ID: uc002kmr.2_intron_2_0_chr18_5294001_r.5p
GENE: (1)
chr18:5295612-5295861-


(6)
AGO2.ip
(9)
B-CELL
(1)
BRAIN
(7)
BREAST
(31)
CELL-LINE
(11)
CERVIX
(4)
HEART
(2)
HELA
(6)
LIVER
(2)
OTHER
(1)
RRP40.ip
(16)
SKIN

Sense strand
AGCGAGCGCGGGGAACCCACGGCAGTGTCTGTGCCTGTGCCAGGCTGCAGGTAAGCGCGGGCCAGGGTGCGGAAGGGGCTGGGGCCGTCCGCAAGGCGGGCGCGGGGGCGGCCGGCGGCTGGCGGGGCGGCCCGGAAGACGCGCGTTCTCGCCGAGCTCTGGGGCACCAGCCAGCTCCAGGATGTGCGGCGGCCGCCAGCGGCGCGGCGCGGTGCGAGCGGGGACGGGCGTGGGCCAGGGTTGGGCGTGG
.......................................................(((.((((....((((((...(((....))).))))))..((....))......)))).))).....................................................................................................................................
..................................................51.................................................................118..................................................................................................................................
SizePerfect hitTotal NormPerfect NormSRR207110(GSM721072)
Nuclear RNA. (cell line)
SRR033712(GSM497057)
Burkitt Lymphoma (BL510). (B cell)
SRR387910(GSM843862)
antibody for ip: Ago2. (ago2 cell line)
GSM956925AGO2Paz8(GSM956925)
"cell line: HEK293 cell linepassages: 15-20ip. (ago2 cell line)
GSM956925Paz8D5(GSM956925)
"cell line: HEK293 cell linepassages: 15-20ip. (cell line)
SRR326279(GSM769509)
cytoplasmic fraction was isolated using PARIS. (cell line)
DRR001488(DRX001042)
"Hela short nuclear cell fraction, LNA(+)". (hela)
SRR039615(GSM531978)
Severe Chronic Hepatitis B Liver Tissue. (liver)
SRR207116(GSM721078)
Nuclear RNA. (cell line)
SRR015361(GSM380326)
Memory B cells (MM55). (B cell)
SRR207111(GSM721073)
Whole cell RNA. (cell line)
SRR444048(SRX128896)
Sample 8cDNABarcode: AF-PP-333: ACG CTC TTC C. (skin)
SRR390724(GSM850203)
small rna immunoprecipitated. (cell line)
DRR000555(DRX000313)
"THP-1 whole cell RNA, no treatment". (cell line)
SRR033722(GSM497067)
KMS12 cell line (KMS12). (B cell)
SRR342894(SRX096790)
small RNA seq of Right atrial tissue. (heart)
SRR040036(GSM532921)
G243N. (cervix)
GSM956925PAZD5GSM956925Ago2D5(GSM956925)
"cell line: HEK293 cell linepassages: 15-20ip. (ago2 cell line)
DRR001489(DRX001043)
"Hela short nuclear cell fraction, control". (hela)
SRR039613(GSM531976)
Human Normal Liver Tissue Sample 3. (liver)
SRR039622(GSM531985)
HCV(+) Adjacent Tissue Sample. (liver)
GSM956925Ago2PAZ(GSM956925)
"cell line: HEK293 cell linepassages: 15-20ip. (ago2 cell line)
SRR037944(GSM510482)
293DcrTN_cand5. (cell line)
SRR553573(SRX182779)
source: Cerebellum. (Cerebellum)
SRR326282(GSM769512)
"Dicer mRNA was knocked down using siDicer, t. (cell line)
SRR207112(GSM721074)
RRP40 knockdown. (RRP40 cell line)
SRR444059(SRX128907)
Sample 17cDNABarcode: AF-PP-339: ACG CTC TTC . (skin)
RoviraIPAgo2(Rovira)
total RNA. (ago2 breast)
SRR039616(GSM531979)
HBV(+) Distal Tissue Sample 1. (liver)
SRR040018(GSM532903)
G701N. (cervix)
SRR040040(GSM532925)
G612N. (cervix)
SRR033718(GSM497063)
Multiple Myeloma (U266). (B cell)
SRR015359(GSM380324)
Germinal Center B cell (GC136). (B cell)
SRR060983(GSM569187)
Human pre-germinal center B cell [09-001]. (cell line)
SRR330857(SRX091695)
tissue: skin psoriatic involveddisease state:. (skin)
SRR039620(GSM531983)
HBV(+) Adjacent Tissue Sample 2. (liver)
SRR553572(SRX182778)
source: Frontal Cortex. (Frontal Cortex)
SRR330892(SRX091730)
tissue: skin psoriatic uninvolveddisease stat. (skin)
SRR040029(GSM532914)
G026T. (cervix)
SRR040037(GSM532922)
G243T. (cervix)
SRR040021(GSM532906)
G761T_2. (cervix)
DRR000557(DRX000315)
"THP-1 whole cell RNA, after 3 day treatment . (cell line)
SRR330863(SRX091701)
tissue: skin psoriatic involveddisease state:. (skin)
GSM532880(GSM532880)
G659T. (cervix)
SRR060985(GSM569189)
Human naive B cell [09-001]. (cell line)
SRR330898(SRX091736)
tissue: skin psoriatic uninvolveddisease stat. (skin)
SRR191630(GSM715740)
70genomic small RNA (size selected RNA from t. (breast)
SRR330885(SRX091723)
tissue: skin psoriatic uninvolveddisease stat. (skin)
SRR040009(GSM532894)
G727T. (cervix)
SRR033724(GSM497069)
L428 cell line (L428). (B cell)
SRR444049(SRX128897)
Sample 9cDNABarcode: AF-PP-334: ACG CTC TTC C. (skin)
SRR330923(SRX091761)
tissue: normal skindisease state: normal. (skin)
SRR037937(GSM510475)
293cand2. (cell line)
SRR040031(GSM532916)
G013T. (cervix)
SRR033726(GSM497071)
Mututated CLL (CLLM633). (B cell)
SRR033727(GSM497072)
HIV-positive DL (HIV412). (B cell)
SRR040022(GSM532907)
G575N. (cervix)
SRR189780(GSM714640)
cell line: HEK293clip variant: PAR-CLIPenzyma. (cell line)
SRR037938(GSM510476)
293Red. (cell line)
SRR330919(SRX091757)
tissue: normal skindisease state: normal. (skin)
TAX577742(Rovira)
total RNA. (breast)
SRR390723(GSM850202)
total small RNA. (cell line)
SRR039635(GSM518472)
THP1_nuc_sRNAs. (cell line)
SRR037941(GSM510479)
293DroshaTN. (cell line)
GSM956925Ago2(GSM956925)
"cell line: HEK293 cell linepassages: 15-20ip. (ago2 cell line)
SRR107296(GSM677703)
18-30nt fraction of small RNA. (cell line)
TAX577744(Rovira)
total RNA. (breast)
SRR038863(GSM458546)
MM603. (cell line)
SRR342897(SRX096793)
small RNA seq of Left atrial tissue. (heart)
SRR040020(GSM532905)
G699N_2. (cervix)
SRR039619(GSM531982)
HBV(+) HCC Tissue Sample 1. (liver)
SRR330866(SRX091704)
tissue: skin psoriatic involveddisease state:. (skin)
SRR033729(GSM497074)
splenic MZL (Splenic414). (B cell)
SRR553574(SRX182780)
source: Heart. (Heart)
SRR029125(GSM416754)
U2OS. (cell line)
SRR330902(SRX091740)
tissue: skin psoriatic uninvolveddisease stat. (skin)
SRR330884(SRX091722)
tissue: skin psoriatic uninvolveddisease stat. (skin)
SRR342896(SRX096792)
small RNA seq of Right atrial tissue. (heart)
SRR189781(GSM714641)
cell line: HEK293clip variant: PAR-CLIPenzyma. (cell line)
SRR330879(SRX091717)
tissue: skin psoriatic involveddisease state:. (skin)
GSM450604(GSM450604)
miRNA sequencing raw reads from post-mortem s. (brain)
TAX577741(Rovira)
total RNA. (breast)
SRR189779(GSM714639)
cell line: HEK293clip variant: PAR-CLIPenzyma. (cell line)
TAX577743(Rovira)
total RNA. (breast)
SRR343334SRR029054(GSM402329)
MCF7_smallRNAseq. (cell line)
SRR015448(SRR015448)
cytoplasmic small RNAs. (breast)
SRR330914(SRX091752)
tissue: normal skindisease state: normal. (skin)
SRR330878(SRX091716)
tissue: skin psoriatic involveddisease state:. (skin)
SRR326281(GSM769511)
"Dicer mRNA was knocked down using siDicer, c. (cell line)
...............................................................................................GCGGGCGCGGGGGCGG...........................................................................................................................................16011.0011.00---4.002.00------------1.002.00-------------------------------------------1.00--1.00-------------------------
..........................GTCTGTGCCTGTGCCAGGC.............................................................................................................................................................................................................1918.008.008.00------------------------------------------------------------------------------------------
...............................................................................................GCGGGCGCGGGGGCGGTTC........................................................................................................................................1906.0011.00--------3.00--------------------1.00---1.00-----------------1.00---------------------------------------
................................................................................................CGGGCGCGGGGGCGG...........................................................................................................................................1506.006.00----1.00--------2.00---1.00----2.00--------------------------------------------------------------------
..............................................................................................GGCGGGCGCGGGGGCGGTT.........................................................................................................................................195.000.00-1.00--------------------------1.00---1.00---1.00---1.00--------------------------------------------------
............................................................................................................................................................................................................CGGCGCGGTGCGAGCGGG............................1813.003.00---------2.00----------------------------------------------1.00----------------------------------
...............................................................................................GCGGGCGCGGGGGCGGTT.........................................................................................................................................1803.0011.00--2.00------------------1.00---------------------------------------------------------------------
.....................................................................CGGAAGGGGCTGGGGCCGT..................................................................................................................................................................1913.003.003.00------------------------------------------------------------------------------------------
...............................................................................................................................................................................................................CGCGGTGCGAGCGGGGA..........................1712.002.00-----------2.00-------------------------------------------------------------------------------
..............................................................................................................................................GCGTTCTCGCCGAGCTCTGGGGC.....................................................................................2312.002.00-------2.00-----------------------------------------------------------------------------------
...............................................................................................GCGGGCGCGGGGGCG............................................................................................................................................1502.002.00----1.00-------1.00------------------------------------------------------------------------------
.....................................................................CGGAAGGGGCTGGGGCAGAT.................................................................................................................................................................202.000.00--2.00----------------------------------------------------------------------------------------
..............................................................................................GGCGGGCGCGGGGGCGGTTC........................................................................................................................................202.000.00-------------------------------------1.00----------1.00------------------------------------------
....................................................................GCGGAAGGGGCTGGGTATA...................................................................................................................................................................192.000.00--------------------2.00----------------------------------------------------------------------
..................................................................GTGCGGAAGGGGCTGGGGCCGTC.................................................................................................................................................................2312.002.00--------------1.00------------------------------1.00---------------------------------------------
........................................................GCGGGCCAGGGTGCGGCCGC..............................................................................................................................................................................201.000.00------------------------------------------------------------------------1.00------------------
..............................................................................................................................................................................................................................GACGGGCGTGGGCCAGGG..........1811.001.00---------------1.00---------------------------------------------------------------------------
.......................................................................................................GGGGGCGGCCGGCGGACT.................................................................................................................................181.000.00----------------------------------------------------------------------1.00--------------------
.......................................................................................................GGGGGCGGCCGGCGGGGGA................................................................................................................................191.000.00-----1.00-------------------------------------------------------------------------------------
..................................................GTAAGCGCGGGCCAGAAGA.....................................................................................................................................................................................191.000.00--------------------------------------------------------------------1.00----------------------
.......................................................................................TCCGCAAGGCGGGCGCGGGGGCGGC..........................................................................................................................................2511.001.00--------------------------------------1.00----------------------------------------------------
...................................................................................................................CGGCTGGCGGGGCGGTC......................................................................................................................171.000.00---------------------------1.00---------------------------------------------------------------
.....................................................................CGGAAGGGGCTGGGGGTG...................................................................................................................................................................181.000.00-----------------------------------------------------------1.00-------------------------------
....................................................................GCGGAAGGGGCTGGGGCC....................................................................................................................................................................1811.001.00----------------------------------1.00--------------------------------------------------------
..............................................................................................GGCGGGCGCGGGGGCGGCTGC.......................................................................................................................................211.000.00---------------------------------------------------------1.00---------------------------------
.......................................................................................................GGGGGCGGCCGGCGGCGG.................................................................................................................................181.000.00--------------------------------------------1.00----------------------------------------------
.....................................................................CGGAAGGGGCTGGGGTCGT..................................................................................................................................................................191.000.001.00------------------------------------------------------------------------------------------
.....................................................................CGGAAGGGGCTGGGGCATTA.................................................................................................................................................................201.000.00-----------------------------------1.00-------------------------------------------------------
...............................................................................................GCGGGCGCGGGGGCGGCT.........................................................................................................................................181.000.00-----------------------------------------------1.00-------------------------------------------
..............................................................................................GGCGGGCGCGGGGGCGGTTTT.......................................................................................................................................211.000.00---------------------1.00---------------------------------------------------------------------
.............................................................................................AGGCGGGCGCGGGGGGGGG..........................................................................................................................................191.000.00----------------1.00--------------------------------------------------------------------------
.....GCGCGGGGAACCCACGGCA..................................................................................................................................................................................................................................1911.001.00--------------------------------------------------1.00----------------------------------------
........................................................................................................GGGGCGGCCGGCGGCTGT................................................................................................................................181.000.00-------------------------------------------------1.00-----------------------------------------
.....................................................................................................................................................................................................................................GTGGGCCAGGGTTGGGC....1711.001.00------------------------------------------1.00------------------------------------------------
.......................................................................................................GGGGGCGGCCGGCGGAGGG................................................................................................................................191.000.00-------------------1.00-----------------------------------------------------------------------
..............................................................................................GGCGGGCGCGGGGGCGGATCG.......................................................................................................................................211.000.00---------1.00---------------------------------------------------------------------------------
..............................................................................................................................................................................CTCCAGGATGTGCGGCGGC.........................................................1911.001.00-------------------------------------------------------------------------1.00-----------------
...............................................................................................................................................................................................GCCGCCAGCGGCGCGGCGCGGTGCGAGCGGGGAC.........................3411.001.00---------------------------------------------------------------------1.00---------------------
.......................................................................................................................................................CCGAGCTCTGGGGCACCAGCCAG............................................................................2311.001.00-----------------------------------------------------------------------1.00-------------------
...........................................................................................................................GGGGCGGCCCGGAAGACGCG...........................................................................................................2011.001.00-1.00-----------------------------------------------------------------------------------------
.............................................................................................................................................................................GCTCCAGGATGTGCGGCG...........................................................1811.001.00------1.00------------------------------------------------------------------------------------
..........................................................................................................................................................................................................CGCGGCGCGGTGCGAGCGGGGAC.........................2311.001.00--------------------------1.00----------------------------------------------------------------
.....................................................................................................................................................................ACCAGCCAGCTCCAGGATGTGC...............................................................2211.001.00---------------------------------------------------------------------------1.00---------------
..................................................................GTGCGGAAGGGGCTGGGG......................................................................................................................................................................1811.001.00------------------------------------------------------1.00------------------------------------
.................................................................................................................................................TTCTCGCCGAGCTCTGGGGCACC..................................................................................2311.001.00-------------------------------------------1.00-----------------------------------------------
................................................................................................................CGGCGGCTGGCGGGGCGGG.......................................................................................................................191.000.00--------------------------------------------------------------------------1.00----------------
......................................................GCGCGGGCCAGGGTGGAG..................................................................................................................................................................................181.000.00----------------------------------------------------------------1.00--------------------------
..............................................................................................GGCGGGCGCGGGGGCGGTTA........................................................................................................................................201.000.00-------1.00-----------------------------------------------------------------------------------
...............................................................................................GCGGGCGCGGGGGCGGCTC........................................................................................................................................191.000.00-------------------------------------------------------1.00-----------------------------------
..........................................................................................................................................................................................................................CGGGGACGGGCGTGGGGT..............181.000.00-----------------------------------------1.00-------------------------------------------------
......................................................................................................CGGGGGCGGCCGGCGGCGGC................................................................................................................................201.000.00-------------------------1.00-----------------------------------------------------------------
.............................................................CCAGGGTGCGGAAGGGGC...........................................................................................................................................................................1820.500.50----------------------------------------------------------------------------0.50--------------
........................................................GCGGGCCAGGGTGCGGA.................................................................................................................................................................................1720.500.50----------0.50--------------------------------------------------------------------------------
...............................................................AGGGTGCGGAAGGGGC...........................................................................................................................................................................1630.330.33-------------------------0.33-----------------------------------------------------------------
...................................................................................................................................................................................................................................GCGTGGGCCAGGGTTGG......1730.330.33-----------0.33-------------------------------------------------------------------------------
............................................................GCCAGGGTGCGGAAG...............................................................................................................................................................................1540.250.25------------------------0.25------------------------------------------------------------------
................................................................................................CGGGCGCGGGGGCGGC..........................................................................................................................................1680.250.25----------------------------------------------------------------------------0.12------------0.12-
...................................................................................................................CGGCTGGCGGGGCGGCGA.....................................................................................................................1840.250.25---------------------------------------------------------------------------------0.25---------
...................................................................................................................CGGCTGGCGGGGCGGC.......................................................................................................................1640.250.25--------------------------------------------------------------------------------0.25----------
........................................................................AAGGGGCTGGGGCCG...................................................................................................................................................................1550.200.20-----------------------------------------------------------------------------------0.20-------

Antisense strand
AGCGAGCGCGGGGAACCCACGGCAGTGTCTGTGCCTGTGCCAGGCTGCAGGTAAGCGCGGGCCAGGGTGCGGAAGGGGCTGGGGCCGTCCGCAAGGCGGGCGCGGGGGCGGCCGGCGGCTGGCGGGGCGGCCCGGAAGACGCGCGTTCTCGCCGAGCTCTGGGGCACCAGCCAGCTCCAGGATGTGCGGCGGCCGCCAGCGGCGCGGCGCGGTGCGAGCGGGGACGGGCGTGGGCCAGGGTTGGGCGTGG
.......................................................(((.((((....((((((...(((....))).))))))..((....))......)))).))).....................................................................................................................................
..................................................51.................................................................118..................................................................................................................................
SizePerfect hitTotal NormPerfect NormSRR207110(GSM721072)
Nuclear RNA. (cell line)
SRR033712(GSM497057)
Burkitt Lymphoma (BL510). (B cell)
SRR387910(GSM843862)
antibody for ip: Ago2. (ago2 cell line)
GSM956925AGO2Paz8(GSM956925)
"cell line: HEK293 cell linepassages: 15-20ip. (ago2 cell line)
GSM956925Paz8D5(GSM956925)
"cell line: HEK293 cell linepassages: 15-20ip. (cell line)
SRR326279(GSM769509)
cytoplasmic fraction was isolated using PARIS. (cell line)
DRR001488(DRX001042)
"Hela short nuclear cell fraction, LNA(+)". (hela)
SRR039615(GSM531978)
Severe Chronic Hepatitis B Liver Tissue. (liver)
SRR207116(GSM721078)
Nuclear RNA. (cell line)
SRR015361(GSM380326)
Memory B cells (MM55). (B cell)
SRR207111(GSM721073)
Whole cell RNA. (cell line)
SRR444048(SRX128896)
Sample 8cDNABarcode: AF-PP-333: ACG CTC TTC C. (skin)
SRR390724(GSM850203)
small rna immunoprecipitated. (cell line)
DRR000555(DRX000313)
"THP-1 whole cell RNA, no treatment". (cell line)
SRR033722(GSM497067)
KMS12 cell line (KMS12). (B cell)
SRR342894(SRX096790)
small RNA seq of Right atrial tissue. (heart)
SRR040036(GSM532921)
G243N. (cervix)
GSM956925PAZD5GSM956925Ago2D5(GSM956925)
"cell line: HEK293 cell linepassages: 15-20ip. (ago2 cell line)
DRR001489(DRX001043)
"Hela short nuclear cell fraction, control". (hela)
SRR039613(GSM531976)
Human Normal Liver Tissue Sample 3. (liver)
SRR039622(GSM531985)
HCV(+) Adjacent Tissue Sample. (liver)
GSM956925Ago2PAZ(GSM956925)
"cell line: HEK293 cell linepassages: 15-20ip. (ago2 cell line)
SRR037944(GSM510482)
293DcrTN_cand5. (cell line)
SRR553573(SRX182779)
source: Cerebellum. (Cerebellum)
SRR326282(GSM769512)
"Dicer mRNA was knocked down using siDicer, t. (cell line)
SRR207112(GSM721074)
RRP40 knockdown. (RRP40 cell line)
SRR444059(SRX128907)
Sample 17cDNABarcode: AF-PP-339: ACG CTC TTC . (skin)
RoviraIPAgo2(Rovira)
total RNA. (ago2 breast)
SRR039616(GSM531979)
HBV(+) Distal Tissue Sample 1. (liver)
SRR040018(GSM532903)
G701N. (cervix)
SRR040040(GSM532925)
G612N. (cervix)
SRR033718(GSM497063)
Multiple Myeloma (U266). (B cell)
SRR015359(GSM380324)
Germinal Center B cell (GC136). (B cell)
SRR060983(GSM569187)
Human pre-germinal center B cell [09-001]. (cell line)
SRR330857(SRX091695)
tissue: skin psoriatic involveddisease state:. (skin)
SRR039620(GSM531983)
HBV(+) Adjacent Tissue Sample 2. (liver)
SRR553572(SRX182778)
source: Frontal Cortex. (Frontal Cortex)
SRR330892(SRX091730)
tissue: skin psoriatic uninvolveddisease stat. (skin)
SRR040029(GSM532914)
G026T. (cervix)
SRR040037(GSM532922)
G243T. (cervix)
SRR040021(GSM532906)
G761T_2. (cervix)
DRR000557(DRX000315)
"THP-1 whole cell RNA, after 3 day treatment . (cell line)
SRR330863(SRX091701)
tissue: skin psoriatic involveddisease state:. (skin)
GSM532880(GSM532880)
G659T. (cervix)
SRR060985(GSM569189)
Human naive B cell [09-001]. (cell line)
SRR330898(SRX091736)
tissue: skin psoriatic uninvolveddisease stat. (skin)
SRR191630(GSM715740)
70genomic small RNA (size selected RNA from t. (breast)
SRR330885(SRX091723)
tissue: skin psoriatic uninvolveddisease stat. (skin)
SRR040009(GSM532894)
G727T. (cervix)
SRR033724(GSM497069)
L428 cell line (L428). (B cell)
SRR444049(SRX128897)
Sample 9cDNABarcode: AF-PP-334: ACG CTC TTC C. (skin)
SRR330923(SRX091761)
tissue: normal skindisease state: normal. (skin)
SRR037937(GSM510475)
293cand2. (cell line)
SRR040031(GSM532916)
G013T. (cervix)
SRR033726(GSM497071)
Mututated CLL (CLLM633). (B cell)
SRR033727(GSM497072)
HIV-positive DL (HIV412). (B cell)
SRR040022(GSM532907)
G575N. (cervix)
SRR189780(GSM714640)
cell line: HEK293clip variant: PAR-CLIPenzyma. (cell line)
SRR037938(GSM510476)
293Red. (cell line)
SRR330919(SRX091757)
tissue: normal skindisease state: normal. (skin)
TAX577742(Rovira)
total RNA. (breast)
SRR390723(GSM850202)
total small RNA. (cell line)
SRR039635(GSM518472)
THP1_nuc_sRNAs. (cell line)
SRR037941(GSM510479)
293DroshaTN. (cell line)
GSM956925Ago2(GSM956925)
"cell line: HEK293 cell linepassages: 15-20ip. (ago2 cell line)
SRR107296(GSM677703)
18-30nt fraction of small RNA. (cell line)
TAX577744(Rovira)
total RNA. (breast)
SRR038863(GSM458546)
MM603. (cell line)
SRR342897(SRX096793)
small RNA seq of Left atrial tissue. (heart)
SRR040020(GSM532905)
G699N_2. (cervix)
SRR039619(GSM531982)
HBV(+) HCC Tissue Sample 1. (liver)
SRR330866(SRX091704)
tissue: skin psoriatic involveddisease state:. (skin)
SRR033729(GSM497074)
splenic MZL (Splenic414). (B cell)
SRR553574(SRX182780)
source: Heart. (Heart)
SRR029125(GSM416754)
U2OS. (cell line)
SRR330902(SRX091740)
tissue: skin psoriatic uninvolveddisease stat. (skin)
SRR330884(SRX091722)
tissue: skin psoriatic uninvolveddisease stat. (skin)
SRR342896(SRX096792)
small RNA seq of Right atrial tissue. (heart)
SRR189781(GSM714641)
cell line: HEK293clip variant: PAR-CLIPenzyma. (cell line)
SRR330879(SRX091717)
tissue: skin psoriatic involveddisease state:. (skin)
GSM450604(GSM450604)
miRNA sequencing raw reads from post-mortem s. (brain)
TAX577741(Rovira)
total RNA. (breast)
SRR189779(GSM714639)
cell line: HEK293clip variant: PAR-CLIPenzyma. (cell line)
TAX577743(Rovira)
total RNA. (breast)
SRR343334SRR029054(GSM402329)
MCF7_smallRNAseq. (cell line)
SRR015448(SRR015448)
cytoplasmic small RNAs. (breast)
SRR330914(SRX091752)
tissue: normal skindisease state: normal. (skin)
SRR330878(SRX091716)
tissue: skin psoriatic involveddisease state:. (skin)
SRR326281(GSM769511)
"Dicer mRNA was knocked down using siDicer, c. (cell line)
.............................................................................................................................................GAGCTCGGCGAGAACGCG........................................................................................... 1814.004.002.00---------1.00--------1.00-----------------------------------------------------------------------
...........................................................................................................................................GAGCTCGGCGAGAACGCGCG........................................................................................... 2012.002.00-1.00------------1.00----------------------------------------------------------------------------
.........................................................................................................................................GAGCTCGGCGAGAACGCGCGTC........................................................................................... 2212.002.00-2.00-----------------------------------------------------------------------------------------
...........................................................................................................................................................................................................CCCGCTCGCACCGCGCCGC............................ 1912.002.00-----------------------2.00-------------------------------------------------------------------
...................................................................................................................................................GTGCCCCAGAGCTCGGCGAG................................................................................... 2011.001.00----------------------------------------------------1.00--------------------------------------
.........................................................................................................................................AGCTCGGCGAGAACGCGCGTC............................................................................................ 2111.001.00---------------------------------------------------------------1.00---------------------------
..........................................................GGGCCAGGGTGCGGACGCG............................................................................................................................................................................. 191.000.00------------------------------1.00------------------------------------------------------------
..................................CTGTGCCAGGCTGCAGGTCCTG.................................................................................................................................................................................................. 221.000.00----------------------------------------------------------1.00--------------------------------
......................................................................................................................................................................CCAGCCAGCTCCAGGAGG.................................................................. 181.000.00-------------------------------1.00-----------------------------------------------------------
.................................................................................................GGGCGCGGGGGCGGCCCTCC..................................................................................................................................... 201.000.00-------------------------------------------------------------1.00-----------------------------
................................................................................................CGGGCGCGGGGGCGGCCGTC...................................................................................................................................... 201.000.00------------------------------------------------------------1.00------------------------------
....................................................................................................CGCGGGGGCGGCCGGCGGG................................................................................................................................... 191.000.00-----1.00-------------------------------------------------------------------------------------
.............................................................................................................................................CTCGGCGAGAACGCG.............................................................................................. 1511.001.00------1.00------------------------------------------------------------------------------------
....................................................................................................CGCGGGGGCGGCCGGCGT.................................................................................................................................... 181.000.00----------------1.00--------------------------------------------------------------------------
.................................................................................................................................................................................................................................GGGCGTGGGCCAGGGATCT...... 191.000.00----------------------------------------------1.00--------------------------------------------
.......................................................................................................................................................................................................CGGCGCGGCGCGGTGCGG................................. 181.000.00-----------------------------------------------------1.00-------------------------------------
.......................................................................................................GGGGGCGGCCGGCGGCCC................................................................................................................................. 181.000.00-------------------------------------------------------------------1.00-----------------------
..............................................................................................................................................................................................................CCCCGCTCGCACCGCGC........................... 1711.001.00------1.00------------------------------------------------------------------------------------
................................................................................................................................................................................CCAGGATGTGCGGCGGTTT....................................................... 191.000.00---------------------------------------1.00---------------------------------------------------
....................................................................................................................................................CTGGTGCCCCAGAGCTCGGCGA................................................................................ 2211.001.00----------1.00--------------------------------------------------------------------------------
..................................................................................................................................................GCTGGCTGGTGCCCCAGAGCTCGGCGAGA........................................................................... 2911.001.00------------------------1.00------------------------------------------------------------------
..............................................................................CCGCCTTGCGGACGGCCCCAG....................................................................................................................................................... 2111.001.00------------1.00------------------------------------------------------------------------------
.......................................................................................................................................................................................................CGGCGCGGCGCGGTGCGGCG............................... 201.000.00-----1.00-------------------------------------------------------------------------------------
................................................................................................CGGGCGCGGGGGCGGCCGTCAC.................................................................................................................................... 221.000.00------------------------------------------------------------------1.00------------------------
.......................................................................................................GGGGGCGGCCGGCGGCTTCGC.............................................................................................................................. 211.000.00---------------1.00---------------------------------------------------------------------------
..................................................................................................................................................CCAGAGCTCGGCGAGA........................................................................................ 1620.500.50-------------------------------------------------------------------------------0.50-----------
................................................................................................CGGCCGCCCCCGCGCCCG........................................................................................................................................ 1820.500.50-----------------------------------------------------------------------------0.50-------------
.........................................................................................................................................................................CACATCCTGGAGCTGGC................................................................ 1720.500.50------------------------------------------------------------------------------0.50------------
......................................................................................................................................................................ATCCTGGAGCTGGCTGG................................................................... 1760.500.50------0.17-------------------0.17------------------------------------------------------------0.17---
..................................ACCTGCAGCCTGGCACAG...................................................................................................................................................................................................... 1820.500.50------0.50------------------------------------------------------------------------------------
..............................................................CCCCTTCCGCACCCTG............................................................................................................................................................................ 1620.500.50------------------------0.50------------------------------------------------------------------
...............................................................................................GCCGCCCCCGCGCCCGC.......................................................................................................................................... 1760.500.50-----0.33------------------0.17------------------------------------------------------------------
.................................................................................................CGGCCGCCCCCGCGCCC........................................................................................................................................ 1750.400.40----------------------------------------------------------------------------------0.20-0.20------
................................................................................................GCCGCCCCCGCGCCCG.......................................................................................................................................... 1680.250.25----------------------------------------------------------------------------------------0.12-0.12
.......................................................................................................GCCGCCGGCCGCCCCC................................................................................................................................... 1650.200.20-----0.20-------------------------------------------------------------------------------------
......................................................................................................................................................................CCAGCCAGCTCCAGGATCAT................................................................ 200.170.00--------------------------------------------------------------------------------------0.17----
...................................................................................................................................................................................................GCGCCGCGCCGCTGG........................................ 1560.170.17-------------------------------------------------------------------------------------0.17-----
.....................................................................................................CGCCGGCCGCCCCCGC..................................................................................................................................... 1670.140.14-----0.14-------------------------------------------------------------------------------------
.......................................................................................................................................................................................................................CGCCCGTCCCCGCTC.................... 1580.120.12---------------------------0.12---------------------------------------------------------------