ID: uc002lrj.3_intron_6_0_chr19_1110888_r
GENE: (22)
chr19:1110838-1111067-


(1)
AGO1.ip 		(1)
AGO2.ip 		(1)
AGO3.ip 		(11)
B-CELL 		(1)
BRAIN 		(13)
BREAST 		(25)
CELL-LINE 		(2)
CERVIX 		(2)
FIBROBLAST 		(2)
HEART 		(2)
HELA 		(7)
LIVER 		(3)
OTHER 		(37)
SKIN 		(2)
UTERUS 		(1)
XRN.ip

Sense strand
GGGCATTGGTGGCCGGGAGTCCCGGAATGGCTGCCTGGACGTGGAGAAGGGTGAGTGCCCCACACCCAGGCCCAGAGGCGCTCCTGTCTCTCATCTCATGCAACCTTGGCCTCGGGTGGTGAGCAAAGCAGGGAGAGGGATTCCCAGCGCAGCCTGAGGCTTGGCTCCCTCCCCTACCAGACTGTTCCATCACCAAGTTCCTGAACCGCATCCTGGGGCTGGAGGTGCAC
.................................................................................................................................((((.((((((...(((....((((...))))))).)))))))))).......................................................
...........................................................................................................................124.....................................................180................................................
SizePerfect hitTotal NormPerfect NormDRR001486(DRX001040)
"Hela long cytoplasmic cell fraction, LNA(+)". (hela)		SRR207110(GSM721072)
Nuclear RNA. (cell line)		SRR189785SRR314796(SRX084354)
"Total RNA, fractionated (15-30nt)". (cell line)		SRR037944(GSM510482)
293DcrTN_cand5. (cell line)		SRR330885(SRX091723)
tissue: skin psoriatic uninvolveddisease stat. (skin)		SRR207115(GSM721077)
XRN1&2 knockdown. (XRN1/XRN2 cell line)		SRR189782SRR189784SRR444050(SRX128898)
Sample 10cDNABarcode: AF-PP-335: ACG CTC TTC . (skin)		SRR330899(SRX091737)
tissue: skin psoriatic uninvolveddisease stat. (skin)		SRR039623(GSM531986)
HCV(+) HCC Tissue Sample. (liver)		SRR330874(SRX091712)
tissue: skin psoriatic involveddisease state:. (skin)		SRR039621(GSM531984)
HBV(+) HCC Tissue Sample 2. (liver)		SRR189779(GSM714639)
cell line: HEK293clip variant: PAR-CLIPenzyma. (cell line)		SRR387909(GSM843861)
specific-host: Homo sapienshost cell line: Su. (cell line)		SRR107297(GSM677704)
18-30nt fraction of small RNA. (cell line)		SRR330907(SRX091745)
tissue: normal skindisease state: normal. (skin)		SRR330872(SRX091710)
tissue: skin psoriatic involveddisease state:. (skin)		SRR330873(SRX091711)
tissue: skin psoriatic involveddisease state:. (skin)		SRR330863(SRX091701)
tissue: skin psoriatic involveddisease state:. (skin)		SRR330898(SRX091736)
tissue: skin psoriatic uninvolveddisease stat. (skin)		SRR342901(SRX096797)
small RNA seq of Left atrial tissue. (heart)		SRR330904(SRX091742)
tissue: normal skindisease state: normal. (skin)		SRR015364(GSM380329)
Plasma B cells (PC44). (B cell)		SRR330884(SRX091722)
tissue: skin psoriatic uninvolveddisease stat. (skin)		SRR330901(SRX091739)
tissue: skin psoriatic uninvolveddisease stat. (skin)		SRR191548(GSM715658)
101genomic small RNA (size selected RNA from . (breast)		SRR343335SRR330870(SRX091708)
tissue: skin psoriatic involveddisease state:. (skin)		SRR015360(GSM380325)
Plasma B cells (PC137). (B cell)		SRR033723(GSM497068)
L1236 cell line (L1236). (B cell)		SRR553572(SRX182778)
source: Frontal Cortex. (Frontal Cortex)		SRR330867(SRX091705)
tissue: skin psoriatic involveddisease state:. (skin)		SRR039616(GSM531979)
HBV(+) Distal Tissue Sample 1. (liver)		SRR330864(SRX091702)
tissue: skin psoriatic involveddisease state:. (skin)		SRR330861(SRX091699)
tissue: skin psoriatic involveddisease state:. (skin)		SRR330877(SRX091715)
tissue: skin psoriatic involveddisease state:. (skin)		SRR330869(SRX091707)
tissue: skin psoriatic involveddisease state:. (skin)		SRR330878(SRX091716)
tissue: skin psoriatic involveddisease state:. (skin)		SRR330862(SRX091700)
tissue: skin psoriatic involveddisease state:. (skin)		SRR330902(SRX091740)
tissue: skin psoriatic uninvolveddisease stat. (skin)		SRR326279(GSM769509)
cytoplasmic fraction was isolated using PARIS. (cell line)		RoviraIPAgo2(Rovira)
total RNA. (ago2 breast)		SRR343334SRR191420(GSM715530)
122genomic small RNA (size selected RNA from . (breast)		SRR330912(SRX091750)
tissue: normal skindisease state: normal. (skin)		SRR037936(GSM510474)
293cand1. (cell line)		SRR039191(GSM494810)
PBMCs were isolated by ficoll gradient from t. (blood)		SRR330857(SRX091695)
tissue: skin psoriatic involveddisease state:. (skin)		SRR033722(GSM497067)
KMS12 cell line (KMS12). (B cell)		SRR040010(GSM532895)
G529N. (cervix)		DRR000562(DRX000320)
Isolation of RNA following immunoprecipitatio. (ago3 cell line)		SRR039625(GSM531988)
HBV(-) HCV(-) HCC Tissue Sample. (liver)		SRR039620(GSM531983)
HBV(+) Adjacent Tissue Sample 2. (liver)		SRR191603(GSM715713)
71genomic small RNA (size selected RNA from t. (breast)		SRR094130(GSM651906)
small RNA(18-35nt)small RNA deep sequencing o. (uterus)		SRR207113(GSM721075)
IP against AGO 1 & 2. (ago1/2 cell line)		SRR191607(GSM715717)
192genomic small RNA (size selected RNA from . (breast)		SRR037937(GSM510475)
293cand2. (cell line)		SRR191621(GSM715731)
16genomic small RNA (size selected RNA from t. (breast)		SRR015358(GSM380323)
NaÌøve B Cell (Naive39). (B cell)		SRR039617(GSM531980)
HBV(+) Adjacent Tissue Sample 1. (liver)		SRR363675(GSM830252)
cell type: human foreskin fibroblasts (HFF)tr. (fibroblast)		SRR040025(GSM532910)
G613T. (cervix)		SRR189780(GSM714640)
cell line: HEK293clip variant: PAR-CLIPenzyma. (cell line)		SRR191597(GSM715707)
75genomic small RNA (size selected RNA from t. (breast)		SRR330871(SRX091709)
tissue: skin psoriatic involveddisease state:. (skin)		TAX577742(Rovira)
total RNA. (breast)		SRR029126(GSM416755)
143B. (cell line)		SRR330868(SRX091706)
tissue: skin psoriatic involveddisease state:. (skin)		TAX577579(Rovira)
total RNA. (breast)		GSM450600(GSM450600)
miRNA sequencing raw reads from post-mortem s. (brain)		SRR039622(GSM531985)
HCV(+) Adjacent Tissue Sample. (liver)		SRR326282(GSM769512)
"Dicer mRNA was knocked down using siDicer, t. (cell line)		TAX577738(Rovira)
total RNA. (breast)		SRR363673(GSM830250)
cell type: human foreskin fibroblasts (HFF)tr. (fibroblast)		SRR207116(GSM721078)
Nuclear RNA. (cell line)		SRR326280(GSM769510)
total cell content of unperturbed cells was s. (cell line)		SRR015361(GSM380326)
Memory B cells (MM55). (B cell)		SRR189778(GSM714638)
cell line: HEK293clip variant: PAR-CLIPenzyma. (cell line)		SRR330916(SRX091754)
tissue: normal skindisease state: normal. (skin)		SRR033729(GSM497074)
splenic MZL (Splenic414). (B cell)		SRR060981(GSM569185)
Human centroblast [09-001]. (cell line)		TAX577743(Rovira)
total RNA. (breast)		SRR033725(GSM497070)
Unmutated CLL (CLLU626). (B cell)		SRR343337SRR107296(GSM677703)
18-30nt fraction of small RNA. (cell line)		SRR343336DRR001482(DRX001036)
"Hela long total cell fraction, control". (hela)		SRR330865(SRX091703)
tissue: skin psoriatic involveddisease state:. (skin)		SRR330880(SRX091718)
tissue: skin psoriatic involveddisease state:. (skin)		SRR060983(GSM569187)
Human pre-germinal center B cell [09-001]. (cell line)		TAX577746(Rovira)
total RNA. (breast)		SRR330903(SRX091741)
tissue: skin psoriatic uninvolveddisease stat. (skin)		SRR094131(GSM651907)
small RNA(18-35nt)small RNA deep sequencing o. (uterus)		DRR000558(DRX000316)
"THP-1 whole cell RNA, after 3 day treatment . (cell line)		SRR330909(SRX091747)
tissue: normal skindisease state: normal. (skin)		TAX577739(Rovira)
total RNA. (breast)		SRR033732(GSM497077)
bjab cell line (bjab103). (B cell)		SRR033715(GSM497060)
Mantle Cell Lymphoma (Mino122). (B cell)		SRR039193(GSM494812)
HL60 cell line is derived from acute promyelo. (cell line)		SRR330894(SRX091732)
tissue: skin psoriatic uninvolveddisease stat. (skin)		SRR330886(SRX091724)
tissue: skin psoriatic uninvolveddisease stat. (skin)		SRR033731(GSM497076)
h929 Cell line (h929). (B cell)		SRR326281(GSM769511)
"Dicer mRNA was knocked down using siDicer, c. (cell line)		SRR330890(SRX091728)
tissue: skin psoriatic uninvolveddisease stat. (skin)		SRR553573(SRX182779)
source: Cerebellum. (Cerebellum)		SRR342897(SRX096793)
small RNA seq of Left atrial tissue. (heart)		SRR444053(SRX128901)
Sample 13cDNABarcode: AF-PP-341: ACG CTC TTC . (skin)		SRR060986(GSM569190)
Human memory B cell [09-001]. (cell line)		SRR330893(SRX091731)
tissue: skin psoriatic uninvolveddisease stat. (skin)		SRR330906(SRX091744)
tissue: normal skindisease state: normal. (skin)		SRR330919(SRX091757)
tissue: normal skindisease state: normal. (skin)
.................................CCTGGACGTGGAGAAGG....................................................................................................................................................................................17216.0016.00-6.50----------0.50-----0.50-------------0.500.50-0.50-1.000.50-0.50-----1.00--------------------1.00--1.00-------0.50----------0.50-0.50---0.50------------------
................................................................................................................................................................TTGGCTCCCTCCCCTACCAGT.................................................21115.007.00----3.00-----1.00---------------1.001.00-1.00-----1.00---1.00-------1.00-------1.00-1.00-1.00------1.00---------1.00-------------------------------------
..........................................................................................................TGGCCTCGGGTGGTGAGCAAAGCAGGGAGAGGGATTCCCAGCGCAGCCTGAGGCTTGGCTCCCTCCCCTAC.....................................................71113.0013.0013.00-----------------------------------------------------------------------------------------------------------------
................................GCCTGGACGTGGAGAAGG....................................................................................................................................................................................18211.5011.50-5.00----0.50---------------------------0.50---------------0.50-----------------------0.50---0.50-----------0.50-0.500.50--0.50-0.500.50-0.50--0.50---------
.................................................................................................................................................................................................................ATCCTGGGGCTGGAGTAGG..197.000.00--2.00-------3.00-------------1.00----------------------------------------------1.00------------------------------------------
................................................................................................................................................................TTGGCTCCCTCCCCTACCAG..................................................2017.007.00-------1.00-1.00------------1.00--1.00---------------1.00---1.00------------------------------------1.00-------------------------------
.....................................GACGTGGAGAAGGGTT.................................................................................................................................................................................166.000.00---------2.00----2.00------------------------------------------------1.00----------------1.00---------------------------------
................................................................................................................................................................................................................CATCCTGGGGCTGGATC.....175.000.00---5.00--------------------------------------------------------------------------------------------------------------
..........................................................................................................................................................................................................GAACCGCATCCTGGGGCTGGAGGT....2414.004.00------4.00-----------------------------------------------------------------------------------------------------------
..............................................................................................................................................................................................................CGCATCCTGGGGCTGGAG......1814.004.00--1.00--------------2.00-------1.00----------------------------------------------------------------------------------------
................................................................................................................................................................TTGGCTCCCTCCCCTACCA...................................................1914.004.00----2.00----------------------1.00------------------------------1.00-------------------------------------------------------
..................................CTGGACGTGGAGAAGG....................................................................................................................................................................................1623.503.50-------------------1.00-------------1.00-----0.500.50---------------------------------0.50---------------------------------------
.....................................GACGTGGAGAAGGGTTTCG..............................................................................................................................................................................193.000.00--1.00-----1.00-------1.00-------------------------------------------------------------------------------------------------
.................................CCTGGACGTGGAGAAGGGTG.................................................................................................................................................................................2013.003.00-------------------------------2.00----------------1.00-----------------------------------------------------------------
...........................................................................................................................................................................................................AACCGCATCCTGGGGCTGGAG......2113.003.00---------------3.00--------------------------------------------------------------------------------------------------
..............................................................................................................................................................................................................CGCATCCTGGGGCTGG........1623.003.00-----0.50---------------------------------------------------------------------------------0.50------0.50--0.50----0.500.50----------
.................................................................................................................................................................................................................ATCCTGGGGCTGGAGTAG...183.000.00--1.00---------------------1.00-------------------------------1.00---------------------------------------------------------
..............................................................................................................................................................................................................CGCATCCTGGGGCTGGAGT.....1913.004.00---------1.00------------------2.00-------------------------------------------------------------------------------------
..GCATTGGTGGCCGGGGGG..................................................................................................................................................................................................................182.000.00---------------------2.00--------------------------------------------------------------------------------------------
......................................................................................................................................................................................................TCCTGAACCGCATCCTGGGGCT..........2212.002.00-------------2.00----------------------------------------------------------------------------------------------------
..............................................................................................................................................................................................................CGCATCCTGGGGCTGGAGTAG...2112.004.00--1.00------------------------------------------------------------------------1.00--------------------------------------
................................................................................................................................CAGGGAGAGGGATTCCCAGCGCAG..............................................................................2412.002.00------------------1.00--------------------------------------------------1.00--------------------------------------------
.....................CCGGAATGGCTGCCTGGACGTGGAGAAG.....................................................................................................................................................................................2812.002.00-----------------------2.00------------------------------------------------------------------------------------------
..............................................................................................................................................................................................................CGCATCCTGGGGCTGGA.......1722.002.00----------------1.00--------------------------------------------------------------1.00----------------------------------
...............................................................................................................................................................................................ACCAAGTTCCTGAACCGCATA..................212.000.00-----------2.00------------------------------------------------------------------------------------------------------
........................GAATGGCTGCCTGGACG.............................................................................................................................................................................................1712.002.00------------2.00-----------------------------------------------------------------------------------------------------
................................................................................................................................................................................................................CATCCTGGGGCTGGAGTCGG..202.000.00------------------------------1.00-------------------------------------1.00---------------------------------------------
..............................................................................................................................................................................................................CGCATCCTGGGGCTG.........1571.291.29-----0.14----------0.290.14----------------------0.14----------------------------------------------0.29--------------------0.29-----
...............................................................................................................................................................................................................GCATCCTGGGGCTGGAGT.....1841.000.25--0.25-----------------------------------------------------------------------------------0.50-0.25-------------------------
..............................................................................................................................................................................................................CGCATCCTGGGGCTGGAGGAGG..221.000.00--------1.00---------------------------------------------------------------------------------------------------------
..............................................................................................................................................................................................................CGCATCCTGGGGCTGGAGAAG...2111.004.00-----1.00------------------------------------------------------------------------------------------------------------
......................................ACGTGGAGAAGGGTGAGAGG............................................................................................................................................................................201.000.00----------------------------------1.00-------------------------------------------------------------------------------
............................................................................................................................................................................................................ACCGCATCCTGGGGCTGGAGGCG...231.000.00--------------1.00---------------------------------------------------------------------------------------------------
.................................................................................................................................AGGGAGAGGGATTCCCAGCG.................................................................................2011.001.00------------------------------------------------------------1.00-----------------------------------------------------
................................................................................................................................................................................................................CATCCTGGGGCTGGAGTAGG..201.000.00------------------------------------1.00-----------------------------------------------------------------------------
................................................................................................................................................................TTGGCTCCCTCCCCTACCAGA.................................................2111.001.00-------------------------------------------------1.00----------------------------------------------------------------
..............................................................................................................................................................................................................CGCATCCTGGGGCTGGAGTCGG..2211.004.00-------------------------------------------------------------1.00----------------------------------------------------
..............................................................................................................................................................................................................CGCATCCTGGGGCTGGAGC.....1911.004.00--------------------------------------------1.00---------------------------------------------------------------------
..............................................................................................................................................................................................................CGCATCCTGGGGCTGGAGTAGG..2211.004.00-----1.00------------------------------------------------------------------------------------------------------------
................................GCCTGGACGTGGAGAGGG....................................................................................................................................................................................181.000.00------------------------------1.00-----------------------------------------------------------------------------------
................................................................................................................................................................TTGGCTCCCTCCCCTACCAGG.................................................2111.007.00---------------------------------------------------1.00--------------------------------------------------------------
......................CGGAATGGCTGCCTGGACGTGGAGAAGG....................................................................................................................................................................................2811.001.00-------------------------------------------------------------------------1.00----------------------------------------
...........................TGGCTGCCTGGACGTGGA.........................................................................................................................................................................................1811.001.00------------------------------------------1.00-----------------------------------------------------------------------
................................................................................................................................................................................................................CATCCTGGGGCTGGAGTCAG..201.000.00-----------------------------------------------------------------------------1.00------------------------------------
..................................................................................................................................................................................................AAGTTCCTGAACCGCATC..................1811.001.00----------------------------------------------------------------1.00-------------------------------------------------
..............................................................................................................................................................................................................CGCATCCTGGGGCTGGAGAAGG..2211.004.00-----1.00------------------------------------------------------------------------------------------------------------
............................GGCTGCCTGGACGTGGAGAAGG....................................................................................................................................................................................2211.001.00--------------------------------------------------------------1.00---------------------------------------------------
..............................................................................................................................AGCAGGGAGAGGGATTCCCAG...................................................................................2111.001.00-----------------------------1.00------------------------------------------------------------------------------------
..............................................................................................................................................................................TACCAGACTGTTCCATC.......................................1711.001.00--------------------1.00---------------------------------------------------------------------------------------------
..................................................................................................................................................................................................AAGTTCCTGAACCGCATCCTG...............2111.001.00-------------1.00----------------------------------------------------------------------------------------------------
..............................................................................................................................................................................................................CGCATCCTGGGGCTGGAGATC...2111.004.00---1.00--------------------------------------------------------------------------------------------------------------
................................................................................................................................CAGGGAGAGGGATTCCCAGCGCAGC.............................................................................2511.001.00----------------------------------------------------1.00-------------------------------------------------------------
..............................................................CACCCAGGCCCAGAGCCG......................................................................................................................................................181.000.00------------------------------------------------------------------------------------1.00-----------------------------
..................................CTGGACGTGGAGAAGGGTG.................................................................................................................................................................................1911.001.00-----------------------------------------------------1.00------------------------------------------------------------
....................CCCGGAATGGCTGCCTGGACGTGGAGAAGG....................................................................................................................................................................................3011.001.00-------------------------------------------1.00----------------------------------------------------------------------
.......................GGAATGGCTGCCTGGACGTGGAGAAGG....................................................................................................................................................................................2711.001.00-------------------1.00----------------------------------------------------------------------------------------------
.....................................GACGTGGAGAAGGGTTCC...............................................................................................................................................................................181.000.00--------------------------------------1.00---------------------------------------------------------------------------
................................GCCTGGACGTGGAGACGG....................................................................................................................................................................................181.000.00-1.00----------------------------------------------------------------------------------------------------------------
...............................TGCCTGGACGTGGAGAAGGA...................................................................................................................................................................................201.000.00------------------------------------------------------1.00-----------------------------------------------------------
................................................................................................................................CAGGGAGAGGGATTCCCAG...................................................................................1911.001.00-------1.00----------------------------------------------------------------------------------------------------------
................................................................................................................................................................................................................CATCCTGGGGCTGGAGTA....181.000.00-------1.00----------------------------------------------------------------------------------------------------------
................................................................................................................................................................TTGGCTCCCTCCCCTACCATT.................................................2111.004.00-----1.00------------------------------------------------------------------------------------------------------------
.................................CCTGGACGTGGAGAAGGGTGAG...............................................................................................................................................................................2211.001.00-----------------------------------------------------------------------------------1.00------------------------------
...........................TGGCTGCCTGGACGTGGAGAAGGACT.................................................................................................................................................................................261.000.00-----------1.00------------------------------------------------------------------------------------------------------
.....................................................................................................................................................................................................................TGGGGCTGGAGGTGCAC1711.001.00------------------------------------------------------------------------1.00-----------------------------------------
................................................................................................................................................................TTGGCTCCCTCCCCTACCAAAA................................................2211.004.00--------------------------1.00---------------------------------------------------------------------------------------
................................................................................................................................................................TTGGCTCCCTCCCCTACCAGTT................................................2211.007.00---------------------------------------------------------------------------------1.00--------------------------------
..............................................................................................................................................................................................................CGCATCCTGGGGCTGGAGCAGG..2211.004.00-------1.00----------------------------------------------------------------------------------------------------------
..................................................................................................................................................................................................AAGTTCCTGAACCGC.....................1511.001.00----------------------1.00-------------------------------------------------------------------------------------------
.........................AATGGCTGCCTGGACGTGGAGAAG.....................................................................................................................................................................................2411.001.00-----------1.00------------------------------------------------------------------------------------------------------
..............................................................................................................................................................................................................CGCATCCTGGGGCTGGAGGAGGT.231.000.00--------1.00---------------------------------------------------------------------------------------------------------
...............................................................................................................................................................................................................GCATCCTGGGGCTGGAGCA....1940.750.25-------------------------------------------------------------------------------------0.75----------------------------
..............................................................................................................................................................................................................CGCATCCTGGGGCTGGATTCG...2120.502.00--0.50---------------------------------------------------------------------------------------------------------------
..................................CTGGACGTGGAGAAGGACT.................................................................................................................................................................................1920.503.50------------------0.50-----------------------------------------------------------------------------------------------
..................................CTGGACGTGGAGAAGGAGT.................................................................................................................................................................................1920.503.50------------0.50-----------------------------------------------------------------------------------------------------
.................................CCTGGACGTGGAGAAGGACT.................................................................................................................................................................................2020.5016.00----------------------------------------------------------------------------------------------------0.50-------------
.................................CCTGGACGTGGAGAAGGAA..................................................................................................................................................................................1920.5016.00--------------------------------------------------0.50---------------------------------------------------------------
.......................................................................................................................TGAGCAAAGCAGGGAGAG.............................................................................................1820.500.50------------------------------------0.50-----------------------------------------------------------------------------
.......................................................................................................................................................................CCTCCCCTACCAGACTGT.............................................1820.500.50-------------------------------------0.50----------------------------------------------------------------------------
...............................................................................................................................................................................................................GCATCCTGGGGCTGGAGTAG...2040.500.25--------0.50---------------------------------------------------------------------------------------------------------
...............................................................................................................................................................................................................GCATCCTGGGGCTGGAGTAGG..2140.500.25-------0.25------------------------------------------------------------------------------0.25---------------------------
...............................................................................................................................................................................................................GCATCCTGGGGCTGGA.......1690.440.44--------------------------------------------------------------------------------------0.11-0.22-----------------------0.11-
..............................................................................................................................................................................................................CGCATCCTGGGGCTGTAGT.....1970.431.29-----------------------------------------0.14--------------------------------------------------------------------0.140.14--
....................................GGACGTGGAGAAGGGT..................................................................................................................................................................................1630.330.33----------------------------------------------------------------------------------------------------------0.33-------
..............................CTGCCTGGACGTGGA.........................................................................................................................................................................................1530.330.33---------------------------------------------------------------------------------------------------------0.33--------
..........................................GGAGAAGGGTGAGTGC............................................................................................................................................................................1630.330.33-----------------------------------------------------------------------------------------------------------0.33------
...............................................................................................................................................................................................................GCATCCTGGGGCTGGAGCAGG..2140.250.25--------0.25---------------------------------------------------------------------------------------------------------
...............................................................................................................................................................................................................GCATCCTGGGGCTGGAG......1740.250.25----------------------------------------------------------------------------------------0.25-------------------------
...............................................................................................................................................................................................................GCATCCTGGGGCTGGAGTA....1940.250.25--0.25---------------------------------------------------------------------------------------------------------------
...............................................................................................................................................................................................................GCATCCTGGGGCTGGAGAAGG..2140.250.25--------0.25---------------------------------------------------------------------------------------------------------
...................................TGGACGTGGAGAAGG....................................................................................................................................................................................1590.220.22--------------------------------0.11--------------------------------------------------------------------------------0.11
...................................TGGACGTGGAGAAGGAC..................................................................................................................................................................................1790.220.22------------------------------------------0.11--------------------------------------------------------------0.11--------
...............................................................................................................................................................................................................GCATCCTGGGGCTGGACCA....1990.110.44-------------------------------------------------------------------------------------0.11----------------------------

Antisense strand
GGGCATTGGTGGCCGGGAGTCCCGGAATGGCTGCCTGGACGTGGAGAAGGGTGAGTGCCCCACACCCAGGCCCAGAGGCGCTCCTGTCTCTCATCTCATGCAACCTTGGCCTCGGGTGGTGAGCAAAGCAGGGAGAGGGATTCCCAGCGCAGCCTGAGGCTTGGCTCCCTCCCCTACCAGACTGTTCCATCACCAAGTTCCTGAACCGCATCCTGGGGCTGGAGGTGCAC
.................................................................................................................................((((.((((((...(((....((((...))))))).)))))))))).......................................................
...........................................................................................................................124.....................................................180................................................
SizePerfect hitTotal NormPerfect NormDRR001486(DRX001040)
"Hela long cytoplasmic cell fraction, LNA(+)". (hela)		SRR207110(GSM721072)
Nuclear RNA. (cell line)		SRR189785SRR314796(SRX084354)
"Total RNA, fractionated (15-30nt)". (cell line)		SRR037944(GSM510482)
293DcrTN_cand5. (cell line)		SRR330885(SRX091723)
tissue: skin psoriatic uninvolveddisease stat. (skin)		SRR207115(GSM721077)
XRN1&2 knockdown. (XRN1/XRN2 cell line)		SRR189782SRR189784SRR444050(SRX128898)
Sample 10cDNABarcode: AF-PP-335: ACG CTC TTC . (skin)		SRR330899(SRX091737)
tissue: skin psoriatic uninvolveddisease stat. (skin)		SRR039623(GSM531986)
HCV(+) HCC Tissue Sample. (liver)		SRR330874(SRX091712)
tissue: skin psoriatic involveddisease state:. (skin)		SRR039621(GSM531984)
HBV(+) HCC Tissue Sample 2. (liver)		SRR189779(GSM714639)
cell line: HEK293clip variant: PAR-CLIPenzyma. (cell line)		SRR387909(GSM843861)
specific-host: Homo sapienshost cell line: Su. (cell line)		SRR107297(GSM677704)
18-30nt fraction of small RNA. (cell line)		SRR330907(SRX091745)
tissue: normal skindisease state: normal. (skin)		SRR330872(SRX091710)
tissue: skin psoriatic involveddisease state:. (skin)		SRR330873(SRX091711)
tissue: skin psoriatic involveddisease state:. (skin)		SRR330863(SRX091701)
tissue: skin psoriatic involveddisease state:. (skin)		SRR330898(SRX091736)
tissue: skin psoriatic uninvolveddisease stat. (skin)		SRR342901(SRX096797)
small RNA seq of Left atrial tissue. (heart)		SRR330904(SRX091742)
tissue: normal skindisease state: normal. (skin)		SRR015364(GSM380329)
Plasma B cells (PC44). (B cell)		SRR330884(SRX091722)
tissue: skin psoriatic uninvolveddisease stat. (skin)		SRR330901(SRX091739)
tissue: skin psoriatic uninvolveddisease stat. (skin)		SRR191548(GSM715658)
101genomic small RNA (size selected RNA from . (breast)		SRR343335SRR330870(SRX091708)
tissue: skin psoriatic involveddisease state:. (skin)		SRR015360(GSM380325)
Plasma B cells (PC137). (B cell)		SRR033723(GSM497068)
L1236 cell line (L1236). (B cell)		SRR553572(SRX182778)
source: Frontal Cortex. (Frontal Cortex)		SRR330867(SRX091705)
tissue: skin psoriatic involveddisease state:. (skin)		SRR039616(GSM531979)
HBV(+) Distal Tissue Sample 1. (liver)		SRR330864(SRX091702)
tissue: skin psoriatic involveddisease state:. (skin)		SRR330861(SRX091699)
tissue: skin psoriatic involveddisease state:. (skin)		SRR330877(SRX091715)
tissue: skin psoriatic involveddisease state:. (skin)		SRR330869(SRX091707)
tissue: skin psoriatic involveddisease state:. (skin)		SRR330878(SRX091716)
tissue: skin psoriatic involveddisease state:. (skin)		SRR330862(SRX091700)
tissue: skin psoriatic involveddisease state:. (skin)		SRR330902(SRX091740)
tissue: skin psoriatic uninvolveddisease stat. (skin)		SRR326279(GSM769509)
cytoplasmic fraction was isolated using PARIS. (cell line)		RoviraIPAgo2(Rovira)
total RNA. (ago2 breast)		SRR343334SRR191420(GSM715530)
122genomic small RNA (size selected RNA from . (breast)		SRR330912(SRX091750)
tissue: normal skindisease state: normal. (skin)		SRR037936(GSM510474)
293cand1. (cell line)		SRR039191(GSM494810)
PBMCs were isolated by ficoll gradient from t. (blood)		SRR330857(SRX091695)
tissue: skin psoriatic involveddisease state:. (skin)		SRR033722(GSM497067)
KMS12 cell line (KMS12). (B cell)		SRR040010(GSM532895)
G529N. (cervix)		DRR000562(DRX000320)
Isolation of RNA following immunoprecipitatio. (ago3 cell line)		SRR039625(GSM531988)
HBV(-) HCV(-) HCC Tissue Sample. (liver)		SRR039620(GSM531983)
HBV(+) Adjacent Tissue Sample 2. (liver)		SRR191603(GSM715713)
71genomic small RNA (size selected RNA from t. (breast)		SRR094130(GSM651906)
small RNA(18-35nt)small RNA deep sequencing o. (uterus)		SRR207113(GSM721075)
IP against AGO 1 & 2. (ago1/2 cell line)		SRR191607(GSM715717)
192genomic small RNA (size selected RNA from . (breast)		SRR037937(GSM510475)
293cand2. (cell line)		SRR191621(GSM715731)
16genomic small RNA (size selected RNA from t. (breast)		SRR015358(GSM380323)
NaÌøve B Cell (Naive39). (B cell)		SRR039617(GSM531980)
HBV(+) Adjacent Tissue Sample 1. (liver)		SRR363675(GSM830252)
cell type: human foreskin fibroblasts (HFF)tr. (fibroblast)		SRR040025(GSM532910)
G613T. (cervix)		SRR189780(GSM714640)
cell line: HEK293clip variant: PAR-CLIPenzyma. (cell line)		SRR191597(GSM715707)
75genomic small RNA (size selected RNA from t. (breast)		SRR330871(SRX091709)
tissue: skin psoriatic involveddisease state:. (skin)		TAX577742(Rovira)
total RNA. (breast)		SRR029126(GSM416755)
143B. (cell line)		SRR330868(SRX091706)
tissue: skin psoriatic involveddisease state:. (skin)		TAX577579(Rovira)
total RNA. (breast)		GSM450600(GSM450600)
miRNA sequencing raw reads from post-mortem s. (brain)		SRR039622(GSM531985)
HCV(+) Adjacent Tissue Sample. (liver)		SRR326282(GSM769512)
"Dicer mRNA was knocked down using siDicer, t. (cell line)		TAX577738(Rovira)
total RNA. (breast)		SRR363673(GSM830250)
cell type: human foreskin fibroblasts (HFF)tr. (fibroblast)		SRR207116(GSM721078)
Nuclear RNA. (cell line)		SRR326280(GSM769510)
total cell content of unperturbed cells was s. (cell line)		SRR015361(GSM380326)
Memory B cells (MM55). (B cell)		SRR189778(GSM714638)
cell line: HEK293clip variant: PAR-CLIPenzyma. (cell line)		SRR330916(SRX091754)
tissue: normal skindisease state: normal. (skin)		SRR033729(GSM497074)
splenic MZL (Splenic414). (B cell)		SRR060981(GSM569185)
Human centroblast [09-001]. (cell line)		TAX577743(Rovira)
total RNA. (breast)		SRR033725(GSM497070)
Unmutated CLL (CLLU626). (B cell)		SRR343337SRR107296(GSM677703)
18-30nt fraction of small RNA. (cell line)		SRR343336DRR001482(DRX001036)
"Hela long total cell fraction, control". (hela)		SRR330865(SRX091703)
tissue: skin psoriatic involveddisease state:. (skin)		SRR330880(SRX091718)
tissue: skin psoriatic involveddisease state:. (skin)		SRR060983(GSM569187)
Human pre-germinal center B cell [09-001]. (cell line)		TAX577746(Rovira)
total RNA. (breast)		SRR330903(SRX091741)
tissue: skin psoriatic uninvolveddisease stat. (skin)		SRR094131(GSM651907)
small RNA(18-35nt)small RNA deep sequencing o. (uterus)		DRR000558(DRX000316)
"THP-1 whole cell RNA, after 3 day treatment . (cell line)		SRR330909(SRX091747)
tissue: normal skindisease state: normal. (skin)		TAX577739(Rovira)
total RNA. (breast)		SRR033732(GSM497077)
bjab cell line (bjab103). (B cell)		SRR033715(GSM497060)
Mantle Cell Lymphoma (Mino122). (B cell)		SRR039193(GSM494812)
HL60 cell line is derived from acute promyelo. (cell line)		SRR330894(SRX091732)
tissue: skin psoriatic uninvolveddisease stat. (skin)		SRR330886(SRX091724)
tissue: skin psoriatic uninvolveddisease stat. (skin)		SRR033731(GSM497076)
h929 Cell line (h929). (B cell)		SRR326281(GSM769511)
"Dicer mRNA was knocked down using siDicer, c. (cell line)		SRR330890(SRX091728)
tissue: skin psoriatic uninvolveddisease stat. (skin)		SRR553573(SRX182779)
source: Cerebellum. (Cerebellum)		SRR342897(SRX096793)
small RNA seq of Left atrial tissue. (heart)		SRR444053(SRX128901)
Sample 13cDNABarcode: AF-PP-341: ACG CTC TTC . (skin)		SRR060986(GSM569190)
Human memory B cell [09-001]. (cell line)		SRR330893(SRX091731)
tissue: skin psoriatic uninvolveddisease stat. (skin)		SRR330906(SRX091744)
tissue: normal skindisease state: normal. (skin)		SRR330919(SRX091757)
tissue: normal skindisease state: normal. (skin)
........................................................................................................................................................................................CAGGATGCGGTTCAGGAACTTGGTGATGGAA............... 3111.001.00--------------------1.00---------------------------------------------------------------------------------------------
...............................................................ACCCAGGCCCAGAGGTCCC.................................................................................................................................................... 191.000.00-----------------------------------------------------------------1.00------------------------------------------------
.............................................................................................................................................................................TTGGTGATGGAACAGTCTGGTAG.................................. 2311.001.00--------------------------------1.00---------------------------------------------------------------------------------
......GACTCCCGGCCACCA................................................................................................................................................................................................................. 1560.170.17-------------------------------------------------------------------------------------------------------------0.17----
.....................................................................................................................................................................................TTGGTGATGGAACAG.................................. 1560.170.17------------0.17-----------------------------------------------------------------------------------------------------