ID: uc002kod.1_intron_17_0_chr18_9595101_r.5p
GENE: PPP4R1(2)
chr18:9614024-9614273-


(1)
AGO1.ip 		(3)
AGO2.ip 		(6)
B-CELL 		(2)
BRAIN 		(10)
BREAST 		(31)
CELL-LINE 		(10)
CERVIX 		(1)
FIBROBLAST 		(4)
HEART 		(3)
HELA 		(4)
LIVER 		(2)
OTHER 		(39)
SKIN 		(1)
UTERUS 		(1)
XRN.ip

Sense strand
CGCAGACCTCTCGCTGCTTCAGGAGGACCTGCAGGAGGACGCAGACGGATGTGAGTGGCCCGGCCTCGCGGTGGCCTGGCAGTCCGCGGGGAGCGGCCGGGGAGGGCGGGCGGCGGCGAGGCCTGGGCCGGGCCCTGGCTGGCTGAGGGGACGGTGGGCGAGGGCGGCCCCAGGCGGGCTGGGGTGGCGATCGGGGGGGAAAATCTCGCGTCCGTGAGGAAACGGCGCGCCCAGGTTCCGCTGGGGGAGG
............................................................................................((.((((....((.(((.(((.(((..(((....)))..)))))).))).)).......))))..))...........................................................................................
............................................................................................93...................................................................162......................................................................................
SizePerfect hitTotal NormPerfect NormSRR444049(SRX128897)
Sample 9cDNABarcode: AF-PP-334: ACG CTC TTC C. (skin)		SRR207110(GSM721072)
Nuclear RNA. (cell line)		SRR033727(GSM497072)
HIV-positive DL (HIV412). (B cell)		DRR001488(DRX001042)
"Hela short nuclear cell fraction, LNA(+)". (hela)		SRR039635(GSM518472)
THP1_nuc_sRNAs. (cell line)		SRR314796(SRX084354)
"Total RNA, fractionated (15-30nt)". (cell line)		SRR039619(GSM531982)
HBV(+) HCC Tissue Sample 1. (liver)		SRR342894(SRX096790)
small RNA seq of Right atrial tissue. (heart)		SRR330917(SRX091755)
tissue: normal skindisease state: normal. (skin)		RoviraIPAgo2(Rovira)
total RNA. (ago2 breast)		SRR033712(GSM497057)
Burkitt Lymphoma (BL510). (B cell)		SRR037942(GSM510480)
293DroshaTN_cand5. (cell line)		DRR000555(DRX000313)
"THP-1 whole cell RNA, no treatment". (cell line)		SRR553572(SRX182778)
source: Frontal Cortex. (Frontal Cortex)		SRR039190(GSM494809)
PBMCs were isolated by ficoll gradient from t. (blood)		SRR326279(GSM769509)
cytoplasmic fraction was isolated using PARIS. (cell line)		SRR040036(GSM532921)
G243N. (cervix)		TAX577740(Rovira)
total RNA. (breast)		SRR040025(GSM532910)
G613T. (cervix)		GSM450610(GSM450610)
miRNA sequencing raw reads from post-mortem s. (brain)		SRR330878(SRX091716)
tissue: skin psoriatic involveddisease state:. (skin)		SRR330916(SRX091754)
tissue: normal skindisease state: normal. (skin)		TAX577745(Rovira)
total RNA. (breast)		SRR330896(SRX091734)
tissue: skin psoriatic uninvolveddisease stat. (skin)		SRR330872(SRX091710)
tissue: skin psoriatic involveddisease state:. (skin)		SRR107297(GSM677704)
18-30nt fraction of small RNA. (cell line)		SRR330892(SRX091730)
tissue: skin psoriatic uninvolveddisease stat. (skin)		GSM339995(GSM339995)
hues6NP. (cell line)		SRR038854(GSM458537)
MM653. (cell line)		TAX577744(Rovira)
total RNA. (breast)		SRR330895(SRX091733)
tissue: skin psoriatic uninvolveddisease stat. (skin)		SRR330904(SRX091742)
tissue: normal skindisease state: normal. (skin)		TAX577589(Rovira)
total RNA. (breast)		DRR001489(DRX001043)
"Hela short nuclear cell fraction, control". (hela)		SRR107296(GSM677703)
18-30nt fraction of small RNA. (cell line)		GSM359208(GSM359208)
hepg2_bindASP_hl_2. (cell line)		SRR330867(SRX091705)
tissue: skin psoriatic involveddisease state:. (skin)		SRR330889(SRX091727)
tissue: skin psoriatic uninvolveddisease stat. (skin)		SRR040018(GSM532903)
G701N. (cervix)		SRR039621(GSM531984)
HBV(+) HCC Tissue Sample 2. (liver)		SRR330905(SRX091743)
tissue: normal skindisease state: normal. (skin)		GSM1105748AGO1(GSM1105748)
small RNA sequencing data. (ago1 hela)		SRR094129(GSM651905)
small RNA(18-35nt)small RNA deep sequencing o. (uterus)		SRR330879(SRX091717)
tissue: skin psoriatic involveddisease state:. (skin)		SRR039625(GSM531988)
HBV(-) HCV(-) HCC Tissue Sample. (liver)		SRR330913(SRX091751)
tissue: normal skindisease state: normal. (skin)		SRR330907(SRX091745)
tissue: normal skindisease state: normal. (skin)		GSM450601(GSM450601)
miRNA sequencing raw reads from post-mortem s. (brain)		SRR040011(GSM532896)
G529T. (cervix)		DRR000556(DRX000314)
"THP-1 whole cell RNA, after 3 day treatment . (cell line)		SRR060985(GSM569189)
Human naive B cell [09-001]. (cell line)		SRR330898(SRX091736)
tissue: skin psoriatic uninvolveddisease stat. (skin)		SRR342901(SRX096797)
small RNA seq of Left atrial tissue. (heart)		SRR330864(SRX091702)
tissue: skin psoriatic involveddisease state:. (skin)		GSM532874(GSM532874)
G699T. (cervix)		DRR000558(DRX000316)
"THP-1 whole cell RNA, after 3 day treatment . (cell line)		SRR037937(GSM510475)
293cand2. (cell line)		GSM956925PazD5(GSM956925)
"cell line: HEK293 cell linepassages: 15-20ip. (cell line)		SRR330897(SRX091735)
tissue: skin psoriatic uninvolveddisease stat. (skin)		SRR039192(GSM494811)
K562 cell line is derived from a CML patient . (cell line)		SRR060982(GSM569186)
Human centrocyte [09-001]. (cell line)		SRR033726(GSM497071)
Mututated CLL (CLLM633). (B cell)		SRR040007(GSM532892)
G601T. (cervix)		TAX577739(Rovira)
total RNA. (breast)		SRR040039(GSM532924)
G531T. (cervix)		GSM956925F181A(GSM956925)
"cell line: HEK293 cell linepassages: 15-20ip. (cell line)		SRR330871(SRX091709)
tissue: skin psoriatic involveddisease state:. (skin)		SRR040014(GSM532899)
G623N. (cervix)		SRR038859(GSM458542)
MM386. (cell line)		SRR330901(SRX091739)
tissue: skin psoriatic uninvolveddisease stat. (skin)		SRR330874(SRX091712)
tissue: skin psoriatic involveddisease state:. (skin)		SRR330868(SRX091706)
tissue: skin psoriatic involveddisease state:. (skin)		SRR038860(GSM458543)
MM426. (cell line)		SRR330877(SRX091715)
tissue: skin psoriatic involveddisease state:. (skin)		SRR039613(GSM531976)
Human Normal Liver Tissue Sample 3. (liver)		SRR060168(GSM565978)
5-8F_nucleus. (cell line)		SRR033730(GSM497075)
Lymphoblastic (ALL411). (B cell)		SRR033714(GSM497059)
Burkitt Lymphoma (BL134). (B cell)		SRR342895(SRX096791)
small RNA seq of Left atrial tissue. (heart)		SRR207116(GSM721078)
Nuclear RNA. (cell line)		SRR342898(SRX096794)
small RNA seq of Right atrial tissue. (heart)		SRR033723(GSM497068)
L1236 cell line (L1236). (B cell)		TAX577743(Rovira)
total RNA. (breast)		SRR191553(GSM715663)
96genomic small RNA (size selected RNA from t. (breast)		SRR189781(GSM714641)
cell line: HEK293clip variant: PAR-CLIPenzyma. (cell line)		SRR029125(GSM416754)
U2OS. (cell line)		SRR207115(GSM721077)
XRN1&2 knockdown. (XRN1/XRN2 cell line)		SRR444045(SRX128893)
Sample 6cDNABarcode: AF-PP-341: ACG CTC TTC C. (skin)		GSM956925Ago2PAZ(GSM956925)
"cell line: HEK293 cell linepassages: 15-20ip. (ago2 cell line)		SRR444061(SRX128909)
Sample 19cDNABarcode: AF-PP-341: ACG CTC TTC . (skin)		SRR330914(SRX091752)
tissue: normal skindisease state: normal. (skin)		SRR330881(SRX091719)
tissue: skin psoriatic uninvolveddisease stat. (skin)		SRR040028(GSM532913)
G026N. (cervix)		SRR191592(GSM715702)
59genomic small RNA (size selected RNA from t. (breast)		SRR330903(SRX091741)
tissue: skin psoriatic uninvolveddisease stat. (skin)		SRR330919(SRX091757)
tissue: normal skindisease state: normal. (skin)		SRR444060(SRX128908)
Sample 18cDNABarcode: AF-PP-340: ACG CTC TTC . (skin)		SRR038857(GSM458540)
D20. (cell line)		SRR330915(SRX091753)
tissue: normal skindisease state: normal. (skin)		SRR330920(SRX091758)
tissue: normal skindisease state: normal. (skin)		SRR363674(GSM830251)
cell type: human foreskin fibroblasts (HFF)tr. (fibroblast)		SRR330860(SRX091698)
tissue: skin psoriatic involveddisease state:. (skin)		SRR330883(SRX091721)
tissue: skin psoriatic uninvolveddisease stat. (skin)		SRR330906(SRX091744)
tissue: normal skindisease state: normal. (skin)		SRR444069(SRX128917)
Sample 26cDNABarcode: AF-PP-342: ACG CTC TTC . (skin)		SRR444058(SRX128906)
Sample 16cDNABarcode: AF-PP-335: ACG CTC TTC . (skin)		SRR444067(SRX128915)
Sample 24cDNABarcode: AF-PP-340: ACG CTC TTC . (cell line)		SRR040008(GSM532893)
G727N. (cervix)		GSM956925Ago2D5(GSM956925)
"cell line: HEK293 cell linepassages: 15-20ip. (ago2 cell line)		SRR326282(GSM769512)
"Dicer mRNA was knocked down using siDicer, t. (cell line)		SRR191582(GSM715692)
95genomic small RNA (size selected RNA from t. (breast)		SRR444055(SRX128903)
Sample 27_2cDNABarcode: AF-PP-343: ACG CTC TT. (skin)		SRR330884(SRX091722)
tissue: skin psoriatic uninvolveddisease stat. (skin)
.................................................................................................CGGGGAGGGCGGGCGGCG.......................................................................................................................................18210.5010.50--------0.50---------------0.50--0.500.500.50----0.50--------1.00--------------1.00---------------------------0.50--0.500.500.500.500.500.50-0.500.500.500.50-------------
..................................................................................................GGGGAGGGCGGGCGGT........................................................................................................................................1610.000.0010.00----------------------------------------------------------------------------------------------------------------
...................................AGGACGCAGACGGATGTG.....................................................................................................................................................................................................1814.004.00--2.00---------------------------------------1.00---------------------------------1.00------------------------------------
.......................AGGACCTGCAGGAGGACG.................................................................................................................................................................................................................1814.004.00--1.00------------------2.001.00------------------------------------------------------------------------------------------
...................CAGGAGGACCTGCAGGAGGA...................................................................................................................................................................................................................2013.003.00----------2.00-----------1.00------------------------------------------------------------------------------------------
......................GAGGACCTGCAGGAGGACGC................................................................................................................................................................................................................2013.003.00--2.00-----------1.00--------------------------------------------------------------------------------------------------
...................................................................................................................................GCCCTGGCTGGCTGAGGGGACGGATC.............................................................................................263.000.00-----3.00-----------------------------------------------------------------------------------------------------------
..................................................................................................GGGGAGGGCGGGCGGCG.......................................................................................................................................1732.672.67-------0.33---------------0.33-------0.33-------------------------------------------------------0.670.33------------0.33--0.33--------
....................AGGAGGACCTGCAGGAGGACGCAG..............................................................................................................................................................................................................2412.002.00--------------------------------------------1.00--------------1.00-----------------------------------------------------
.....................................................................................................................................................................................................................GTGAGGAAACGGCGCGCC...................1812.002.00------------------2.00----------------------------------------------------------------------------------------------
................................AGGAGGACGCAGACGGAT........................................................................................................................................................................................................1812.002.00----1.00-----------------------1.00------------------------------------------------------------------------------------
...............................CAGGAGGACGCAGACGGAT........................................................................................................................................................................................................1912.002.00----1.00------------------------------------------------------------------------1.00-----------------------------------
............................CTGCAGGAGGACGCAGACGGA.........................................................................................................................................................................................................2112.002.00------2.00----------------------------------------------------------------------------------------------------------
.................................................................................................CGGGGAGGGCGGGCGGCGG......................................................................................................................................1922.002.00-------------------------0.50-0.50--0.50---0.50------------------------------------------------------------------------------
......................................................................................CGGGGAGCGGCCGGGGGG..................................................................................................................................................181.000.00---------------------------------------------------------1.00-------------------------------------------------------
.................TTCAGGAGGACCTGCAGGAGGACGC................................................................................................................................................................................................................2511.001.00---------------------------------------------1.00-------------------------------------------------------------------
..........................................................................................................................................CTGGCTGAGGGGACGGTGGG............................................................................................2011.001.00--------------------------1.00--------------------------------------------------------------------------------------
...................CAGGAGGACCTGCAGGAGGACGC................................................................................................................................................................................................................2311.001.00--------------------1.00--------------------------------------------------------------------------------------------
.............................................................................................CGGCCGGGGAGGGCGGGCG..........................................................................................................................................1911.001.00-------------------1.00---------------------------------------------------------------------------------------------
......................GAGGACCTGCAGGAGGACGCA...............................................................................................................................................................................................................2111.001.00-----------------------------------------------1.00-----------------------------------------------------------------
....................................GGACGCAGACGGATGCG.....................................................................................................................................................................................................171.000.00-----------------1.00-----------------------------------------------------------------------------------------------
..................................................................................................GGGGAGGGCGGGCGGTC.......................................................................................................................................171.000.001.00----------------------------------------------------------------------------------------------------------------
......................GAGGACCTGCAGGAGGACG.................................................................................................................................................................................................................1911.001.00----------------------------------------------------------------------1.00------------------------------------------
............GCTGCTTCAGGAGGACCTGCA.........................................................................................................................................................................................................................2111.001.00--------------------1.00--------------------------------------------------------------------------------------------
..............................GCAGGAGGACGCAGACGG..........................................................................................................................................................................................................1811.001.00---------------------------------------1.00-------------------------------------------------------------------------
.................TTCAGGAGGACCTGCAGGAGGAC..................................................................................................................................................................................................................2311.001.00-----------------------------------------1.00-----------------------------------------------------------------------
..................................................................................................GGGGAGGGCGGGCGGAGA......................................................................................................................................181.000.00-----------------------1.00-----------------------------------------------------------------------------------------
..................................................................................................GGGGAGGGCGGGCGGAGCA.....................................................................................................................................191.000.00------------------------------------------------------1.00----------------------------------------------------------
..............TGCTTCAGGAGGACCTG...........................................................................................................................................................................................................................1711.001.00-------1.00---------------------------------------------------------------------------------------------------------
.....................................................................................................GAGGGCGGGCGGCGGCGGT..................................................................................................................................191.000.00-----------------------------1.00-----------------------------------------------------------------------------------
.......................AGGACCTGCAGGAGGACGC................................................................................................................................................................................................................1911.001.00-----------------------------------------------------------------------------------1.00-----------------------------
..........................................................................................................................................................................CAGGCGGGCTGGGGTGGCGATA..........................................................221.000.00-------------------------------1.00---------------------------------------------------------------------------------
..................................................................................................GGGGAGGGCGGGCGGCGG......................................................................................................................................1821.001.00--------0.50-------------------------------------------------------------------------------------------0.50------------
..................................GAGGACGCAGACGGATGT......................................................................................................................................................................................................1811.001.00-------------------------1.00---------------------------------------------------------------------------------------
.......................................................................................................................................TGGCTGGCTGAGGGGACGGTG..............................................................................................2111.001.00--------------------------------------------------1.00--------------------------------------------------------------
................................................................................................CCGGGGAGGGCGGGCGGCGGCA....................................................................................................................................221.000.00---------------1.00-------------------------------------------------------------------------------------------------
................................AGGAGGACGCAGACGGATC.......................................................................................................................................................................................................1911.002.00--------------1.00--------------------------------------------------------------------------------------------------
...............................CAGGAGGACGCAGACGGATG.......................................................................................................................................................................................................2011.001.00----1.00------------------------------------------------------------------------------------------------------------
.................................................................................................CGGGGAGGGCGGGCGGCT.......................................................................................................................................181.000.00-------------------------------------------------------------------1.00---------------------------------------------
.............CTGCTTCAGGAGGACCTGC..........................................................................................................................................................................................................................1911.001.00---------------------------------------------------1.00-------------------------------------------------------------
........................................................................GGCCTGGCAGTCCGCGGGGAGCGGG.........................................................................................................................................................251.000.00---------------1.00-------------------------------------------------------------------------------------------------
.................................................................................................CGGGGAGGGCGGGCGGCGGAA....................................................................................................................................2121.002.00--------1.00--------------------------------------------------------------------------------------------------------
............................................................................................................................................................GGCGAGGGCGGCCCCGGCC...........................................................................191.000.00----------------1.00------------------------------------------------------------------------------------------------
..............................GCAGGAGGACGCAGACGGATCC......................................................................................................................................................................................................221.000.00--------------------------------------------------------------------------1.00--------------------------------------
......................................................................................................................................................ACGGTGGGCGAGGGCCAG..................................................................................181.000.00----------------------------------------------------------------1.00------------------------------------------------
...............................CAGGAGGACGCAGACGGATGTG.....................................................................................................................................................................................................2211.001.00--------------------------------------------------------------------1.00--------------------------------------------
....................................GGACGCAGACGGATGTGAG...................................................................................................................................................................................................1911.001.00------------------------------------------------------------------------1.00----------------------------------------
.....................GGAGGACCTGCAGGAGGACGCAGACG...........................................................................................................................................................................................................2611.001.00-------------1.00---------------------------------------------------------------------------------------------------
...................CAGGAGGACCTGCAGGAGGACGCAGACGGATTTGG....................................................................................................................................................................................................351.000.00---------------------------------1.00-------------------------------------------------------------------------------
.......................................................................................................................................................................CCCCAGGCGGGCTGGTG..................................................................171.000.00------------------------------------------------------------------------------------1.00----------------------------
................................................................................................CCGGGGAGGGCGGGCGGCGGCGAGGC................................................................................................................................2611.001.00----------------------------------------------1.00------------------------------------------------------------------
.....................GGAGGACCTGCAGGAGGACGCAG..............................................................................................................................................................................................................2311.001.00------------------------------------------------------------1.00----------------------------------------------------
...................................................................................................GGGAGGGCGGGCGGCGGGGC...................................................................................................................................201.000.00-----------------------------------------------------------------1.00-----------------------------------------------
...................................................................................................................................................................................................GGGGAAAATCTCGCGCCC.....................................181.000.00---------1.00-------------------------------------------------------------------------------------------------------
................CTTCAGGAGGACCTGCAGGAGGACG.................................................................................................................................................................................................................2511.001.00---------------------------------------------------------------------------------1.00-------------------------------
..................................................................CGCGGTGGCCTGGCAG........................................................................................................................................................................1611.001.00------------------------------------------------------------------1.00----------------------------------------------
............................CTGCAGGAGGACGCAGACGGATGTG.....................................................................................................................................................................................................2511.001.00------1.00----------------------------------------------------------------------------------------------------------
................................AGGAGGACGCAGACGGTATT......................................................................................................................................................................................................201.000.00---------------------------------------------------------------------------1.00-------------------------------------
........................................................GGCCCGGCCTCGCGGCAT................................................................................................................................................................................181.000.00--------------------------------1.00--------------------------------------------------------------------------------
.....................GGAGGACCTGCAGGAGGACGCAGACGGATCC......................................................................................................................................................................................................311.000.00------------------------------------------------------------------------------1.00----------------------------------
........................................GCAGACGGATGTGAGTGG................................................................................................................................................................................................1811.001.00---------------------------------------------------------------1.00-------------------------------------------------
..................................GAGGACGCAGACGGATGTG.....................................................................................................................................................................................................1911.001.00----1.00------------------------------------------------------------------------------------------------------------
............................................................................................................GGCGGCGGCGAGGCCCAGC...........................................................................................................................191.000.00---------1.00-------------------------------------------------------------------------------------------------------
...................................................................................CCGCGGGGAGCGGCCGGGGAGGGC...............................................................................................................................................2411.001.00-----------------------------------1.00-----------------------------------------------------------------------------
.....................................GACGCAGACGGATGTGTGGT.................................................................................................................................................................................................201.000.00----------------------------------------------------------------------------------1.00------------------------------
..............TGCTTCAGGAGGACCTGCAGGAGGACGCAGACG...........................................................................................................................................................................................................3311.001.00-------------1.00---------------------------------------------------------------------------------------------------
...................................................................................................GGGAGGGCGGGCGGCGGCGGC..................................................................................................................................211.000.00-----------------------------------------------------1.00-----------------------------------------------------------
..................................GAGGACGCAGACGGATCCCT....................................................................................................................................................................................................201.000.00--------------------------------------------------------------------------------1.00--------------------------------
......................................................................................CGGGGAGCGGCCGGGGGC..................................................................................................................................................181.000.00------------------------------------------------1.00----------------------------------------------------------------
.........................................................................................................................................................................................GGCGATCGGGGGGGAAAATCTCTG.........................................241.000.00---------------------------------------------------------------------1.00-------------------------------------------
............................................................................................................................................................GGCGAGGGCGGCCCCGGC............................................................................181.000.00----------------1.00------------------------------------------------------------------------------------------------
.............CTGCTTCAGGAGGACC.............................................................................................................................................................................................................................1620.500.50--------------------------0.50--------------------------------------------------------------------------------------
....................AGGAGGACCTGCAGGAG.....................................................................................................................................................................................................................1760.500.50--------------------------------0.33-----------------------------------------------------------------------------0.17--
.........................................................................................................................................................................CCAGGCGGGCTGGGGTGG...............................................................1820.500.50---------------------------0.50-------------------------------------------------------------------------------------
..........................................................................................................CGGGCGGCGGCGAGGCCTG.............................................................................................................................1920.500.50-----------------------------------------------------------------------------------------------0.50-----------------
...................................................................................................GGGAGGGCGGGCGGCGGC.....................................................................................................................................1830.330.33------------------------------------------------------------------------------------------------------0.33----------
.....................GGAGGACCTGCAGGAGGA...................................................................................................................................................................................................................1830.330.33-------0.33---------------------------------------------------------------------------------------------------------
.................................................................................................CGGGGAGGGCGGGCGG.........................................................................................................................................1660.330.33---------------------------------------------------------------------------------------------------------0.17---0.17---
..................................................................................................GGGGAGGGCGGGCGGCA.......................................................................................................................................1790.220.11--------------------------------------------------------------------------------------0.22--------------------------
....................................................................................................GGAGGGCGGGCGGCGGC.....................................................................................................................................1750.200.20----------------------------------------------------------------------------------------0.20------------------------
................................................................................................CCGGGGAGGGCGGGCG..........................................................................................................................................1650.200.20---------------------------------0.20-------------------------------------------------------------------------------
........................................................................................................GGCGGGCGGCGGCGAGG.................................................................................................................................1760.170.17------------------------------------------------------------------------------------------------------------0.17----
.................................................................................................CGGGGAGGGCGGGCGGGGGA.....................................................................................................................................2060.170.33----------------------------------------------------------------------------------------------------------0.17------
.................................................................................................CGGGGAGGGCGGGCGGTA.......................................................................................................................................1860.170.33-----------------------------------------------------------------------------------------------------------0.17-----
........................................................................................GGGAGCGGCCGGGGA...................................................................................................................................................1570.140.14---------------------------------------------------------------------------------------------------------------0.14-
.................................................................................................................CGGCGAGGCCTGGGC..........................................................................................................................1580.120.12-----------------------0.12-----------------------------------------------------------------------------------------
...................................................................................................GGGAGGGCGGGCGGCG.......................................................................................................................................1680.120.12-----------------------------------------------------------------------------------------------------0.12-----------
...........................................................................................................................TGGGCCGGGCCCTGGC...............................................................................................................1680.120.12----------------------------------------------------------------------------------------------------------------0.12
..................................................................................................GGGGAGGGCGGGCGGC........................................................................................................................................1690.110.11--------0.11--------------------------------------------------------------------------------------------------------
..................................................................................................GGGGAGGGCGGGCGGCAG......................................................................................................................................1890.110.11----------------------------------0.11------------------------------------------------------------------------------

Antisense strand
CGCAGACCTCTCGCTGCTTCAGGAGGACCTGCAGGAGGACGCAGACGGATGTGAGTGGCCCGGCCTCGCGGTGGCCTGGCAGTCCGCGGGGAGCGGCCGGGGAGGGCGGGCGGCGGCGAGGCCTGGGCCGGGCCCTGGCTGGCTGAGGGGACGGTGGGCGAGGGCGGCCCCAGGCGGGCTGGGGTGGCGATCGGGGGGGAAAATCTCGCGTCCGTGAGGAAACGGCGCGCCCAGGTTCCGCTGGGGGAGG
............................................................................................((.((((....((.(((.(((.(((..(((....)))..)))))).))).)).......))))..))...........................................................................................
............................................................................................93...................................................................162......................................................................................
SizePerfect hitTotal NormPerfect NormSRR444049(SRX128897)
Sample 9cDNABarcode: AF-PP-334: ACG CTC TTC C. (skin)		SRR207110(GSM721072)
Nuclear RNA. (cell line)		SRR033727(GSM497072)
HIV-positive DL (HIV412). (B cell)		DRR001488(DRX001042)
"Hela short nuclear cell fraction, LNA(+)". (hela)		SRR039635(GSM518472)
THP1_nuc_sRNAs. (cell line)		SRR314796(SRX084354)
"Total RNA, fractionated (15-30nt)". (cell line)		SRR039619(GSM531982)
HBV(+) HCC Tissue Sample 1. (liver)		SRR342894(SRX096790)
small RNA seq of Right atrial tissue. (heart)		SRR330917(SRX091755)
tissue: normal skindisease state: normal. (skin)		RoviraIPAgo2(Rovira)
total RNA. (ago2 breast)		SRR033712(GSM497057)
Burkitt Lymphoma (BL510). (B cell)		SRR037942(GSM510480)
293DroshaTN_cand5. (cell line)		DRR000555(DRX000313)
"THP-1 whole cell RNA, no treatment". (cell line)		SRR553572(SRX182778)
source: Frontal Cortex. (Frontal Cortex)		SRR039190(GSM494809)
PBMCs were isolated by ficoll gradient from t. (blood)		SRR326279(GSM769509)
cytoplasmic fraction was isolated using PARIS. (cell line)		SRR040036(GSM532921)
G243N. (cervix)		TAX577740(Rovira)
total RNA. (breast)		SRR040025(GSM532910)
G613T. (cervix)		GSM450610(GSM450610)
miRNA sequencing raw reads from post-mortem s. (brain)		SRR330878(SRX091716)
tissue: skin psoriatic involveddisease state:. (skin)		SRR330916(SRX091754)
tissue: normal skindisease state: normal. (skin)		TAX577745(Rovira)
total RNA. (breast)		SRR330896(SRX091734)
tissue: skin psoriatic uninvolveddisease stat. (skin)		SRR330872(SRX091710)
tissue: skin psoriatic involveddisease state:. (skin)		SRR107297(GSM677704)
18-30nt fraction of small RNA. (cell line)		SRR330892(SRX091730)
tissue: skin psoriatic uninvolveddisease stat. (skin)		GSM339995(GSM339995)
hues6NP. (cell line)		SRR038854(GSM458537)
MM653. (cell line)		TAX577744(Rovira)
total RNA. (breast)		SRR330895(SRX091733)
tissue: skin psoriatic uninvolveddisease stat. (skin)		SRR330904(SRX091742)
tissue: normal skindisease state: normal. (skin)		TAX577589(Rovira)
total RNA. (breast)		DRR001489(DRX001043)
"Hela short nuclear cell fraction, control". (hela)		SRR107296(GSM677703)
18-30nt fraction of small RNA. (cell line)		GSM359208(GSM359208)
hepg2_bindASP_hl_2. (cell line)		SRR330867(SRX091705)
tissue: skin psoriatic involveddisease state:. (skin)		SRR330889(SRX091727)
tissue: skin psoriatic uninvolveddisease stat. (skin)		SRR040018(GSM532903)
G701N. (cervix)		SRR039621(GSM531984)
HBV(+) HCC Tissue Sample 2. (liver)		SRR330905(SRX091743)
tissue: normal skindisease state: normal. (skin)		GSM1105748AGO1(GSM1105748)
small RNA sequencing data. (ago1 hela)		SRR094129(GSM651905)
small RNA(18-35nt)small RNA deep sequencing o. (uterus)		SRR330879(SRX091717)
tissue: skin psoriatic involveddisease state:. (skin)		SRR039625(GSM531988)
HBV(-) HCV(-) HCC Tissue Sample. (liver)		SRR330913(SRX091751)
tissue: normal skindisease state: normal. (skin)		SRR330907(SRX091745)
tissue: normal skindisease state: normal. (skin)		GSM450601(GSM450601)
miRNA sequencing raw reads from post-mortem s. (brain)		SRR040011(GSM532896)
G529T. (cervix)		DRR000556(DRX000314)
"THP-1 whole cell RNA, after 3 day treatment . (cell line)		SRR060985(GSM569189)
Human naive B cell [09-001]. (cell line)		SRR330898(SRX091736)
tissue: skin psoriatic uninvolveddisease stat. (skin)		SRR342901(SRX096797)
small RNA seq of Left atrial tissue. (heart)		SRR330864(SRX091702)
tissue: skin psoriatic involveddisease state:. (skin)		GSM532874(GSM532874)
G699T. (cervix)		DRR000558(DRX000316)
"THP-1 whole cell RNA, after 3 day treatment . (cell line)		SRR037937(GSM510475)
293cand2. (cell line)		GSM956925PazD5(GSM956925)
"cell line: HEK293 cell linepassages: 15-20ip. (cell line)		SRR330897(SRX091735)
tissue: skin psoriatic uninvolveddisease stat. (skin)		SRR039192(GSM494811)
K562 cell line is derived from a CML patient . (cell line)		SRR060982(GSM569186)
Human centrocyte [09-001]. (cell line)		SRR033726(GSM497071)
Mututated CLL (CLLM633). (B cell)		SRR040007(GSM532892)
G601T. (cervix)		TAX577739(Rovira)
total RNA. (breast)		SRR040039(GSM532924)
G531T. (cervix)		GSM956925F181A(GSM956925)
"cell line: HEK293 cell linepassages: 15-20ip. (cell line)		SRR330871(SRX091709)
tissue: skin psoriatic involveddisease state:. (skin)		SRR040014(GSM532899)
G623N. (cervix)		SRR038859(GSM458542)
MM386. (cell line)		SRR330901(SRX091739)
tissue: skin psoriatic uninvolveddisease stat. (skin)		SRR330874(SRX091712)
tissue: skin psoriatic involveddisease state:. (skin)		SRR330868(SRX091706)
tissue: skin psoriatic involveddisease state:. (skin)		SRR038860(GSM458543)
MM426. (cell line)		SRR330877(SRX091715)
tissue: skin psoriatic involveddisease state:. (skin)		SRR039613(GSM531976)
Human Normal Liver Tissue Sample 3. (liver)		SRR060168(GSM565978)
5-8F_nucleus. (cell line)		SRR033730(GSM497075)
Lymphoblastic (ALL411). (B cell)		SRR033714(GSM497059)
Burkitt Lymphoma (BL134). (B cell)		SRR342895(SRX096791)
small RNA seq of Left atrial tissue. (heart)		SRR207116(GSM721078)
Nuclear RNA. (cell line)		SRR342898(SRX096794)
small RNA seq of Right atrial tissue. (heart)		SRR033723(GSM497068)
L1236 cell line (L1236). (B cell)		TAX577743(Rovira)
total RNA. (breast)		SRR191553(GSM715663)
96genomic small RNA (size selected RNA from t. (breast)		SRR189781(GSM714641)
cell line: HEK293clip variant: PAR-CLIPenzyma. (cell line)		SRR029125(GSM416754)
U2OS. (cell line)		SRR207115(GSM721077)
XRN1&2 knockdown. (XRN1/XRN2 cell line)		SRR444045(SRX128893)
Sample 6cDNABarcode: AF-PP-341: ACG CTC TTC C. (skin)		GSM956925Ago2PAZ(GSM956925)
"cell line: HEK293 cell linepassages: 15-20ip. (ago2 cell line)		SRR444061(SRX128909)
Sample 19cDNABarcode: AF-PP-341: ACG CTC TTC . (skin)		SRR330914(SRX091752)
tissue: normal skindisease state: normal. (skin)		SRR330881(SRX091719)
tissue: skin psoriatic uninvolveddisease stat. (skin)		SRR040028(GSM532913)
G026N. (cervix)		SRR191592(GSM715702)
59genomic small RNA (size selected RNA from t. (breast)		SRR330903(SRX091741)
tissue: skin psoriatic uninvolveddisease stat. (skin)		SRR330919(SRX091757)
tissue: normal skindisease state: normal. (skin)		SRR444060(SRX128908)
Sample 18cDNABarcode: AF-PP-340: ACG CTC TTC . (skin)		SRR038857(GSM458540)
D20. (cell line)		SRR330915(SRX091753)
tissue: normal skindisease state: normal. (skin)		SRR330920(SRX091758)
tissue: normal skindisease state: normal. (skin)		SRR363674(GSM830251)
cell type: human foreskin fibroblasts (HFF)tr. (fibroblast)		SRR330860(SRX091698)
tissue: skin psoriatic involveddisease state:. (skin)		SRR330883(SRX091721)
tissue: skin psoriatic uninvolveddisease stat. (skin)		SRR330906(SRX091744)
tissue: normal skindisease state: normal. (skin)		SRR444069(SRX128917)
Sample 26cDNABarcode: AF-PP-342: ACG CTC TTC . (skin)		SRR444058(SRX128906)
Sample 16cDNABarcode: AF-PP-335: ACG CTC TTC . (skin)		SRR444067(SRX128915)
Sample 24cDNABarcode: AF-PP-340: ACG CTC TTC . (cell line)		SRR040008(GSM532893)
G727N. (cervix)		GSM956925Ago2D5(GSM956925)
"cell line: HEK293 cell linepassages: 15-20ip. (ago2 cell line)		SRR326282(GSM769512)
"Dicer mRNA was knocked down using siDicer, t. (cell line)		SRR191582(GSM715692)
95genomic small RNA (size selected RNA from t. (breast)		SRR444055(SRX128903)
Sample 27_2cDNABarcode: AF-PP-343: ACG CTC TT. (skin)		SRR330884(SRX091722)
tissue: skin psoriatic uninvolveddisease stat. (skin)
.....CCTGAAGCAGCGAGAGGT................................................................................................................................................................................................................................... 1816.006.00-5.00------------------------------------------------------------1.00--------------------------------------------------
............................................................................................................................................................................................................GCCGTTTCCTCACGGACGCGAG........................ 2212.002.00-----------2.00-----------------------------------------------------------------------------------------------------
.TCCTCCTGAAGCAGCGAGAGGTCTGC............................................................................................................................................................................................................................... 2612.002.00---2.00-------------------------------------------------------------------------------------------------------------
........TCCTCCTGAAGCAGCGAGA............................................................................................................................................................................................................................... 1912.002.00-----------------------------------------------------------------------1.00-------------1.00---------------------------
.........................................................................CCCCGCGGACTGCCAGGC............................................................................................................................................................... 1812.002.00---1.00---------------------------------------------------1.00---------------------------------------------------------
.........................................................................CGCGGACTGCCAGGC.................................................................................................................................................................. 1511.001.00---1.00-------------------------------------------------------------------------------------------------------------
..CTGAAGCAGCGAGAGGTCTG.................................................................................................................................................................................................................................... 2011.001.00----------------------------------------------------1.00------------------------------------------------------------
.............................................................................................CGGCCGGGGAGGGCGGGGGG......................................................................................................................................... 201.000.00------------------------------------1.00----------------------------------------------------------------------------
.........................................................................................................................................................................................................................................GGTTCCGCTGGGGGAACCA 191.000.00--------------------------------------------------------1.00--------------------------------------------------------
.....CTGAAGCAGCGAGAGGT.................................................................................................................................................................................................................................... 1711.001.00-------------------------------------------------------------------------------1.00---------------------------------
............AGGTCCTCCTGAAGCAGC............................................................................................................................................................................................................................ 1811.001.00------------1.00----------------------------------------------------------------------------------------------------
.........TCCTCCTGAAGCAGCGAG............................................................................................................................................................................................................................... 1811.001.00-------------------------------------------------1.00---------------------------------------------------------------
......................................................................................................................................................................................................CACGGACGCGAGATTTTC.................................. 1811.001.00------------------------1.00----------------------------------------------------------------------------------------
................CTCCTGCAGGTCCTCCTGAAG..................................................................................................................................................................................................................... 2111.001.00------------1.00----------------------------------------------------------------------------------------------------
................................................................................................................................................................................................................................CAGCGGAACCTGGGCGCGC....... 1911.001.00-1.00---------------------------------------------------------------------------------------------------------------
....CTGAAGCAGCGAGAGGTC.................................................................................................................................................................................................................................... 1811.001.00--------------------------------------1.00--------------------------------------------------------------------------
.............................................GCCGGGCCACTCACATCCG.......................................................................................................................................................................................... 1911.001.00----------------------------------------1.00------------------------------------------------------------------------
....TCCTGAAGCAGCGAGAGGTC.................................................................................................................................................................................................................................. 2011.001.00-------------------------------------1.00---------------------------------------------------------------------------
.......................................................................................GGGGAGCGGCCGGGGACC................................................................................................................................................. 181.000.00-------------------------------------------------------------1.00---------------------------------------------------
.........................................................CCACCGCGAGGCCGGGC................................................................................................................................................................................ 1721.001.00-------0.50---------------0.50-----------------------------------------------------------------------------------------
.CCTGAAGCAGCGAGAGGTCTGC................................................................................................................................................................................................................................... 2211.001.00-------------------------------------------------------------------------1.00---------------------------------------
........................................................................................GGGAGCGGCCGGGGAGGAGGC............................................................................................................................................. 211.000.00------------------------------1.00----------------------------------------------------------------------------------
...........................................................................................................................................TGGCTGAGGGGACGGTTTA............................................................................................ 191.000.00-----------------1.00-----------------------------------------------------------------------------------------------
.......................................................................................GGGGAGCGGCCGGGGACAA................................................................................................................................................ 191.000.00-------------------1.00---------------------------------------------------------------------------------------------
...................................................................................................CGCCGCCGCCCGCCCTCCC.................................................................................................................................... 1930.330.33-------------------------------------------------------------------------------------------------------0.33---------