ID: uc002lua.3_intron_13_0_chr19_1825943_r.3p
GENE: (2)
chr19:1825893-1826142-


(1)
B-CELL 		(7)
BRAIN 		(12)
BREAST 		(5)
CELL-LINE 		(3)
CERVIX 		(2)
LIVER 		(1)
OTHER 		(4)
SKIN 		(3)
UTERUS

Sense strand
TCTGCAGAACGTGTGACACCTGCCCACCCCTCCGACTGCACCCACACAAAGCCCAGGGACTGTTGGCCCTGAGCCCTCAGCTGCTGTGCCTGGGGGCTGGACTGTTCCATTCCCCACTTGCCGGGGGCAGTTTGAGGTTGGGGTGTGTTGGTGTTGGCAGCGAGGGCAGACCTGTGCTGACGGACGGACATGTGTCTTAGCCCCCCAAGGAAGAGAAGAGTGAGGAGAAGGGGCTTTCGGGTCTGACCAC
.................................................................................................................................(((((.(((..((((.((((..(((.....)))..)))).))))..)))..))))).(((....)))......................................................
...............................................................................................................................128.....................................................................200................................................
SizePerfect hitTotal NormPerfect NormTAX577580(Rovira)
total RNA. (breast)		SRR029054(GSM402329)
MCF7_smallRNAseq. (cell line)		SRR037937(GSM510475)
293cand2. (cell line)		GSM450601(GSM450601)
miRNA sequencing raw reads from post-mortem s. (brain)		TAX577590(Rovira)
total RNA. (breast)		TAX577742(Rovira)
total RNA. (breast)		TAX577579(Rovira)
total RNA. (breast)		GSM450600(GSM450600)
miRNA sequencing raw reads from post-mortem s. (brain)		TAX577743(Rovira)
total RNA. (breast)		SRR094129(GSM651905)
small RNA(18-35nt)small RNA deep sequencing o. (uterus)		TAX577746(Rovira)
total RNA. (breast)		SRR553572(SRX182778)
source: Frontal Cortex. (Frontal Cortex)		GSM450609(GSM450609)
miRNA sequencing raw reads from post-mortem s. (brain)		TAX577741(Rovira)
total RNA. (breast)		SRR330877(SRX091715)
tissue: skin psoriatic involveddisease state:. (skin)		GSM450605(GSM450605)
miRNA sequencing raw reads from post-mortem s. (brain)		SRR094131(GSM651907)
small RNA(18-35nt)small RNA deep sequencing o. (uterus)		SRR189784GSM450606(GSM450606)
miRNA sequencing raw reads from post-mortem s. (brain)		SRR040040(GSM532925)
G612N. (cervix)		TAX577588(Rovira)
total RNA. (breast)		SRR094130(GSM651906)
small RNA(18-35nt)small RNA deep sequencing o. (uterus)		SRR033717(GSM497062)
Mentle Cell Lymphoma (MCL112). (B cell)		SRR330890(SRX091728)
tissue: skin psoriatic uninvolveddisease stat. (skin)		SRR330864(SRX091702)
tissue: skin psoriatic involveddisease state:. (skin)		SRR189782TAX577739(Rovira)
total RNA. (breast)		GSM450603(GSM450603)
miRNA sequencing raw reads from post-mortem s. (brain)		SRR189779(GSM714639)
cell line: HEK293clip variant: PAR-CLIPenzyma. (cell line)		SRR015447(SRR015447)
nuclear small RNAs. (breast)		SRR189780(GSM714640)
cell line: HEK293clip variant: PAR-CLIPenzyma. (cell line)		GSM450610(GSM450610)
miRNA sequencing raw reads from post-mortem s. (brain)		SRR040038(GSM532923)
G531N. (cervix)		SRR189786SRR039613(GSM531976)
Human Normal Liver Tissue Sample 3. (liver)		TAX577589(Rovira)
total RNA. (breast)		TAX577453(Rovira)
total RNA. (breast)		SRR326280(GSM769510)
total cell content of unperturbed cells was s. (cell line)		SRR040035(GSM532920)
G001T. (cervix)		SRR330886(SRX091724)
tissue: skin psoriatic uninvolveddisease stat. (skin)		SRR039623(GSM531986)
HCV(+) HCC Tissue Sample. (liver)
....................................................................................................................................TGAGGTTGGGGTGTGTGGTT..................................................................................................2010.000.002.002.00--1.001.00------1.00-------------1.00--------1.001.00----
....................................................................................................................................TGAGGTTGGGGTGTGTAGTT..................................................................................................208.000.001.003.00-2.00-----------------1.00-----------1.00-------
....................................................................................................................................TGAGGTTGGGGTGTGTAGTG..................................................................................................206.000.001.00--------1.001.00--1.00--1.00--------------1.00---------
....................................................................................................................................TGAGGTTGGGGTGTGTGGTG..................................................................................................204.000.001.00----1.00-1.00-------1.00-------------------------
....................................................................................................................................TGAGGTTGGGGTGTGTATTT..................................................................................................203.000.00-1.00-1.00---1.00---------------------------------
....................................................................................................................................TGAGGTTGGGGTGTGTGGG...................................................................................................193.000.00------1.00-1.001.00-------------------------------
....................................................................................................................................TGAGGTTGGGGTGTGTGTTT..................................................................................................202.000.001.00-----1.00----------------------------------
............................................CACAAAGCCCAGGGACTGT...........................................................................................................................................................................................1912.002.00--------------1.00--------1.00-----------------
....................................................................................................................................................................................CGGACGGACATGTGTCTTAG..................................................2012.002.00--1.00-----1.00--------------------------------
..............................................................................................................................................................................TGCTGACGGACGGACATGTGTCTTA...................................................2512.002.00--2.00--------------------------------------
..................................................................................................................................................................................................................AAGAGAAGAGTGAGGAGAAGGGGCCC..............261.000.00----------------------------1.00------------
....................................................................................................................................TGAGGTTGGGGTGTGTATAG..................................................................................................201.000.00-1.00---------------------------------------
............................................................................................................................................GGGTGTGTTGGTGTTGGCAAAG........................................................................................221.000.00-------------------------1.00---------------
....................................................................................................................................TGAGGTTGGGGTGTGTAGT...................................................................................................191.000.00------------------1.00----------------------
....................................................................................................................................TGAGGTTGGGGTGTGTATAT..................................................................................................201.000.00------------1.00----------------------------
....................................................................................................................................TGAGGTTGGGGTGTGTGT....................................................................................................181.000.001.00----------------------------------------
..................................................................................................GGACTGTTCCATTCCATTC.....................................................................................................................................191.000.00--------------------------------------1.00--
....................................................................................................................................TGAGGTTGGGGTGTGTGGGG..................................................................................................201.000.001.00----------------------------------------
..............................................................................................................................................................................................................AAGGAAGAGAAGAGTGAGGAA.......................211.000.00-----------------------------1.00-----------
...............................................................................................................................................................................GCTGACGGACGGACATGTGTCT.....................................................2211.001.00-------------1.00---------------------------
...........................................................................CTCAGCTGCTGTGCCTGG.............................................................................................................................................................1811.001.00---------------------------------------1.00-
....................................................................................................................................TGAGGTTGGGGTGTGTCT....................................................................................................181.000.00----1.00------------------------------------
....................................................................................................................................TGAGGTTGGGGTGTGTGG....................................................................................................181.000.00----------1.00------------------------------
....................................................................................................................................TGAGGTTGGGGTGTGTGGAT..................................................................................................201.000.00-----1.00-----------------------------------
........................................................................................................................................................................................................................AGAGTGAGGAGAAGGCATA...............191.000.00----------------------------------------1.00
..........................................................................................................................................................................CCTGTGCTGACGGACGGACATGTGT.......................................................2511.001.00----------------------1.00------------------
..............................................................................................................................................................................................................AAGGAAGAGAAGAGTGAGGAGAA.....................2311.001.00----------------------------------1.00------
....................................................................................................................................TGAGGTTGGGGTGTGTGGAA..................................................................................................201.000.00--------1.00--------------------------------
....................................................................................................................................TGAGGTTGGGGTGTGTGGAG..................................................................................................201.000.00---------------------------1.00-------------
..............................................................................................................................................................................................................AAGGAAGAGAAGAGTGAGGAGAAGGGGCTT..............3011.001.00-----------1.00-----------------------------
...............................................................................................................................................................................................................................GGAGAAGGGGCTTTCGGGTCTGAC...2411.001.00--------------1.00--------------------------
....................................................................................................................................TGAGGTTGGGGTGTGTATAC..................................................................................................201.000.00----1.00------------------------------------
...................................................................................................................................................TTGGTGTTGGCAGCGAGGGCAGACCTGTGCTG.......................................................................3211.001.00-----------1.00-----------------------------
................................................................................................................................................GTGTTGGTGTTGGCAGCGAG......................................................................................2011.001.00------------------------1.00----------------
....................................................................................................................................TGAGGTTGGGGTGTGTAG....................................................................................................181.000.001.00----------------------------------------
.......................................................................................................................................................................................................GCCCCCCAAGGAAGAGCC.................................181.000.00--------------------------------1.00--------
.................................................................................................................................................................................................................................AGAAGGGGCTTTCGGGTCTGACCAC2511.001.00---------------1.00-------------------------
....................................................................................................................................TGAGGTTGGGGTGTGAGGG...................................................................................................191.000.00-1.00---------------------------------------
....................................................................................................................................TGAGGTTGGGGTGTGTAGAT..................................................................................................201.000.00-------------------------------------1.00---
......................................................................................TGCCTGGGGGCTGGACTGTTC...............................................................................................................................................2120.500.50--0.50--------------------------------------
.....................................................................................................................................GAGGTTGGGGTGTGTTG....................................................................................................1720.500.50----------------0.50------------------------

Antisense strand
TCTGCAGAACGTGTGACACCTGCCCACCCCTCCGACTGCACCCACACAAAGCCCAGGGACTGTTGGCCCTGAGCCCTCAGCTGCTGTGCCTGGGGGCTGGACTGTTCCATTCCCCACTTGCCGGGGGCAGTTTGAGGTTGGGGTGTGTTGGTGTTGGCAGCGAGGGCAGACCTGTGCTGACGGACGGACATGTGTCTTAGCCCCCCAAGGAAGAGAAGAGTGAGGAGAAGGGGCTTTCGGGTCTGACCAC
.................................................................................................................................(((((.(((..((((.((((..(((.....)))..)))).))))..)))..))))).(((....)))......................................................
...............................................................................................................................128.....................................................................200................................................
SizePerfect hitTotal NormPerfect NormTAX577580(Rovira)
total RNA. (breast)		SRR029054(GSM402329)
MCF7_smallRNAseq. (cell line)		SRR037937(GSM510475)
293cand2. (cell line)		GSM450601(GSM450601)
miRNA sequencing raw reads from post-mortem s. (brain)		TAX577590(Rovira)
total RNA. (breast)		TAX577742(Rovira)
total RNA. (breast)		TAX577579(Rovira)
total RNA. (breast)		GSM450600(GSM450600)
miRNA sequencing raw reads from post-mortem s. (brain)		TAX577743(Rovira)
total RNA. (breast)		SRR094129(GSM651905)
small RNA(18-35nt)small RNA deep sequencing o. (uterus)		TAX577746(Rovira)
total RNA. (breast)		SRR553572(SRX182778)
source: Frontal Cortex. (Frontal Cortex)		GSM450609(GSM450609)
miRNA sequencing raw reads from post-mortem s. (brain)		TAX577741(Rovira)
total RNA. (breast)		SRR330877(SRX091715)
tissue: skin psoriatic involveddisease state:. (skin)		GSM450605(GSM450605)
miRNA sequencing raw reads from post-mortem s. (brain)		SRR094131(GSM651907)
small RNA(18-35nt)small RNA deep sequencing o. (uterus)		SRR189784GSM450606(GSM450606)
miRNA sequencing raw reads from post-mortem s. (brain)		SRR040040(GSM532925)
G612N. (cervix)		TAX577588(Rovira)
total RNA. (breast)		SRR094130(GSM651906)
small RNA(18-35nt)small RNA deep sequencing o. (uterus)		SRR033717(GSM497062)
Mentle Cell Lymphoma (MCL112). (B cell)		SRR330890(SRX091728)
tissue: skin psoriatic uninvolveddisease stat. (skin)		SRR330864(SRX091702)
tissue: skin psoriatic involveddisease state:. (skin)		SRR189782TAX577739(Rovira)
total RNA. (breast)		GSM450603(GSM450603)
miRNA sequencing raw reads from post-mortem s. (brain)		SRR189779(GSM714639)
cell line: HEK293clip variant: PAR-CLIPenzyma. (cell line)		SRR015447(SRR015447)
nuclear small RNAs. (breast)		SRR189780(GSM714640)
cell line: HEK293clip variant: PAR-CLIPenzyma. (cell line)		GSM450610(GSM450610)
miRNA sequencing raw reads from post-mortem s. (brain)		SRR040038(GSM532923)
G531N. (cervix)		SRR189786SRR039613(GSM531976)
Human Normal Liver Tissue Sample 3. (liver)		TAX577589(Rovira)
total RNA. (breast)		TAX577453(Rovira)
total RNA. (breast)		SRR326280(GSM769510)
total cell content of unperturbed cells was s. (cell line)		SRR040035(GSM532920)
G001T. (cervix)		SRR330886(SRX091724)
tissue: skin psoriatic uninvolveddisease stat. (skin)		SRR039623(GSM531986)
HCV(+) HCC Tissue Sample. (liver)
............................................................................TCAGCTGCTGTGCCTGGTCTG......................................................................................................................................................... 211.000.00--------------------1.00--------------------
.......................................................................AGCCCTCAGCTGCTGTGGCC............................................................................................................................................................... 201.000.00------------------------------1.00----------
.............................................ACAAAGCCCAGGGACCATC.......................................................................................................................................................................................... 191.000.00-------------------1.00---------------------
......................................................................................................................TGCCGGGGGCAGTTTGACTTT............................................................................................................... 211.000.00-------1.00---------------------------------
............................................................................................................................................GGGTGTGTTGGTGTTATG............................................................................................ 181.000.00-----------------1.00-----------------------
........................................................................................................................................................................................................................AGAGTGAGGAGAAGGGGATCA............. 211.000.00------1.00----------------------------------