SRR189779(GSM714639)
cell line: HEK293clip variant: PAR-CLIPenzyma. (cell line)		SRR330874(SRX091712)
tissue: skin psoriatic involveddisease state:. (skin)		SRR207115(GSM721077)
XRN1&2 knockdown. (XRN1/XRN2 cell line)		SRR107296(GSM677703)
18-30nt fraction of small RNA. (cell line)		SRR342896(SRX096792)
small RNA seq of Right atrial tissue. (heart)		SRR342901(SRX096797)
small RNA seq of Left atrial tissue. (heart)		SRR039616(GSM531979)
HBV(+) Distal Tissue Sample 1. (liver)		RoviraIPAgo2(Rovira)
total RNA. (ago2 breast)		SRR033712(GSM497057)
Burkitt Lymphoma (BL510). (B cell)		SRR015359(GSM380324)
Germinal Center B cell (GC136). (B cell)		SRR330906(SRX091744)
tissue: normal skindisease state: normal. (skin)		SRR553575(SRX182781)
source: Kidney. (Kidney)		SRR326279(GSM769509)
cytoplasmic fraction was isolated using PARIS. (cell line)		SRR039617(GSM531980)
HBV(+) Adjacent Tissue Sample 1. (liver)		SRR015364(GSM380329)
Plasma B cells (PC44). (B cell)		SRR033721(GSM497066)
Ly3 cell line (Ly3). (B cell)		SRR390723(GSM850202)
total small RNA. (cell line)		SRR015448(SRR015448)
cytoplasmic small RNAs. (breast)		DRR001489(DRX001043)
"Hela short nuclear cell fraction, control". (hela)		SRR037940(GSM510478)
293cand5_rep2. (cell line)		SRR060168(GSM565978)
5-8F_nucleus. (cell line)		GSM450602(GSM450602)
miRNA sequencing raw reads from post-mortem s. (brain)		TAX577453(Rovira)
total RNA. (breast)		GSM450598(GSM450598)
miRNA sequencing raw reads from post-mortem s. (brain)		SRR330913(SRX091751)
tissue: normal skindisease state: normal. (skin)		SRR094131(GSM651907)
small RNA(18-35nt)small RNA deep sequencing o. (uterus)		TAX577579(Rovira)
total RNA. (breast)		TAX577738(Rovira)
total RNA. (breast)		GSM450606(GSM450606)
miRNA sequencing raw reads from post-mortem s. (brain)		SRR191420(GSM715530)
122genomic small RNA (size selected RNA from . (breast)		SRR033718(GSM497063)
Multiple Myeloma (U266). (B cell)		SRR330908(SRX091746)
tissue: normal skindisease state: normal. (skin)		GSM532876(GSM532876)
G547T. (cervix)		GSM450607(GSM450607)
miRNA sequencing raw reads from post-mortem s. (brain)		SRR040028(GSM532913)
G026N. (cervix)		DRR000557(DRX000315)
"THP-1 whole cell RNA, after 3 day treatment . (cell line)		SRR330863(SRX091701)
tissue: skin psoriatic involveddisease state:. (skin)		SRR039618(GSM531981)
HBV(+) Side Tissue Sample 1. (liver)		SRR330891(SRX091729)
tissue: skin psoriatic uninvolveddisease stat. (skin)		GSM532874(GSM532874)
G699T. (cervix)		SRR330897(SRX091735)
tissue: skin psoriatic uninvolveddisease stat. (skin)		SRR039192(GSM494811)
K562 cell line is derived from a CML patient . (cell line)		SRR033726(GSM497071)
Mututated CLL (CLLM633). (B cell)		SRR015447(SRR015447)
nuclear small RNAs. (breast)		SRR330919(SRX091757)
tissue: normal skindisease state: normal. (skin)		SRR330901(SRX091739)
tissue: skin psoriatic uninvolveddisease stat. (skin)		SRR039635(GSM518472)
THP1_nuc_sRNAs. (cell line)		SRR033713(GSM497058)
Burkitt Lymphoma (BL115). (B cell)		SRR553576(SRX182782)
source: Testis. (testes)		SRR330877(SRX091715)
tissue: skin psoriatic involveddisease state:. (skin)		SRR330894(SRX091732)
tissue: skin psoriatic uninvolveddisease stat. (skin)		SRR330902(SRX091740)
tissue: skin psoriatic uninvolveddisease stat. (skin)		SRR039613(GSM531976)
Human Normal Liver Tissue Sample 3. (liver)		SRR060169(GSM565979)
5-8F_cytoplasm. (cell line)		SRR326282(GSM769512)
"Dicer mRNA was knocked down using siDicer, t. (cell line)		GSM450599(GSM450599)
miRNA sequencing raw reads from post-mortem s. (brain)		SRR015360(GSM380325)
Plasma B cells (PC137). (B cell)		SRR191591(GSM715701)
53genomic small RNA (size selected RNA from t. (breast)		SRR207116(GSM721078)
Nuclear RNA. (cell line)		SRR033723(GSM497068)
L1236 cell line (L1236). (B cell)		GSM450597(GSM450597)
miRNA sequencing raw reads from post-mortem s. (brain)		SRR191601(GSM715711)
58genomic small RNA (size selected RNA from t. (breast)		SRR330916(SRX091754)
tissue: normal skindisease state: normal. (skin)		SRR330886(SRX091724)
tissue: skin psoriatic uninvolveddisease stat. (skin)		TAX577745(Rovira)
total RNA. (breast)		SRR060981(GSM569185)
Human centroblast [09-001]. (cell line)		SRR326281(GSM769511)
"Dicer mRNA was knocked down using siDicer, c. (cell line)		SRR039624(GSM531987)
HBV(-) HCV(-) Adjacent Tissue Sample. (liver)		SRR038852(GSM458535)
QF1160MB. (cell line)		SRR094132(GSM651908)
small RNA(18-35nt)small RNA deep sequencing o. (uterus)		SRR342898(SRX096794)
small RNA seq of Right atrial tissue. (heart)		SRR342900(SRX096796)
small RNA seq of Right atrial tissue. (heart)		SRR330885(SRX091723)
tissue: skin psoriatic uninvolveddisease stat. (skin)		SRR095854(SRX039177)
"miRNA were isolated from FirstChoice Human B. (brain)
..............................................................................................................................................CGGTTTGTGGATTTGAG...........................................................................................17118.0018.00-12.00---------------3.00--------------------1.00-----------------------1.00--------1.00-----------------------------
......................................AGGAAGAAGGCTGTGCTGA.................................................................................................................................................................................................19111.0011.001.00---------3.00-1.00-1.00---1.00------------1.00-----------------------------1.00-------1.00---------------------1.00---------
.......................................GGAAGAAGGCTGTGCTGATCA..............................................................................................................................................................................................21110.0010.001.00---1.002.00--------------------1.00-------------1.001.00-1.00----1.00---1.00------------------------------------------------
....................................TCAGGAAGAAGGCTGTGCT...................................................................................................................................................................................................1919.009.00--1.00--3.00-2.00-2.00----------------------------------------1.00--------------------------------------------------
........................................GAAGAAGGCTGTGCTGATCATGTACAAGGTGTTCCTGAAGTACCCCGAGTCGCTGCGCCCTGCCTTTCCCCGGCTGAAGGAGA...............................................................................................................................8317.007.00--------7.00--------------------------------------------------------------------------------------------
......................................AGGAAGAAGGCTGTGCTGAT................................................................................................................................................................................................2017.007.001.00---1.00-1.00-------1.00---1.00------------------------------1.00----1.00----------------------------------------------
.......................................GGAAGAAGGCTGTGCTGA.................................................................................................................................................................................................1815.005.00---1.00--------------1.002.00------------------------------1.00--------------------------------------------------
...................................ATCAGGAAGAAGGCTGTGCT...................................................................................................................................................................................................2015.005.00-------1.00-1.00-----------------------1.00-------------1.00----------------------------------------------1.00------
......................................AGGAAGAAGGCTGTGCTGATCA..............................................................................................................................................................................................2215.005.001.00----1.001.00--2.00-------------------------------------------------------------------------------------------
.......................................GGAAGAAGGCTGTGCTGAT................................................................................................................................................................................................1915.005.00---1.00--------------------1.00---------1.00-1.00------------1.00---------------------------------------------------
......................................AGGAAGAAGGCTGTGCTGATC...............................................................................................................................................................................................2115.005.00-----3.00----------------------------------------------------------1.00--------1.00---------------------------
.......................................GGAAGAAGGCTGTGCTGATC...............................................................................................................................................................................................2014.004.001.00-------------------------------------------------------------------------1.00---------1.00--1.00-------------
.....................................................................................................................AGGAGAAGCTGGAGGACCCC.................................................................................................................2014.004.00-------2.00--2.00------------------------------------------------------------------------------------------
.....................................CAGGAAGAAGGCTGTGCTG..................................................................................................................................................................................................1913.003.00---1.00------------------------1.00--1.00---------------------------------------------------------------------
.....................................CAGGAAGAAGGCTGTGCTGATC...............................................................................................................................................................................................2213.003.00------1.00-------------------------1.00-------1.00------------------------------------------------------------
....................................TCAGGAAGAAGGCTGTGCTGAT................................................................................................................................................................................................2213.003.00------1.001.00---------------------------------1.00-----------------------------------------------------------
.................................ACATCAGGAAGAAGGCTGTGCT...................................................................................................................................................................................................2213.003.00--------------1.00--------------2.00-----------------------------------------------------------------------
...............................CTACATCAGGAAGAAGGCTGTGCTGATC...............................................................................................................................................................................................2813.003.00--3.00--------------------------------------------------------------------------------------------------
...............................CTACATCAGGAAGAAGGCTGTGCTG..................................................................................................................................................................................................2513.003.00-----------1.00--------1.00-----------1.00--------------------------------------------------------------------
..........................................AGAAGGCTGTGCTGATCATGTA..........................................................................................................................................................................................2213.003.00--------------1.00----------------------2.00---------------------------------------------------------------
......................................AGGAAGAAGGCTGTGCTG..................................................................................................................................................................................................1823.003.001.00-----------0.50-----0.50-0.50------------0.50-------------------------------------------------------------------
.........................................AAGAAGGCTGTGCTGATCATGTACAAGGTGTTCCTGAAGTACCCCGAGTCGCTGCGT........................................................................................................................................................573.000.00---------------3.00-------------------------------------------------------------------------------------
....................................TCAGGAAGAAGGCTGTGC....................................................................................................................................................................................................1822.502.501.00--------0.50--0.50------------------------------------------------------------------------------------0.50---
...............................CTACATCAGGAAGAAGGCT........................................................................................................................................................................................................1912.002.00----2.00------------------------------------------------------------------------------------------------
..........................................AGAAGGCTGTGCTGATCATGTAC.........................................................................................................................................................................................2312.002.00-------------------------2.00---------------------------------------------------------------------------
.................................ACATCAGGAAGAAGGCTGTGCTGAT................................................................................................................................................................................................2512.002.00---1.00-------------------------------------------------------------------------------------------1.00-----
................................................................................................................GCTGAAGGAGAAGCTGGAGGACCCC.................................................................................................................2512.002.001.00-------------------------------------------------------------------1.00--------------------------------
.....................................CAGGAAGAAGGCTGTGCTGAT................................................................................................................................................................................................2112.002.00------------------------------1.00---------------------------------------------------1.00------------------
..............................................................................................................................................CGGTTTGTGGATTTGTTTT.........................................................................................192.000.00---------------------------------------1.00-----------------------------------------1.00-------------------
....................................................................................................................AAGGAGAAGCTGGAGGACCCCGACCCCGG.........................................................................................................2912.002.00----------------------------------------------2.00------------------------------------------------------
....................................................................................................................AAGGAGAAGCTGGAGGACCCCG................................................................................................................2212.002.00--------------------------2.00--------------------------------------------------------------------------
.................................ACATCAGGAAGAAGGCTGTGCTGA.................................................................................................................................................................................................2412.002.00---1.00------------1.00------------------------------------------------------------------------------------
..............................CCTACATCAGGAAGAAGGC.........................................................................................................................................................................................................1912.002.00-------------------------1.00----------------------------------------------1.00----------------------------
.................................ACATCAGGAAGAAGGCTGTGCTG..................................................................................................................................................................................................2312.002.00--1.00-----------------1.00--------------------------------------------------------------------------------
................................TACATCAGGAAGAAGGCTGTGCTG..................................................................................................................................................................................................2412.002.00--2.00--------------------------------------------------------------------------------------------------
.......................................GGAAGAAGGCTGTGCTGAAA...............................................................................................................................................................................................2012.005.00-----------------------------------2.00-----------------------------------------------------------------
................................TACATCAGGAAGAAGGCTGTGCT...................................................................................................................................................................................................2312.002.001.00-1.00--------------------------------------------------------------------------------------------------
.................................ACATCAGGAAGAAGGCTGTGCTGATCA..............................................................................................................................................................................................2712.002.00--1.00----------------------------------------------------1.00---------------------------------------------
..................................................................AGGTGTTCCTGAAGTTT.......................................................................................................................................................................172.000.00-------------------------------------------1.001.00--------------------------------------------------------
...................................ATCAGGAAGAAGGCTGTGCTGATC...............................................................................................................................................................................................2412.002.00------------------------------------------------------------1.00-------------------1.00--------------------
.................................ACATCAGGAAGAAGGCTGTGCTGATC...............................................................................................................................................................................................2612.002.001.00------------------------------------------------------------------------------1.00---------------------
........................................................................................................................AGAAGCTGGAGGACCCCGA...............................................................................................................1912.002.00------------------------------------------1.00-------------------------------------------------1.00--------
..............................................................................................................................TGGAGGACCCCGACCCCGGGGTT.....................................................................................................232.000.00---------------------------------------------------1.00------1.00------------------------------------------
...............................CTACATCAGGAAGAAGGCTGTG.....................................................................................................................................................................................................2212.002.00-----------2.00-----------------------------------------------------------------------------------------
...............................................................................................................GGCTGAAGGAGAAGCTGGAGGACCC..................................................................................................................2512.002.00----2.00------------------------------------------------------------------------------------------------
.............................................................................AAGTACCCCGAGTCGCTGCGCCCCGCC..................................................................................................................................................272.000.00---------------------------2.00-------------------------------------------------------------------------
..................................................................AGGTGTTCCTGAAGTTTTT.....................................................................................................................................................................192.000.00-------------1.00------------------------------1.00--------------------------------------------------------
....................................TCAGGAAGAAGGCTGTGCTG..................................................................................................................................................................................................2012.002.001.00------1.00---------------------------------------------------------------------------------------------
.......................................GGAAGAAGGCTGTGCTGAA................................................................................................................................................................................................1911.005.00-----------------------------------------------1.00-----------------------------------------------------
.......................................GGAAGAAGGCTGTGCTGATA...............................................................................................................................................................................................2011.005.00------------------------------1.00----------------------------------------------------------------------
......................................AGGAAGAAGGCTGTGCTGATCATG............................................................................................................................................................................................2411.001.00---1.00-------------------------------------------------------------------------------------------------
.....................................CAGGAAGAAGGCTGTGCTGATA...............................................................................................................................................................................................2211.002.001.00----------------------------------------------------------------------------------------------------
.......................ACCAAGCCCTACATCAGGAAGAAGGC.........................................................................................................................................................................................................2611.001.00------------------------------------------------------------------------------1.00----------------------
....................................................................................................................AAGGAGAAGCTGGAGGACCCCGACCCCGGGGC......................................................................................................3211.002.00---------------------------1.00-------------------------------------------------------------------------
.....................................................................................................................AGGAGAAGCTGGAGGAATG..................................................................................................................191.000.00------------------------1.00----------------------------------------------------------------------------
.....................................CAGGAAGAAGGCTGTGCTGATCATG............................................................................................................................................................................................2511.001.00----------------1.00------------------------------------------------------------------------------------
....................................................................................................................AAGGAGAAGCTGGAGGATT...................................................................................................................191.000.00-----------------------------1.00-----------------------------------------------------------------------
.................................................................AAGGTGTTCCTGAAGTTTTT.....................................................................................................................................................................201.000.00-------------1.00---------------------------------------------------------------------------------------
.......................................GGAAGAAGGCTGTGCTGATCATGT...........................................................................................................................................................................................2411.001.00----1.00------------------------------------------------------------------------------------------------
......................................AGGAAGAAGGCTGTGCTGATCATGTA..........................................................................................................................................................................................2611.001.00----------------1.00------------------------------------------------------------------------------------
...............................CTACATCAGGAAGAAGGCTGT......................................................................................................................................................................................................2111.001.00---------------------------------------------------------------------------------------------1.00-------
.....................................CAGGAAGAAGGCTGTGCTGATCATGTACAAGGT....................................................................................................................................................................................3311.001.00----------------------------------1.00------------------------------------------------------------------
......................................................................................................................GGAGAAGCTGGAGGACCC..................................................................................................................1811.001.00----------1.00------------------------------------------------------------------------------------------
................................................................................................................................GAGGACCCCGACCCCGGGGTT.....................................................................................................211.000.00---------------------------------------------------------------1.00-------------------------------------
..............................CCTACATCAGGAAGAAGGCTGTGC....................................................................................................................................................................................................2411.001.00-----------1.00-----------------------------------------------------------------------------------------
....................................TCAGGAAGAAGGCTGTATAG..................................................................................................................................................................................................201.000.00---------------------1.00-------------------------------------------------------------------------------
................................................................................................................................................................TAAGCCTCAGGGTTGTAG........................................................................181.000.00---1.00-------------------------------------------------------------------------------------------------
......................CACCAAGCCCTACATCAGGAAGAAGGCTGTG.....................................................................................................................................................................................................3111.001.00--------------------1.00--------------------------------------------------------------------------------
....................................TCAGGAAGAAGGCTGTGCTGATCA..............................................................................................................................................................................................2411.001.00-------1.00---------------------------------------------------------------------------------------------
...............................CTACATCAGGAAGAAGGCTGTA.....................................................................................................................................................................................................2211.001.00------------1.00----------------------------------------------------------------------------------------
................................TACATCAGGAAGAAGGCTGTGC....................................................................................................................................................................................................2211.001.00--1.00--------------------------------------------------------------------------------------------------
....................................................................................................................AAGGAGAAGCTGGAGGACCCCGACC.............................................................................................................2511.001.00-----------------------1.00-----------------------------------------------------------------------------
...............................................................................................................................GGAGGACCCCGACCCCTGG........................................................................................................191.000.00-----------------------------------------------------------1.00-----------------------------------------
.....................................................................................................................AGGAGAAGCTGGAGGACCCCGA...............................................................................................................2211.001.00------------1.00----------------------------------------------------------------------------------------
............................................AAGGCTGTGCTGATCATGTA..........................................................................................................................................................................................2011.001.00---------------------------------------------------------------------------1.00-------------------------
............................................................................................................................................CCCGGTTTGTGGATTCGAG...........................................................................................191.000.00---------------------------------------------1.00-------------------------------------------------------
.......................................GGAAGAAGGCTGTGCTGCT................................................................................................................................................................................................1921.001.00------------------------------------1.00----------------------------------------------------------------
...............................CTACATCAGGAAGAAGGCTGTGCTGAAA...............................................................................................................................................................................................281.000.00------------------------------------------------------------------------------------------1.00----------
............................................................................................................................................................................................................AGAGGTGGTGGCGTGTTA............................181.000.00-------------------1.00---------------------------------------------------------------------------------
.......................................GGAAGAAGGCTGTGCTAA.................................................................................................................................................................................................181.000.00------1.00----------------------------------------------------------------------------------------------
................................TACATCAGGAAGAAGGCTGTGCTGATCA..............................................................................................................................................................................................2811.001.00-----------------------------------------------------------------------------1.00-----------------------
....................................TCAGGAAGAAGGCTGTGCTGA.................................................................................................................................................................................................2111.001.00------1.00----------------------------------------------------------------------------------------------
..................................................................................................................TGAAGGAGAAGCTGGTA.......................................................................................................................171.000.00---------------------------------------1.00-------------------------------------------------------------
...................................................................................................................GAAGGAGAAGCTGGAGGACCT..................................................................................................................211.000.00------------------------------1.00----------------------------------------------------------------------
..............................CCTACATCAGGAAGAAGGCTGTGCT...................................................................................................................................................................................................2511.001.00-----------1.00-----------------------------------------------------------------------------------------
................................................................................................................GCTGAAGGAGAAGCTGGA........................................................................................................................1811.001.00------------------------1.00----------------------------------------------------------------------------
....................................................................................................................AAGGAGAAGCTGGAGGACC...................................................................................................................1921.001.00---0.50---------------0.50---------------------------------------------------------------------------------
.................................ACATCAGGAAGAAGGCTGTGCTGATCATG............................................................................................................................................................................................2911.001.001.00----------------------------------------------------------------------------------------------------
.....................................................................................................................................CCCCGACCCCGGTTTG.....................................................................................................1611.001.00----------------------------------------------------------------------------1.00------------------------
.................................................................AAGGTGTTCCTGAAGTT........................................................................................................................................................................171.000.00-------------1.00---------------------------------------------------------------------------------------
.......................................GGAAGAAGGCTGTGCTG..................................................................................................................................................................................................1721.001.00------0.50-------------------------0.50--------------------------------------------------------------------
..............................................................................................................CGGCTGAAGGAGAAGCTGGAGGACC...................................................................................................................2511.001.00-----------------------1.00-----------------------------------------------------------------------------
.........................................AAGAAGGCTGTGCTGATCATGTA..........................................................................................................................................................................................2311.001.00-------------------------------------------------------------------------------------1.00---------------
...........................................................................................................CCCCGGCTGAAGGAGAAGCTGGAGGACCCCGAC..............................................................................................................3311.001.00-------------------------------------------------------------------1.00---------------------------------
............................GCCCTACATCAGGAAGAAGGCTGTGCT...................................................................................................................................................................................................2711.001.00----1.00------------------------------------------------------------------------------------------------
.........................................AAGAAGGCTGTGCTGATCATGTACAAGGTGTTCCTGAAGTACCCCGAGTCGCTGCGG........................................................................................................................................................571.000.00---------------1.00-------------------------------------------------------------------------------------
..................................................................................................................TGAAGGAGAAGCTGGAGGACCC..................................................................................................................2211.001.00----------------------1.00------------------------------------------------------------------------------
......................................AGGAAGAAGGCTGTGCTGATT...............................................................................................................................................................................................2111.007.00---------1.00-------------------------------------------------------------------------------------------
...................ACACACCAAGCCCTAATTG....................................................................................................................................................................................................................191.000.00---------------------1.00-------------------------------------------------------------------------------
....................................TCAGGAAGAAGGCTGTGCTGATTT..............................................................................................................................................................................................2411.003.00-----------------------------------------------------------------------------------1.00-----------------
............................................................................................................................................CCCGGTTTGTGGATTTGAG...........................................................................................1911.001.00---------------------------------------------1.00-------------------------------------------------------
...............................CTACATCAGGAAGAAGGC.........................................................................................................................................................................................................1811.001.001.00----------------------------------------------------------------------------------------------------
.......................................GGAAGAAGGCTGTGCTGATGAT.............................................................................................................................................................................................2211.005.00---1.00-------------------------------------------------------------------------------------------------
.................................ACATCAGGAAGAAGGCTGTGCTGAGCA..............................................................................................................................................................................................2711.002.00------1.00----------------------------------------------------------------------------------------------
..............................................................................................................................TGGAGGACCCCGACCCCGGTTTGTGGATTTGAG...........................................................................................3311.001.00--------------------------------------1.00--------------------------------------------------------------
...............................................................................................................................GGAGGACCCCGACCCCGGGGTT.....................................................................................................221.000.00-----------------------------------------------------------------1.00-----------------------------------
.....................................CAGGAAGAAGGCTGTGCT...................................................................................................................................................................................................1811.001.00---------------------------------1.00-------------------------------------------------------------------
........................................................................................................................AGAAGCTGGAGGACCTTG................................................................................................................181.000.00------------------------------------------1.00----------------------------------------------------------
..............................................................................................................CGGCTGAAGGAGAAGCTGGAGGACA...................................................................................................................251.000.00-----------------------1.00-----------------------------------------------------------------------------
..............................CCTACATCAGGAAGAAGGCT........................................................................................................................................................................................................2011.001.00----1.00------------------------------------------------------------------------------------------------
........................................................................................................TTTCCCCGGCTGAAGGAGAAGCT...........................................................................................................................2311.001.00-----------------------------------------------------1.00-----------------------------------------------
.....................................................................TGTTCCTGAAGTACCCCGAGT................................................................................................................................................................2111.001.00----------------------------1.00------------------------------------------------------------------------
...................................................TGCTGATCATGTACAAG......................................................................................................................................................................................1721.001.00----------------------------1.00------------------------------------------------------------------------
................................TACATCAGGAAGAAGGCTGTGCTGATC...............................................................................................................................................................................................2711.001.001.00----------------------------------------------------------------------------------------------------
.................................................................AAGGTGTTCCTGAAGTTTT......................................................................................................................................................................191.000.00-------------1.00---------------------------------------------------------------------------------------
...................................................................................................................GAAGGAGAAGCTGGAGGACCC..................................................................................................................2111.001.00----------------------1.00------------------------------------------------------------------------------
.....................................CAGGAAGAAGGCTGTGCTGATCA..............................................................................................................................................................................................2311.001.00---1.00-------------------------------------------------------------------------------------------------
...................................ATCAGGAAGAAGGCTGTGCTG..................................................................................................................................................................................................2111.001.00--------------------------------------------------------------------------------------1.00--------------
.................................................................................................................................AGGACCCCGACCCCGGGGTT.....................................................................................................201.000.00-----------------------------------------------------------------------------------------1.00-----------
...................................ATCAGGAAGAAGGCTGTGC....................................................................................................................................................................................................1911.001.001.00----------------------------------------------------------------------------------------------------
........................................GAAGAAGGCTGTGCTGATC...............................................................................................................................................................................................1911.001.00------------------------------------------------------------------1.00----------------------------------
..................................CATCAGGAAGAAGGCTGTGCTGAT................................................................................................................................................................................................2411.001.00--1.00--------------------------------------------------------------------------------------------------
.................................ACATCAGGAAGAAGGCTGTG.....................................................................................................................................................................................................2011.001.00---------------------------------------------------------1.00-------------------------------------------
...................................................................................................CTGCCTTTCCCCGGCTGG.....................................................................................................................................181.000.00----------------------------------------------------------------------------------------1.00------------
...........................................................................TGAAGTACCCCGAGTCGCTGCGCC.......................................................................................................................................................2411.001.001.00----------------------------------------------------------------------------------------------------
.....................................................................................................................AGGAGAAGCTGGAGGACCC..................................................................................................................1911.001.00--------------------------------------------------------1.00--------------------------------------------
.......................................GGAAGAAGGCTGTGCTGATCATG............................................................................................................................................................................................2311.001.00------1.00----------------------------------------------------------------------------------------------
...................................................................................CCCGAGTCGCTGCGCCCTGC...................................................................................................................................................2011.001.00-------------------------------1.00---------------------------------------------------------------------
................................................................................................................GCTGAAGGAGAAGCTGGAGGACCCT.................................................................................................................251.000.00----------------------1.00------------------------------------------------------------------------------
.......................................GGAAGAAGGCTGTGCTGATCAT.............................................................................................................................................................................................2211.001.00------------------------------------------------1.00----------------------------------------------------
...............................CTACATCAGGAAGAAGGCTG.......................................................................................................................................................................................................2011.001.00----------------------------------------------------------------------1.00------------------------------
....................................TCAGGAAGAAGGCTGTG.....................................................................................................................................................................................................1740.750.75--0.25-------------0.25------------------------------------0.25-----------------------------------------------
......................................AGGAAGAAGGCTGTGCT...................................................................................................................................................................................................1730.670.67----------------0.33-----------------------------------0.33------------------------------------------------
............................................................TGTACAAGGTGTTCCTG.............................................................................................................................................................................1720.500.50-----------------0.50-----------------------------------------------------------------------------------
.................................ACATCAGGAAGAAGGCT........................................................................................................................................................................................................1720.500.50------------------------------------------------------------------------------------------------0.50----
.............................CCCTACATCAGGAAGAAG...........................................................................................................................................................................................................1820.500.50----0.50------------------------------------------------------------------------------------------------
.............................CCCTACATCAGGAAGAAGG..........................................................................................................................................................................................................1920.500.50-------0.50---------------------------------------------------------------------------------------------
..............................................................................................................CGGCTGAAGGAGAAGCT...........................................................................................................................1720.500.50------0.50----------------------------------------------------------------------------------------------
.............................................................................................................................CTGGAGGACCCCGAC..............................................................................................................1530.330.33---------------------------------------------------------------------------------------------------0.33-
....................................................................................................................AAGGAGAAGCTGGAGGAC....................................................................................................................1830.330.33--------------------------------------------------------------------------------------------------0.33--
..............................................................................................................CGGCTGAAGGAGAAGC............................................................................................................................1630.330.33---------------------------------------------------0.33-------------------------------------------------
.....................................CAGGAAGAAGGCTGTGC....................................................................................................................................................................................................1730.330.33--------------------------------0.33--------------------------------------------------------------------
....................................TCAGGAAGAAGGCTGTGGGGT.................................................................................................................................................................................................2140.250.75------------------------------------------------------0.25----------------------------------------------
........................................GAAGAAGGCTGTGCTG..................................................................................................................................................................................................1650.200.20--0.20--------------------------------------------------------------------------------------------------
.....................................................................................................................AGGAGAAGCTGGAGGAC....................................................................................................................1770.140.14---0.14-------------------------------------------------------------------------------------------------
......................................AGGAAGAAGGCTGTGC....................................................................................................................................................................................................1680.120.12--------------------------------------------------------------------------------------------------0.12--
..............................................................................................................CGGCTGAAGGAGAAG.............................................................................................................................1580.120.12----------------------------------------------------------------------------------------------------0.12

Antisense strand
CCGCTGCCCCGCAGATGTCACACACCAAGCCCTACATCAGGAAGAAGGCTGTGCTGATCATGTACAAGGTGTTCCTGAAGTACCCCGAGTCGCTGCGCCCTGCCTTTCCCCGGCTGAAGGAGAAGCTGGAGGACCCCGACCCCGGTTTGTGGATTTGAGTTAAGCCTCAGGGTTGAGGGTGGGGGCTCAGCCGGTGCCCTGGGAAGAGGTGGTGGCGTGTTTTGGGGGGTGCTGCGGGGAGTGGTGAAGG
................................................................................................................(((.(((...(((((((.((.......))))))))).....))).)))..........................................................................................
................................................................................................................113...............................................163.....................................................................................
SizePerfect hitTotal NormPerfect NormSRR039622(GSM531985)
HCV(+) Adjacent Tissue Sample. (liver)		SRR207110(GSM721072)
Nuclear RNA. (cell line)		SRR342899(SRX096795)
small RNA seq of Left atrial tissue. (heart)		GSM450601(GSM450601)
miRNA sequencing raw reads from post-mortem s. (brain)		SRR039623(GSM531986)
HCV(+) HCC Tissue Sample. (liver)		SRR039614(GSM531977)
HBV-infected Liver Tissue. (liver)		GSM450605(GSM450605)
miRNA sequencing raw reads from post-mortem s. (brain)		SRR039620(GSM531983)
HBV(+) Adjacent Tissue Sample 2. (liver)		DRR001486(DRX001040)
"Hela long cytoplasmic cell fraction, LNA(+)". (hela)		SRR039615(GSM531978)
Severe Chronic Hepatitis B Liver Tissue. (liver)		SRR039625(GSM531988)
HBV(-) HCV(-) HCC Tissue Sample. (liver)		SRR342894(SRX096790)
small RNA seq of Right atrial tissue. (heart)		SRR039621(GSM531984)
HBV(+) HCC Tissue Sample 2. (liver)		SRR191607(GSM715717)
192genomic small RNA (size selected RNA from . (breast)		SRR039619(GSM531982)
HBV(+) HCC Tissue Sample 1. (liver)		DRR001485(DRX001039)
"Hela long total cell fraction, LNA(+)". (hela)		SRR342897(SRX096793)
small RNA seq of Left atrial tissue. (heart)		DRR000558(DRX000316)
"THP-1 whole cell RNA, after 3 day treatment . (cell line)		SRR033715(GSM497060)
Mantle Cell Lymphoma (Mino122). (B cell)		GSM450608(GSM450608)
miRNA sequencing raw reads from post-mortem s. (brain)		SRR342895(SRX096791)
small RNA seq of Left atrial tissue. (heart)		SRR189784SRR107297(GSM677704)
18-30nt fraction of small RNA. (cell line)		SRR553572(SRX182778)
source: Frontal Cortex. (Frontal Cortex)		SRR039190(GSM494809)
PBMCs were isolated by ficoll gradient from t. (blood)		SRR039612(GSM531975)
Human Normal Liver Tissue Sample 2. (liver)		SRR033727(GSM497072)
HIV-positive DL (HIV412). (B cell)		SRR189779(GSM714639)
cell line: HEK293clip variant: PAR-CLIPenzyma. (cell line)		SRR330874(SRX091712)
tissue: skin psoriatic involveddisease state:. (skin)		SRR207115(GSM721077)
XRN1&2 knockdown. (XRN1/XRN2 cell line)		SRR107296(GSM677703)
18-30nt fraction of small RNA. (cell line)		SRR342896(SRX096792)
small RNA seq of Right atrial tissue. (heart)		SRR342901(SRX096797)
small RNA seq of Left atrial tissue. (heart)		SRR039616(GSM531979)
HBV(+) Distal Tissue Sample 1. (liver)		RoviraIPAgo2(Rovira)
total RNA. (ago2 breast)		SRR033712(GSM497057)
Burkitt Lymphoma (BL510). (B cell)		SRR015359(GSM380324)
Germinal Center B cell (GC136). (B cell)		SRR330906(SRX091744)
tissue: normal skindisease state: normal. (skin)		SRR553575(SRX182781)
source: Kidney. (Kidney)		SRR326279(GSM769509)
cytoplasmic fraction was isolated using PARIS. (cell line)		SRR039617(GSM531980)
HBV(+) Adjacent Tissue Sample 1. (liver)		SRR015364(GSM380329)
Plasma B cells (PC44). (B cell)		SRR033721(GSM497066)
Ly3 cell line (Ly3). (B cell)		SRR390723(GSM850202)
total small RNA. (cell line)		SRR015448(SRR015448)
cytoplasmic small RNAs. (breast)		DRR001489(DRX001043)
"Hela short nuclear cell fraction, control". (hela)		SRR037940(GSM510478)
293cand5_rep2. (cell line)		SRR060168(GSM565978)
5-8F_nucleus. (cell line)		GSM450602(GSM450602)
miRNA sequencing raw reads from post-mortem s. (brain)		TAX577453(Rovira)
total RNA. (breast)		GSM450598(GSM450598)
miRNA sequencing raw reads from post-mortem s. (brain)		SRR330913(SRX091751)
tissue: normal skindisease state: normal. (skin)		SRR094131(GSM651907)
small RNA(18-35nt)small RNA deep sequencing o. (uterus)		TAX577579(Rovira)
total RNA. (breast)		TAX577738(Rovira)
total RNA. (breast)		GSM450606(GSM450606)
miRNA sequencing raw reads from post-mortem s. (brain)		SRR191420(GSM715530)
122genomic small RNA (size selected RNA from . (breast)		SRR033718(GSM497063)
Multiple Myeloma (U266). (B cell)		SRR330908(SRX091746)
tissue: normal skindisease state: normal. (skin)		GSM532876(GSM532876)
G547T. (cervix)		GSM450607(GSM450607)
miRNA sequencing raw reads from post-mortem s. (brain)		SRR040028(GSM532913)
G026N. (cervix)		DRR000557(DRX000315)
"THP-1 whole cell RNA, after 3 day treatment . (cell line)		SRR330863(SRX091701)
tissue: skin psoriatic involveddisease state:. (skin)		SRR039618(GSM531981)
HBV(+) Side Tissue Sample 1. (liver)		SRR330891(SRX091729)
tissue: skin psoriatic uninvolveddisease stat. (skin)		GSM532874(GSM532874)
G699T. (cervix)		SRR330897(SRX091735)
tissue: skin psoriatic uninvolveddisease stat. (skin)		SRR039192(GSM494811)
K562 cell line is derived from a CML patient . (cell line)		SRR033726(GSM497071)
Mututated CLL (CLLM633). (B cell)		SRR015447(SRR015447)
nuclear small RNAs. (breast)		SRR330919(SRX091757)
tissue: normal skindisease state: normal. (skin)		SRR330901(SRX091739)
tissue: skin psoriatic uninvolveddisease stat. (skin)		SRR039635(GSM518472)
THP1_nuc_sRNAs. (cell line)		SRR033713(GSM497058)
Burkitt Lymphoma (BL115). (B cell)		SRR553576(SRX182782)
source: Testis. (testes)		SRR330877(SRX091715)
tissue: skin psoriatic involveddisease state:. (skin)		SRR330894(SRX091732)
tissue: skin psoriatic uninvolveddisease stat. (skin)		SRR330902(SRX091740)
tissue: skin psoriatic uninvolveddisease stat. (skin)		SRR039613(GSM531976)
Human Normal Liver Tissue Sample 3. (liver)		SRR060169(GSM565979)
5-8F_cytoplasm. (cell line)		SRR326282(GSM769512)
"Dicer mRNA was knocked down using siDicer, t. (cell line)		GSM450599(GSM450599)
miRNA sequencing raw reads from post-mortem s. (brain)		SRR015360(GSM380325)
Plasma B cells (PC137). (B cell)		SRR191591(GSM715701)
53genomic small RNA (size selected RNA from t. (breast)		SRR207116(GSM721078)
Nuclear RNA. (cell line)		SRR033723(GSM497068)
L1236 cell line (L1236). (B cell)		GSM450597(GSM450597)
miRNA sequencing raw reads from post-mortem s. (brain)		SRR191601(GSM715711)
58genomic small RNA (size selected RNA from t. (breast)		SRR330916(SRX091754)
tissue: normal skindisease state: normal. (skin)		SRR330886(SRX091724)
tissue: skin psoriatic uninvolveddisease stat. (skin)		TAX577745(Rovira)
total RNA. (breast)		SRR060981(GSM569185)
Human centroblast [09-001]. (cell line)		SRR326281(GSM769511)
"Dicer mRNA was knocked down using siDicer, c. (cell line)		SRR039624(GSM531987)
HBV(-) HCV(-) Adjacent Tissue Sample. (liver)		SRR038852(GSM458535)
QF1160MB. (cell line)		SRR094132(GSM651908)
small RNA(18-35nt)small RNA deep sequencing o. (uterus)		SRR342898(SRX096794)
small RNA seq of Right atrial tissue. (heart)		SRR342900(SRX096796)
small RNA seq of Right atrial tissue. (heart)		SRR330885(SRX091723)
tissue: skin psoriatic uninvolveddisease stat. (skin)		SRR095854(SRX039177)
"miRNA were isolated from FirstChoice Human B. (brain)
..................................................................................................................................................TTGTGGATTTGAGTTTCCG..................................................................................... 191.000.00---------------------1.00-------------------------------------------------------------------------------