ID: uc002kob.2_intron_5_0_chr18_9525850_f.5p
GENE: (6)
chr18:9525800-9526049+


(3)
B-CELL 		(3)
BRAIN 		(2)
BREAST 		(16)
CELL-LINE 		(5)
CERVIX 		(4)
HEART 		(3)
LIVER 		(1)
OTHER 		(14)
SKIN 		(1)
UTERUS 		(1)
XRN.ip

Sense strand
AAAGAATTTTGACAGCCCTCAAAAGAAAACTGAGAGAAGCTAAAAGACAGGTGAGTTATTATTTTGATACCTAATGTTTATAATAGAATGTGTTTGAGTCTTTTATGTACTTTATGTACTCTTTTTTTTTCTTTCTTTCTTTTTTCTTTTGATGTTGACCAGGGTGGTCTCAAACTCTTGGCCTCAAGTAATCCTCCCACCTCGGCCTCCCCCAGAGTGCTGGGATTACAGACATGAGCCACCACCCCCA
.................................................................(((((.(((.((.(((((.(((...........))).))))).)).))).))).)).................................................................................................................................
..................................................51...........................................................................................144........................................................................................................
SizePerfect hitTotal NormPerfect NormSRR189780(GSM714640)
cell line: HEK293clip variant: PAR-CLIPenzyma. (cell line)		SRR189779(GSM714639)
cell line: HEK293clip variant: PAR-CLIPenzyma. (cell line)		SRR189778(GSM714638)
cell line: HEK293clip variant: PAR-CLIPenzyma. (cell line)		SRR189777(GSM714637)
cell line: HEK293clip variant: PAR-CLIPenzyma. (cell line)		SRR553572(SRX182778)
source: Frontal Cortex. (Frontal Cortex)		SRR189775(GSM714635)
cell line: HEK293clip variant: CLIPenzymatic . (cell line)		SRR189776(GSM714636)
cell line: HEK293clip variant: CLIPenzymatic . (cell line)		SRR387909(GSM843861)
specific-host: Homo sapienshost cell line: Su. (cell line)		SRR039622(GSM531985)
HCV(+) Adjacent Tissue Sample. (liver)		SRR033727(GSM497072)
HIV-positive DL (HIV412). (B cell)		SRR189781(GSM714641)
cell line: HEK293clip variant: PAR-CLIPenzyma. (cell line)		SRR189784SRR330890(SRX091728)
tissue: skin psoriatic uninvolveddisease stat. (skin)		SRR033721(GSM497066)
Ly3 cell line (Ly3). (B cell)		SRR189786SRR342899(SRX096795)
small RNA seq of Left atrial tissue. (heart)		SRR330874(SRX091712)
tissue: skin psoriatic involveddisease state:. (skin)		SRR330905(SRX091743)
tissue: normal skindisease state: normal. (skin)		SRR094130(GSM651906)
small RNA(18-35nt)small RNA deep sequencing o. (uterus)		SRR330906(SRX091744)
tissue: normal skindisease state: normal. (skin)		SRR189787DRR000557(DRX000315)
"THP-1 whole cell RNA, after 3 day treatment . (cell line)		DRR000556(DRX000314)
"THP-1 whole cell RNA, after 3 day treatment . (cell line)		GSM532874(GSM532874)
G699T. (cervix)		SRR060984(GSM569188)
Human plasma cell [09-001]. (cell line)		GSM956925PAZD5SRR189782SRR037937(GSM510475)
293cand2. (cell line)		TAX577741(Rovira)
total RNA. (breast)		GSM450610(GSM450610)
miRNA sequencing raw reads from post-mortem s. (brain)		SRR207115(GSM721077)
XRN1&2 knockdown. (XRN1/XRN2 cell line)		SRR107296(GSM677703)
18-30nt fraction of small RNA. (cell line)		GSM450602(GSM450602)
miRNA sequencing raw reads from post-mortem s. (brain)		SRR330869(SRX091707)
tissue: skin psoriatic involveddisease state:. (skin)		GSM450599(GSM450599)
miRNA sequencing raw reads from post-mortem s. (brain)		SRR015360(GSM380325)
Plasma B cells (PC137). (B cell)		SRR040043(GSM532928)
G428T. (cervix)		SRR342895(SRX096791)
small RNA seq of Left atrial tissue. (heart)		SRR039625(GSM531988)
HBV(-) HCV(-) HCC Tissue Sample. (liver)		SRR039620(GSM531983)
HBV(+) Adjacent Tissue Sample 2. (liver)		SRR342901(SRX096797)
small RNA seq of Left atrial tissue. (heart)		SRR015447(SRR015447)
nuclear small RNAs. (breast)		SRR040022(GSM532907)
G575N. (cervix)		SRR060168(GSM565978)
5-8F_nucleus. (cell line)		SRR330920(SRX091758)
tissue: normal skindisease state: normal. (skin)		SRR038852(GSM458535)
QF1160MB. (cell line)		SRR330887(SRX091725)
tissue: skin psoriatic uninvolveddisease stat. (skin)		SRR040025(GSM532910)
G613T. (cervix)		SRR330919(SRX091757)
tissue: normal skindisease state: normal. (skin)		SRR342900(SRX096796)
small RNA seq of Right atrial tissue. (heart)		SRR330902(SRX091740)
tissue: skin psoriatic uninvolveddisease stat. (skin)		SRR040020(GSM532905)
G699N_2. (cervix)		SRR330865(SRX091703)
tissue: skin psoriatic involveddisease state:. (skin)		SRR330880(SRX091718)
tissue: skin psoriatic involveddisease state:. (skin)		SRR330912(SRX091750)
tissue: normal skindisease state: normal. (skin)		SRR330867(SRX091705)
tissue: skin psoriatic involveddisease state:. (skin)		SRR330896(SRX091734)
tissue: skin psoriatic uninvolveddisease stat. (skin)
...................................................TGAGTTATTATTTTGTTTT....................................................................................................................................................................................197.000.00----6.00-------------------------------1.00--------------------
.....................AAAGAAAACTGAGAGAAGCTAA...............................................................................................................................................................................................................2215.005.00--------1.004.00-----------------------------------------------
...................................................TGAGTTATTATTTTGTGTG....................................................................................................................................................................................194.000.00----4.00----------------------------------------------------
.....................AAAGAAAACTGAGAGAAGC..................................................................................................................................................................................................................1924.004.00-------3.50-------0.50-----------------------------------------
.......................................................................................................................TCTTTTTTTTTCTTTCTTTCTTTTTTTG.......................................................................................................283.000.00--1.001.00-1.00---------------------------------------------------
.............................................................................................................................TTTTTCTTTCTTTCTTTTTTCACTG....................................................................................................253.000.00---1.00--2.00--------------------------------------------------
.......................................................................................................................TCTTTTTTTTTCTTTCTTAAAG.............................................................................................................223.000.00--1.002.00-----------------------------------------------------
...................................................TGAGTTATTATTTTGTAT.....................................................................................................................................................................................183.000.00----3.00----------------------------------------------------
.....................................................................................................................ACTCTTTTTTTTTCTTTCTTTTGAG............................................................................................................253.000.003.00--------------------------------------------------------
.......................................................................................................................TCTTTTTTTTTCTTTCTTTCTGG............................................................................................................232.000.002.00--------------------------------------------------------
.....................................................................................................................................TCTTTCTTTTTTCTTTTGTTTC...............................................................................................222.000.00-2.00-------------------------------------------------------
.........................................................................................................................TTTTTTTTTCTTTCTTTCTTTTTATG.......................................................................................................262.000.00-----1.001.00--------------------------------------------------
..................................................................................................................................CTTTCTTTCTTTTTTCTTGGCG..................................................................................................222.000.002.00--------------------------------------------------------
........................................................................................................................CTTTTTTTTTCTTTCTTTCTTTTAATG.......................................................................................................272.000.00--1.00---1.00--------------------------------------------------
...........................................................................................................................................TTTTTTCTTTTGATGTTTTAG..........................................................................................212.000.002.00--------------------------------------------------------
........................................................................................................................CTTTTTTTTTCTTTCTTTCTTCAG..........................................................................................................242.000.00--1.001.00-----------------------------------------------------
.....................................................................................................................ACTCTTTTTTTTTCTTTCTGAG...............................................................................................................222.000.002.00--------------------------------------------------------
...................................................TGAGTTATTATTTTGTATA....................................................................................................................................................................................192.000.00----2.00----------------------------------------------------
..........................................................................................................................TTTTTTTTCTTTCTTTCTTTTTTCG.......................................................................................................252.000.00--1.00-------1.00----------------------------------------------
....................AAAAGAAAACTGAGAGAAGCT.................................................................................................................................................................................................................2112.002.00---------------------1.00---------------1.00-------------------
..........................................................................................................................TTTTTTTTCTTTCTTTCTTTTTTCAAAG....................................................................................................282.000.00--2.00------------------------------------------------------
......................AAGAAAACTGAGAGAAGCT.................................................................................................................................................................................................................1932.002.00-------2.00-------------------------------------------------
..................................................................................................................TGTACTCTTTTTTTTTGTTC....................................................................................................................202.000.00--------------1.00-----1.00------------------------------------
...........................................................................................................................TTTTTTTCTTTCTTTCTTTGGGC........................................................................................................232.000.00-2.00-------------------------------------------------------
................................................................................................................................TTCTTTCTTTCTTTTTTCTTTTGCATG...............................................................................................272.000.00-2.00-------------------------------------------------------
.....................................................................................................................ACTCTTTTTTTTTCTTTCTTTTTGG............................................................................................................252.000.002.00--------------------------------------------------------
...............................................................................................................................TTTCTTTCTTTCTTTTTTCTTTTGGC.................................................................................................262.000.002.00--------------------------------------------------------
........................................................................................................................CTTTTTTTTTCTTTCTTTCTTTTTCCC.......................................................................................................272.000.00-2.00-------------------------------------------------------
.........................................................................................................................TTTTTTTTTCTTTCTTTCTTTTTTCG.......................................................................................................262.000.00--2.00------------------------------------------------------
...................................................TGAGTTATTATTTTGTTGT....................................................................................................................................................................................192.000.00----2.00----------------------------------------------------
...........................................................................................................................TTTTTTTCTTTCTTTCTTTTTTCTTTTTAG.................................................................................................302.000.00--1.001.00-----------------------------------------------------
...........................................................................................................................................TTTTTTCTTTTGATGCGG.............................................................................................182.000.00-2.00-------------------------------------------------------
............................................................................................................................................................................................................................TGGGATTACAGACATGATACA.........211.000.00----------------------------------1.00----------------------
.....................................................................................................................ACTCTTTTTTTTTCTTTCTTTTTG.............................................................................................................241.000.00---1.00-----------------------------------------------------
.....................................................................................................................................................................................................................AGAGTGCTGGGATTACAGAAACT..............231.000.00--------1.00------------------------------------------------
........................................................................................................................CTTTTTTTTTCTTTCTTTGTG.............................................................................................................211.000.00-----1.00---------------------------------------------------
........................................................................................................................CTTTTTTTTTCTTTCTTTCTTTTACCA.......................................................................................................271.000.00-1.00-------------------------------------------------------
.....................................................................................................................ACTCTTTTTTTTTCTTTCTTG................................................................................................................211.000.001.00--------------------------------------------------------
....................................................................................................................TACTCTTTTTTTTTCTTTCTTTTTT.............................................................................................................251.000.00-1.00-------------------------------------------------------
.........................................................................................................................TTTTTTTTTCTTTCTTTCTTTTTTCTTTTAG..................................................................................................311.000.00--1.00------------------------------------------------------
.....................................................................................................................ACTCTTTTTTTTTCTTTAAG.................................................................................................................201.000.00---1.00-----------------------------------------------------
........................................................................................................................CTTTTTTTTTCTTTCTTTCTCTCC..........................................................................................................241.000.001.00--------------------------------------------------------
...............................................................................................................................TTTCTTTCTTTCTTTTTTCGGTC....................................................................................................231.000.00-1.00-------------------------------------------------------
.............................................................................................................................TTTTTCTTTCTTTCTTTTTTCTTCTCC..................................................................................................271.000.00-1.00-------------------------------------------------------
....................................................................................................................TACTCTTTTTTTTTCTTTCTTTTTTT............................................................................................................261.000.00---1.00-----------------------------------------------------
................................................................................................................................TTCTTTCTTTCTTTTTTCGAT.....................................................................................................211.000.001.00--------------------------------------------------------
........................................................................................................................CTTTTTTTTTCTTTCTTTCTTTTTTCTATTG...................................................................................................311.000.00---1.00-----------------------------------------------------
.....................................................................................................................ACTCTTTTTTTTTCTTTCTTTTG..............................................................................................................231.000.001.00--------------------------------------------------------
..................................................................................................................................CTTTCTTTCTTTTTTCTTTTAATG................................................................................................241.000.00--1.00------------------------------------------------------
..............................................................................................................................TTTTCTTTCTTTCTTTTTTCGAG.....................................................................................................231.000.001.00--------------------------------------------------------
.......................................................................................................................TCTTTTTTTTTCTTTCTTTGGT.............................................................................................................221.000.00----------1.00----------------------------------------------
........................................................................................................................CTTTTTTTTTCTTTCTTTCTTTTTTTCAG.....................................................................................................291.000.00---1.00-----------------------------------------------------
.......................................................................................................................TCTTTTTTTTTCTTTCTTTCTTTTTTCTTTGG...................................................................................................321.000.00----------1.00----------------------------------------------
......................................................................................................................CTCTTTTTTTTTCTTTCTTTCTTTTTTTTG......................................................................................................301.000.00------1.00--------------------------------------------------
.....................................................................................................................ACTCTTTTTTTTTCTTTCTTTCTTTTAG.........................................................................................................281.000.001.00--------------------------------------------------------
.......................................................................................................................TCTTTTTTTTTCTTTCTTTCTTTTTCCT.......................................................................................................281.000.00-1.00-------------------------------------------------------
.......................................................................................................................TCTTTTTTTTTCTTTCGGAG...............................................................................................................201.000.001.00--------------------------------------------------------
..................................................................................................................................CTTTCTTTCTTTTTTCTTATTG..................................................................................................221.000.00---1.00-----------------------------------------------------
...............................................................................................................................TTTCTTTCTTTCTTTTTTCTTAAG...................................................................................................241.000.00--1.00------------------------------------------------------
.........................AAAACTGAGAGAAGCTAAAAGACATT.......................................................................................................................................................................................................261.000.00------------------------1.00--------------------------------
................................................................................................................................TTCTTTCTTTCTTTTTTCTTTTAAG.................................................................................................251.000.00---1.00-----------------------------------------------------
.....................................................................................................................ACTCTTTTTTTTTCTATTG..................................................................................................................191.000.00-----1.00---------------------------------------------------
.....................................................................................................................ACTCTTTTTTTTTCTTTGCAG................................................................................................................211.000.001.00--------------------------------------------------------
...................................................................................................................................TTTCTTTCTTTTTTCTTTTGGC.................................................................................................221.000.001.00--------------------------------------------------------
.........................................................................................................................TTTTTTTTTCTTTCTTTCTTTTTTATG......................................................................................................271.000.00---1.00-----------------------------------------------------
............................................................................................................ACTTTATGTACTCTTTTTTTTTCTTTCTTTCT..............................................................................................................3211.001.00----------------1.00----------------------------------------
.....................................................................................................................ACTCTTTTTTTTTCTTTCTTGTGA.............................................................................................................241.000.00-1.00-------------------------------------------------------
...................................................TGAGTTATTATTTTGAATAG...................................................................................................................................................................................201.000.00--------------------------1.00------------------------------
...................................................................................................................................TTTCTTTCTTTTTTCGGC.....................................................................................................181.000.001.00--------------------------------------------------------
.........................................................................................................................TTTTTTTTTCTTTCTTTCGGCG...........................................................................................................221.000.00-1.00-------------------------------------------------------
.........................................................................................................................TTTTTTTTTCTTTCTTTCTTTTTTCTTTCTAG.................................................................................................321.000.00---1.00-----------------------------------------------------
........................................................................................................................CTTTTTTTTTCTTTCTTTCTTTTTCAG.......................................................................................................271.000.00-----1.00---------------------------------------------------
........................................................................................................................CTTTTTTTTTCTTTCTTTCTTTTTTTCG......................................................................................................281.000.00---1.00-----------------------------------------------------
.......................................................................................................................TCTTTTTTTTTCTTTCTTTCTAATC..........................................................................................................251.000.001.00--------------------------------------------------------
............................................................................................................................TTTTTTCTTTCTTTCTTTTTTCAGC.....................................................................................................251.000.00-1.00-------------------------------------------------------
...................................................TGAGTTATTATTTTGTGT.....................................................................................................................................................................................181.000.00----1.00----------------------------------------------------
.......................AGAAAACTGAGAGAAGCTA................................................................................................................................................................................................................1921.001.00--------0.50------------------------------0.50-----------------
.................................................................................................................................TCTTTCTTTCTTTTTTCTTGCG...................................................................................................221.000.001.00--------------------------------------------------------
....................AAAAGAAAACTGAGAGAAGCTA................................................................................................................................................................................................................2211.001.00--------------------------------1.00------------------------
...........................................................................................................................TTTTTTTCTTTCTTTCTTTTTTCTCTG....................................................................................................271.000.00--1.00------------------------------------------------------
........................................................................................................................CTTTTTTTTTCTTTCTTTCTTTTAAG........................................................................................................261.000.001.00--------------------------------------------------------
......................................................................................................................CTCTTTTTTTTTCTTTCTTTTG..............................................................................................................221.000.00---1.00-----------------------------------------------------
........................................................................................................................CTTTTTTTTTCTTTCTTTCTTTGGC.........................................................................................................251.000.001.00--------------------------------------------------------
.......................................................................................................................TCTTTTTTTTTCTTTCTTTCTTTTTCAAG......................................................................................................291.000.00----------1.00----------------------------------------------
...........................................................................................................................TTTTTTTCTTTCTTTCTTTTTTCTTTTCG..................................................................................................291.000.00-----1.00---------------------------------------------------
.....................................................................................................................ACTCTTTTTTTTTCTTTCTTGG...............................................................................................................221.000.001.00--------------------------------------------------------
.........................................................................................................................TTTTTTTTTCTTTCTTTCTTTTTTCCG......................................................................................................271.000.00--1.00------------------------------------------------------
.........................................................................................................................TTTTTTTTTCTTTCTTTCTTTTTTCTTTAT...................................................................................................301.000.00---1.00-----------------------------------------------------
...........................................................................................................................TTTTTTTCTTTCTTTCTTTTTTCAGGG....................................................................................................271.000.001.00--------------------------------------------------------
...................................................................................................................................TTTCTTTCTTTTTTCTTTTGCA.................................................................................................221.000.00-1.00-------------------------------------------------------
....................................................................................................................TACTCTTTTTTTTTCTTTATT.................................................................................................................211.000.00------1.00--------------------------------------------------
.............................................................................................................................TTTTTCTTTCTTTCTTTTTTCTTTAAG..................................................................................................271.000.00---1.00-----------------------------------------------------
.......................................................................................................................................................................................................................AGTGCTGGGATTACAGACATGAGCCGGT.......281.000.00-----------------1.00---------------------------------------
...................CAAAAGAAAACTGAGAGAAGCTAAAAGACA.........................................................................................................................................................................................................3011.001.00-------------------1.00-------------------------------------
........................................................................................................................CTTTTTTTTTCTTTCTTTCGCAC...........................................................................................................231.000.001.00--------------------------------------------------------
........................................................................................................................CTTTTTTTTTCTTTCTTTCTTCAGG.........................................................................................................251.000.001.00--------------------------------------------------------
..........................................................................................................................TTTTTTTTCTTTCTTTCTTTTTTCAG......................................................................................................261.000.00---1.00-----------------------------------------------------
.............................................................................................................................TTTTTCTTTCTTTCTTTTTTCTTTTAG..................................................................................................271.000.001.00--------------------------------------------------------
............................................................................................................................TTTTTTCTTTCTTTCTTTTTACG.......................................................................................................231.000.00--1.00------------------------------------------------------
..........................AAACTGAGAGAAGCTAAAA.............................................................................................................................................................................................................1921.001.00------------------------------1.00--------------------------
...............................................................................................................................TTTCTTTCTTTCTTTTTTCATTG....................................................................................................231.000.00--1.00------------------------------------------------------
..............................................................................................................................................................................................ATCCTCCCACCTCGGCCTCTCGG.....................................231.000.00-1.00-------------------------------------------------------
....................................................................................................................TACTCTTTTTTTTTCTTTCG..................................................................................................................201.000.00--1.00------------------------------------------------------
....................................................................................................................TACTCTTTTTTTTTCTTTCTAA................................................................................................................221.000.00--1.00------------------------------------------------------
..AGAATTTTGACAGCCCAACT....................................................................................................................................................................................................................................201.000.00----------------------------1.00----------------------------
...........................................................................................................................TTTTTTTCTTTCTTTCTTTTTTCTTCTAG..................................................................................................291.000.00--1.00------------------------------------------------------
.......................................................................................................................TCTTTTTTTTTCTTTCTTTGGCG............................................................................................................231.000.00-1.00-------------------------------------------------------
...........................................................................................................................TTTTTTTCTTTCTTTCTTTTTTCTTTG....................................................................................................271.000.00---1.00-----------------------------------------------------
.........................................................................................................................TTTTTTTTTCTTTCTTTCTTTTTTCTCG.....................................................................................................281.000.00-----1.00---------------------------------------------------
.............................................................................................................................TTTTTCTTTCTTTCTTTTTTCTTTTCTTG................................................................................................291.000.00--1.00------------------------------------------------------
.......................................................................................................................TCTTTTTTTTTCTTTCTTTCTTTTTCG........................................................................................................271.000.00---1.00-----------------------------------------------------
..............................................................................................................................TTTTCTTTCTTTCTTTTTTCTTAATG..................................................................................................261.000.00---1.00-----------------------------------------------------
..................................................................................................................TGTACTCTTTTTTTTTCAGCC...................................................................................................................211.000.00-1.00-------------------------------------------------------
.........TGACAGCCCTCAAAAGC................................................................................................................................................................................................................................171.000.00-1.00-------------------------------------------------------
...................................................................................................................................TTTCTTTCTTTTTTCTTTGGC..................................................................................................211.000.001.00--------------------------------------------------------
.........................................................................................................................TTTTTTTTTCTTTCTTTCTTTTTTCTTTCC...................................................................................................301.000.001.00--------------------------------------------------------
.......................................................................................................................TCTTTTTTTTTCTTTCTTCACG.............................................................................................................221.000.00--1.00------------------------------------------------------
......................................................................................................................CTCTTTTTTTTTCTTTCTTTCTGG............................................................................................................241.000.001.00--------------------------------------------------------
....................................................................................................................TACTCTTTTTTTTTCTTTCTTTCTTTTAAG........................................................................................................301.000.00--1.00------------------------------------------------------
.....................AAAGAAAACTGAGAGAAGCTAAAAGACA.........................................................................................................................................................................................................2811.001.00---------------1.00-----------------------------------------
.............................................................................................................................TTTTTCTTTCTTTCTTTTTTCTTTAG...................................................................................................261.000.00-1.00-------------------------------------------------------
..............................................................................................................................TTTTCTTTCTTTCTTTTTTCGAGA....................................................................................................241.000.001.00--------------------------------------------------------
.....................................................................................................................ACTCTTTTTTTTTCTTTCTTTCTTTTTTTTAG.....................................................................................................321.000.00--1.00------------------------------------------------------
............................................................................................................................TTTTTTCTTTCTTTCTTTTTGCCC......................................................................................................241.000.001.00--------------------------------------------------------
..............................................................................................................................TTTTCTTTCTTTCTTTTTTCTTGG....................................................................................................241.000.001.00--------------------------------------------------------
.............................................................................................................................................................................................................................GGGATTACAGACATGAGCCACCAAAA...2601.001.00-------------------------------1.00-------------------------
........................................................................................................................CTTTTTTTTTCTTTCTTTCTTTTTCCAG......................................................................................................281.000.00--1.00------------------------------------------------------
........................................................................................................................CTTTTTTTTTCTTTCTTGTTG.............................................................................................................211.000.001.00--------------------------------------------------------
.......................AGAAAACTGAGAGAAGCTAAAAGATA.........................................................................................................................................................................................................261.000.00--------1.00------------------------------------------------
............................................................................................................................TTTTTTCTTTCTTTCTTTTTTCTTTTCTG.................................................................................................291.000.00--1.00------------------------------------------------------
.......................................................................................................................................TTTCTTTTTTCTTTTGGGTG...............................................................................................201.000.00-1.00-------------------------------------------------------
..AGAATTTTGACAGCCCTACAA...................................................................................................................................................................................................................................211.000.00------------1.00--------------------------------------------
.............................................................................................................................................................................................................................GGGATTACAGACATGAGCCACCA......2301.001.00-------------------------1.00-------------------------------
..............................................................................................................................................................................................ATCCTCCCACCTCGGCCTCCCTGGG...................................251.000.001.00--------------------------------------------------------
...................................................TGAGTTATTATTTTGTGC.....................................................................................................................................................................................181.000.00----1.00----------------------------------------------------
.....................................................................................................................ACTCTTTTTTTTTCTTTCTTTTCCT............................................................................................................251.000.00-1.00-------------------------------------------------------
.AAGAATTTTGACAGCCCTCAAA...................................................................................................................................................................................................................................2221.001.00---------------------------------1.00-----------------------
..................................................................................................................................CTTTCTTTCTTTTTTCTTTTACAG................................................................................................241.000.00---1.00-----------------------------------------------------
...................................................TGAGTTATTATTTTGTGTA....................................................................................................................................................................................191.000.00----1.00----------------------------------------------------
............................................................................................................................TTTTTTCTTTCTTTCTTTGGGC........................................................................................................221.000.00-1.00-------------------------------------------------------
.....................................................................................................................ACTCTTTTTTTTTCTTTACG.................................................................................................................201.000.001.00--------------------------------------------------------
...................................................TGAGTTATTATTTTGTTTG....................................................................................................................................................................................191.000.00----1.00----------------------------------------------------
..............................................................................................................................TTTTCTTTCTTTCTTTTTTCTTTTGGAG................................................................................................281.000.001.00--------------------------------------------------------
.....................................................................................................................................TCTTTCTTTTTTCTTTTGGAG................................................................................................211.000.001.00--------------------------------------------------------
......................................................................................................................CTCTTTTTTTTTCTTTCTTTTTTC............................................................................................................241.000.001.00--------------------------------------------------------
....................................................................................................................................TTCTTTCTTTTTTCTTGACG..................................................................................................201.000.001.00--------------------------------------------------------
.......................................................................................................................TCTTTTTTTTTCTTTCTTTCTTGGC..........................................................................................................251.000.001.00--------------------------------------------------------
......................................................................................................................CTCTTTTTTTTTCTTTCTTTCTTCAT..........................................................................................................261.000.001.00--------------------------------------------------------
...........................................................................................................................................................................................................................CTGGGATTACAGACATGATACA.........221.000.00----1.00----------------------------------------------------
......................................................................................................................CTCTTTTTTTTTCTTTCTTTCTTTTG..........................................................................................................261.000.00------1.00--------------------------------------------------
.....................................................................................................................................TCTTTCTTTTTTCTTTTGGTC................................................................................................211.000.001.00--------------------------------------------------------
...........................................................................................................................................TTTTTTCTTTTGATGTTGACCAGGGT.....................................................................................2611.001.00------------1.00--------------------------------------------
....................................................................................................................TACTCTTTTTTTTTCTTTCTTTCTTTTTTTTTG.....................................................................................................331.000.00------1.00--------------------------------------------------
.......................................................................................................................TCTTTTTTTTTCTTTCTTTCTTCCG..........................................................................................................251.000.00--1.00------------------------------------------------------
................................................................................................................................TTCTTTCTTTCTTTTTTCGCC.....................................................................................................211.000.001.00--------------------------------------------------------
...................................................TGAGTTATTATTTTGTATT....................................................................................................................................................................................191.000.00----1.00----------------------------------------------------
.......................................................................................................................TCTTTTTTTTTCTTTCTTTGGGA............................................................................................................231.000.00-1.00-------------------------------------------------------
.....................................................................................................................ACTCTTTTTTTTTCTTTCTTTGAG.............................................................................................................241.000.001.00--------------------------------------------------------
....................................................................................................................TACTCTTTTTTTTTCTTTCTTCTG..............................................................................................................241.000.001.00--------------------------------------------------------
........................................................................................................................CTTTTTTTTTCTTTCTTTCTAA............................................................................................................221.000.00---1.00-----------------------------------------------------
...................................................TGAGTTATTATTTTGTTCT....................................................................................................................................................................................191.000.00------------------1.00--------------------------------------
........................................................................................................................CTTTTTTTTTCTTTCTTTCTTTTGC.........................................................................................................251.000.001.00--------------------------------------------------------
..............................................................................................................................TTTTCTTTCTTTCTTTTTTCTCAG....................................................................................................241.000.00-----1.00---------------------------------------------------
.....................................................................................................................ACTCTTTTTTTTTCTTTCTGTTC..............................................................................................................231.000.001.00--------------------------------------------------------
.....................AAAGAAAACTGAGAGCCAA..................................................................................................................................................................................................................191.000.00-------------1.00-------------------------------------------
....................................................................................................................................................TTGATGTTGACCAGGGTGTTTG................................................................................221.000.00---------------------------1.00-----------------------------
.......................................................................................................................TCTTTTTTTTTCTTTCTTGG...............................................................................................................201.000.001.00--------------------------------------------------------
......................................................................................................................................CTTTCTTTTTTCTTTTGGCC................................................................................................201.000.001.00--------------------------------------------------------
....................................................................................................................TACTCTTTTTTTTTCTTTCTTTTG..............................................................................................................241.000.00-----1.00---------------------------------------------------
.....................................................................................................................ACTCTTTTTTTTTCTTTCTTTCTTTCTTG........................................................................................................291.000.00-----1.00---------------------------------------------------
.....................................................................................................................ACTCTTTTTTTTTCTTTCTGTA...............................................................................................................221.000.00-1.00-------------------------------------------------------
.............................................................................................................................TTTTTCTTTCTTTCTTTTTTCGG......................................................................................................231.000.00-1.00-------------------------------------------------------
....................................................................................................................TACTCTTTTTTTTTCTTTCTTTCTCTTT..........................................................................................................281.000.00---1.00-----------------------------------------------------
.............................................................................................................................TTTTTCTTTCTTTCTTTTTTCAGGC....................................................................................................251.000.001.00--------------------------------------------------------
......................AAGAAAACTGAGAGAAGC..................................................................................................................................................................................................................1840.750.75-----------------------------------------------0.250.250.25-------
............................................................................................................................TTTTTTCTTTCTTTCTTTTTTCTTTTG...................................................................................................2730.670.670.67--------------------------------------------------------
......................AAGAAAACTGAGAGAAGCTAAAAGACAG........................................................................................................................................................................................................2820.500.50-----------------------------------------0.50---------------
..................TCAAAAGAAAACTGAGAG......................................................................................................................................................................................................................1820.500.50------------------------------------------0.50--------------
.AAGAATTTTGACAGCCCTCAA....................................................................................................................................................................................................................................2120.500.50--------------------------------------------0.50------------
......................AAGAAAACTGAGAGAAGCTAAAAGACA.........................................................................................................................................................................................................2720.500.50----------------0.50----------------------------------------
.AAGAATTTTGACAGCCCTC......................................................................................................................................................................................................................................1920.500.50----------------------------------------0.50----------------
......................AAGAAAACTGAGAGAAGCTAAAAGAC..........................................................................................................................................................................................................2620.500.50--------------------------------------0.50------------------
......................AAGAAAACTGAGAGAAGCTA................................................................................................................................................................................................................2020.500.50---------------------------------------------0.50-----------
..........................AAACTGAGAGAAGCTAAAAGAC..........................................................................................................................................................................................................2220.500.50-------------------------------------------0.50-------------
.AAGAATTTTGACAGCCCTCA.....................................................................................................................................................................................................................................2020.500.50--------0.50------------------------------------------------
......................AAGAAAACTGAGAGAAG...................................................................................................................................................................................................................1780.380.38----------------------------------------------------0.120.120.12--
............................................................................................................................TTTTTTCTTTCTTTCTTTTTTCTTTTGGCC................................................................................................3030.330.670.33--------------------------------------------------------
..................TCAAAAGAAAACTGAGA.......................................................................................................................................................................................................................1770.290.29----------------------------------------------0.29----------
.....................AAAGAAAACTGAGAGAAG...................................................................................................................................................................................................................1860.170.17---------------------------------------------------0.17-----
..........................................................................................................................................................................................................CGGCCTCCCCCAGAGT................................1660.170.17--------------------------------------------------0.17------
........................................................................................................................CTTTTTTTTTCTTTCTTTCTTTTTTCCTG.....................................................................................................2970.140.14--0.14------------------------------------------------------
........................................................................................................................CTTTTTTTTTCTTTCTTTCTTTTTTCCTTG....................................................................................................3070.140.14---0.14-----------------------------------------------------
........................................................................................................................CTTTTTTTTTCTTTCTTTCTTTTTTCG.......................................................................................................2770.140.14--0.14------------------------------------------------------
........................................................................................................................CTTTTTTTTTCTTTCTTTCTTTTTTC........................................................................................................2670.140.14--0.14------------------------------------------------------
.............................................................................................................................TTTTTCTTTCTTTCTTTTTTCTTTTG...................................................................................................2670.140.14---0.14-----------------------------------------------------
........................................................................................................................CTTTTTTTTTCTTTCTTTCTTTTTTCAGC.....................................................................................................2970.140.140.14--------------------------------------------------------
..................................................................................................................................................................................TGGCCTCAAGTAATCCTCCCACCTCGGCC...........................................2990.110.11-------------------------------------------------------0.11-

Antisense strand
AAAGAATTTTGACAGCCCTCAAAAGAAAACTGAGAGAAGCTAAAAGACAGGTGAGTTATTATTTTGATACCTAATGTTTATAATAGAATGTGTTTGAGTCTTTTATGTACTTTATGTACTCTTTTTTTTTCTTTCTTTCTTTTTTCTTTTGATGTTGACCAGGGTGGTCTCAAACTCTTGGCCTCAAGTAATCCTCCCACCTCGGCCTCCCCCAGAGTGCTGGGATTACAGACATGAGCCACCACCCCCA
.................................................................(((((.(((.((.(((((.(((...........))).))))).)).))).))).)).................................................................................................................................
..................................................51...........................................................................................144........................................................................................................
SizePerfect hitTotal NormPerfect NormSRR189780(GSM714640)
cell line: HEK293clip variant: PAR-CLIPenzyma. (cell line)		SRR189779(GSM714639)
cell line: HEK293clip variant: PAR-CLIPenzyma. (cell line)		SRR189778(GSM714638)
cell line: HEK293clip variant: PAR-CLIPenzyma. (cell line)		SRR189777(GSM714637)
cell line: HEK293clip variant: PAR-CLIPenzyma. (cell line)		SRR553572(SRX182778)
source: Frontal Cortex. (Frontal Cortex)		SRR189775(GSM714635)
cell line: HEK293clip variant: CLIPenzymatic . (cell line)		SRR189776(GSM714636)
cell line: HEK293clip variant: CLIPenzymatic . (cell line)		SRR387909(GSM843861)
specific-host: Homo sapienshost cell line: Su. (cell line)		SRR039622(GSM531985)
HCV(+) Adjacent Tissue Sample. (liver)		SRR033727(GSM497072)
HIV-positive DL (HIV412). (B cell)		SRR189781(GSM714641)
cell line: HEK293clip variant: PAR-CLIPenzyma. (cell line)		SRR189784SRR330890(SRX091728)
tissue: skin psoriatic uninvolveddisease stat. (skin)		SRR033721(GSM497066)
Ly3 cell line (Ly3). (B cell)		SRR189786SRR342899(SRX096795)
small RNA seq of Left atrial tissue. (heart)		SRR330874(SRX091712)
tissue: skin psoriatic involveddisease state:. (skin)		SRR330905(SRX091743)
tissue: normal skindisease state: normal. (skin)		SRR094130(GSM651906)
small RNA(18-35nt)small RNA deep sequencing o. (uterus)		SRR330906(SRX091744)
tissue: normal skindisease state: normal. (skin)		SRR189787DRR000557(DRX000315)
"THP-1 whole cell RNA, after 3 day treatment . (cell line)		DRR000556(DRX000314)
"THP-1 whole cell RNA, after 3 day treatment . (cell line)		GSM532874(GSM532874)
G699T. (cervix)		SRR060984(GSM569188)
Human plasma cell [09-001]. (cell line)		GSM956925PAZD5SRR189782SRR037937(GSM510475)
293cand2. (cell line)		TAX577741(Rovira)
total RNA. (breast)		GSM450610(GSM450610)
miRNA sequencing raw reads from post-mortem s. (brain)		SRR207115(GSM721077)
XRN1&2 knockdown. (XRN1/XRN2 cell line)		SRR107296(GSM677703)
18-30nt fraction of small RNA. (cell line)		GSM450602(GSM450602)
miRNA sequencing raw reads from post-mortem s. (brain)		SRR330869(SRX091707)
tissue: skin psoriatic involveddisease state:. (skin)		GSM450599(GSM450599)
miRNA sequencing raw reads from post-mortem s. (brain)		SRR015360(GSM380325)
Plasma B cells (PC137). (B cell)		SRR040043(GSM532928)
G428T. (cervix)		SRR342895(SRX096791)
small RNA seq of Left atrial tissue. (heart)		SRR039625(GSM531988)
HBV(-) HCV(-) HCC Tissue Sample. (liver)		SRR039620(GSM531983)
HBV(+) Adjacent Tissue Sample 2. (liver)		SRR342901(SRX096797)
small RNA seq of Left atrial tissue. (heart)		SRR015447(SRR015447)
nuclear small RNAs. (breast)		SRR040022(GSM532907)
G575N. (cervix)		SRR060168(GSM565978)
5-8F_nucleus. (cell line)		SRR330920(SRX091758)
tissue: normal skindisease state: normal. (skin)		SRR038852(GSM458535)
QF1160MB. (cell line)		SRR330887(SRX091725)
tissue: skin psoriatic uninvolveddisease stat. (skin)		SRR040025(GSM532910)
G613T. (cervix)		SRR330919(SRX091757)
tissue: normal skindisease state: normal. (skin)		SRR342900(SRX096796)
small RNA seq of Right atrial tissue. (heart)		SRR330902(SRX091740)
tissue: skin psoriatic uninvolveddisease stat. (skin)		SRR040020(GSM532905)
G699N_2. (cervix)		SRR330865(SRX091703)
tissue: skin psoriatic involveddisease state:. (skin)		SRR330880(SRX091718)
tissue: skin psoriatic involveddisease state:. (skin)		SRR330912(SRX091750)
tissue: normal skindisease state: normal. (skin)		SRR330867(SRX091705)
tissue: skin psoriatic involveddisease state:. (skin)		SRR330896(SRX091734)
tissue: skin psoriatic uninvolveddisease stat. (skin)
..............................................................................................................................................................................................................CTCCCCCAGAGTGCTGGGATTACTG................... 251.000.001.00--------------------------------------------------------
..............................................................................................................................................................CCAGGGTGGTCTCAAAAC.......................................................................... 181.000.00----------------------1.00----------------------------------
...................................................................................................CTTTTATGTACTTTATGTTGCA................................................................................................................................. 221.000.00--------------1.00------------------------------------------
........................................................................................................................................................................................................................................CATGAGCCACCACCCCCAAAA 211.000.00-----------------------------------1.00---------------------
...............................................................................................................................................................CAGGGTGGTCTCAAACTCTTGGCAC.................................................................. 251.000.00-1.00-------------------------------------------------------
................................................................................................................................................................................................CCTCCCACCTCGGCCTGGC....................................... 191.000.00-----------------------------1.00---------------------------
....AATTTTGACAGCCCTCTTT................................................................................................................................................................................................................................... 191.000.00-------------1.00-------------------------------------------
...................CAAAAGAAAACTGAGAGCT.................................................................................................................................................................................................................... 191.000.00-----------1.00---------------------------------------------
........................................................................................................................................................TGTTGACCAGGGTGGTGAGC.............................................................................. 201.000.00-----------------------1.00---------------------------------
................................................................................................................................................................................................CCTCCCACCTCGGCCTCCCGCC.................................... 221.000.001.00--------------------------------------------------------
...........ACAGCCCTCAAAAGAAGGTG........................................................................................................................................................................................................................... 201.000.00-1.00-------------------------------------------------------
.....................................................................................................................................................................................................................AGAGTGCTGGGATTACAGATTC............... 221.000.00-----------1.00---------------------------------------------