ID: uc002klh.3_intron_6_0_chr18_2563859_r.3p
GENE: (2)
chr18:2563809-2564058-


(1)
B-CELL
(8)
CELL-LINE
(2)
HEART
(6)
OTHER
(23)
SKIN

Sense strand
TGTTGTTGTTTTTAATTTACTTTGGGAAAGCTTACCTCCTCACTCCATACCCTTTGCATTGATTTTGACCTCAGTAGACAATTACTACTATTAATTATTAATTATTATTAGACAGATATAAGACATAAATAATGTTATAATGAAAAAGCAAAATATTAATGGCAACATAACTTTTCCCCTGTAATTGATCTACCCTTTAGAAGCGTAAAAGATGTGTTGTTTTCAATCAAGGTGAATTGGATGCTATGGA
....................................................(((((...............(((((.......)))))............(((((((..((((..(((.........))).)))))))))))....)))))..................................................................................................
..................................................51...................................................................................................152................................................................................................
SizePerfect hitTotal NormPerfect NormSRR314796(SRX084354)
"Total RNA, fractionated (15-30nt)". (cell line)
SRR343336SRR343337SRR343335SRR387909(GSM843861)
specific-host: Homo sapienshost cell line: Su. (cell line)
SRR330923(SRX091761)
tissue: normal skindisease state: normal. (skin)
SRR330893(SRX091731)
tissue: skin psoriatic uninvolveddisease stat. (skin)
SRR330890(SRX091728)
tissue: skin psoriatic uninvolveddisease stat. (skin)
SRR189785SRR033726(GSM497071)
Mututated CLL (CLLM633). (B cell)
SRR189776(GSM714636)
cell line: HEK293clip variant: CLIPenzymatic . (cell line)
SRR330872(SRX091710)
tissue: skin psoriatic involveddisease state:. (skin)
SRR189784SRR330880(SRX091718)
tissue: skin psoriatic involveddisease state:. (skin)
SRR330879(SRX091717)
tissue: skin psoriatic involveddisease state:. (skin)
SRR330892(SRX091730)
tissue: skin psoriatic uninvolveddisease stat. (skin)
SRR330903(SRX091741)
tissue: skin psoriatic uninvolveddisease stat. (skin)
SRR330871(SRX091709)
tissue: skin psoriatic involveddisease state:. (skin)
SRR330919(SRX091757)
tissue: normal skindisease state: normal. (skin)
SRR330894(SRX091732)
tissue: skin psoriatic uninvolveddisease stat. (skin)
SRR330915(SRX091753)
tissue: normal skindisease state: normal. (skin)
SRR330916(SRX091754)
tissue: normal skindisease state: normal. (skin)
SRR189777(GSM714637)
cell line: HEK293clip variant: PAR-CLIPenzyma. (cell line)
SRR342899(SRX096795)
small RNA seq of Left atrial tissue. (heart)
SRR330912(SRX091750)
tissue: normal skindisease state: normal. (skin)
SRR330857(SRX091695)
tissue: skin psoriatic involveddisease state:. (skin)
SRR189775(GSM714635)
cell line: HEK293clip variant: CLIPenzymatic . (cell line)
SRR330888(SRX091726)
tissue: skin psoriatic uninvolveddisease stat. (skin)
SRR330922(SRX091760)
tissue: normal skindisease state: normal. (skin)
SRR189782SRR330917(SRX091755)
tissue: normal skindisease state: normal. (skin)
SRR330901(SRX091739)
tissue: skin psoriatic uninvolveddisease stat. (skin)
SRR330874(SRX091712)
tissue: skin psoriatic involveddisease state:. (skin)
SRR330870(SRX091708)
tissue: skin psoriatic involveddisease state:. (skin)
SRR330902(SRX091740)
tissue: skin psoriatic uninvolveddisease stat. (skin)
SRR342897(SRX096793)
small RNA seq of Left atrial tissue. (heart)
SRR326280(GSM769510)
total cell content of unperturbed cells was s. (cell line)
SRR330876(SRX091714)
tissue: skin psoriatic involveddisease state:. (skin)
SRR189781(GSM714641)
cell line: HEK293clip variant: PAR-CLIPenzyma. (cell line)
GSM956925F181A(GSM956925)
"cell line: HEK293 cell linepassages: 15-20ip. (cell line)
...................................................CTTTGCATTGATTTTGAGC....................................................................................................................................................................................1927.000.00-----4.004.00----2.00-1.001.002.002.002.002.001.001.001.00-----1.00--1.00---1.00--1.00--
...................................................................................................................................................................................................................................CAAGGTGAATTGGATC.......1610.000.0010.00---------------------------------------
...................................................CTTTGCATTGATTTTGAGCA...................................................................................................................................................................................207.000.00-------------------1.00-1.00--1.00---1.00--1.001.001.00------
.................................................................................................................................................................................................................................ATCAAGGTGAATTGGC.........165.000.00----5.00-----------------------------------
....................................................TTTGCATTGATTTTGAGCAA..................................................................................................................................................................................203.000.00-------3.00--------------------------------
.................................................................TGACCTCAGTAGACATTAA......................................................................................................................................................................193.000.00---------3.00------------------------------
.............................................................................ACAATTACTACTATTAATTATTAATTATTAA..............................................................................................................................................312.000.00----------2.00-----------------------------
....................................................TTTGCATTGATTTTGAGC....................................................................................................................................................................................182.000.00-------------1.001.00-------------------------
.............................................................................ACAATTACTACTATTAATTATTATTAG..................................................................................................................................................271.000.00--------------------------1.00-------------
...................................................CTTTGCATTGATTTTGAGCAA..................................................................................................................................................................................211.000.00-------------------------1.00--------------
....................................................TTTGCATTGATTTTGAGCA...................................................................................................................................................................................191.000.00--------------------1.00-------------------
...................................................CTTTGCATTGATTTTGAACA...................................................................................................................................................................................201.000.00-----------------------------------1.00----
...............................................................................................................ACAGATATAAGACATAAATAATGTTAAATG.............................................................................................................301.000.00--------------------------------------1.00-
..................................................................................................................................AATGTTATAATGAAAGGGA.....................................................................................................191.000.00------------------------------------1.00---
..............................................................................................................................................................................................TACCCTTTAGAAGCGTATATG.......................................211.000.00-----------------------------1.00----------
.............................................................................ACAATTACTACTATTAATTATTAATTATTATTAG...........................................................................................................................................3411.001.00----------1.00-----------------------------
...................................................CTTTGCATTGATTTTGAAC....................................................................................................................................................................................191.000.00-----------------------1.00----------------
.............................................................................ACAATTACTACTATTAATTATTATCAG..................................................................................................................................................271.000.00----------------------1.00-----------------
.............................................................................ACAATTACTACTATTAATTATTATTAT..................................................................................................................................................271.000.00----------------------1.00-----------------

Antisense strand
TGTTGTTGTTTTTAATTTACTTTGGGAAAGCTTACCTCCTCACTCCATACCCTTTGCATTGATTTTGACCTCAGTAGACAATTACTACTATTAATTATTAATTATTATTAGACAGATATAAGACATAAATAATGTTATAATGAAAAAGCAAAATATTAATGGCAACATAACTTTTCCCCTGTAATTGATCTACCCTTTAGAAGCGTAAAAGATGTGTTGTTTTCAATCAAGGTGAATTGGATGCTATGGA
....................................................(((((...............(((((.......)))))............(((((((..((((..(((.........))).)))))))))))....)))))..................................................................................................
..................................................51...................................................................................................152................................................................................................
SizePerfect hitTotal NormPerfect NormSRR314796(SRX084354)
"Total RNA, fractionated (15-30nt)". (cell line)
SRR343336SRR343337SRR343335SRR387909(GSM843861)
specific-host: Homo sapienshost cell line: Su. (cell line)
SRR330923(SRX091761)
tissue: normal skindisease state: normal. (skin)
SRR330893(SRX091731)
tissue: skin psoriatic uninvolveddisease stat. (skin)
SRR330890(SRX091728)
tissue: skin psoriatic uninvolveddisease stat. (skin)
SRR189785SRR033726(GSM497071)
Mututated CLL (CLLM633). (B cell)
SRR189776(GSM714636)
cell line: HEK293clip variant: CLIPenzymatic . (cell line)
SRR330872(SRX091710)
tissue: skin psoriatic involveddisease state:. (skin)
SRR189784SRR330880(SRX091718)
tissue: skin psoriatic involveddisease state:. (skin)
SRR330879(SRX091717)
tissue: skin psoriatic involveddisease state:. (skin)
SRR330892(SRX091730)
tissue: skin psoriatic uninvolveddisease stat. (skin)
SRR330903(SRX091741)
tissue: skin psoriatic uninvolveddisease stat. (skin)
SRR330871(SRX091709)
tissue: skin psoriatic involveddisease state:. (skin)
SRR330919(SRX091757)
tissue: normal skindisease state: normal. (skin)
SRR330894(SRX091732)
tissue: skin psoriatic uninvolveddisease stat. (skin)
SRR330915(SRX091753)
tissue: normal skindisease state: normal. (skin)
SRR330916(SRX091754)
tissue: normal skindisease state: normal. (skin)
SRR189777(GSM714637)
cell line: HEK293clip variant: PAR-CLIPenzyma. (cell line)
SRR342899(SRX096795)
small RNA seq of Left atrial tissue. (heart)
SRR330912(SRX091750)
tissue: normal skindisease state: normal. (skin)
SRR330857(SRX091695)
tissue: skin psoriatic involveddisease state:. (skin)
SRR189775(GSM714635)
cell line: HEK293clip variant: CLIPenzymatic . (cell line)
SRR330888(SRX091726)
tissue: skin psoriatic uninvolveddisease stat. (skin)
SRR330922(SRX091760)
tissue: normal skindisease state: normal. (skin)
SRR189782SRR330917(SRX091755)
tissue: normal skindisease state: normal. (skin)
SRR330901(SRX091739)
tissue: skin psoriatic uninvolveddisease stat. (skin)
SRR330874(SRX091712)
tissue: skin psoriatic involveddisease state:. (skin)
SRR330870(SRX091708)
tissue: skin psoriatic involveddisease state:. (skin)
SRR330902(SRX091740)
tissue: skin psoriatic uninvolveddisease stat. (skin)
SRR342897(SRX096793)
small RNA seq of Left atrial tissue. (heart)
SRR326280(GSM769510)
total cell content of unperturbed cells was s. (cell line)
SRR330876(SRX091714)
tissue: skin psoriatic involveddisease state:. (skin)
SRR189781(GSM714641)
cell line: HEK293clip variant: PAR-CLIPenzyma. (cell line)
GSM956925F181A(GSM956925)
"cell line: HEK293 cell linepassages: 15-20ip. (cell line)
..........................................................................................................................................................................................................GCGTAAAAGATGTGTCATG............................. 1920.000.00-6.006.004.00----3.00---1.00---------------------------
...................................................................................................................................................................................................TTTAGAAGCGTAAAAT....................................... 161.000.00---1.00------------------------------------
...................................................................................................................................................................................................TTTAGAAGCGTAAAAGATG.................................... 191.000.00------------1.00---------------------------
.................................................................................................................................................................................................................................CCAATTCACCTTGAT.......... 1580.120.12---------------------------------------0.12