ID: uc002ktw.2_intron_6_0_chr18_20562357_f.5p
GENE: (7)
chr18:20562307-20562556+


(3)
B-CELL
(6)
BREAST
(25)
CELL-LINE
(3)
CERVIX
(3)
FIBROBLAST
(8)
HEART
(1)
KIDNEY
(2)
LIVER
(3)
OTHER
(2)
RRP40.ip
(67)
SKIN
(1)
TESTES
(1)
UTERUS
(1)
XRN.ip

Sense strand
ATACATAGAACAAACACATACTAAATTGGAGCACTCTGTGTGTGCAAATGGTAAGAGTTGGAGTTGTATTTTAGTTCTCTGGTTTTGTAAACCAGTGTTCATCTACTAGTTTTTATGTTATTCAATCTAGTGATAAGAAGATAGTCACTATTCTGGTATCCCATGGTACAACTATGAGTTTAACTTCTATTTGTAAAGTGACTGAGAAGGCGTTTTCTGCCCGTGTTATGTATAGATACGTGTCATCTAT
..............................................................................((((((.....))))))........((((((......((.....))...(((((((.........)))))))..))))))...(((..(((((.((.(((.....))).)).)))))..)))..................................................
.........................................................................74............................................................................................................................200................................................
SizePerfect hitTotal NormPerfect NormSRR330859(SRX091697)
tissue: skin psoriatic involveddisease state:. (skin)
SRR330861(SRX091699)
tissue: skin psoriatic involveddisease state:. (skin)
SRR330878(SRX091716)
tissue: skin psoriatic involveddisease state:. (skin)
DRR000558(DRX000316)
"THP-1 whole cell RNA, after 3 day treatment . (cell line)
SRR342896(SRX096792)
small RNA seq of Right atrial tissue. (heart)
DRR000555(DRX000313)
"THP-1 whole cell RNA, no treatment". (cell line)
SRR342898(SRX096794)
small RNA seq of Right atrial tissue. (heart)
SRR330921(SRX091759)
tissue: normal skindisease state: normal. (skin)
SRR330908(SRX091746)
tissue: normal skindisease state: normal. (skin)
SRR330895(SRX091733)
tissue: skin psoriatic uninvolveddisease stat. (skin)
SRR330860(SRX091698)
tissue: skin psoriatic involveddisease state:. (skin)
SRR330912(SRX091750)
tissue: normal skindisease state: normal. (skin)
DRR000557(DRX000315)
"THP-1 whole cell RNA, after 3 day treatment . (cell line)
SRR330905(SRX091743)
tissue: normal skindisease state: normal. (skin)
SRR094129(GSM651905)
small RNA(18-35nt)small RNA deep sequencing o. (uterus)
SRR330877(SRX091715)
tissue: skin psoriatic involveddisease state:. (skin)
SRR330862(SRX091700)
tissue: skin psoriatic involveddisease state:. (skin)
SRR330922(SRX091760)
tissue: normal skindisease state: normal. (skin)
SRR342897(SRX096793)
small RNA seq of Left atrial tissue. (heart)
SRR330873(SRX091711)
tissue: skin psoriatic involveddisease state:. (skin)
SRR330879(SRX091717)
tissue: skin psoriatic involveddisease state:. (skin)
SRR330868(SRX091706)
tissue: skin psoriatic involveddisease state:. (skin)
SRR330913(SRX091751)
tissue: normal skindisease state: normal. (skin)
SRR330883(SRX091721)
tissue: skin psoriatic uninvolveddisease stat. (skin)
SRR330896(SRX091734)
tissue: skin psoriatic uninvolveddisease stat. (skin)
DRR000559(DRX000317)
"THP-1 whole cell RNA, no treatment". (cell line)
SRR189784SRR342894(SRX096790)
small RNA seq of Right atrial tissue. (heart)
DRR000556(DRX000314)
"THP-1 whole cell RNA, after 3 day treatment . (cell line)
SRR330903(SRX091741)
tissue: skin psoriatic uninvolveddisease stat. (skin)
SRR037943(GSM510481)
293DcrTN. (cell line)
SRR189779(GSM714639)
cell line: HEK293clip variant: PAR-CLIPenzyma. (cell line)
SRR343335SRR039623(GSM531986)
HCV(+) HCC Tissue Sample. (liver)
SRR342899(SRX096795)
small RNA seq of Left atrial tissue. (heart)
SRR330915(SRX091753)
tissue: normal skindisease state: normal. (skin)
SRR037937(GSM510475)
293cand2. (cell line)
SRR330872(SRX091710)
tissue: skin psoriatic involveddisease state:. (skin)
SRR444067(SRX128915)
Sample 24cDNABarcode: AF-PP-340: ACG CTC TTC . (cell line)
SRR330900(SRX091738)
tissue: skin psoriatic uninvolveddisease stat. (skin)
SRR330890(SRX091728)
tissue: skin psoriatic uninvolveddisease stat. (skin)
SRR330885(SRX091723)
tissue: skin psoriatic uninvolveddisease stat. (skin)
SRR330904(SRX091742)
tissue: normal skindisease state: normal. (skin)
SRR330887(SRX091725)
tissue: skin psoriatic uninvolveddisease stat. (skin)
SRR330858(SRX091696)
tissue: skin psoriatic involveddisease state:. (skin)
SRR330889(SRX091727)
tissue: skin psoriatic uninvolveddisease stat. (skin)
SRR330897(SRX091735)
tissue: skin psoriatic uninvolveddisease stat. (skin)
SRR342895(SRX096791)
small RNA seq of Left atrial tissue. (heart)
SRR326280(GSM769510)
total cell content of unperturbed cells was s. (cell line)
SRR363673(GSM830250)
cell type: human foreskin fibroblasts (HFF)tr. (fibroblast)
SRR330914(SRX091752)
tissue: normal skindisease state: normal. (skin)
SRR330902(SRX091740)
tissue: skin psoriatic uninvolveddisease stat. (skin)
SRR330916(SRX091754)
tissue: normal skindisease state: normal. (skin)
SRR191398(GSM715508)
35genomic small RNA (size selected RNA from t. (breast)
SRR330880(SRX091718)
tissue: skin psoriatic involveddisease state:. (skin)
SRR039625(GSM531988)
HBV(-) HCV(-) HCC Tissue Sample. (liver)
SRR330882(SRX091720)
tissue: skin psoriatic uninvolveddisease stat. (skin)
SRR040028(GSM532913)
G026N. (cervix)
SRR330864(SRX091702)
tissue: skin psoriatic involveddisease state:. (skin)
GSM532874(GSM532874)
G699T. (cervix)
SRR207118(GSM721080)
RRP40 knockdown. (RRP40 cell line)
SRR189785SRR039192(GSM494811)
K562 cell line is derived from a CML patient . (cell line)
SRR330917(SRX091755)
tissue: normal skindisease state: normal. (skin)
SRR040025(GSM532910)
G613T. (cervix)
SRR189780(GSM714640)
cell line: HEK293clip variant: PAR-CLIPenzyma. (cell line)
TAX577742(Rovira)
total RNA. (breast)
SRR015448(SRR015448)
cytoplasmic small RNAs. (breast)
SRR207115(GSM721077)
XRN1&2 knockdown. (XRN1/XRN2 cell line)
SRR342900(SRX096796)
small RNA seq of Right atrial tissue. (heart)
SRR038857(GSM458540)
D20. (cell line)
SRR029131(GSM416760)
MCF7. (cell line)
SRR038862(GSM458545)
MM472. (cell line)
SRR191579(GSM715689)
102genomic small RNA (size selected RNA from . (breast)
SRR330866(SRX091704)
tissue: skin psoriatic involveddisease state:. (skin)
SRR189778(GSM714638)
cell line: HEK293clip variant: PAR-CLIPenzyma. (cell line)
SRR363674(GSM830251)
cell type: human foreskin fibroblasts (HFF)tr. (fibroblast)
SRR330874(SRX091712)
tissue: skin psoriatic involveddisease state:. (skin)
SRR444068(SRX128916)
Sample 25cDNABarcode: AF-PP-341: ACG CTC TTC . (cell line)
SRR444052(SRX128900)
Sample 12cDNABarcode: AF-PP-340: ACG CTC TTC . (skin)
SRR330867(SRX091705)
tissue: skin psoriatic involveddisease state:. (skin)
SRR330907(SRX091745)
tissue: normal skindisease state: normal. (skin)
SRR330899(SRX091737)
tissue: skin psoriatic uninvolveddisease stat. (skin)
SRR330894(SRX091732)
tissue: skin psoriatic uninvolveddisease stat. (skin)
SRR444040(SRX128888)
Sample 1cDNABarcode: AF-PP-333: ACG CTC TTC C. (skin)
SRR330892(SRX091730)
tissue: skin psoriatic uninvolveddisease stat. (skin)
SRR330869(SRX091707)
tissue: skin psoriatic involveddisease state:. (skin)
SRR444044(SRX128892)
Sample 5cDNABarcode: AF-PP-340: ACG CTC TTC C. (skin)
SRR330865(SRX091703)
tissue: skin psoriatic involveddisease state:. (skin)
SRR330906(SRX091744)
tissue: normal skindisease state: normal. (skin)
SRR553575(SRX182781)
source: Kidney. (Kidney)
SRR207111(GSM721073)
Whole cell RNA. (cell line)
SRR330910(SRX091748)
tissue: normal skindisease state: normal. (skin)
SRR342901(SRX096797)
small RNA seq of Left atrial tissue. (heart)
SRR326279(GSM769509)
cytoplasmic fraction was isolated using PARIS. (cell line)
SRR444049(SRX128897)
Sample 9cDNABarcode: AF-PP-334: ACG CTC TTC C. (skin)
SRR330923(SRX091761)
tissue: normal skindisease state: normal. (skin)
SRR330875(SRX091713)
tissue: skin psoriatic involveddisease state:. (skin)
SRR330884(SRX091722)
tissue: skin psoriatic uninvolveddisease stat. (skin)
SRR330919(SRX091757)
tissue: normal skindisease state: normal. (skin)
SRR330901(SRX091739)
tissue: skin psoriatic uninvolveddisease stat. (skin)
SRR191548(GSM715658)
101genomic small RNA (size selected RNA from . (breast)
SRR033713(GSM497058)
Burkitt Lymphoma (BL115). (B cell)
SRR553576(SRX182782)
source: Testis. (testes)
SRR330870(SRX091708)
tissue: skin psoriatic involveddisease state:. (skin)
SRR029132(GSM416761)
MB-MDA231. (cell line)
SRR330920(SRX091758)
tissue: normal skindisease state: normal. (skin)
SRR330876(SRX091714)
tissue: skin psoriatic involveddisease state:. (skin)
SRR444042(SRX128890)
Sample 3cDNABarcode: AF-PP-335: ACG CTC TTC C. (skin)
SRR330863(SRX091701)
tissue: skin psoriatic involveddisease state:. (skin)
SRR363675(GSM830252)
cell type: human foreskin fibroblasts (HFF)tr. (fibroblast)
TAX577739(Rovira)
total RNA. (breast)
SRR330871(SRX091709)
tissue: skin psoriatic involveddisease state:. (skin)
SRR444047(SRX128895)
Sample 27_1cDNABarcode: AF-PP-343: ACG CTC TT. (skin)
SRR326282(GSM769512)
"Dicer mRNA was knocked down using siDicer, t. (cell line)
SRR330893(SRX091731)
tissue: skin psoriatic uninvolveddisease stat. (skin)
SRR033718(GSM497063)
Multiple Myeloma (U266). (B cell)
SRR033722(GSM497067)
KMS12 cell line (KMS12). (B cell)
SRR207112(GSM721074)
RRP40 knockdown. (RRP40 cell line)
SRR444045(SRX128893)
Sample 6cDNABarcode: AF-PP-341: ACG CTC TTC C. (skin)
SRR444056(SRX128904)
Sample 28cDNABarcode: AF-PP-333: ACG CTC TTC . (skin)
SRR444062(SRX128910)
Sample 27_3cDNABarcode: AF-PP-343: ACG CTC TT. (skin)
SRR189781(GSM714641)
cell line: HEK293clip variant: PAR-CLIPenzyma. (cell line)
..............................................................................CTGGTTTTGTAAACCAGGG.........................................................................................................................................................19293.505.508.006.005.00-4.000.503.003.003.503.502.502.50-3.00-1.502.002.502.502.001.001.501.502.001.50--1.00-1.50----1.500.50-1.50-1.001.501.501.001.001.501.001.001.00--1.00-1.00-1.00-1.00-0.50----1.00-----0.50----1.00-----0.500.500.500.50-0.50---0.50------0.500.500.500.500.500.50--0.50-0.500.50---------------
..............................................................................CTGGTTTTGTAAACC.............................................................................................................................................................15623.8323.83-0.170.501.500.171.670.50-0.170.17-0.331.83--0.330.33----0.500.170.170.331.33-0.331.50-----0.33--0.171.33----0.50-0.170.330.330.171.000.170.170.17-----0.17----------0.17------0.670.330.830.83-----0.170.330.330.50-0.50--0.170.170.17-------0.17------0.33-0.330.33-----0.170.170.17-
...............................................................................TGGTTTTGTAAACCAG...........................................................................................................................................................1638.008.00---0.67-0.670.33--------0.33---0.330.330.33---0.33-0.33-------0.67------------0.67---------0.33------------------0.33--0.33-0.330.33---------0.330.33--------0.33----------0.33--------
..............................................................................CTGGTTTTGTAAACCA............................................................................................................................................................1647.007.00---1.00-0.50----0.75-0.75---------0.25--0.50--0.50---------0.25------0.25--0.500.25--------------------------0.250.25------0.75--0.25-----------------------------------
..............................................................................CTGGTTTTGTAAACCAG...........................................................................................................................................................1725.505.500.500.50-1.00-0.50------0.50----------------0.50---------0.50--0.50------------------------------------------------0.500.50------------------------------
...............................................................................TGGTTTTGTAAACCAGGGG........................................................................................................................................................1934.678.00-0.33-----0.33-------0.33--------0.33-----2.00--------------------------------------------------0.33----0.33----------------------0.33-----0.33-------
................................................................................GGTTTTGTAAACCAGGGGT.......................................................................................................................................................193.000.00---------------------------------1.00--------------------------1.00-----1.00--------------------------------------------------------
................................................................................GGTTTTGTAAACCAGGGG........................................................................................................................................................183.000.00--------------------1.00--------------------------------1.00-------------1.00-------------------------------------------------------
...............................................................................TGGTTTTGTAAACCAGGG.........................................................................................................................................................1833.008.000.33-0.67--------0.33----------0.33------------0.67---------------------------------0.33-------------------------0.33---------------------------
.................................................................................GTTTTGTAAACCAGTGGTC......................................................................................................................................................193.000.00--------------1.00--------------------------------------------------------1.001.00--------------------------------------------------
.........................TTGGAGCACTCTGTGTGTGCAAA..........................................................................................................................................................................................................2312.002.00---------------------------------------------------------1.00-1.00---------------------------------------------------------------
..............................................................................CTGGTTTTGTAAACCAGGGG........................................................................................................................................................2022.005.50-0.50-------------0.500.50----------------------------------------------------------------------------------------0.50-----------------
..ACATAGAACAAACACATACTAA..................................................................................................................................................................................................................................2212.002.00--------------------------2.00------------------------------------------------------------------------------------------------
..............................................................................CTGGTTTTGTAAACCAGAGA........................................................................................................................................................2021.505.50------------------------------------1.50--------------------------------------------------------------------------------------
...................................................................................................................................................................................................AAGTGACTGAGAAGGTAT.....................................181.000.00--------------------------------------------------------------1.00------------------------------------------------------------
......................AAATTGGAGCACTCTGTG..................................................................................................................................................................................................................1811.001.00----------------------------------------------------------------1.00----------------------------------------------------------
...............................................................................................................................................................................GAGTTTAACTTCTATATTC........................................................191.000.00--------------1.00------------------------------------------------------------------------------------------------------------
.......................................................................................................TACTAGTTTTTATGTTGT.................................................................................................................................181.000.00---------------------------------------------------------------------------1.00-----------------------------------------------
.................................................................................................................................................................................................TAAAGTGACTGAGAAGG........................................1711.001.00--1.00------------------------------------------------------------------------------------------------------------------------
..............................................AATGGTAAGAGTTGGAG...........................................................................................................................................................................................1711.001.00-------------------------------1.00-------------------------------------------------------------------------------------------
..................................................GTAAGAGTTGGAGTTGTAGAG...................................................................................................................................................................................211.000.00--------------------------------------------------------------------1.00------------------------------------------------------
...............................................................................TGGTTTTGTAAACCATGGG........................................................................................................................................................191.000.00--------------1.00------------------------------------------------------------------------------------------------------------
...............................................ATGGTAAGAGTTGGAG...........................................................................................................................................................................................1611.001.00-------------------------------1.00-------------------------------------------------------------------------------------------
.....................................................AGAGTTGGAGTTGTATCT...................................................................................................................................................................................181.000.00-------------------------------------------------------1.00-------------------------------------------------------------------
...........................GGAGCACTCTGTGTGTGCAAATG........................................................................................................................................................................................................2311.001.00-------------------------------------------------------------------------1.00-------------------------------------------------
..............................................................................CTGGTTTTGTAAACCAAA..........................................................................................................................................................1841.007.00------------------------------------------------------------------------------------------------------0.50-------------0.250.25-----
.................................................GGTAAGAGTTGGAGTTGTATTTTAGTT..............................................................................................................................................................................2711.001.00-----------------------------------------------------------------1.00---------------------------------------------------------
...............................................................................................................................TAGTGATAAGAAGATAGTCA.......................................................................................................2011.001.00---------------------------------------------------1.00-----------------------------------------------------------------------
................................................................................GGTTTTGTAAACCAGAGGT.......................................................................................................................................................191.000.00---------------------------------1.00-----------------------------------------------------------------------------------------
...............................................................................TGGTTTTGTAAACCAGC..........................................................................................................................................................1730.338.00---------------------------0.33-----------------------------------------------------------------------------------------------
...............................................................................TGGTTTTGTAAACCAGGGGT.......................................................................................................................................................2030.338.00------------------------------------------------------------------------------------------------------------0.33--------------
...............................................................................TGGTTTTGTAAACCAGGGT........................................................................................................................................................1930.338.00-------0.33-------------------------------------------------------------------------------------------------------------------
...............................................................................TGGTTTTGTAAACCAGGGTC.......................................................................................................................................................2030.338.00---------------------------------------------------------------------------------------------------------------0.33-----------
..............................................................................CTGGTTTTGTAAACCACAGA........................................................................................................................................................2040.257.00------------------------------------0.25--------------------------------------------------------------------------------------
..............................................................................CTGGTTTTGTAAACCAT...........................................................................................................................................................1740.257.00----------------------------------------------------------------------------------------------------------------------0.25----

Antisense strand
ATACATAGAACAAACACATACTAAATTGGAGCACTCTGTGTGTGCAAATGGTAAGAGTTGGAGTTGTATTTTAGTTCTCTGGTTTTGTAAACCAGTGTTCATCTACTAGTTTTTATGTTATTCAATCTAGTGATAAGAAGATAGTCACTATTCTGGTATCCCATGGTACAACTATGAGTTTAACTTCTATTTGTAAAGTGACTGAGAAGGCGTTTTCTGCCCGTGTTATGTATAGATACGTGTCATCTAT
..............................................................................((((((.....))))))........((((((......((.....))...(((((((.........)))))))..))))))...(((..(((((.((.(((.....))).)).)))))..)))..................................................
.........................................................................74............................................................................................................................200................................................
SizePerfect hitTotal NormPerfect NormSRR330859(SRX091697)
tissue: skin psoriatic involveddisease state:. (skin)
SRR330861(SRX091699)
tissue: skin psoriatic involveddisease state:. (skin)
SRR330878(SRX091716)
tissue: skin psoriatic involveddisease state:. (skin)
DRR000558(DRX000316)
"THP-1 whole cell RNA, after 3 day treatment . (cell line)
SRR342896(SRX096792)
small RNA seq of Right atrial tissue. (heart)
DRR000555(DRX000313)
"THP-1 whole cell RNA, no treatment". (cell line)
SRR342898(SRX096794)
small RNA seq of Right atrial tissue. (heart)
SRR330921(SRX091759)
tissue: normal skindisease state: normal. (skin)
SRR330908(SRX091746)
tissue: normal skindisease state: normal. (skin)
SRR330895(SRX091733)
tissue: skin psoriatic uninvolveddisease stat. (skin)
SRR330860(SRX091698)
tissue: skin psoriatic involveddisease state:. (skin)
SRR330912(SRX091750)
tissue: normal skindisease state: normal. (skin)
DRR000557(DRX000315)
"THP-1 whole cell RNA, after 3 day treatment . (cell line)
SRR330905(SRX091743)
tissue: normal skindisease state: normal. (skin)
SRR094129(GSM651905)
small RNA(18-35nt)small RNA deep sequencing o. (uterus)
SRR330877(SRX091715)
tissue: skin psoriatic involveddisease state:. (skin)
SRR330862(SRX091700)
tissue: skin psoriatic involveddisease state:. (skin)
SRR330922(SRX091760)
tissue: normal skindisease state: normal. (skin)
SRR342897(SRX096793)
small RNA seq of Left atrial tissue. (heart)
SRR330873(SRX091711)
tissue: skin psoriatic involveddisease state:. (skin)
SRR330879(SRX091717)
tissue: skin psoriatic involveddisease state:. (skin)
SRR330868(SRX091706)
tissue: skin psoriatic involveddisease state:. (skin)
SRR330913(SRX091751)
tissue: normal skindisease state: normal. (skin)
SRR330883(SRX091721)
tissue: skin psoriatic uninvolveddisease stat. (skin)
SRR330896(SRX091734)
tissue: skin psoriatic uninvolveddisease stat. (skin)
DRR000559(DRX000317)
"THP-1 whole cell RNA, no treatment". (cell line)
SRR189784SRR342894(SRX096790)
small RNA seq of Right atrial tissue. (heart)
DRR000556(DRX000314)
"THP-1 whole cell RNA, after 3 day treatment . (cell line)
SRR330903(SRX091741)
tissue: skin psoriatic uninvolveddisease stat. (skin)
SRR037943(GSM510481)
293DcrTN. (cell line)
SRR189779(GSM714639)
cell line: HEK293clip variant: PAR-CLIPenzyma. (cell line)
SRR343335SRR039623(GSM531986)
HCV(+) HCC Tissue Sample. (liver)
SRR342899(SRX096795)
small RNA seq of Left atrial tissue. (heart)
SRR330915(SRX091753)
tissue: normal skindisease state: normal. (skin)
SRR037937(GSM510475)
293cand2. (cell line)
SRR330872(SRX091710)
tissue: skin psoriatic involveddisease state:. (skin)
SRR444067(SRX128915)
Sample 24cDNABarcode: AF-PP-340: ACG CTC TTC . (cell line)
SRR330900(SRX091738)
tissue: skin psoriatic uninvolveddisease stat. (skin)
SRR330890(SRX091728)
tissue: skin psoriatic uninvolveddisease stat. (skin)
SRR330885(SRX091723)
tissue: skin psoriatic uninvolveddisease stat. (skin)
SRR330904(SRX091742)
tissue: normal skindisease state: normal. (skin)
SRR330887(SRX091725)
tissue: skin psoriatic uninvolveddisease stat. (skin)
SRR330858(SRX091696)
tissue: skin psoriatic involveddisease state:. (skin)
SRR330889(SRX091727)
tissue: skin psoriatic uninvolveddisease stat. (skin)
SRR330897(SRX091735)
tissue: skin psoriatic uninvolveddisease stat. (skin)
SRR342895(SRX096791)
small RNA seq of Left atrial tissue. (heart)
SRR326280(GSM769510)
total cell content of unperturbed cells was s. (cell line)
SRR363673(GSM830250)
cell type: human foreskin fibroblasts (HFF)tr. (fibroblast)
SRR330914(SRX091752)
tissue: normal skindisease state: normal. (skin)
SRR330902(SRX091740)
tissue: skin psoriatic uninvolveddisease stat. (skin)
SRR330916(SRX091754)
tissue: normal skindisease state: normal. (skin)
SRR191398(GSM715508)
35genomic small RNA (size selected RNA from t. (breast)
SRR330880(SRX091718)
tissue: skin psoriatic involveddisease state:. (skin)
SRR039625(GSM531988)
HBV(-) HCV(-) HCC Tissue Sample. (liver)
SRR330882(SRX091720)
tissue: skin psoriatic uninvolveddisease stat. (skin)
SRR040028(GSM532913)
G026N. (cervix)
SRR330864(SRX091702)
tissue: skin psoriatic involveddisease state:. (skin)
GSM532874(GSM532874)
G699T. (cervix)
SRR207118(GSM721080)
RRP40 knockdown. (RRP40 cell line)
SRR189785SRR039192(GSM494811)
K562 cell line is derived from a CML patient . (cell line)
SRR330917(SRX091755)
tissue: normal skindisease state: normal. (skin)
SRR040025(GSM532910)
G613T. (cervix)
SRR189780(GSM714640)
cell line: HEK293clip variant: PAR-CLIPenzyma. (cell line)
TAX577742(Rovira)
total RNA. (breast)
SRR015448(SRR015448)
cytoplasmic small RNAs. (breast)
SRR207115(GSM721077)
XRN1&2 knockdown. (XRN1/XRN2 cell line)
SRR342900(SRX096796)
small RNA seq of Right atrial tissue. (heart)
SRR038857(GSM458540)
D20. (cell line)
SRR029131(GSM416760)
MCF7. (cell line)
SRR038862(GSM458545)
MM472. (cell line)
SRR191579(GSM715689)
102genomic small RNA (size selected RNA from . (breast)
SRR330866(SRX091704)
tissue: skin psoriatic involveddisease state:. (skin)
SRR189778(GSM714638)
cell line: HEK293clip variant: PAR-CLIPenzyma. (cell line)
SRR363674(GSM830251)
cell type: human foreskin fibroblasts (HFF)tr. (fibroblast)
SRR330874(SRX091712)
tissue: skin psoriatic involveddisease state:. (skin)
SRR444068(SRX128916)
Sample 25cDNABarcode: AF-PP-341: ACG CTC TTC . (cell line)
SRR444052(SRX128900)
Sample 12cDNABarcode: AF-PP-340: ACG CTC TTC . (skin)
SRR330867(SRX091705)
tissue: skin psoriatic involveddisease state:. (skin)
SRR330907(SRX091745)
tissue: normal skindisease state: normal. (skin)
SRR330899(SRX091737)
tissue: skin psoriatic uninvolveddisease stat. (skin)
SRR330894(SRX091732)
tissue: skin psoriatic uninvolveddisease stat. (skin)
SRR444040(SRX128888)
Sample 1cDNABarcode: AF-PP-333: ACG CTC TTC C. (skin)
SRR330892(SRX091730)
tissue: skin psoriatic uninvolveddisease stat. (skin)
SRR330869(SRX091707)
tissue: skin psoriatic involveddisease state:. (skin)
SRR444044(SRX128892)
Sample 5cDNABarcode: AF-PP-340: ACG CTC TTC C. (skin)
SRR330865(SRX091703)
tissue: skin psoriatic involveddisease state:. (skin)
SRR330906(SRX091744)
tissue: normal skindisease state: normal. (skin)
SRR553575(SRX182781)
source: Kidney. (Kidney)
SRR207111(GSM721073)
Whole cell RNA. (cell line)
SRR330910(SRX091748)
tissue: normal skindisease state: normal. (skin)
SRR342901(SRX096797)
small RNA seq of Left atrial tissue. (heart)
SRR326279(GSM769509)
cytoplasmic fraction was isolated using PARIS. (cell line)
SRR444049(SRX128897)
Sample 9cDNABarcode: AF-PP-334: ACG CTC TTC C. (skin)
SRR330923(SRX091761)
tissue: normal skindisease state: normal. (skin)
SRR330875(SRX091713)
tissue: skin psoriatic involveddisease state:. (skin)
SRR330884(SRX091722)
tissue: skin psoriatic uninvolveddisease stat. (skin)
SRR330919(SRX091757)
tissue: normal skindisease state: normal. (skin)
SRR330901(SRX091739)
tissue: skin psoriatic uninvolveddisease stat. (skin)
SRR191548(GSM715658)
101genomic small RNA (size selected RNA from . (breast)
SRR033713(GSM497058)
Burkitt Lymphoma (BL115). (B cell)
SRR553576(SRX182782)
source: Testis. (testes)
SRR330870(SRX091708)
tissue: skin psoriatic involveddisease state:. (skin)
SRR029132(GSM416761)
MB-MDA231. (cell line)
SRR330920(SRX091758)
tissue: normal skindisease state: normal. (skin)
SRR330876(SRX091714)
tissue: skin psoriatic involveddisease state:. (skin)
SRR444042(SRX128890)
Sample 3cDNABarcode: AF-PP-335: ACG CTC TTC C. (skin)
SRR330863(SRX091701)
tissue: skin psoriatic involveddisease state:. (skin)
SRR363675(GSM830252)
cell type: human foreskin fibroblasts (HFF)tr. (fibroblast)
TAX577739(Rovira)
total RNA. (breast)
SRR330871(SRX091709)
tissue: skin psoriatic involveddisease state:. (skin)
SRR444047(SRX128895)
Sample 27_1cDNABarcode: AF-PP-343: ACG CTC TT. (skin)
SRR326282(GSM769512)
"Dicer mRNA was knocked down using siDicer, t. (cell line)
SRR330893(SRX091731)
tissue: skin psoriatic uninvolveddisease stat. (skin)
SRR033718(GSM497063)
Multiple Myeloma (U266). (B cell)
SRR033722(GSM497067)
KMS12 cell line (KMS12). (B cell)
SRR207112(GSM721074)
RRP40 knockdown. (RRP40 cell line)
SRR444045(SRX128893)
Sample 6cDNABarcode: AF-PP-341: ACG CTC TTC C. (skin)
SRR444056(SRX128904)
Sample 28cDNABarcode: AF-PP-333: ACG CTC TTC . (skin)
SRR444062(SRX128910)
Sample 27_3cDNABarcode: AF-PP-343: ACG CTC TT. (skin)
SRR189781(GSM714641)
cell line: HEK293clip variant: PAR-CLIPenzyma. (cell line)
........AACAAACACATACTAAGG................................................................................................................................................................................................................................ 181.000.00----------------------------------------------------------------------1.00----------------------------------------------------
.................................................................................................................................................................................................TAAAGTGACTGAGAAGGTAA..................................... 2011.000.00-------------------------------------------------------------1.00-------------------------------------------------------------
....................................TGTGTGTGCAAATGGTAACAG................................................................................................................................................................................................. 211.000.00--------------------------------1.00------------------------------------------------------------------------------------------
...................................................................................................................................................................................................................................ATGTATAGATACGTGTCC..... 181.000.00--------------------------------1.00------------------------------------------------------------------------------------------
.....................................ACCATTTGCACACAC...................................................................................................................................................................................................... 1580.120.12--------------------------------------------------------------------------------------------------------------------------0.12