ID: uc002kyq.3_intron_0_0_chr18_32870356_f.5p
GENE: (1)
chr18:32870306-32870555+


(1)
AGO2.ip 		(15)
B-CELL 		(14)
BREAST 		(36)
CELL-LINE 		(9)
CERVIX 		(3)
HEART 		(2)
HELA 		(1)
LIVER 		(3)
OTHER 		(13)
SKIN 		(1)
XRN.ip

Sense strand
GCAGGTTCGCCGGGTGTGAGGCTTCACAGCGGTCCGGTGACCAAGTCGAGGTAAGGGTGATGTCGGCTCGCGGATAGCAGAGGAGTTCCGGGTGATCTTGCCTAACGAGCAGGAAACTGTGCATGGTTTCTCGAGTCCTTGGAGAGTGAAGGCCCCCGGGGTCGCTCCCGGGCACGGAGAGACGATTGGTTCACGGCCTAGTGTTCGGTTTGTTCCCAGTCAGCCCTTGCTGGCCTTGGGTTCAACCGAA
................................................................(((....((((.((...((....))..)).)))).)))......((((....))))..................................................................................................................................
................................................................65..........................................................125...........................................................................................................................
SizePerfect hitTotal NormPerfect NormSRR207116(GSM721078)
Nuclear RNA. (cell line)		SRR207115(GSM721077)
XRN1&2 knockdown. (XRN1/XRN2 cell line)		SRR037944(GSM510482)
293DcrTN_cand5. (cell line)		SRR207110(GSM721072)
Nuclear RNA. (cell line)		SRR033729(GSM497074)
splenic MZL (Splenic414). (B cell)		SRR033712(GSM497057)
Burkitt Lymphoma (BL510). (B cell)		SRR037934(GSM510472)
293cand4_rep3. (cell line)		SRR037943(GSM510481)
293DcrTN. (cell line)		SRR033728(GSM497073)
MALT (MALT413). (B cell)		DRR001488(DRX001042)
"Hela short nuclear cell fraction, LNA(+)". (hela)		SRR033718(GSM497063)
Multiple Myeloma (U266). (B cell)		DRR000555(DRX000313)
"THP-1 whole cell RNA, no treatment". (cell line)		SRR189783DRR000556(DRX000314)
"THP-1 whole cell RNA, after 3 day treatment . (cell line)		TAX577739(Rovira)
total RNA. (breast)		DRR001489(DRX001043)
"Hela short nuclear cell fraction, control". (hela)		SRR029132(GSM416761)
MB-MDA231. (cell line)		SRR033730(GSM497075)
Lymphoblastic (ALL411). (B cell)		SRR037935(GSM510473)
293cand3. (cell line)		SRR033722(GSM497067)
KMS12 cell line (KMS12). (B cell)		DRR000557(DRX000315)
"THP-1 whole cell RNA, after 3 day treatment . (cell line)		SRR342901(SRX096797)
small RNA seq of Left atrial tissue. (heart)		DRR000558(DRX000316)
"THP-1 whole cell RNA, after 3 day treatment . (cell line)		SRR033721(GSM497066)
Ly3 cell line (Ly3). (B cell)		SRR033726(GSM497071)
Mututated CLL (CLLM633). (B cell)		SRR033727(GSM497072)
HIV-positive DL (HIV412). (B cell)		SRR033715(GSM497060)
Mantle Cell Lymphoma (Mino122). (B cell)		TAX577742(Rovira)
total RNA. (breast)		SRR039635(GSM518472)
THP1_nuc_sRNAs. (cell line)		SRR330874(SRX091712)
tissue: skin psoriatic involveddisease state:. (skin)		SRR029130(GSM416759)
DLD2. (cell line)		SRR038860(GSM458543)
MM426. (cell line)		TAX577744(Rovira)
total RNA. (breast)		SRR342898(SRX096794)
small RNA seq of Right atrial tissue. (heart)		SRR039637(GSM518474)
THP1_total_sRNAs. (cell line)		SRR037933(GSM510471)
293cand4_rep2. (cell line)		SRR330864(SRX091702)
tissue: skin psoriatic involveddisease state:. (skin)		RoviraIPAgo2(Rovira)
total RNA. (ago2 breast)		SRR191409(GSM715519)
19genomic small RNA (size selected RNA from t. (breast)		SRR029054(GSM402329)
MCF7_smallRNAseq. (cell line)		SRR330912(SRX091750)
tissue: normal skindisease state: normal. (skin)		GSM532877(GSM532877)
G691N. (cervix)		SRR040030(GSM532915)
G013N. (cervix)		SRR015359(GSM380324)
Germinal Center B cell (GC136). (B cell)		SRR107297(GSM677704)
18-30nt fraction of small RNA. (cell line)		SRR039625(GSM531988)
HBV(-) HCV(-) HCC Tissue Sample. (liver)		SRR191586(GSM715696)
197genomic small RNA (size selected RNA from . (breast)		SRR039190(GSM494809)
PBMCs were isolated by ficoll gradient from t. (blood)		SRR343332(GSM796035)
"KSHV (HHV8), EBV (HHV-4)". (cell line)		SRR040028(GSM532913)
G026N. (cervix)		SRR040011(GSM532896)
G529T. (cervix)		SRR444059(SRX128907)
Sample 17cDNABarcode: AF-PP-339: ACG CTC TTC . (skin)		SRR330863(SRX091701)
tissue: skin psoriatic involveddisease state:. (skin)		SRR033717(GSM497062)
Mentle Cell Lymphoma (MCL112). (B cell)		SRR040016(GSM532901)
G645N. (cervix)		GSM339995(GSM339995)
hues6NP. (cell line)		SRR033710(GSM497055)
GCB DLBCL (GCB385). (B cell)		SRR330891(SRX091729)
tissue: skin psoriatic uninvolveddisease stat. (skin)		SRR191611(GSM715721)
57genomic small RNA (size selected RNA from t. (breast)		SRR343333(GSM796036)
KSHV (HHV8). (cell line)		GSM416733(GSM416733)
HEK293. (cell line)		SRR189782SRR037937(GSM510475)
293cand2. (cell line)		SRR033716(GSM497061)
Mentle Cell Lymphoma (MCL114). (B cell)		SRR189785SRR039192(GSM494811)
K562 cell line is derived from a CML patient . (cell line)		SRR040031(GSM532916)
G013T. (cervix)		SRR037931(GSM510469)
293GFP. (cell line)		SRR060982(GSM569186)
Human centrocyte [09-001]. (cell line)		TAX577741(Rovira)
total RNA. (breast)		SRR189779(GSM714639)
cell line: HEK293clip variant: PAR-CLIPenzyma. (cell line)		SRR040025(GSM532910)
G613T. (cervix)		SRR029127(GSM416756)
A549. (cell line)		SRR037932(GSM510470)
293cand4_rep1. (cell line)		SRR033732(GSM497077)
bjab cell line (bjab103). (B cell)		SRR330871(SRX091709)
tissue: skin psoriatic involveddisease state:. (skin)		SRR330919(SRX091757)
tissue: normal skindisease state: normal. (skin)		SRR039193(GSM494812)
HL60 cell line is derived from acute promyelo. (cell line)		SRR191548(GSM715658)
101genomic small RNA (size selected RNA from . (breast)		SRR037941(GSM510479)
293DroshaTN. (cell line)		SRR191411(GSM715521)
21genomic small RNA (size selected RNA from t. (breast)		SRR191624(GSM715734)
31genomic small RNA (size selected RNA from t. (breast)		TAX577579(Rovira)
total RNA. (breast)		SRR330877(SRX091715)
tissue: skin psoriatic involveddisease state:. (skin)		SRR330858(SRX091696)
tissue: skin psoriatic involveddisease state:. (skin)		SRR330894(SRX091732)
tissue: skin psoriatic uninvolveddisease stat. (skin)		TAX577589(Rovira)
total RNA. (breast)		SRR326282(GSM769512)
"Dicer mRNA was knocked down using siDicer, t. (cell line)		SRR342897(SRX096793)
small RNA seq of Left atrial tissue. (heart)		SRR040024(GSM532909)
G613N. (cervix)		SRR326280(GSM769510)
total cell content of unperturbed cells was s. (cell line)		SRR330916(SRX091754)
tissue: normal skindisease state: normal. (skin)		SRR330895(SRX091733)
tissue: skin psoriatic uninvolveddisease stat. (skin)		SRR060981(GSM569185)
Human centroblast [09-001]. (cell line)		SRR191394(GSM715504)
23genomic small RNA (size selected RNA from t. (breast)		SRR040015(GSM532900)
G623T. (cervix)		SRR553573(SRX182779)
source: Cerebellum. (Cerebellum)		SRR038861(GSM458544)
MM466. (cell line)		SRR553572(SRX182778)
source: Frontal Cortex. (Frontal Cortex)
.....................................................................GCGGATAGCAGAGGAGTT...................................................................................................................................................................18111.0011.00---8.00----1.00--------------1.00--1.00------------------------------------------------------------------------
.......................................ACCAAGTCGAGGTAAGGG.................................................................................................................................................................................................18110.0010.00--2.00----2.001.00-------------------1.00-1.00----------------------1.00-----------------------------1.00--1.00------------
..........................................AAGTCGAGGTAAGGGTGA..............................................................................................................................................................................................1816.006.00-1.00--3.00---------------------------------------------1.00-------------------------------------------1.00----
.....................................................................GCGGATAGCAGAGGAGTTCCGGGTGA...........................................................................................................................................................2615.005.00-5.00-------------------------------------------------------------------------------------------------
............................................GTCGAGGTAAGGGTGATGT...........................................................................................................................................................................................1914.004.002.00-----------------------------------------------------------------1.00----------------------1.00---------
.........................................CAAGTCGAGGTAAGGGTGA..............................................................................................................................................................................................1914.004.002.00---2.00----------------------------------------------------------------------------------------------
..................AGGCTTCACAGCGGTCCGG.....................................................................................................................................................................................................................1914.004.00-----------1.00-------------------1.00------------------------------1.00-------------------1.00----------------
............................................................................................................................................................CGGGGTCGCTCCCGGGCACGGAGAGACGAT................................................................3014.004.00------2.00----------------------------1.00-------------------------------------1.00-------------------------
.................................................................................GGAGTTCCGGGTGATCTTGC.....................................................................................................................................................2014.004.00------3.00----------------------------1.00---------------------------------------------------------------
...................................................TAAGGGTGATGTCGGCAGT....................................................................................................................................................................................194.000.00------------3.00------------------------------------------------1.00-------------------------------------
.....................................................................GCGGATAGCAGAGGAGTTCC.................................................................................................................................................................2014.004.00--------------------------1.00-------------1.00---------------1.00-----------------1.00------------------------
........................................CCAAGTCGAGGTAAGGGTGA..............................................................................................................................................................................................2013.003.003.00--------------------------------------------------------------------------------------------------
...........................AGCGGTCCGGTGACCAAG.............................................................................................................................................................................................................1813.003.00-----3.00---------------------------------------------------------------------------------------------
.....................................................................GCGGATAGCAGAGGAGTTCCG................................................................................................................................................................2113.003.00-2.00------------------------------1.00------------------------------------------------------------------
...............................GTCCGGTGACCAAGTCGAGG.......................................................................................................................................................................................................2013.003.00-3.00-------------------------------------------------------------------------------------------------
...................................................................................................GCCTAACGAGCAGGAAACTGTG.................................................................................................................................2213.003.00--------------1.00------1.00-----------------------------------------------------------1.00-----------------
............................................GTCGAGGTAAGGGTGATG............................................................................................................................................................................................1813.003.003.00--------------------------------------------------------------------------------------------------
..................................................................CTCGCGGATAGCAGAGGAGT....................................................................................................................................................................2013.003.00----------1.00------------1.00-----------------------------------------------1.00---------------------------
.........................................CAAGTCGAGGTAAGGGTGAT.............................................................................................................................................................................................2013.003.00-------------1.00--1.00-------------------------------------1.00--------------------------------------------
...............................................................................GAGGAGTTCCGGGTGATCTTG......................................................................................................................................................2112.002.00----------------2.00----------------------------------------------------------------------------------
.....................................................AGGGTGATGTCGGCTCGC...................................................................................................................................................................................1812.002.00-----------------------------------------------------------------------------1.00---------1.00-----------
.....................................................................GCGGATAGCAGAGGAGTTC..................................................................................................................................................................1912.002.002.00--------------------------------------------------------------------------------------------------
....................................................AAGGGTGATGTCGGCTCG....................................................................................................................................................................................1812.002.00--------1.00------------------------------------------------------------------------------------1.00-----
.......................................ACCAAGTCGAGGTAAGGGTGA..............................................................................................................................................................................................2112.002.00--------------1.00--------------------------------1.00---------------------------------------------------
....................................................................CGCGGATAGCAGAGGAGTT...................................................................................................................................................................1912.002.00------------------------1.00-------------------1.00------------------------------------------------------
...............................................................................................TCTTGCCTAACGAGCAGGA........................................................................................................................................1912.002.00--2.00------------------------------------------------------------------------------------------------
............................................GTCGAGGTAAGGGTGATGTC..........................................................................................................................................................................................2012.002.002.00--------------------------------------------------------------------------------------------------
........................................CCAAGTCGAGGTAAGGGTGATGTCGG........................................................................................................................................................................................2612.002.00---------2.00-----------------------------------------------------------------------------------------
.........................................................................ATAGCAGAGGAGTTCCGGGTGATCTT.......................................................................................................................................................2612.002.00------------------------------------------------------------1.00------1.00-------------------------------
................................................AGGTAAGGGTGATGTCGGCT......................................................................................................................................................................................2012.002.00---------------------------------------1.00----------------------------1.00------------------------------
.....................................................................................................CTAACGAGCAGGAAACTG...................................................................................................................................1812.002.00--2.00------------------------------------------------------------------------------------------------
..............................................CGAGGTAAGGGTGATGTCGG........................................................................................................................................................................................2012.002.001.00-------------1.00------------------------------------------------------------------------------------
......................................................................................................................................................................CCCGGGCACGGAGAGACGATTG..............................................................2212.002.00-------2.00-------------------------------------------------------------------------------------------
........................................CCAAGTCGAGGTAAGGGTGATGTC..........................................................................................................................................................................................2412.002.00-----2.00---------------------------------------------------------------------------------------------
......................................................GGGTGATGTCGGCTCGCTG.................................................................................................................................................................................191.000.00----------------------------------------------------1.00----------------------------------------------
...................................................................................................................................................................................................................................TGCTGGCCTTGGGTTCGT.....181.000.00------------------------------------------------1.00--------------------------------------------------
....................................................................................................CCTAACGAGCAGGAAACTGTGCA...............................................................................................................................2311.001.00----------------------------------------------1.00----------------------------------------------------
............................................................TGTCGGCTCGCGGATAGCA...........................................................................................................................................................................1911.001.00---------------1.00-----------------------------------------------------------------------------------
......................................................................................TCCGGGTGATCTTGCCTA..................................................................................................................................................1811.001.00--1.00------------------------------------------------------------------------------------------------
..................................................................................................TGCCTAACGAGCAGGAAACTGTG.................................................................................................................................2311.001.00------------------------------1.00--------------------------------------------------------------------
..AGGTTCGCCGGGTGTGAGGCACAG................................................................................................................................................................................................................................2421.000.50----------------------------------------------------------------------1.00----------------------------
....................................................AAGGGTGATGTCGGCAGT....................................................................................................................................................................................181.000.00----------------------------------------------------------------1.00----------------------------------
.......................................ACCAAGTCGAGGTAAGGGTGATGTCGGC.......................................................................................................................................................................................2811.001.00-----------1.00---------------------------------------------------------------------------------------
...........................AGCGGTCCGGTGACCAAGTCGAGGTAAGGGTG...............................................................................................................................................................................................3211.001.00---------------1.00-----------------------------------------------------------------------------------
......................................................................CGGATAGCAGAGGAGTTC..................................................................................................................................................................1811.001.00---------------------------1.00-----------------------------------------------------------------------
.....................................TGACCAAGTCGAGGTAAGGG.................................................................................................................................................................................................2011.001.00-----------1.00---------------------------------------------------------------------------------------
...............................GTCCGGTGACCAAGTCGA.........................................................................................................................................................................................................1811.001.00-------------1.00-------------------------------------------------------------------------------------
..........................................................GATGTCGGCTCGCGGATAAC............................................................................................................................................................................201.000.00---------------------------------------------------------------------1.00-----------------------------
........................................CCAAGTCGAGGTAAG...................................................................................................................................................................................................1511.001.00---------------------1.00-----------------------------------------------------------------------------
...............................................................CGGCTCGCGGATAGCAG..........................................................................................................................................................................1711.001.00---------------1.00-----------------------------------------------------------------------------------
.....................................................................GCGGATAGCAGAGGAGTTCTG................................................................................................................................................................2111.002.00-------------------------------1.00-------------------------------------------------------------------
.........................................CAAGTCGAGGTAAGGGTGATG............................................................................................................................................................................................2111.001.00-------------------1.00-------------------------------------------------------------------------------
.........................ACAGCGGTCCGGTGACCAAGTCGAG........................................................................................................................................................................................................2511.001.00-------------------------------------------------------------------------------1.00-------------------
.....................................TGACCAAGTCGAGGTAAGGGTGATG............................................................................................................................................................................................2511.001.00---------------------------------1.00-----------------------------------------------------------------
...................................................................................................GCCTAACGAGCAGGAAA......................................................................................................................................1711.001.00----------------------------------------------------------1.00----------------------------------------
.........................................................................................................................................................................................................TGTTCGGTTTGTTCCCAGTC.............................2011.001.00-----------------------------1.00---------------------------------------------------------------------
.......................................ACCAAGTCGAGGTAAGGGTGAT.............................................................................................................................................................................................2211.001.00----------------------------------1.00----------------------------------------------------------------
..............................................CGAGGTAAGGGTGATGTC..........................................................................................................................................................................................1811.001.00---------------------------------------------------1.00-----------------------------------------------
..................................................................CTCGCGGATAGCAGAGGA......................................................................................................................................................................1811.001.00---------1.00-----------------------------------------------------------------------------------------
.CAGGTTCGCCGGGTGTGAGGC....................................................................................................................................................................................................................................2121.001.00------------------------------------1.00--------------------------------------------------------------
................................................................................................CTTGCCTAACGAGCAGGAAACTGTGC................................................................................................................................2611.001.00--1.00------------------------------------------------------------------------------------------------
.........................................CAAGTCGAGGTAAGGGTGATGTCGG........................................................................................................................................................................................2511.001.00---------------------------------------------------------------------------1.00-----------------------
..........................................................................................................................ATGGTTTCTCGAGTCCTT..............................................................................................................1811.001.00--------------------------------------1.00------------------------------------------------------------
........GCCGGGTGTGAGGCTTCACAGC............................................................................................................................................................................................................................2221.001.00-------------------------------------------------------------------------------------------1.00-------
.................................................................................GGAGTTCCGGGTGATCTTGCC....................................................................................................................................................2111.001.00------------------------------------------------------------------------1.00--------------------------
....................................................AAGGGTGATGTCGGCTCGCGGAT...............................................................................................................................................................................2311.001.00-----------------------------------------------------------1.00---------------------------------------
.........................................................................................................................................................CCCCGGGGTCGCTCCGC................................................................................171.000.00-----------------------------------------1.00---------------------------------------------------------
..........................................AAGTCGAGGTAAGGGTGATGTCGG........................................................................................................................................................................................2411.001.00--------------------------------1.00------------------------------------------------------------------
.............................................................GTCGGCTCGCGGATAGCAGAG........................................................................................................................................................................2111.001.00----------------------1.00----------------------------------------------------------------------------
.........................................CAAGTCGAGGTAAGGGTG...............................................................................................................................................................................................1811.001.00-----------------1.00---------------------------------------------------------------------------------
.....................................................AGGGTGATGTCGGCTCGG...................................................................................................................................................................................181.000.00------------------------1.00--------------------------------------------------------------------------
.....................................................................GCGGATAGCAGAGGAGTTCCGG...............................................................................................................................................................2211.001.00--------------------------------------------------------------------------------------------1.00------
.......................................ACCAAGTCGAGGTAAGGGTG...............................................................................................................................................................................................2011.001.00-------------------------1.00-------------------------------------------------------------------------
....................GCTTCACAGCGGTCCGGT....................................................................................................................................................................................................................1811.001.00-------------1.00-------------------------------------------------------------------------------------
...................................................................TCGCGGATAGCAGAGGAGTT...................................................................................................................................................................2011.001.00-----------------------------------------------------------------------------------------------1.00---
...........................AGCGGTCCGGTGACCAAGTCGAGATGG....................................................................................................................................................................................................271.000.00-------------------------1.00-------------------------------------------------------------------------
............................................GTCGAGGTAAGGGTGATGTCGGCTCG....................................................................................................................................................................................2611.001.00--------------------1.00------------------------------------------------------------------------------
.................................................................................................TTGCCTAACGAGCAGGAAAC.....................................................................................................................................2011.001.00---------------------------------1.00-----------------------------------------------------------------
.............................................................GTCGGCTCGCGGATAGCAGAAGG......................................................................................................................................................................231.000.00-------------------------------------------1.00-------------------------------------------------------
..AGGTTCGCCGGGTGTGATAC....................................................................................................................................................................................................................................201.000.001.00--------------------------------------------------------------------------------------------------
.....................................................AGGGTGATGTCGGCTCGCG..................................................................................................................................................................................1911.001.00-------------------------------------------------------1.00-------------------------------------------
......................................................................CGGATAGCAGAGGAGTTCC.................................................................................................................................................................1911.001.00----------1.00----------------------------------------------------------------------------------------
........................................................................................................................................................................CGGGCACGGAGAGACGATTGGTTCAC........................................................2611.001.00--1.00------------------------------------------------------------------------------------------------
....................GCTTCACAGCGGTCCGGTGACCAAG.............................................................................................................................................................................................................2511.001.00-------------------------------------------------------------------------------------1.00-------------
....................................................................CGCGGATAGCAGAGGAGTTCC.................................................................................................................................................................2111.001.00------------------------------------------1.00--------------------------------------------------------
...................................................................TCGCGGATAGCAGAGGAG.....................................................................................................................................................................1811.001.00----------------------------1.00----------------------------------------------------------------------
..............................GGTCCGGTGACCAAGTCGAG........................................................................................................................................................................................................2011.001.00------------------------------------------------------------------------------1.00--------------------
..........................................AAGTCGAGGTAAGGGTGATGTC..........................................................................................................................................................................................2211.001.00------------------1.00--------------------------------------------------------------------------------
....................................................................CGCGGATAGCAGAGGAGTTC..................................................................................................................................................................2011.001.00----------------------------------1.00----------------------------------------------------------------
..........................................AAGTCGAGGTAAGGGTGATG............................................................................................................................................................................................2011.001.00-----------------1.00---------------------------------------------------------------------------------
...........................................................................................................................................................CCGGGGTCGCTCCCGGGGA............................................................................191.000.00------------------------------------------------------------------------------------------1.00--------
................................................................................................CTTGCCTAACGAGCAGGAAACTGTGCAT..............................................................................................................................2811.001.00--------------------1.00------------------------------------------------------------------------------
.....................................................................GCGGATAGCAGAGGAGTTCCGGGAA............................................................................................................................................................251.000.00-------------------1.00-------------------------------------------------------------------------------
...........................................................ATGTCGGCTCGCGGATAGCAGAGGAGG....................................................................................................................................................................271.000.00-----------------------------1.00---------------------------------------------------------------------
..................................CGGTGACCAAGTCGAGGTAAG...................................................................................................................................................................................................2111.001.00---------------------------------------------1.00-----------------------------------------------------
................................................AGGTAAGGGTGATGTCGGT.......................................................................................................................................................................................191.000.00---------------------------------------------------------------1.00-----------------------------------
..................................................................CTCGCGGATAGCAGAGGAGTTCCGGG..............................................................................................................................................................2611.001.00---------------------------------------------------------1.00-----------------------------------------
.....................................................AGGGTGATGTCGGCTCGA...................................................................................................................................................................................181.000.00-------------------------------------------------1.00-------------------------------------------------
.............................................TCGAGGTAAGGGTGATGTCGG........................................................................................................................................................................................2111.001.00----------------------1.00----------------------------------------------------------------------------
..................................................GTAAGGGTGATGTCGGCT......................................................................................................................................................................................1811.001.00----------1.00----------------------------------------------------------------------------------------
..............................GGTCCGGTGACCAAGTCGA.........................................................................................................................................................................................................1911.001.00------------------1.00--------------------------------------------------------------------------------
............................................GTCGAGGTAAGGGTGATGTCGGCA......................................................................................................................................................................................241.000.00-----------------------------------------------------------------1.00---------------------------------
...........................................................ATGTCGGCTCGCGGATAGC............................................................................................................................................................................1911.001.00----------------------------------------------------------------------------1.00----------------------
...............................GTCCGGTGACCAAGTCGAGGTAAGGGT................................................................................................................................................................................................2711.001.00----------------------------------------------------------------------------------------1.00----------
................................TCCGGTGACCAAGTCGAGG.......................................................................................................................................................................................................1911.001.00--1.00------------------------------------------------------------------------------------------------
...............................................................................................................................TTCTCGAGTCCTTGGAGA.........................................................................................................1811.001.00------------------------------------------------------------------------------------1.00--------------
.............................................................................................................................................................GGGGTCGCTCCCGGGCAGG..........................................................................191.000.00-------------------------------------1.00-------------------------------------------------------------
.......................TCACAGCGGTCCGGTGACCAAG.............................................................................................................................................................................................................2211.001.00--------------------------------------------------------------------------------1.00------------------
..........................................................GATGTCGGCTCGCGGATAGC............................................................................................................................................................................2011.001.00---------------------------1.00-----------------------------------------------------------------------
....GTTCGCCGGGTGTGAGGC....................................................................................................................................................................................................................................1820.500.50------------------------------------------------------------------------------------------------0.50--
.CAGGTTCGCCGGGTGTGAGGCT...................................................................................................................................................................................................................................2220.500.50-------------------------------------------------------------------------------------------------0.50-
........GCCGGGTGTGAGGCTTCA................................................................................................................................................................................................................................1820.500.50--------0.50------------------------------------------------------------------------------------------
..AGGTTCGCCGGGTGTGAGGC....................................................................................................................................................................................................................................2020.500.500.50--------------------------------------------------------------------------------------------------
.....TTCGCCGGGTGTGAGGCT...................................................................................................................................................................................................................................1820.500.50----0.50----------------------------------------------------------------------------------------------
............GGTGTGAGGCTTCACAGCGGT.........................................................................................................................................................................................................................2120.500.50------------------------------------0.50--------------------------------------------------------------

Antisense strand
GCAGGTTCGCCGGGTGTGAGGCTTCACAGCGGTCCGGTGACCAAGTCGAGGTAAGGGTGATGTCGGCTCGCGGATAGCAGAGGAGTTCCGGGTGATCTTGCCTAACGAGCAGGAAACTGTGCATGGTTTCTCGAGTCCTTGGAGAGTGAAGGCCCCCGGGGTCGCTCCCGGGCACGGAGAGACGATTGGTTCACGGCCTAGTGTTCGGTTTGTTCCCAGTCAGCCCTTGCTGGCCTTGGGTTCAACCGAA
................................................................(((....((((.((...((....))..)).)))).)))......((((....))))..................................................................................................................................
................................................................65..........................................................125...........................................................................................................................
SizePerfect hitTotal NormPerfect NormSRR207116(GSM721078)
Nuclear RNA. (cell line)		SRR207115(GSM721077)
XRN1&2 knockdown. (XRN1/XRN2 cell line)		SRR037944(GSM510482)
293DcrTN_cand5. (cell line)		SRR207110(GSM721072)
Nuclear RNA. (cell line)		SRR033729(GSM497074)
splenic MZL (Splenic414). (B cell)		SRR033712(GSM497057)
Burkitt Lymphoma (BL510). (B cell)		SRR037934(GSM510472)
293cand4_rep3. (cell line)		SRR037943(GSM510481)
293DcrTN. (cell line)		SRR033728(GSM497073)
MALT (MALT413). (B cell)		DRR001488(DRX001042)
"Hela short nuclear cell fraction, LNA(+)". (hela)		SRR033718(GSM497063)
Multiple Myeloma (U266). (B cell)		DRR000555(DRX000313)
"THP-1 whole cell RNA, no treatment". (cell line)		SRR189783DRR000556(DRX000314)
"THP-1 whole cell RNA, after 3 day treatment . (cell line)		TAX577739(Rovira)
total RNA. (breast)		DRR001489(DRX001043)
"Hela short nuclear cell fraction, control". (hela)		SRR029132(GSM416761)
MB-MDA231. (cell line)		SRR033730(GSM497075)
Lymphoblastic (ALL411). (B cell)		SRR037935(GSM510473)
293cand3. (cell line)		SRR033722(GSM497067)
KMS12 cell line (KMS12). (B cell)		DRR000557(DRX000315)
"THP-1 whole cell RNA, after 3 day treatment . (cell line)		SRR342901(SRX096797)
small RNA seq of Left atrial tissue. (heart)		DRR000558(DRX000316)
"THP-1 whole cell RNA, after 3 day treatment . (cell line)		SRR033721(GSM497066)
Ly3 cell line (Ly3). (B cell)		SRR033726(GSM497071)
Mututated CLL (CLLM633). (B cell)		SRR033727(GSM497072)
HIV-positive DL (HIV412). (B cell)		SRR033715(GSM497060)
Mantle Cell Lymphoma (Mino122). (B cell)		TAX577742(Rovira)
total RNA. (breast)		SRR039635(GSM518472)
THP1_nuc_sRNAs. (cell line)		SRR330874(SRX091712)
tissue: skin psoriatic involveddisease state:. (skin)		SRR029130(GSM416759)
DLD2. (cell line)		SRR038860(GSM458543)
MM426. (cell line)		TAX577744(Rovira)
total RNA. (breast)		SRR342898(SRX096794)
small RNA seq of Right atrial tissue. (heart)		SRR039637(GSM518474)
THP1_total_sRNAs. (cell line)		SRR037933(GSM510471)
293cand4_rep2. (cell line)		SRR330864(SRX091702)
tissue: skin psoriatic involveddisease state:. (skin)		RoviraIPAgo2(Rovira)
total RNA. (ago2 breast)		SRR191409(GSM715519)
19genomic small RNA (size selected RNA from t. (breast)		SRR029054(GSM402329)
MCF7_smallRNAseq. (cell line)		SRR330912(SRX091750)
tissue: normal skindisease state: normal. (skin)		GSM532877(GSM532877)
G691N. (cervix)		SRR040030(GSM532915)
G013N. (cervix)		SRR015359(GSM380324)
Germinal Center B cell (GC136). (B cell)		SRR107297(GSM677704)
18-30nt fraction of small RNA. (cell line)		SRR039625(GSM531988)
HBV(-) HCV(-) HCC Tissue Sample. (liver)		SRR191586(GSM715696)
197genomic small RNA (size selected RNA from . (breast)		SRR039190(GSM494809)
PBMCs were isolated by ficoll gradient from t. (blood)		SRR343332(GSM796035)
"KSHV (HHV8), EBV (HHV-4)". (cell line)		SRR040028(GSM532913)
G026N. (cervix)		SRR040011(GSM532896)
G529T. (cervix)		SRR444059(SRX128907)
Sample 17cDNABarcode: AF-PP-339: ACG CTC TTC . (skin)		SRR330863(SRX091701)
tissue: skin psoriatic involveddisease state:. (skin)		SRR033717(GSM497062)
Mentle Cell Lymphoma (MCL112). (B cell)		SRR040016(GSM532901)
G645N. (cervix)		GSM339995(GSM339995)
hues6NP. (cell line)		SRR033710(GSM497055)
GCB DLBCL (GCB385). (B cell)		SRR330891(SRX091729)
tissue: skin psoriatic uninvolveddisease stat. (skin)		SRR191611(GSM715721)
57genomic small RNA (size selected RNA from t. (breast)		SRR343333(GSM796036)
KSHV (HHV8). (cell line)		GSM416733(GSM416733)
HEK293. (cell line)		SRR189782SRR037937(GSM510475)
293cand2. (cell line)		SRR033716(GSM497061)
Mentle Cell Lymphoma (MCL114). (B cell)		SRR189785SRR039192(GSM494811)
K562 cell line is derived from a CML patient . (cell line)		SRR040031(GSM532916)
G013T. (cervix)		SRR037931(GSM510469)
293GFP. (cell line)		SRR060982(GSM569186)
Human centrocyte [09-001]. (cell line)		TAX577741(Rovira)
total RNA. (breast)		SRR189779(GSM714639)
cell line: HEK293clip variant: PAR-CLIPenzyma. (cell line)		SRR040025(GSM532910)
G613T. (cervix)		SRR029127(GSM416756)
A549. (cell line)		SRR037932(GSM510470)
293cand4_rep1. (cell line)		SRR033732(GSM497077)
bjab cell line (bjab103). (B cell)		SRR330871(SRX091709)
tissue: skin psoriatic involveddisease state:. (skin)		SRR330919(SRX091757)
tissue: normal skindisease state: normal. (skin)		SRR039193(GSM494812)
HL60 cell line is derived from acute promyelo. (cell line)		SRR191548(GSM715658)
101genomic small RNA (size selected RNA from . (breast)		SRR037941(GSM510479)
293DroshaTN. (cell line)		SRR191411(GSM715521)
21genomic small RNA (size selected RNA from t. (breast)		SRR191624(GSM715734)
31genomic small RNA (size selected RNA from t. (breast)		TAX577579(Rovira)
total RNA. (breast)		SRR330877(SRX091715)
tissue: skin psoriatic involveddisease state:. (skin)		SRR330858(SRX091696)
tissue: skin psoriatic involveddisease state:. (skin)		SRR330894(SRX091732)
tissue: skin psoriatic uninvolveddisease stat. (skin)		TAX577589(Rovira)
total RNA. (breast)		SRR326282(GSM769512)
"Dicer mRNA was knocked down using siDicer, t. (cell line)		SRR342897(SRX096793)
small RNA seq of Left atrial tissue. (heart)		SRR040024(GSM532909)
G613N. (cervix)		SRR326280(GSM769510)
total cell content of unperturbed cells was s. (cell line)		SRR330916(SRX091754)
tissue: normal skindisease state: normal. (skin)		SRR330895(SRX091733)
tissue: skin psoriatic uninvolveddisease stat. (skin)		SRR060981(GSM569185)
Human centroblast [09-001]. (cell line)		SRR191394(GSM715504)
23genomic small RNA (size selected RNA from t. (breast)		SRR040015(GSM532900)
G623T. (cervix)		SRR553573(SRX182779)
source: Cerebellum. (Cerebellum)		SRR038861(GSM458544)
MM466. (cell line)		SRR553572(SRX182778)
source: Frontal Cortex. (Frontal Cortex)
.................................................................................................................................................................................................................GGCTGACTGGGAACAA......................... 1630.330.33--------------------------------------------------------------------------------------------------0.33