ID: uc002kxk.1_intron_3_0_chr18_29890287_r.3p
GENE: (2)
chr18:29890237-29890486-


(1)
AGO1.ip
(1)
AGO2.ip
(1)
B-CELL
(3)
BRAIN
(20)
BREAST
(18)
CELL-LINE
(1)
CERVIX
(1)
HEART
(4)
LIVER
(1)
OTHER
(3)
OVARY
(64)
SKIN
(1)
TESTES
(2)
UTERUS

Sense strand
TTTCATTTTTAAGCTGATTTTAAAATCTATCTATCTTCTAGTTTAATGGAACCTCCCATAATGCCTTTTTAAAAAGATTAATGATGAACAGGAATCTTTGACAAAAAAAGGGCTGGGGTAAAGAGAGAGGATGTTGTTGCCATGGTAACAGCAGTCCAGCATAAACATCTTAGATCTCTTCTGTTTATCCTGTGTTTTAGGGCAATTCAAGCTGCTGGAACAAGACCGAGATATAAAGGAGCCAGTGCAA
....................................................................................................................................((((((((....))))))))..................................................................................................
................................................................................................97.....................................................152................................................................................................
SizePerfect hitTotal NormPerfect NormSRR189782SRR189784SRR326279(GSM769509)
cytoplasmic fraction was isolated using PARIS. (cell line)
SRR326281(GSM769511)
"Dicer mRNA was knocked down using siDicer, c. (cell line)
SRR330874(SRX091712)
tissue: skin psoriatic involveddisease state:. (skin)
SRR189783SRR553576(SRX182782)
source: Testis. (testes)
SRR039622(GSM531985)
HCV(+) Adjacent Tissue Sample. (liver)
SRR553572(SRX182778)
source: Frontal Cortex. (Frontal Cortex)
SRR189785SRR343332(GSM796035)
"KSHV (HHV8), EBV (HHV-4)". (cell line)
SRR039623(GSM531986)
HCV(+) HCC Tissue Sample. (liver)
SRR330887(SRX091725)
tissue: skin psoriatic uninvolveddisease stat. (skin)
SRR330908(SRX091746)
tissue: normal skindisease state: normal. (skin)
RoviraIPAgo2(Rovira)
total RNA. (ago2 breast)
SRR343334SRR330865(SRX091703)
tissue: skin psoriatic involveddisease state:. (skin)
SRR029128(GSM416757)
H520. (cell line)
DRR000559(DRX000317)
"THP-1 whole cell RNA, no treatment". (cell line)
GSM450605(GSM450605)
miRNA sequencing raw reads from post-mortem s. (brain)
SRR330921(SRX091759)
tissue: normal skindisease state: normal. (skin)
SRR330889(SRX091727)
tissue: skin psoriatic uninvolveddisease stat. (skin)
SRR330890(SRX091728)
tissue: skin psoriatic uninvolveddisease stat. (skin)
SRR330893(SRX091731)
tissue: skin psoriatic uninvolveddisease stat. (skin)
SRR330915(SRX091753)
tissue: normal skindisease state: normal. (skin)
SRR330880(SRX091718)
tissue: skin psoriatic involveddisease state:. (skin)
SRR330914(SRX091752)
tissue: normal skindisease state: normal. (skin)
SRR330904(SRX091742)
tissue: normal skindisease state: normal. (skin)
SRR330901(SRX091739)
tissue: skin psoriatic uninvolveddisease stat. (skin)
SRR330916(SRX091754)
tissue: normal skindisease state: normal. (skin)
SRR330859(SRX091697)
tissue: skin psoriatic involveddisease state:. (skin)
SRR330903(SRX091741)
tissue: skin psoriatic uninvolveddisease stat. (skin)
SRR330906(SRX091744)
tissue: normal skindisease state: normal. (skin)
SRR189779(GSM714639)
cell line: HEK293clip variant: PAR-CLIPenzyma. (cell line)
SRR330919(SRX091757)
tissue: normal skindisease state: normal. (skin)
SRR191595(GSM715705)
72genomic small RNA (size selected RNA from t. (breast)
SRR330894(SRX091732)
tissue: skin psoriatic uninvolveddisease stat. (skin)
TAX577738(Rovira)
total RNA. (breast)
DRR000558(DRX000316)
"THP-1 whole cell RNA, after 3 day treatment . (cell line)
SRR330884(SRX091722)
tissue: skin psoriatic uninvolveddisease stat. (skin)
SRR330912(SRX091750)
tissue: normal skindisease state: normal. (skin)
SRR191528(GSM715638)
130genomic small RNA (size selected RNA from . (breast)
GSM379267(GSM379267)
Small RNA from clear cell ovarian cancer tissue. (ovary)
GSM450606(GSM450606)
miRNA sequencing raw reads from post-mortem s. (brain)
SRR330883(SRX091721)
tissue: skin psoriatic uninvolveddisease stat. (skin)
DRR000555(DRX000313)
"THP-1 whole cell RNA, no treatment". (cell line)
SRR191613(GSM715723)
66genomic small RNA (size selected RNA from t. (breast)
SRR191590(GSM715700)
48genomic small RNA (size selected RNA from t. (breast)
SRR040028(GSM532913)
G026N. (cervix)
SRR191607(GSM715717)
192genomic small RNA (size selected RNA from . (breast)
SRR330863(SRX091701)
tissue: skin psoriatic involveddisease state:. (skin)
SRR343336DRR000556(DRX000314)
"THP-1 whole cell RNA, after 3 day treatment . (cell line)
SRR330898(SRX091736)
tissue: skin psoriatic uninvolveddisease stat. (skin)
SRR191606(GSM715716)
84genomic small RNA (size selected RNA from t. (breast)
SRR330896(SRX091734)
tissue: skin psoriatic uninvolveddisease stat. (skin)
SRR015447(SRR015447)
nuclear small RNAs. (breast)
SRR191559(GSM715669)
65genomic small RNA (size selected RNA from t. (breast)
SRR189780(GSM714640)
cell line: HEK293clip variant: PAR-CLIPenzyma. (cell line)
SRR191456(GSM715566)
182genomic small RNA (size selected RNA from . (breast)
GSM379265(GSM379265)
Small RNA from endometrioid ovarian cancer tissue. (ovary)
GSM450602(GSM450602)
miRNA sequencing raw reads from post-mortem s. (brain)
GSM379268(GSM379268)
Small RNA from serous ovarian cancer tissue. (ovary)
SRR342897(SRX096793)
small RNA seq of Left atrial tissue. (heart)
SRR189776(GSM714636)
cell line: HEK293clip variant: CLIPenzymatic . (cell line)
DRR000560(DRX000318)
Isolation of RNA following immunoprecipitatio. (ago1 cell line)
SRR387909(GSM843861)
specific-host: Homo sapienshost cell line: Su. (cell line)
SRR343337SRR189777(GSM714637)
cell line: HEK293clip variant: PAR-CLIPenzyma. (cell line)
SRR189781(GSM714641)
cell line: HEK293clip variant: PAR-CLIPenzyma. (cell line)
SRR444062(SRX128910)
Sample 27_3cDNABarcode: AF-PP-343: ACG CTC TT. (skin)
SRR330872(SRX091710)
tissue: skin psoriatic involveddisease state:. (skin)
SRR330905(SRX091743)
tissue: normal skindisease state: normal. (skin)
SRR330922(SRX091760)
tissue: normal skindisease state: normal. (skin)
SRR330891(SRX091729)
tissue: skin psoriatic uninvolveddisease stat. (skin)
SRR330869(SRX091707)
tissue: skin psoriatic involveddisease state:. (skin)
SRR330868(SRX091706)
tissue: skin psoriatic involveddisease state:. (skin)
SRR330866(SRX091704)
tissue: skin psoriatic involveddisease state:. (skin)
SRR444055(SRX128903)
Sample 27_2cDNABarcode: AF-PP-343: ACG CTC TT. (skin)
SRR039620(GSM531983)
HBV(+) Adjacent Tissue Sample 2. (liver)
SRR444042(SRX128890)
Sample 3cDNABarcode: AF-PP-335: ACG CTC TTC C. (skin)
SRR330907(SRX091745)
tissue: normal skindisease state: normal. (skin)
SRR191630(GSM715740)
70genomic small RNA (size selected RNA from t. (breast)
SRR330864(SRX091702)
tissue: skin psoriatic involveddisease state:. (skin)
TAX577740(Rovira)
total RNA. (breast)
SRR330885(SRX091723)
tissue: skin psoriatic uninvolveddisease stat. (skin)
SRR343333(GSM796036)
KSHV (HHV8). (cell line)
SRR444047(SRX128895)
Sample 27_1cDNABarcode: AF-PP-343: ACG CTC TT. (skin)
SRR330860(SRX091698)
tissue: skin psoriatic involveddisease state:. (skin)
SRR330862(SRX091700)
tissue: skin psoriatic involveddisease state:. (skin)
SRR444061(SRX128909)
Sample 19cDNABarcode: AF-PP-341: ACG CTC TTC . (skin)
TAX577580(Rovira)
total RNA. (breast)
SRR207110(GSM721072)
Nuclear RNA. (cell line)
SRR330900(SRX091738)
tissue: skin psoriatic uninvolveddisease stat. (skin)
SRR330913(SRX091751)
tissue: normal skindisease state: normal. (skin)
SRR094130(GSM651906)
small RNA(18-35nt)small RNA deep sequencing o. (uterus)
SRR330892(SRX091730)
tissue: skin psoriatic uninvolveddisease stat. (skin)
SRR330917(SRX091755)
tissue: normal skindisease state: normal. (skin)
SRR330871(SRX091709)
tissue: skin psoriatic involveddisease state:. (skin)
SRR330899(SRX091737)
tissue: skin psoriatic uninvolveddisease stat. (skin)
SRR330861(SRX091699)
tissue: skin psoriatic involveddisease state:. (skin)
SRR330878(SRX091716)
tissue: skin psoriatic involveddisease state:. (skin)
SRR330920(SRX091758)
tissue: normal skindisease state: normal. (skin)
SRR330895(SRX091733)
tissue: skin psoriatic uninvolveddisease stat. (skin)
SRR039624(GSM531987)
HBV(-) HCV(-) Adjacent Tissue Sample. (liver)
SRR330867(SRX091705)
tissue: skin psoriatic involveddisease state:. (skin)
SRR094129(GSM651905)
small RNA(18-35nt)small RNA deep sequencing o. (uterus)
SRR330873(SRX091711)
tissue: skin psoriatic involveddisease state:. (skin)
SRR330879(SRX091717)
tissue: skin psoriatic involveddisease state:. (skin)
SRR033722(GSM497067)
KMS12 cell line (KMS12). (B cell)
SRR191633(GSM715743)
85genomic small RNA (size selected RNA from t. (breast)
SRR330882(SRX091720)
tissue: skin psoriatic uninvolveddisease stat. (skin)
SRR330923(SRX091761)
tissue: normal skindisease state: normal. (skin)
SRR330875(SRX091713)
tissue: skin psoriatic involveddisease state:. (skin)
TAX577590(Rovira)
total RNA. (breast)
SRR191439(GSM715549)
176genomic small RNA (size selected RNA from . (breast)
TAX577579(Rovira)
total RNA. (breast)
SRR330902(SRX091740)
tissue: skin psoriatic uninvolveddisease stat. (skin)
TAX577743(Rovira)
total RNA. (breast)
SRR330881(SRX091719)
tissue: skin psoriatic uninvolveddisease stat. (skin)
SRR191592(GSM715702)
59genomic small RNA (size selected RNA from t. (breast)
SRR444049(SRX128897)
Sample 9cDNABarcode: AF-PP-334: ACG CTC TTC C. (skin)
SRR330911(SRX091749)
tissue: normal skindisease state: normal. (skin)
SRR330897(SRX091735)
tissue: skin psoriatic uninvolveddisease stat. (skin)
SRR207116(GSM721078)
Nuclear RNA. (cell line)
SRR330876(SRX091714)
tissue: skin psoriatic involveddisease state:. (skin)
...................................................................................................................................TGTTGTTGCCATGGTAA......................................................................................................17650.6750.67--13.008.173.170.170.17-----0.501.17------0.500.830.670.500.501.331.171.330.330.330.331.170.17-0.170.170.17--0.500.83-----------------------------0.670.830.830.500.500.670.500.500.33-0.170.50-0.50-0.33-0.330.170.170.33-0.330.330.330.33-0.330.330.330.330.330.330.33-0.170.170.170.17-0.170.170.170.170.17--0.170.17-------
..........................................................................................................................................................................................................................AACAAGACCGAGATATAAAG............20124.0024.0016.004.00-------2.00-----------------------------------------1.00---------------1.00----------------------------------------------------------
..........................................................................................................................................................................................................................AACAAGACCGAGATAAAG..............1821.000.0017.002.00---1.00---------1.00--------------------------------------------------------------------------------------------------------------
..........................................................................................................................................................................................................................AACAAGACCGAGATAAAAG.............1919.000.002.0016.00-------------1.00--------------------------------------------------------------------------------------------------------------
...................................................................................................................................TGTTGTTGCCATGGT........................................................................................................1506.006.00------------------2.00-------------------1.00------1.00------1.00------------1.00------------------------------------------------------------
....................................................................................................................................GTTGTTGCCATGGTAA......................................................................................................1695.445.44--1.110.440.33-----0.33---------0.11--0.11-0.110.22----0.11-------0.110.22-----------------------------0.22--0.22--0.110.110.22------0.11-0.110.110.22------0.33----------------------0.11-0.110.11--0.11
.................................................................................................................................GATGTTGTTGCCATGGTA.......................................................................................................1813.003.00---------------------1.00------1.00-------------------------------1.00-----------------------------------------------------------------
...................................................................................................................................TGTTGTTGCCATGGTAACCCT..................................................................................................213.000.00-1.00-----------1.00--1.00-------------------------------------------------------------------------------------------------------------
..........................................................................................................................................................................................................CAATTCAAGCTGCTGGAACAAGACCGAGATAAAG..............343.000.00-----3.00------------------------------------------------------------------------------------------------------------------------
.......................................................................................................................................................................................................................TGGAACAAGACCGAGATATAAAGGAGC........2712.002.00------2.00-----------------------------------------------------------------------------------------------------------------------
..............................................................................................................................................................................................................TCAAGCTGCTGGAACAAGACCGA.....................2312.002.00--------------2.00---------------------------------------------------------------------------------------------------------------
.................................................................................................................................GATGTTGTTGCCATGGTAAT.....................................................................................................202.000.00----------------1.00---------------------------------------------1.00---------------------------------------------------------------
...........................................................................................................................................................................................................................ACAAGACCGAGATATAAAG............1912.002.002.00-----------------------------------------------------------------------------------------------------------------------------
...................................................................................................................................TGTTGTTGCCATGGTACTC....................................................................................................192.000.00-----------------------------------1.00---------------------1.00--------------------------------------------------------------------
...................................................................................................................................TGTTGTTGCCATGGTACTCC...................................................................................................202.000.00-----------------------------------------1.00------1.00-----------------------------------------------------------------------------
..........................................................................................................................................................................................................................AACAAGACCGAGATATAAA.............1912.002.002.00-----------------------------------------------------------------------------------------------------------------------------
..........................................................................................................................................................................................................................AACAAGACCGAGATACAAA.............192.000.00-2.00----------------------------------------------------------------------------------------------------------------------------
..................................................................................................................................ATGTTGTTGCCATGGTAAT.....................................................................................................192.000.00--------------------1.00--------------------------1.00------------------------------------------------------------------------------
....................................................................................................................................GTTGTTGCCATGGTACTC....................................................................................................182.000.00----------1.00-------------------------------------------1.00-----------------------------------------------------------------------
....................................................................................................................................GTTGTTGCCATGGTAATA....................................................................................................1891.225.44-------0.22--0.220.44-------------------------------------------------------------------0.22------------------------0.11---------------------
.............................................................................................................................AGAGGATGTTGTTGCAGTG..........................................................................................................191.000.00----------------------------------------------------------1.00-------------------------------------------------------------------
.............................................................................................................................................................................................................TTCAAGCTGCTGGAACAAGACCGAGA...................2611.001.00------1.00-----------------------------------------------------------------------------------------------------------------------
.................................................................................................................................................................................................................AGCTGCTGGAACAAGACCGAGATATAAAGGA..........3111.001.00--------1.00---------------------------------------------------------------------------------------------------------------------
.......................................................................................................................................................CAGTCCAGCATAAACATCT................................................................................1911.001.00--------------------------------------------------1.00---------------------------------------------------------------------------
.....................................................................................................CAAAAAAAGGGCTGGGAAC..................................................................................................................................191.000.00-------1.00----------------------------------------------------------------------------------------------------------------------
..........................................................................................................................................................................................................................AACAAGACCGAGATATAAAT............2011.002.001.00-----------------------------------------------------------------------------------------------------------------------------
...................................................................................................GACAAAAAAAGGGCTGGG.....................................................................................................................................1811.001.00--------1.00---------------------------------------------------------------------------------------------------------------------
..................................................................................................................................................................................................................................CGAGATATAAAGGAGCCAG.....1911.001.00-------1.00----------------------------------------------------------------------------------------------------------------------
...........................................................................................................................................CCATGGTAACAGCAGTTGGA...........................................................................................201.000.00-------------------------------------1.00----------------------------------------------------------------------------------------
..................................................................................................................GGGGTAAAGAGAGAGGATGTTGTTGC..............................................................................................................2611.001.00-----------------------------------------------------1.00------------------------------------------------------------------------
......................................................................................AACAGGAATCTTTGACAAAA................................................................................................................................................2011.001.00------------------------------------1.00-----------------------------------------------------------------------------------------
...................................................................................................................................TGTTGTTGCCATGGTAACC....................................................................................................191.000.00-----------------------------------------------------------1.00------------------------------------------------------------------
...........................................................................................................................................................................................................................ACAAGACCGAGATATATAG............191.000.00-1.00----------------------------------------------------------------------------------------------------------------------------
......................................................................................................................................................................................................................CTGGAACAAGACCGAGATATAAAG............2411.001.00-------------------------------------------------------1.00----------------------------------------------------------------------
..........................................................................................................................................................................................................................AACAAGACCGAGATAA................161.000.001.00-----------------------------------------------------------------------------------------------------------------------------
...................................................................................................................................TGTTGTTGCCATGGTAGT.....................................................................................................181.000.00-----------------------1.00------------------------------------------------------------------------------------------------------
....................................................................................................................................GTTGTTGCCATGGTACTCC...................................................................................................191.000.00----------------------------------------------1.00-------------------------------------------------------------------------------
.............................................................................................................................................................................................................TTCAAGCTGCTGGAACAAGA.........................2011.001.00---------------------------------------------------------------1.00--------------------------------------------------------------
..........................................................................................................................................................................................................................AACAAGACCGAGATATAAAGGAG.........2311.001.00---------1.00--------------------------------------------------------------------------------------------------------------------
.....................................................................................................................................TTGTTGCCATGGTAATCCA..................................................................................................191.000.00----1.00-------------------------------------------------------------------------------------------------------------------------
...................................................................................................................................TGTTGTTGCCATGGTGAA.....................................................................................................1801.006.00------------------------1.00-----------------------------------------------------------------------------------------------------
....................................................................................................................................................................................................................TGCTGGAACAAGACCGAGATATAAA.............2511.001.00------1.00-----------------------------------------------------------------------------------------------------------------------
...................................................................................................................................TGTTGTTGCCATGGTCTGC....................................................................................................1901.006.00----------------------1.00-------------------------------------------------------------------------------------------------------
....................TAAAATCTATCTATCTTCAATT................................................................................................................................................................................................................221.000.00--------------------------------------------------------------------1.00---------------------------------------------------------
................................................................................................................................................................................................................AAGCTGCTGGAACAAGACCGAGATA.................2511.001.00-------------------------------------------------------------1.00----------------------------------------------------------------
...................................................................................................................................TGTTGTTGCCATGGTATCC....................................................................................................191.000.00------------------------------1.00-----------------------------------------------------------------------------------------------
.................................................................................................................................GATGTTGTTGCCATGGTAATC....................................................................................................211.000.00------------------------------------------1.00-----------------------------------------------------------------------------------
..............................................................................TAATGATGAACAGGAACAG.........................................................................................................................................................191.000.00---------------------------------1.00--------------------------------------------------------------------------------------------
.................................................................................................................................................................................................................AGCTGCTGGAACAAGACCGAGATAT................2511.001.00-------------------------------------------1.00----------------------------------------------------------------------------------
...................................................................................................................................TGTTGTTGCCATGGTAGTC....................................................................................................191.000.00------------------------------------------------------------------1.00-----------------------------------------------------------
...................................................................................................................................TGTTGTTGCCATGGTACGAG...................................................................................................201.000.00--------------------------------------------1.00---------------------------------------------------------------------------------
................................................................................................................................................................................................................AAGCTGCTGGAACAAGACCGAGA...................2311.001.00-------------------1.00----------------------------------------------------------------------------------------------------------
.................TTTTAAAATCTATCTAATG......................................................................................................................................................................................................................191.000.00---------------------------------------------------------------------1.00--------------------------------------------------------
...........................................................................................................................................................................................................................ACAAGACCGAGATATAAAGGAGC........2311.001.001.00-----------------------------------------------------------------------------------------------------------------------------
..................................................................................................................................ATGTTGTTGCCATGGTAATCC...................................................................................................211.000.00--------------------------------------------------------1.00---------------------------------------------------------------------
.............................................................................................................................................................................................................TTCAAGCTGCTGGAACAAGAC........................2111.001.00-------1.00----------------------------------------------------------------------------------------------------------------------
...................................................................................................................................TGTTGTTGCCATGGTAGAGG...................................................................................................201.000.00----------------------------------1.00-------------------------------------------------------------------------------------------
...............................TATCTTCTAGTTTAAACGT........................................................................................................................................................................................................191.000.001.00-----------------------------------------------------------------------------------------------------------------------------
...............................................................................................................................................................................................................CAAGCTGCTGGAACAAGACCG......................2111.001.00--------------------------------1.00---------------------------------------------------------------------------------------------
....................................................................................................................................GTTGTTGCCATGGTATCCT...................................................................................................191.000.00----------1.00-------------------------------------------------------------------------------------------------------------------
.............................................................................................................................................................................................................TTCAAGCTGCTGGAACAAG..........................1911.001.00-------------------1.00----------------------------------------------------------------------------------------------------------
.......................................................................................................AAAAAAGGGCTGGGGTAAAGA..............................................................................................................................2111.001.00-----------1.00------------------------------------------------------------------------------------------------------------------
................................................................................................................................................................................................................AAGCTGCTGGAACAAGACCGAGATATAAAGGAGC........3411.001.00--------1.00---------------------------------------------------------------------------------------------------------------------
..........................................................................................................................................................................................................................AACAAGACCGAGATAAATA.............191.000.001.00-----------------------------------------------------------------------------------------------------------------------------
.................................................................................................................................GATGTTGTTGCCATGG.........................................................................................................1611.001.00-----------------------------1.00------------------------------------------------------------------------------------------------
...................................................................................................................................TGTTGTTGCCATGGTAGG.....................................................................................................181.000.00------------1.00-----------------------------------------------------------------------------------------------------------------
...................................................................................................................................TGTTGTTGCCATGGTAACCCTG.................................................................................................221.000.00------------1.00-----------------------------------------------------------------------------------------------------------------
.....................................................................................................................................................................................................................GCTGGAACAAGACCGAGAT..................1911.001.00-----------1.00------------------------------------------------------------------------------------------------------------------
....................................................................................................................................GTTGTTGCCATGGTAATCCA..................................................................................................2090.675.44----------0.22---------------------------------------------------------------------------0.33---------------------------------0.11-----
..........................................................................................................................................................................................................CAATTCAAGCTGCTGGAAC.............................1920.500.50----------------------------------------------------------------------------------0.50-------------------------------------------
.........................................................................................................................................................................................................GCAATTCAAGCTGCTGGA...............................1820.500.50---------------------------------------0.50--------------------------------------------------------------------------------------
...................................................................................................................................TGTTGTTGCCATGGTAATA....................................................................................................1960.3350.67-----------0.17-------------------------------------------------------------------0.17----------------------------------------------
.........................................................................................................................................................................TTAGATCTCTTCTGTTTA...............................................................1830.330.33-------------------------------------------------------------------------------------------0.33----------------------------------
...................................................................................................................................TGTTGTTGCCATGGTAATAA...................................................................................................2060.3350.67-------------------------------------0.17----------------------------------------------0.17-----------------------------------------
...................................................................................................................................TGTTGTTGCCATGGTAATCG...................................................................................................2060.3350.67--------------------------------------------------------------------------------0.33---------------------------------------------
...................................................................................................................................TGTTGTTGCCATGGTAATCGT..................................................................................................2160.3350.67-------0.17-----------------------------------------------------------------------------------------------------------0.17----------
...................................................................................................................................TGTTGTTGCCATGGTAATT....................................................................................................1960.3350.67--------------------0.17-----------------------------------------------------0.17---------------------------------------------------
....................................................................................................................................GTTGTTGCCATGGTAATT....................................................................................................1890.225.44--------------------------------------0.11-----------------------------------------------------------------0.11---------------------
...................................................................................................................................TGTTGTTGCCATGGTAATTCC..................................................................................................2160.1750.67--------------------------------------------------------------------------------------------------------------------0.17---------
...................................................................................................................................TGTTGTTGCCATGGTAATTC...................................................................................................2060.1750.67-----------0.17------------------------------------------------------------------------------------------------------------------
...................................................................................................................................TGTTGTTGCCATGGTAATCT...................................................................................................2060.1750.67------------0.17-----------------------------------------------------------------------------------------------------------------
...................................................................................................................................TGTTGTTGCCATGGTAATGAT..................................................................................................2160.1750.67-------------------------------------------------------------------------------0.17----------------------------------------------
...................................................................................................................................TGTTGTTGCCATGGTAATTCT..................................................................................................2160.1750.67------------------------------------------------------------------------------------0.17-----------------------------------------
...................................................................................................................................TGTTGTTGCCATGGTAATCTT..................................................................................................2160.1750.67----------------------------------------------------------------------------------------0.17-------------------------------------
...................................................................................................................................TGTTGTTGCCATGGTAATCCA..................................................................................................2160.1750.67-------------------------------------------------------------------------------------------------------------0.17----------------
...................................................................................................................................TGTTGTTGCCATGGTAATGCT..................................................................................................2160.1750.67---------------------------------0.17--------------------------------------------------------------------------------------------
...................................................................................................................................TGTTGTTGCCATGGTAATTA...................................................................................................2060.1750.67------------------------------------------------------------------------------------0.17-----------------------------------------
....................................................................................................................................GTTGTTGCCATGGTAATCGT..................................................................................................2090.115.44---------------------------------------------------------------------------------------------------------------------------0.11--
....................................................................................................................................GTTGTTGCCATGGTAATTC...................................................................................................1990.115.44--------------------0.11---------------------------------------------------------------------------------------------------------
....................................................................................................................................GTTGTTGCCATGGTAATACT..................................................................................................2090.115.44--------------------------------------------------------------------------------------0.11---------------------------------------
....................................................................................................................................GTTGTTGCCATGGTAAGA....................................................................................................1890.115.44----------------------------------------------------------------------------------------------------------------------------0.11-

Antisense strand
TTTCATTTTTAAGCTGATTTTAAAATCTATCTATCTTCTAGTTTAATGGAACCTCCCATAATGCCTTTTTAAAAAGATTAATGATGAACAGGAATCTTTGACAAAAAAAGGGCTGGGGTAAAGAGAGAGGATGTTGTTGCCATGGTAACAGCAGTCCAGCATAAACATCTTAGATCTCTTCTGTTTATCCTGTGTTTTAGGGCAATTCAAGCTGCTGGAACAAGACCGAGATATAAAGGAGCCAGTGCAA
....................................................................................................................................((((((((....))))))))..................................................................................................
................................................................................................97.....................................................152................................................................................................
SizePerfect hitTotal NormPerfect NormSRR189782SRR189784SRR326279(GSM769509)
cytoplasmic fraction was isolated using PARIS. (cell line)
SRR326281(GSM769511)
"Dicer mRNA was knocked down using siDicer, c. (cell line)
SRR330874(SRX091712)
tissue: skin psoriatic involveddisease state:. (skin)
SRR189783SRR553576(SRX182782)
source: Testis. (testes)
SRR039622(GSM531985)
HCV(+) Adjacent Tissue Sample. (liver)
SRR553572(SRX182778)
source: Frontal Cortex. (Frontal Cortex)
SRR189785SRR343332(GSM796035)
"KSHV (HHV8), EBV (HHV-4)". (cell line)
SRR039623(GSM531986)
HCV(+) HCC Tissue Sample. (liver)
SRR330887(SRX091725)
tissue: skin psoriatic uninvolveddisease stat. (skin)
SRR330908(SRX091746)
tissue: normal skindisease state: normal. (skin)
RoviraIPAgo2(Rovira)
total RNA. (ago2 breast)
SRR343334SRR330865(SRX091703)
tissue: skin psoriatic involveddisease state:. (skin)
SRR029128(GSM416757)
H520. (cell line)
DRR000559(DRX000317)
"THP-1 whole cell RNA, no treatment". (cell line)
GSM450605(GSM450605)
miRNA sequencing raw reads from post-mortem s. (brain)
SRR330921(SRX091759)
tissue: normal skindisease state: normal. (skin)
SRR330889(SRX091727)
tissue: skin psoriatic uninvolveddisease stat. (skin)
SRR330890(SRX091728)
tissue: skin psoriatic uninvolveddisease stat. (skin)
SRR330893(SRX091731)
tissue: skin psoriatic uninvolveddisease stat. (skin)
SRR330915(SRX091753)
tissue: normal skindisease state: normal. (skin)
SRR330880(SRX091718)
tissue: skin psoriatic involveddisease state:. (skin)
SRR330914(SRX091752)
tissue: normal skindisease state: normal. (skin)
SRR330904(SRX091742)
tissue: normal skindisease state: normal. (skin)
SRR330901(SRX091739)
tissue: skin psoriatic uninvolveddisease stat. (skin)
SRR330916(SRX091754)
tissue: normal skindisease state: normal. (skin)
SRR330859(SRX091697)
tissue: skin psoriatic involveddisease state:. (skin)
SRR330903(SRX091741)
tissue: skin psoriatic uninvolveddisease stat. (skin)
SRR330906(SRX091744)
tissue: normal skindisease state: normal. (skin)
SRR189779(GSM714639)
cell line: HEK293clip variant: PAR-CLIPenzyma. (cell line)
SRR330919(SRX091757)
tissue: normal skindisease state: normal. (skin)
SRR191595(GSM715705)
72genomic small RNA (size selected RNA from t. (breast)
SRR330894(SRX091732)
tissue: skin psoriatic uninvolveddisease stat. (skin)
TAX577738(Rovira)
total RNA. (breast)
DRR000558(DRX000316)
"THP-1 whole cell RNA, after 3 day treatment . (cell line)
SRR330884(SRX091722)
tissue: skin psoriatic uninvolveddisease stat. (skin)
SRR330912(SRX091750)
tissue: normal skindisease state: normal. (skin)
SRR191528(GSM715638)
130genomic small RNA (size selected RNA from . (breast)
GSM379267(GSM379267)
Small RNA from clear cell ovarian cancer tissue. (ovary)
GSM450606(GSM450606)
miRNA sequencing raw reads from post-mortem s. (brain)
SRR330883(SRX091721)
tissue: skin psoriatic uninvolveddisease stat. (skin)
DRR000555(DRX000313)
"THP-1 whole cell RNA, no treatment". (cell line)
SRR191613(GSM715723)
66genomic small RNA (size selected RNA from t. (breast)
SRR191590(GSM715700)
48genomic small RNA (size selected RNA from t. (breast)
SRR040028(GSM532913)
G026N. (cervix)
SRR191607(GSM715717)
192genomic small RNA (size selected RNA from . (breast)
SRR330863(SRX091701)
tissue: skin psoriatic involveddisease state:. (skin)
SRR343336DRR000556(DRX000314)
"THP-1 whole cell RNA, after 3 day treatment . (cell line)
SRR330898(SRX091736)
tissue: skin psoriatic uninvolveddisease stat. (skin)
SRR191606(GSM715716)
84genomic small RNA (size selected RNA from t. (breast)
SRR330896(SRX091734)
tissue: skin psoriatic uninvolveddisease stat. (skin)
SRR015447(SRR015447)
nuclear small RNAs. (breast)
SRR191559(GSM715669)
65genomic small RNA (size selected RNA from t. (breast)
SRR189780(GSM714640)
cell line: HEK293clip variant: PAR-CLIPenzyma. (cell line)
SRR191456(GSM715566)
182genomic small RNA (size selected RNA from . (breast)
GSM379265(GSM379265)
Small RNA from endometrioid ovarian cancer tissue. (ovary)
GSM450602(GSM450602)
miRNA sequencing raw reads from post-mortem s. (brain)
GSM379268(GSM379268)
Small RNA from serous ovarian cancer tissue. (ovary)
SRR342897(SRX096793)
small RNA seq of Left atrial tissue. (heart)
SRR189776(GSM714636)
cell line: HEK293clip variant: CLIPenzymatic . (cell line)
DRR000560(DRX000318)
Isolation of RNA following immunoprecipitatio. (ago1 cell line)
SRR387909(GSM843861)
specific-host: Homo sapienshost cell line: Su. (cell line)
SRR343337SRR189777(GSM714637)
cell line: HEK293clip variant: PAR-CLIPenzyma. (cell line)
SRR189781(GSM714641)
cell line: HEK293clip variant: PAR-CLIPenzyma. (cell line)
SRR444062(SRX128910)
Sample 27_3cDNABarcode: AF-PP-343: ACG CTC TT. (skin)
SRR330872(SRX091710)
tissue: skin psoriatic involveddisease state:. (skin)
SRR330905(SRX091743)
tissue: normal skindisease state: normal. (skin)
SRR330922(SRX091760)
tissue: normal skindisease state: normal. (skin)
SRR330891(SRX091729)
tissue: skin psoriatic uninvolveddisease stat. (skin)
SRR330869(SRX091707)
tissue: skin psoriatic involveddisease state:. (skin)
SRR330868(SRX091706)
tissue: skin psoriatic involveddisease state:. (skin)
SRR330866(SRX091704)
tissue: skin psoriatic involveddisease state:. (skin)
SRR444055(SRX128903)
Sample 27_2cDNABarcode: AF-PP-343: ACG CTC TT. (skin)
SRR039620(GSM531983)
HBV(+) Adjacent Tissue Sample 2. (liver)
SRR444042(SRX128890)
Sample 3cDNABarcode: AF-PP-335: ACG CTC TTC C. (skin)
SRR330907(SRX091745)
tissue: normal skindisease state: normal. (skin)
SRR191630(GSM715740)
70genomic small RNA (size selected RNA from t. (breast)
SRR330864(SRX091702)
tissue: skin psoriatic involveddisease state:. (skin)
TAX577740(Rovira)
total RNA. (breast)
SRR330885(SRX091723)
tissue: skin psoriatic uninvolveddisease stat. (skin)
SRR343333(GSM796036)
KSHV (HHV8). (cell line)
SRR444047(SRX128895)
Sample 27_1cDNABarcode: AF-PP-343: ACG CTC TT. (skin)
SRR330860(SRX091698)
tissue: skin psoriatic involveddisease state:. (skin)
SRR330862(SRX091700)
tissue: skin psoriatic involveddisease state:. (skin)
SRR444061(SRX128909)
Sample 19cDNABarcode: AF-PP-341: ACG CTC TTC . (skin)
TAX577580(Rovira)
total RNA. (breast)
SRR207110(GSM721072)
Nuclear RNA. (cell line)
SRR330900(SRX091738)
tissue: skin psoriatic uninvolveddisease stat. (skin)
SRR330913(SRX091751)
tissue: normal skindisease state: normal. (skin)
SRR094130(GSM651906)
small RNA(18-35nt)small RNA deep sequencing o. (uterus)
SRR330892(SRX091730)
tissue: skin psoriatic uninvolveddisease stat. (skin)
SRR330917(SRX091755)
tissue: normal skindisease state: normal. (skin)
SRR330871(SRX091709)
tissue: skin psoriatic involveddisease state:. (skin)
SRR330899(SRX091737)
tissue: skin psoriatic uninvolveddisease stat. (skin)
SRR330861(SRX091699)
tissue: skin psoriatic involveddisease state:. (skin)
SRR330878(SRX091716)
tissue: skin psoriatic involveddisease state:. (skin)
SRR330920(SRX091758)
tissue: normal skindisease state: normal. (skin)
SRR330895(SRX091733)
tissue: skin psoriatic uninvolveddisease stat. (skin)
SRR039624(GSM531987)
HBV(-) HCV(-) Adjacent Tissue Sample. (liver)
SRR330867(SRX091705)
tissue: skin psoriatic involveddisease state:. (skin)
SRR094129(GSM651905)
small RNA(18-35nt)small RNA deep sequencing o. (uterus)
SRR330873(SRX091711)
tissue: skin psoriatic involveddisease state:. (skin)
SRR330879(SRX091717)
tissue: skin psoriatic involveddisease state:. (skin)
SRR033722(GSM497067)
KMS12 cell line (KMS12). (B cell)
SRR191633(GSM715743)
85genomic small RNA (size selected RNA from t. (breast)
SRR330882(SRX091720)
tissue: skin psoriatic uninvolveddisease stat. (skin)
SRR330923(SRX091761)
tissue: normal skindisease state: normal. (skin)
SRR330875(SRX091713)
tissue: skin psoriatic involveddisease state:. (skin)
TAX577590(Rovira)
total RNA. (breast)
SRR191439(GSM715549)
176genomic small RNA (size selected RNA from . (breast)
TAX577579(Rovira)
total RNA. (breast)
SRR330902(SRX091740)
tissue: skin psoriatic uninvolveddisease stat. (skin)
TAX577743(Rovira)
total RNA. (breast)
SRR330881(SRX091719)
tissue: skin psoriatic uninvolveddisease stat. (skin)
SRR191592(GSM715702)
59genomic small RNA (size selected RNA from t. (breast)
SRR444049(SRX128897)
Sample 9cDNABarcode: AF-PP-334: ACG CTC TTC C. (skin)
SRR330911(SRX091749)
tissue: normal skindisease state: normal. (skin)
SRR330897(SRX091735)
tissue: skin psoriatic uninvolveddisease stat. (skin)
SRR207116(GSM721078)
Nuclear RNA. (cell line)
SRR330876(SRX091714)
tissue: skin psoriatic involveddisease state:. (skin)
.........................................................................................................................................................................................................GCAATTCAAGCTGCTGTT............................... 183.000.00-----------------2.00-------------------------------1.00----------------------------------------------------------------------------
......................................................................AAAAAGATTAATGATGTTTG................................................................................................................................................................ 201.000.00----------------------------------------------------------------1.00-------------------------------------------------------------