ID: uc002kmy.3_intron_10_0_chr18_6239872_r.3p
GENE: (1)
chr18:6239822-6240071-


(2)
BRAIN
(5)
BREAST
(5)
CELL-LINE
(6)
CERVIX
(1)
FIBROBLAST
(2)
HEART
(3)
LIVER
(4)
OTHER
(6)
SKIN
(1)
UTERUS

Sense strand
TTTCCTGGGCCTTTGTTATGAATATAAACTGTGTGACAGTTGCCGGATATTTTTACAGGCATTTGATGGCTTTGTCCAGAGGCTAAGTGCTGACACCTGTAGACTTTGCTGTTGCTAAACATAGAAGTTTTGACAGTGGCTCAGTCCTATTTGGTGTCCTGTTTCTTTTTGTGCTTCTTCCCCTGCTGGTGCTGCGTTAGAATGGGCCAATGTCTAAAGAATTTCAGGTTGGAATGAAGCTGGAGGCCGT
............................................................................................................................(((....(((((.(((((((......)))).)))))))).)))....(((.....((......))....)))......................................................
............................................................................................................................125........................................................................200................................................
SizePerfect hitTotal NormPerfect NormSRR189782SRR444052(SRX128900)
Sample 12cDNABarcode: AF-PP-340: ACG CTC TTC . (skin)
SRR189779(GSM714639)
cell line: HEK293clip variant: PAR-CLIPenzyma. (cell line)
SRR189780(GSM714640)
cell line: HEK293clip variant: PAR-CLIPenzyma. (cell line)
SRR040010(GSM532895)
G529N. (cervix)
SRR040012(GSM532897)
G648N. (cervix)
SRR189781(GSM714641)
cell line: HEK293clip variant: PAR-CLIPenzyma. (cell line)
SRR189784SRR094129(GSM651905)
small RNA(18-35nt)small RNA deep sequencing o. (uterus)
SRR191478(GSM715588)
30genomic small RNA (size selected RNA from t. (breast)
SRR330914(SRX091752)
tissue: normal skindisease state: normal. (skin)
SRR039614(GSM531977)
HBV-infected Liver Tissue. (liver)
SRR040029(GSM532914)
G026T. (cervix)
SRR189787SRR040011(GSM532896)
G529T. (cervix)
SRR189783SRR040016(GSM532901)
G645N. (cervix)
SRR039618(GSM531981)
HBV(+) Side Tissue Sample 1. (liver)
SRR037876(GSM522374)
fibroblasts_cell_culture. (fibroblast)
TAX577590(Rovira)
total RNA. (breast)
TAX577742(Rovira)
total RNA. (breast)
SRR330862(SRX091700)
tissue: skin psoriatic involveddisease state:. (skin)
GSM450602(GSM450602)
miRNA sequencing raw reads from post-mortem s. (brain)
TAX577744(Rovira)
total RNA. (breast)
SRR040024(GSM532909)
G613N. (cervix)
SRR330866(SRX091704)
tissue: skin psoriatic involveddisease state:. (skin)
SRR330916(SRX091754)
tissue: normal skindisease state: normal. (skin)
SRR039623(GSM531986)
HCV(+) HCC Tissue Sample. (liver)
GSM450598(GSM450598)
miRNA sequencing raw reads from post-mortem s. (brain)
SRR060981(GSM569185)
Human centroblast [09-001]. (cell line)
TAX577743(Rovira)
total RNA. (breast)
SRR189777(GSM714637)
cell line: HEK293clip variant: PAR-CLIPenzyma. (cell line)
SRR342901(SRX096797)
small RNA seq of Left atrial tissue. (heart)
SRR330878(SRX091716)
tissue: skin psoriatic involveddisease state:. (skin)
SRR342897(SRX096793)
small RNA seq of Left atrial tissue. (heart)
.................................................................................................................................TTGACAGTGGCTCAGTTCTG.....................................................................................................2021.000.0021.00----------------------------------
.................................................................................................................................TTGACAGTGGCTCAGTTCCG.....................................................................................................208.000.007.00----------------------------1.00-----
.................................................................................................................................TTGACAGTGGCTCAGTCCTG.....................................................................................................207.000.007.00----------------------------------
...........................................................................................................................................................................................................................AATTTCAGGTTGGAATGAAG...........2014.004.00-4.00---------------------------------
.................................................................................................................................TTGACAGTGGCTCAGTTGTG.....................................................................................................203.000.002.00-------------------1.00--------------
.....................................................................................AGTGCTGACACCTGTAGACTTTGCTGTCGC.......................................................................................................................................303.000.00--3.00--------------------------------
.................................................................................................................................TTGACAGTGGCTCAGTTCAG.....................................................................................................202.000.002.00----------------------------------
.................................................................................................................................TTGACAGTGGCTCAGTGCTG.....................................................................................................202.000.002.00----------------------------------
.................................................................................................................................TTGACAGTGGCTCAGTTC.......................................................................................................182.000.00--------1.00--------1.00-----------------
........................................................................................................................................................................TTGTGCTTCTTCCCCTGCTGGTGCTGCG......................................................2812.002.00---2.00-------------------------------
.................................................................................................................................TTGACAGTGGCTCAGTTCTT.....................................................................................................202.000.002.00----------------------------------
.................................................................................................................................TTGACAGTGGCTCAGTTGT......................................................................................................191.000.00----------------------1.00------------
.................................................................................................................................TTGACAGTGGCTCAGTCTTG.....................................................................................................201.000.001.00----------------------------------
...................................................................................................................................................................................CCCCTGCTGGTGCTGCGTTAG..................................................2111.001.00---------------------1.00-------------
............................................................................................................................................................................................................................ATTTCAGGTTGGAATGAAGCTGG.......2311.001.00--------------------------1.00--------
................................................................................................................................................................................................................AATGTCTAAAGAATTTCAGGTTGGAATG..............2811.001.00----------1.00------------------------
.........................................................................................................................................................GTGTCCTGTTTCTTTTTA...............................................................................181.000.00-------------------------------1.00---
.....................................................................................................................................................................................................................................TGGAATGAAGCTGGAGGCCGTGTC241.000.00---------------------------1.00-------
.................................................................................................................................TTGACAGTGGCTCAGTTCC......................................................................................................191.000.00--------------1.00--------------------
.................................................................................................................................TTGACAGTGGCTCAGTGCCG.....................................................................................................201.000.001.00----------------------------------
.................................................................................................................................TTGACAGTGGCTCAGTCA.......................................................................................................181.000.00------------------------------1.00----
.................................................................................................................................TTGACAGTGGCTCAGTTTTG.....................................................................................................201.000.00---------------1.00-------------------
.................................................................................................................................TTGACAGTGGCTCAGTTGCG.....................................................................................................201.000.001.00----------------------------------
.................................................................................................................................TTGACAGTGGCTCAGTTGTT.....................................................................................................201.000.00---------1.00-------------------------
..........................................................................................................................................................TGTCCTGTTTCTTTTTGTTCTG..........................................................................221.000.00---1.00-------------------------------
.................................................................................................................................TTGACAGTGGCTCAGTTAA......................................................................................................191.000.00------------------------1.00----------
.................................................................................................................................TTGACAGTGGCTCAGTTCGG.....................................................................................................201.000.001.00----------------------------------
.................................................................................................................................TTGACAGTGGCTCAGTCCAGC....................................................................................................211.000.001.00----------------------------------
....................................................................................................................................................................................................................................TTGGAATGAAGCTGGTTTT...191.000.00----------------------------1.00------
.................................................................................................................................TTGACAGTGGCTCAGTCCTGC....................................................................................................211.000.001.00----------------------------------
.................................................................................................................................TTGACAGTGGCTCAGTTCCT.....................................................................................................201.000.00----1.00------------------------------
....................................................................................................................................ACAGTGGCTCAGTCCTGC....................................................................................................181.000.00------------------1.00----------------
.....................................................................................AGTGCTGACACCTGTTCAT..................................................................................................................................................191.000.00------1.00----------------------------
.................................................................................................................................TTGACAGTGGCTCAGTTTGC.....................................................................................................201.000.001.00----------------------------------
.................................................................................................................................TTGACAGTGGCTCAGTCCAG.....................................................................................................201.000.001.00----------------------------------
...........................................................................CCAGAGGCTAAGTGCCGA.............................................................................................................................................................181.000.00-------------------1.00---------------
................TATGAATATAAACTGTGAAA......................................................................................................................................................................................................................201.000.00-------------1.00---------------------
..................................................................................................................................TGACAGTGGCTCAGTTATC.....................................................................................................191.000.00----1.00------------------------------
.................................................................................................................................TTGACAGTGGCTCAGTTACA.....................................................................................................201.000.00----------------1.00------------------
...........................................................................................................................................................................................GGTGCTGCGTTAGAATGGGCCAATG......................................2511.001.00-----------1.00-----------------------
................................................................................................CTGTAGACTTTGCTGTTGCTAAAC..................................................................................................................................2411.001.00-------------------------1.00---------
.......................................................................................................................................................TGGTGTCCTGTTTCTATTG................................................................................191.000.00-------1.00---------------------------
..............................................................................................ACCTGTAGACTTTGC.............................................................................................................................................1540.250.25--------------------------------0.25--

Antisense strand
TTTCCTGGGCCTTTGTTATGAATATAAACTGTGTGACAGTTGCCGGATATTTTTACAGGCATTTGATGGCTTTGTCCAGAGGCTAAGTGCTGACACCTGTAGACTTTGCTGTTGCTAAACATAGAAGTTTTGACAGTGGCTCAGTCCTATTTGGTGTCCTGTTTCTTTTTGTGCTTCTTCCCCTGCTGGTGCTGCGTTAGAATGGGCCAATGTCTAAAGAATTTCAGGTTGGAATGAAGCTGGAGGCCGT
............................................................................................................................(((....(((((.(((((((......)))).)))))))).)))....(((.....((......))....)))......................................................
............................................................................................................................125........................................................................200................................................
SizePerfect hitTotal NormPerfect NormSRR189782SRR444052(SRX128900)
Sample 12cDNABarcode: AF-PP-340: ACG CTC TTC . (skin)
SRR189779(GSM714639)
cell line: HEK293clip variant: PAR-CLIPenzyma. (cell line)
SRR189780(GSM714640)
cell line: HEK293clip variant: PAR-CLIPenzyma. (cell line)
SRR040010(GSM532895)
G529N. (cervix)
SRR040012(GSM532897)
G648N. (cervix)
SRR189781(GSM714641)
cell line: HEK293clip variant: PAR-CLIPenzyma. (cell line)
SRR189784SRR094129(GSM651905)
small RNA(18-35nt)small RNA deep sequencing o. (uterus)
SRR191478(GSM715588)
30genomic small RNA (size selected RNA from t. (breast)
SRR330914(SRX091752)
tissue: normal skindisease state: normal. (skin)
SRR039614(GSM531977)
HBV-infected Liver Tissue. (liver)
SRR040029(GSM532914)
G026T. (cervix)
SRR189787SRR040011(GSM532896)
G529T. (cervix)
SRR189783SRR040016(GSM532901)
G645N. (cervix)
SRR039618(GSM531981)
HBV(+) Side Tissue Sample 1. (liver)
SRR037876(GSM522374)
fibroblasts_cell_culture. (fibroblast)
TAX577590(Rovira)
total RNA. (breast)
TAX577742(Rovira)
total RNA. (breast)
SRR330862(SRX091700)
tissue: skin psoriatic involveddisease state:. (skin)
GSM450602(GSM450602)
miRNA sequencing raw reads from post-mortem s. (brain)
TAX577744(Rovira)
total RNA. (breast)
SRR040024(GSM532909)
G613N. (cervix)
SRR330866(SRX091704)
tissue: skin psoriatic involveddisease state:. (skin)
SRR330916(SRX091754)
tissue: normal skindisease state: normal. (skin)
SRR039623(GSM531986)
HCV(+) HCC Tissue Sample. (liver)
GSM450598(GSM450598)
miRNA sequencing raw reads from post-mortem s. (brain)
SRR060981(GSM569185)
Human centroblast [09-001]. (cell line)
TAX577743(Rovira)
total RNA. (breast)
SRR189777(GSM714637)
cell line: HEK293clip variant: PAR-CLIPenzyma. (cell line)
SRR342901(SRX096797)
small RNA seq of Left atrial tissue. (heart)
SRR330878(SRX091716)
tissue: skin psoriatic involveddisease state:. (skin)
SRR342897(SRX096793)
small RNA seq of Left atrial tissue. (heart)
..........................................................................................................................................................................................TGGTGCTGCGTTAGAC................................................ 161.000.00------1.00----------------------------
.................................................................................................TGTAGACTTTGCTGTTGATGA.................................................................................................................................... 211.000.00-----1.00-----------------------------
..TCCTGGGCCTTTGTTCTG...................................................................................................................................................................................................................................... 181.000.00------------1.00----------------------
........................................................................................................................................................................TTGTGCTTCTTCCCCTCGT............................................................... 191.000.00-----------------------1.00-----------
.................................................................................................TGTAGACTTTGCTGTTGCTAA.................................................................................................................................... 211.000.00-----1.00-----------------------------
............................................................................................................................................................................CAGCAGGGGAAGAAGC.............................................................. 1660.170.17---------------------------------0.17-
..........................................................................................................................................CAAATAGGACTGAGC................................................................................................. 1570.140.14----------------------------------0.14