ID: uc002kkm.2_intron_4_0_chr18_335231_r.3p
GENE: (5)
chr18:335181-335430-


(1)
B-CELL 		(7)
BRAIN 		(11)
BREAST 		(4)
CELL-LINE 		(1)
FIBROBLAST 		(1)
HEART 		(1)
LIVER 		(6)
OTHER 		(3)
SKIN 		(1)
UTERUS

Sense strand
CTTCAGCATAAGAATTTGGAGGAGGACATAATTTAGCCCATAACAGTCTACAGTAGTATGATAAACAGATGGTCTTTCCCTGCTGTATATACTTTGTATGCTAGGTTTTTTTAATTTGGAGATTTTATAAGAAGAAAAATTATTCATAACTATCATTCACAGTGGATTTCATGTTGACACCTTTTTCTTTTATGCTTTAGGTCCACCGGGCCCCAGGGGTCCAAGAGGTGACAGAGGATCCCAGGGACCC
..............................................................................................((.(((.(((.......((((((.....(((.....)))...)))))).......))).))).))...........................................................................................
..............................................................................................95...............................................................................176........................................................................
SizePerfect hitTotal NormPerfect NormSRR189782TAX577744(Rovira)
total RNA. (breast)		SRR189780(GSM714640)
cell line: HEK293clip variant: PAR-CLIPenzyma. (cell line)		GSM450597(GSM450597)
miRNA sequencing raw reads from post-mortem s. (brain)		SRR189781(GSM714641)
cell line: HEK293clip variant: PAR-CLIPenzyma. (cell line)		TAX577740(Rovira)
total RNA. (breast)		TAX577743(Rovira)
total RNA. (breast)		SRR189784SRR189787GSM450609(GSM450609)
miRNA sequencing raw reads from post-mortem s. (brain)		TAX577590(Rovira)
total RNA. (breast)		GSM450608(GSM450608)
miRNA sequencing raw reads from post-mortem s. (brain)		TAX577589(Rovira)
total RNA. (breast)		TAX577580(Rovira)
total RNA. (breast)		TAX577588(Rovira)
total RNA. (breast)		SRR039625(GSM531988)
HBV(-) HCV(-) HCC Tissue Sample. (liver)		SRR037876(GSM522374)
fibroblasts_cell_culture. (fibroblast)		SRR207111(GSM721073)
Whole cell RNA. (cell line)		GSM450601(GSM450601)
miRNA sequencing raw reads from post-mortem s. (brain)		SRR330922(SRX091760)
tissue: normal skindisease state: normal. (skin)		SRR189785TAX577739(Rovira)
total RNA. (breast)		SRR094132(GSM651908)
small RNA(18-35nt)small RNA deep sequencing o. (uterus)		TAX577741(Rovira)
total RNA. (breast)		GSM450610(GSM450610)
miRNA sequencing raw reads from post-mortem s. (brain)		SRR189786GSM450600(GSM450600)
miRNA sequencing raw reads from post-mortem s. (brain)		SRR033728(GSM497073)
MALT (MALT413). (B cell)		TAX577738(Rovira)
total RNA. (breast)		TAX577453(Rovira)
total RNA. (breast)		GSM450605(GSM450605)
miRNA sequencing raw reads from post-mortem s. (brain)		SRR189778(GSM714638)
cell line: HEK293clip variant: PAR-CLIPenzyma. (cell line)		SRR342901(SRX096797)
small RNA seq of Left atrial tissue. (heart)		SRR330919(SRX091757)
tissue: normal skindisease state: normal. (skin)		SRR343335SRR330902(SRX091740)
tissue: skin psoriatic uninvolveddisease stat. (skin)
................................................TACAGTAGTATGATAACTGA......................................................................................................................................................................................2024.000.001.005.00-3.00-2.002.00--2.002.002.00-1.001.00-2.00----------1.00--------
................................................TACAGTAGTATGATAACTAA......................................................................................................................................................................................204.000.00------1.00-------1.00------1.00--1.00-----------
................................................TACAGTAGTATGATAAATGA......................................................................................................................................................................................203.000.00---1.00--------1.00--1.00--------------------
................................................TACAGTAGTATGATAACTG.......................................................................................................................................................................................192.000.002.00-----------------------------------
...........................................................................................................................................................TTCACAGTGGATTTCTG..............................................................................172.000.001.00------1.00----------------------------
................................................................................................................................................................................ACACCTTTTTCTTTTTTTG.......................................................192.000.00--2.00---------------------------------
................................................TACAGTAGTATGATAAATGAA.....................................................................................................................................................................................212.000.00---------------1.00----------1.00---------
................................................TACAGTAGTATGATAACTGG......................................................................................................................................................................................202.000.00------------------1.00----1.00------------
...........................................................................................................................................................TTCACAGTGGATTTCCTTT............................................................................191.000.001.00-----------------------------------
...................................................................................................GCTAGGTTTTTTTAAGCGA....................................................................................................................................191.000.00-------------------------------1.00----
................................................TACAGTAGTATGATAAACGCAC....................................................................................................................................................................................221.000.00--------1.00---------------------------
.........................................................................................................................................................................................................TCCACCGGGCCCCAGTTCT..............................191.000.00-----1.00------------------------------
................................................TACAGTAGTATGATAACTA.......................................................................................................................................................................................191.000.00-----------------1.00------------------
................................................TACAGTAGTATGATAACTGT......................................................................................................................................................................................201.000.00------------1.00-----------------------
...........................................................................................................................................................TTCACAGTGGATTTCGGT.............................................................................181.000.00--------1.00---------------------------
................................................TACAGTAGTATGATAAACGGAT....................................................................................................................................................................................221.000.00--------1.00---------------------------
................................................................................................................................................................................ACACCTTTTTCTTTTCCAG.......................................................191.000.00--1.00---------------------------------
........................................TAACAGTCTACAGTAATGG...............................................................................................................................................................................................191.000.00-----1.00------------------------------
................................................TACAGTAGTATGATAAGTG.......................................................................................................................................................................................191.000.00-------------1.00----------------------
................................................TACAGTAGTATGATAAGTGA......................................................................................................................................................................................201.000.00---------1.00--------------------------
................................................TACAGTAGTATGATAAATATT.....................................................................................................................................................................................211.000.00------------1.00-----------------------
..............................................................................................................................................................ACAGTGGATTTCATGGTC..........................................................................181.000.00-----------------------------1.00------
................................................TACAGTAGTATGATAACCGA......................................................................................................................................................................................201.000.00------------------------------1.00-----
................................................TACAGTAGTATGATAACT........................................................................................................................................................................................181.000.00----------------------1.00-------------
................................................TACAGTAGTATGATAAATG.......................................................................................................................................................................................191.000.00------1.00-----------------------------
................................................TACAGTAGTATGATAAGTGG......................................................................................................................................................................................201.000.00---1.00--------------------------------
................................................TACAGTAGTATGATAACCTT......................................................................................................................................................................................201.000.00-1.00----------------------------------
................................................................................................................................................................................ACACCTTTTTCTTTTTGAG.......................................................191.000.00--1.00---------------------------------
....................................................................................................................................................................................................................CCAGGGGTCCAAGAGG......................1620.500.50---------------------------------0.50--
......................................CATAACAGTCTACAGT....................................................................................................................................................................................................1620.500.50--------------------------------0.50---
.....................................................................................................................................................................................................................................GACAGAGGATCCCAGGG....1730.330.33-----------------------------------0.33

Antisense strand
CTTCAGCATAAGAATTTGGAGGAGGACATAATTTAGCCCATAACAGTCTACAGTAGTATGATAAACAGATGGTCTTTCCCTGCTGTATATACTTTGTATGCTAGGTTTTTTTAATTTGGAGATTTTATAAGAAGAAAAATTATTCATAACTATCATTCACAGTGGATTTCATGTTGACACCTTTTTCTTTTATGCTTTAGGTCCACCGGGCCCCAGGGGTCCAAGAGGTGACAGAGGATCCCAGGGACCC
..............................................................................................((.(((.(((.......((((((.....(((.....)))...)))))).......))).))).))...........................................................................................
..............................................................................................95...............................................................................176........................................................................
SizePerfect hitTotal NormPerfect NormSRR189782TAX577744(Rovira)
total RNA. (breast)		SRR189780(GSM714640)
cell line: HEK293clip variant: PAR-CLIPenzyma. (cell line)		GSM450597(GSM450597)
miRNA sequencing raw reads from post-mortem s. (brain)		SRR189781(GSM714641)
cell line: HEK293clip variant: PAR-CLIPenzyma. (cell line)		TAX577740(Rovira)
total RNA. (breast)		TAX577743(Rovira)
total RNA. (breast)		SRR189784SRR189787GSM450609(GSM450609)
miRNA sequencing raw reads from post-mortem s. (brain)		TAX577590(Rovira)
total RNA. (breast)		GSM450608(GSM450608)
miRNA sequencing raw reads from post-mortem s. (brain)		TAX577589(Rovira)
total RNA. (breast)		TAX577580(Rovira)
total RNA. (breast)		TAX577588(Rovira)
total RNA. (breast)		SRR039625(GSM531988)
HBV(-) HCV(-) HCC Tissue Sample. (liver)		SRR037876(GSM522374)
fibroblasts_cell_culture. (fibroblast)		SRR207111(GSM721073)
Whole cell RNA. (cell line)		GSM450601(GSM450601)
miRNA sequencing raw reads from post-mortem s. (brain)		SRR330922(SRX091760)
tissue: normal skindisease state: normal. (skin)		SRR189785TAX577739(Rovira)
total RNA. (breast)		SRR094132(GSM651908)
small RNA(18-35nt)small RNA deep sequencing o. (uterus)		TAX577741(Rovira)
total RNA. (breast)		GSM450610(GSM450610)
miRNA sequencing raw reads from post-mortem s. (brain)		SRR189786GSM450600(GSM450600)
miRNA sequencing raw reads from post-mortem s. (brain)		SRR033728(GSM497073)
MALT (MALT413). (B cell)		TAX577738(Rovira)
total RNA. (breast)		TAX577453(Rovira)
total RNA. (breast)		GSM450605(GSM450605)
miRNA sequencing raw reads from post-mortem s. (brain)		SRR189778(GSM714638)
cell line: HEK293clip variant: PAR-CLIPenzyma. (cell line)		SRR342901(SRX096797)
small RNA seq of Left atrial tissue. (heart)		SRR330919(SRX091757)
tissue: normal skindisease state: normal. (skin)		SRR343335SRR330902(SRX091740)
tissue: skin psoriatic uninvolveddisease stat. (skin)
..............................................................................................................................ATAAGAAGAAAAATTACATT........................................................................................................ 205.000.00----4.00---------------1.00---------------
......................................................................GGTCTTTCCCTGCTGTGG.................................................................................................................................................................. 181.000.00--1.00---------------------------------
.........................................................................................TACTTTGTATGCTAGGTGA.............................................................................................................................................. 191.000.00-----------1.00------------------------
..............................................................................................................................ATAAGAAGAAAAATTACATC........................................................................................................ 201.000.00----1.00-------------------------------
...................................................................................................................................................................................CCTTTTTCTTTTATGACTA.................................................... 191.000.00----------1.00-------------------------
..................................................................................................................................................................................................................CCCCAGGGGTCCAAGATG...................... 181.000.00-------1.00----------------------------
..................................................CAGTAGTATGATAAACTTC..................................................................................................................................................................................... 191.000.001.00-----------------------------------
...................AGGAGGACATAATTTGTA..................................................................................................................................................................................................................... 181.000.00-------------------1.00----------------
............................................................................TCCCTGCTGTATATACTTTGG......................................................................................................................................................... 211.000.00-------------------------1.00----------
.................................................................................................................ATTTGGAGATTTTATCTC....................................................................................................................... 181.000.00----------------------------1.00-------
......................................................................................................AGGTTTTTTTAATTTCAAG................................................................................................................................. 191.000.00-------1.00----------------------------
.........................................................................................................................................................AAATCCACTGTGAATG................................................................................. 1630.330.33----------------------------------0.33-