ID: uc002kdg.1
GENE: DCXR(6)
chr17:79994135-79994309-


(4)
AGO2.ip 		(4)
B-CELL 		(3)
BRAIN 		(16)
BREAST 		(22)
CELL-LINE 		(3)
HEART 		(4)
HELA 		(1)
KIDNEY 		(14)
LIVER 		(2)
OTHER 		(1)
RRP40.ip 		(11)
SKIN 		(1)
XRN.ip

Sense strand
CCCTGGACATGCTGACCAAGGTGATGGCCCTAGAGCTCGGGCCCCACAAGGTGAGCAGGGCTGGGGTACCTCCCCCAACCTAGGACACCCCACTTGCCCTGCTGACCCCAGCTGTCCCGGTGTAGATCCGAGTGAATGCAGTAAACCCCACAGTGGTGATGACGTCCATGGGCCA
..................................................((.((((((((((((((...(((.........))).))))))...)))))))).)).....................................................................
..................................................51..........................................................111..............................................................
SizePerfect hitTotal NormPerfect NormSRR039623(GSM531986)
HCV(+) HCC Tissue Sample. (liver)		SRR039622(GSM531985)
HCV(+) Adjacent Tissue Sample. (liver)		SRR039614(GSM531977)
HBV-infected Liver Tissue. (liver)		SRR387910(GSM843862)
antibody for ip: Ago2. (ago2 cell line)		DRR001486(DRX001040)
"Hela long cytoplasmic cell fraction, LNA(+)". (hela)		SRR039615(GSM531978)
Severe Chronic Hepatitis B Liver Tissue. (liver)		SRR039625(GSM531988)
HBV(-) HCV(-) HCC Tissue Sample. (liver)		SRR342899(SRX096795)
small RNA seq of Left atrial tissue. (heart)		SRR039611(GSM531974)
Human Normal Liver Tissue Sample 1. (liver)		SRR039620(GSM531983)
HBV(+) Adjacent Tissue Sample 2. (liver)		SRR207115(GSM721077)
XRN1&2 knockdown. (XRN1/XRN2 cell line)		SRR039613(GSM531976)
Human Normal Liver Tissue Sample 3. (liver)		SRR553572(SRX182778)
source: Frontal Cortex. (Frontal Cortex)		SRR189782SRR039612(GSM531975)
Human Normal Liver Tissue Sample 2. (liver)		SRR326280(GSM769510)
total cell content of unperturbed cells was s. (cell line)		SRR189787SRR039192(GSM494811)
K562 cell line is derived from a CML patient . (cell line)		SRR029125(GSM416754)
U2OS. (cell line)		RoviraIPAgo2(Rovira)
total RNA. (ago2 breast)		SRR553575(SRX182781)
source: Kidney. (Kidney)		SRR326279(GSM769509)
cytoplasmic fraction was isolated using PARIS. (cell line)		SRR037937(GSM510475)
293cand2. (cell line)		SRR039619(GSM531982)
HBV(+) HCC Tissue Sample 1. (liver)		SRR029054(GSM402329)
MCF7_smallRNAseq. (cell line)		SRR039617(GSM531980)
HBV(+) Adjacent Tissue Sample 1. (liver)		SRR330874(SRX091712)
tissue: skin psoriatic involveddisease state:. (skin)		DRR001489(DRX001043)
"Hela short nuclear cell fraction, control". (hela)		SRR189786SRR330894(SRX091732)
tissue: skin psoriatic uninvolveddisease stat. (skin)		SRR342895(SRX096791)
small RNA seq of Left atrial tissue. (heart)		SRR039624(GSM531987)
HBV(-) HCV(-) Adjacent Tissue Sample. (liver)		SRR033719(GSM497064)
6hr Activated B cell line (ABC158). (B cell)		SRR330880(SRX091718)
tissue: skin psoriatic involveddisease state:. (skin)		SRR039621(GSM531984)
HBV(+) HCC Tissue Sample 2. (liver)		SRR029124(GSM416753)
HeLa. (hela)		SRR037936(GSM510474)
293cand1. (cell line)		SRR191555(GSM715665)
195genomic small RNA (size selected RNA from . (breast)		SRR330879(SRX091717)
tissue: skin psoriatic involveddisease state:. (skin)		DRR000555(DRX000313)
"THP-1 whole cell RNA, no treatment". (cell line)		SRR330888(SRX091726)
tissue: skin psoriatic uninvolveddisease stat. (skin)		SRR330913(SRX091751)
tissue: normal skindisease state: normal. (skin)		SRR191613(GSM715723)
66genomic small RNA (size selected RNA from t. (breast)		SRR330906(SRX091744)
tissue: normal skindisease state: normal. (skin)		GSM450601(GSM450601)
miRNA sequencing raw reads from post-mortem s. (brain)		DRR000557(DRX000315)
"THP-1 whole cell RNA, after 3 day treatment . (cell line)		SRR207112(GSM721074)
RRP40 knockdown. (RRP40 cell line)		DRR000556(DRX000314)
"THP-1 whole cell RNA, after 3 day treatment . (cell line)		SRR191557(GSM715667)
57genomic small RNA (size selected RNA from t. (breast)		SRR039618(GSM531981)
HBV(+) Side Tissue Sample 1. (liver)		SRR191405(GSM715515)
55genomic small RNA (size selected RNA from t. (breast)		SRR553573(SRX182779)
source: Cerebellum. (Cerebellum)		SRR033716(GSM497061)
Mentle Cell Lymphoma (MCL114). (B cell)		SRR191406(GSM715516)
67genomic small RNA (size selected RNA from t. (breast)		SRR191610(GSM715720)
195genomic small RNA (size selected RNA from . (breast)		SRR038858(GSM458541)
MEL202. (cell line)		SRR330887(SRX091725)
tissue: skin psoriatic uninvolveddisease stat. (skin)		SRR033727(GSM497072)
HIV-positive DL (HIV412). (B cell)		TAX577739(Rovira)
total RNA. (breast)		SRR189779(GSM714639)
cell line: HEK293clip variant: PAR-CLIPenzyma. (cell line)		SRR015447(SRR015447)
nuclear small RNAs. (breast)		GSM339994(GSM339994)
hues6. (cell line)		GSM1105749AGO2(GSM1105749)
small RNA sequencing data. (ago2 hela)		SRR191617(GSM715727)
104genomic small RNA (size selected RNA from . (breast)		SRR037938(GSM510476)
293Red. (cell line)		SRR039193(GSM494812)
HL60 cell line is derived from acute promyelo. (cell line)		SRR033720(GSM497065)
EBV activated B cell line (EBV159). (B cell)		SRR015448(SRR015448)
cytoplasmic small RNAs. (breast)		SRR330868(SRX091706)
tissue: skin psoriatic involveddisease state:. (skin)		SRR342900(SRX096796)
small RNA seq of Right atrial tissue. (heart)		TAX577579(Rovira)
total RNA. (breast)		GSM956925Ago2(GSM956925)
"cell line: HEK293 cell linepassages: 15-20ip. (ago2 cell line)		SRR191414(GSM715524)
31genomic small RNA (size selected RNA from t. (breast)		GSM450602(GSM450602)
miRNA sequencing raw reads from post-mortem s. (brain)		SRR191591(GSM715701)
53genomic small RNA (size selected RNA from t. (breast)		TAX577738(Rovira)
total RNA. (breast)		SRR029131(GSM416760)
MCF7. (cell line)		SRR191572(GSM715682)
66genomic small RNA (size selected RNA from t. (breast)		GSM450597(GSM450597)
miRNA sequencing raw reads from post-mortem s. (brain)		SRR037944(GSM510482)
293DcrTN_cand5. (cell line)		SRR330895(SRX091733)
tissue: skin psoriatic uninvolveddisease stat. (skin)		SRR326281(GSM769511)
"Dicer mRNA was knocked down using siDicer, c. (cell line)		SRR330864(SRX091702)
tissue: skin psoriatic involveddisease state:. (skin)
....................................................................................ACACCCCACTTGCCCTGCTGACC....................................................................23126.0026.00---5.00--2.00------1.00-4.001.00-2.00-2.00-3.00----------------1.00-------------1.00-----------1.00------1.00------1.00-1.00-
.............GACCAAGGTGATGGCCCTAGAG............................................................................................................................................22123.0023.0015.005.002.00-----1.00--------------------------------------------------------------------------
.................AAGGTGATGGCCCTAGAG............................................................................................................................................18119.0019.009.006.003.00----------------------1.00---------------------------------------------------------
..................................................GTGAGCAGGGCTGGGGTACCTCCCCCAACCTAGGACACCCCACTTGCCCTGCTGACCCCAGCTGTCCCGGTGTAG..................................................75114.0014.00----14.00------------------------------------------------------------------------------
.............GACCAAGGTGATGGCCCTAGAGCT..........................................................................................................................................24111.0011.003.004.004.00--------------------------------------------------------------------------------
....................................................................................ACACCCCACTTGCCCTGCTGAC.....................................................................2219.009.00----------1.00-------1.00--1.00--2.00------------1.00------------1.00----------1.00--------1.00------------
.............GACCAAGGTGATGGCCCTAG..............................................................................................................................................2019.009.003.003.00-----1.00------2.00--------------------------------------------------------------------
.............GACCAAGGTGATGGCCCTA...............................................................................................................................................1918.008.005.00-1.00--------1.00--1.00--------------------------------------------------------------------
..................AGGTGATGGCCCTAGAGCTCGG.......................................................................................................................................2218.008.001.00-6.00----------------------1.00---------------------------------------------------------
..................AGGTGATGGCCCTAGAGCTCGGG......................................................................................................................................2318.008.001.00-5.00------1.00---------------------------------------------------------------1.00---------
..................AGGTGATGGCCCTAGAGCT..........................................................................................................................................1918.008.003.001.00---3.00---------------------------------------------------------------------1.00-------
..................................................GTGAGCAGGGCTGGGGTACC.........................................................................................................2018.008.00---8.00-------------------------------------------------------------------------------
................CAAGGTGATGGCCCTAGAG............................................................................................................................................1916.006.003.001.00-----------------------------2.00---------------------------------------------------
..............ACCAAGGTGATGGCCCTA...............................................................................................................................................1825.505.502.501.000.50------0.50-1.00-----------------------------------------------------------------------
...........CTGACCAAGGTGATGGCCCTAGAG............................................................................................................................................2415.005.00-2.003.00--------------------------------------------------------------------------------
...TGGACATGCTGACCAAGGTGATGG....................................................................................................................................................2415.005.00-2.00------1.00-----1.00-------------------1.00------------------------------------------------
..................AGGTGATGGCCCTAGAGCTCG........................................................................................................................................2115.005.001.00-3.00------1.00-------------------------------------------------------------------------
..........................................................................................................................................................GGTGATGACGTCCATGGG...1814.004.004.00----------------------------------------------------------------------------------
........................................................AGGGCTGGGGTACCTCCCCCAACCTAGGACACCCCACTTGCCCTGCTGACCCCAGCTGTCCCGGTGTAGATCCGAGTGAATGCAGTAAACCCCACAG......................9714.004.00----4.00------------------------------------------------------------------------------
.................AAGGTGATGGCCCTAGAGCT..........................................................................................................................................2014.004.00-1.001.00--2.00-----------------------------------------------------------------------------
.................AAGGTGATGGCCCTAGAGC...........................................................................................................................................1914.004.002.001.001.00--------------------------------------------------------------------------------
.............GACCAAGGTGATGGCCCTAGAGC...........................................................................................................................................2314.004.001.002.001.00--------------------------------------------------------------------------------
...TGGACATGCTGACCAAGGTGATGGCCCTAG..............................................................................................................................................3014.004.00-1.00-------------------------2.00--1.00----------------------------------------------------
..................................................GTGAGCAGGGCTGGGGTAC..........................................................................................................1914.004.00---3.00---------------------------------------------------1.00---------------------------
....................................................................................ACACCCCACTTGCCCTGCTGACT....................................................................2313.009.00---3.00-------------------------------------------------------------------------------
..............ACCAAGGTGATGGCCCTAGAG............................................................................................................................................2113.003.001.00-2.00--------------------------------------------------------------------------------
..................................................GTGAGCAGGGCTGGGGTACCTC.......................................................................................................2213.003.00---3.00-------------------------------------------------------------------------------
....................................................................................ACACCCCACTTGCCCTGCTGA......................................................................2113.003.00-------------1.00----------------------------1.00-------------------------------1.00--------
...................................................TGAGCAGGGCTGGGGTACC.........................................................................................................1913.003.00-----3.00-----------------------------------------------------------------------------
...TGGACATGCTGACCAAGGTGATG.....................................................................................................................................................2313.003.001.001.00---------------1.00-----------------------------------------------------------------
..........GCTGACCAAGGTGATGGCCCTAGAG............................................................................................................................................2513.003.001.002.00---------------------------------------------------------------------------------
..................................................GTGAGCAGGGCTGGGGTACCTCT......................................................................................................2313.003.00---2.00---------1.00---------------------------------------------------------------------
....................................................................................ACACCCCACTTGCCCTGCTGACA....................................................................2313.009.00------1.00----------------1.00---------1.00-------------------------------------------------
...................................................................................GACACCCCACTTGCCCTGCTGA......................................................................2213.003.00----------------1.00----2.00-------------------------------------------------------------
....................................................................................ACACCCCACTTGCCCTGCTGACCC...................................................................2413.003.00------1.00--------1.001.00------------------------------------------------------------------
...................................................TGAGCAGGGCTGGGGTACCTCC......................................................................................................2213.003.00---2.00-------------1.00-----------------------------------------------------------------
..................................................GTGAGCAGGGCTGGGGTAAA.........................................................................................................202.000.00--------------------------------1.00---------------------------------1.00----------------
..............................................................................................................GCTGTCCCGGTGTAGATG...............................................182.000.00----------2.00------------------------------------------------------------------------
..................................................GTGAGCAGGGCTGGGGTACCT........................................................................................................2112.002.00---2.00-------------------------------------------------------------------------------
..................AGGTGATGGCCCTAGAGC...........................................................................................................................................1812.002.002.00----------------------------------------------------------------------------------
....................................................................................ACACCCCACTTGCCCTGCTGAAAA...................................................................2412.003.00----------------------------------------------------------------------------1.001.00-----
...............CCAAGGTGATGGCCCTAGAG............................................................................................................................................2012.002.00-----------------------2.00-----------------------------------------------------------
..............................TAGAGCTCGGGCCCCACAAGATA..........................................................................................................................232.000.00------2.00----------------------------------------------------------------------------
....................................................................................ACACCCCACTTGCCCTGCTGACCA...................................................................2412.0026.00------1.00-------------------------------------------------------------1.00--------------
............................................................................................................................GATCCGAGTGAATGCAGTAA...............................2012.002.00--2.00--------------------------------------------------------------------------------
........ATGCTGACCAAGGTGATGGCCCTAGAG............................................................................................................................................2712.002.00---------1.00----1.00--------------------------------------------------------------------
..............ACCAAGGTGATGGCCCTAGAGC...........................................................................................................................................2212.002.00--2.00--------------------------------------------------------------------------------
.................................................................................................................................GAGTGAATGCAGTAAACC............................1812.002.002.00----------------------------------------------------------------------------------
..................................................................................................................TCCCGGTGTAGATCCGAGTGAAT......................................2312.002.00----------2.00------------------------------------------------------------------------
.................AAGGTGATGGCCCTAGAGCTCG........................................................................................................................................2212.002.002.00----------------------------------------------------------------------------------
..............ACCAAGGTGATGGCCCTAG..............................................................................................................................................1912.002.00-1.00----------------------------1.00----------------------------------------------------
................CAAGGTGATGGCCCTAGAGCTCGG.......................................................................................................................................2412.002.00--------2.00--------------------------------------------------------------------------
.........TGCTGACCAAGGTGATGGCCCTAGAG............................................................................................................................................2612.002.002.00----------------------------------------------------------------------------------
.................AAGGTGATGGCCCTAGAGCTCGGG......................................................................................................................................2412.002.00-----2.00-----------------------------------------------------------------------------
..................AGGTGATGGCCCTAGAGCTC.........................................................................................................................................2012.002.002.00----------------------------------------------------------------------------------
...TGGACATGCTGACCAAGGTGATGGCCCT................................................................................................................................................2812.002.001.00-------1.00--------------------------------------------------------------------------
................................................................................................................................CGAGTGAATGCAGTAAACCCCA.........................2212.002.002.00----------------------------------------------------------------------------------
............TGACCAAGGTGATGGCCCTAGAGCT..........................................................................................................................................2512.002.00--2.00--------------------------------------------------------------------------------
....GGACATGCTGACCAAGGTGATGGCCCTAG..............................................................................................................................................2912.002.00-------2.00---------------------------------------------------------------------------
.................AAGGTGATGGCCCTAGAGCTC.........................................................................................................................................2112.002.001.001.00---------------------------------------------------------------------------------
...TGGACATGCTGACCAAGGTGA.......................................................................................................................................................2112.002.001.00--------1.00-------------------------------------------------------------------------
..................................................GTGAGCAGGGCTGGGGTACCTCC......................................................................................................2312.002.00-------------1.00------------------------------------------------1.00--------------------
...................................................................................GACACCCCACTTGCCCTGCTGACC....................................................................2412.002.00---------------------------------------------1.00--------------1.00----------------------
...TGGACATGCTGACCAAGGTG........................................................................................................................................................2012.002.00-------1.00---------------------------------------1.00-----------------------------------
.....GACATGCTGACCAAGGTGATGGCC..................................................................................................................................................2411.001.00-------1.00---------------------------------------------------------------------------
....................................................................................ACACCCCACTTGCCCTGCTGAA.....................................................................2211.003.00------------------------------------------------------1.00----------------------------
.........................................................................................................................GTAGATCCGAGTGAATGCAGTAAACCCCAC........................3011.001.00--------------------------------------------------------1.00--------------------------
......ACATGCTGACCAAGGTGATGGCCCTAG..............................................................................................................................................2711.001.00-------1.00---------------------------------------------------------------------------
..............................................................................................................................TCCGAGTGAATGCAGTAAAC.............................2011.001.00---------1.00-------------------------------------------------------------------------
.............GACCAAGGTGATGGCCCTAGA.............................................................................................................................................2111.001.001.00----------------------------------------------------------------------------------
.........TGCTGACCAAGGTGATGGCCCT................................................................................................................................................2211.001.00-1.00---------------------------------------------------------------------------------
....................................................................................ACACCCCACTTGCCCTGCTGACCCA..................................................................2511.003.00------------------------------------1.00----------------------------------------------
.............................CTAGAGCTCGGGCCCCACA...............................................................................................................................1911.001.001.00----------------------------------------------------------------------------------
..........................................................................................................................................................GGTGATGACGTCCATGGGCCA2111.001.00-----------------1.00-----------------------------------------------------------------
..........GCTGACCAAGGTGATGGCCCTAGA.............................................................................................................................................2411.001.00-1.00---------------------------------------------------------------------------------
...................................................................................GACACCCCACTTGCCCTGCTGACCC...................................................................2511.001.00------------------------------------------------1.00----------------------------------
.........TGCTGACCAAGGTGATGGCCCTAGAGCT..........................................................................................................................................2811.001.001.00----------------------------------------------------------------------------------
...........CTGACCAAGGTGATGGCCCTAGAGC...........................................................................................................................................2511.001.001.00----------------------------------------------------------------------------------
......................................................................................................................................................CAGTGGTGATGACGTCCATGGT...221.000.00-----------------------------------------------------------------------1.00-----------
....................................................................................ACACCCCACTTGCCCTGCTGACCCCT.................................................................2611.001.00----------------------------1.00------------------------------------------------------
.................................................................................................................................................CCCCACAGTGGTGATGACG...........1911.001.00--------------------------------------------------------------------------------1.00--
..................................................GTGAGCAGGGCTGGGGTACCTCCCCC...................................................................................................2611.001.00----------------------------------------------------------1.00------------------------
.............................................................................................................................ATCCGAGTGAATGCAGTAAACCCCACA.......................2711.001.00--------------------------------------1.00--------------------------------------------
.CCTGGACATGCTGACCAAGGT.........................................................................................................................................................2111.001.00-----------------1.00-----------------------------------------------------------------
...........................................................................................................................................AGTAAACCCCACAGTGGTGATGACG...........2511.001.00-----------1.00-----------------------------------------------------------------------
......................GATGGCCCTAGAGCTCGGG......................................................................................................................................1911.001.00------------1.00----------------------------------------------------------------------
...TGGACATGCTGACCAGGC..........................................................................................................................................................181.000.00-----------------------------------------1.00-----------------------------------------
...............................................................................................................................................AACCCCACAGTGGTGATGACGTCCAT......2611.001.00-1.00---------------------------------------------------------------------------------
.................................................................................................................................GAGTGAATGCAGTAAACCCCA.........................2111.001.00-1.00---------------------------------------------------------------------------------
..........................................................................................................................TAGATCCGAGTGAATGCAG..................................1911.001.00--------------------------1.00--------------------------------------------------------
..............ACCAAGGTGATGGCCCTAGA.............................................................................................................................................2011.001.00--------1.00--------------------------------------------------------------------------
.......................................................................CCCCCAACCTAGGACACCC.....................................................................................1911.001.00------------1.00----------------------------------------------------------------------
.......................................................................................................................................ATGCAGTAAACCCCACAGTGGTGAT...............2511.001.00-1.00---------------------------------------------------------------------------------
.........TGCTGACCAAGGTGATGGCCCTAGAGC...........................................................................................................................................2711.001.00-1.00---------------------------------------------------------------------------------
............TGACCAAGGTGATGGCCCTAGAGC...........................................................................................................................................2411.001.00---------1.00-------------------------------------------------------------------------
..............................TAGAGCTCGGGCCCCACAAGATCC.........................................................................................................................241.000.00--1.00--------------------------------------------------------------------------------
...........................................................................................................................AGATCCGAGTGAATGCAGTAAACCCG..........................261.000.00-----------1.00-----------------------------------------------------------------------
.......................................................................................................................GTGTAGATCCGAGTGAATG.....................................1911.001.00----------1.00------------------------------------------------------------------------
...............................................................................................................................CCGAGTGAATGCAGTAAACCCCA.........................2311.001.001.00----------------------------------------------------------------------------------
...................................................TGAGCAGGGCTGGGGTACCTCCA.....................................................................................................2311.003.00---------------------------------------------------------------1.00-------------------
..................AGGTGATGGCCCTAGAGATCG........................................................................................................................................211.000.00--1.00--------------------------------------------------------------------------------
...........................................................................................................................................AGTAAACCCCACAGTGGTGATGAGG...........2511.001.00-----------1.00-----------------------------------------------------------------------
................CAAGGTGATGGCCCTAGAGC...........................................................................................................................................2011.001.001.00----------------------------------------------------------------------------------
..CTGGACATGCTGACCAAGGTGATGGC...................................................................................................................................................2611.001.00-------------------1.00---------------------------------------------------------------
........ATGCTGACCAAGGTGATGGCCC.................................................................................................................................................2211.001.001.00----------------------------------------------------------------------------------
...................................................................................GACACCCCACTTGCCCTGCTTACT....................................................................241.000.00-------------------1.00---------------------------------------------------------------
....................................................................................ACACCCCACTTGCCCTGCTGATA....................................................................2311.003.00------1.00----------------------------------------------------------------------------
.....................................................................................................................CGGTGTAGATCCGAGTGAATGTAGT.................................251.000.00--------------------------------------------1.00--------------------------------------
.........................................................................................................CCCCAGCTGTCCCGGGGC....................................................181.000.00-------------------------------------------1.00---------------------------------------
...TGGACATGCTGACCAAGGTGATGGC...................................................................................................................................................2511.001.00---------------------------------------------------------1.00-------------------------
................................................................................................................................CGAGTGAATGCAGTAAACCCC..........................2111.001.001.00----------------------------------------------------------------------------------
..................................................GTGAGCAGGGCTGGGGTACCTCCCCCAACCTAGGACACCCCACTTGCCCTGCTGACCCCAGCTGTCCCGGTGCAG..................................................751.000.00----1.00------------------------------------------------------------------------------
....................................................................................ACACCCCACTTGCCCTGCTGACCCT..................................................................2511.003.00----------------------------------------------------------------1.00------------------
.............................CTAGAGCTCGGGCCCCACAAG.............................................................................................................................2111.001.00------------1.00----------------------------------------------------------------------
..................................................GTGAGCAGGGCTGGGGTACCCCC......................................................................................................2311.008.00----------------------------1.00------------------------------------------------------
...........................................................................................................................................AGTAAACCCCACAGTGGTGATGA.............2311.001.001.00----------------------------------------------------------------------------------
..............................TAGAGCTCGGGCCCC..................................................................................................................................1511.001.00--------------------1.00--------------------------------------------------------------
....................................................................................ACACCCCACTTGCCCTGCTG.......................................................................2011.001.00----------------------------------------------1.00------------------------------------
...............................AGAGCTCGGGCCCCACAAGATA..........................................................................................................................221.000.001.00----------------------------------------------------------------------------------
.............GACCAAGGTGATGGCCCT................................................................................................................................................1811.001.00-1.00---------------------------------------------------------------------------------
....................................................................................ACACCCCACTTGCCCTGCTGACCT...................................................................2411.0026.00-------------1.00---------------------------------------------------------------------
.........TGCTGACCAAGGTGATGGCCCTAG..............................................................................................................................................2411.001.001.00----------------------------------------------------------------------------------
...........CTGACCAAGGTGATGGCCC.................................................................................................................................................1911.001.001.00----------------------------------------------------------------------------------
.......................................................................................................................................................AGTGGTGATGACGTCCATGGGCCA2411.001.00-----------1.00-----------------------------------------------------------------------
...................................................TGAGCAGGGCTGGGGTACCCCCC.....................................................................................................2311.003.00----------------1.00------------------------------------------------------------------
.................................................................................................................................GAGTGAATGCAGTAAACCCC..........................2011.001.00---------------------------------------------------------------------1.00-------------
............TGACCAAGGTGATGGCCCTAGAG............................................................................................................................................2311.001.00--------1.00--------------------------------------------------------------------------
.............GACCAAGGTGATGGCCCTAGAGCTC.........................................................................................................................................2511.001.00--------1.00--------------------------------------------------------------------------
..CTGGACATGCTGACCAAGGTGATGGCC..................................................................................................................................................2711.001.00-1.00---------------------------------------------------------------------------------
...................................................................................GACACCCCACTTGCCCTGCTGACT....................................................................241.000.00-------------------1.00---------------------------------------------------------------
....................................................................................ACACCCCACTTGCCCTGCTGAAAT...................................................................2411.003.00------------------1.00----------------------------------------------------------------
.........TGCTGACCAAGGTGATGGCCCTGG..............................................................................................................................................2411.001.00-------1.00---------------------------------------------------------------------------
..........................................................................................CACTTGCCCTGCTGAGCAG..................................................................191.000.00----------------------------------------1.00------------------------------------------
..................................................GTGAGCAGGGCTGGGGTACCTCA......................................................................................................2311.003.00----------------------------------------------------1.00------------------------------
................................................................................TAGGACACCCCACTTGCCCTGCTG.......................................................................2411.001.00------------1.00----------------------------------------------------------------------
...................GGTGATGGCCCTAGAGCTCGGGC.....................................................................................................................................2311.001.00--1.00--------------------------------------------------------------------------------
...............................................................................................................................................AACCCCACAGTGGTGATGACGT..........2211.001.001.00----------------------------------------------------------------------------------
....................................................................................ACACCCCACTTGCCCTGCTGACCCC..................................................................2511.001.00-----------------------------1.00-----------------------------------------------------
........................................................................................................ACCCCAGCTGTCCCGGTGTAGATC...............................................2411.001.00----------1.00------------------------------------------------------------------------
....................................................................................ACACCCCACTTGCCCTGCTGACTC...................................................................2411.009.00------1.00----------------------------------------------------------------------------
....GGACATGCTGACCAAGGTGATGGC...................................................................................................................................................2411.001.001.00----------------------------------------------------------------------------------
......ACATGCTGACCAAGGTGATGGC...................................................................................................................................................2211.001.00-------1.00---------------------------------------------------------------------------
........ATGCTGACCAAGGTGATGG....................................................................................................................................................1911.001.00-------------------------------------------------1.00---------------------------------
...................GGTGATGGCCCTAGAGCTCG........................................................................................................................................2011.001.00-----------------------------------1.00-----------------------------------------------
....................GTGATGGCCCTAGAGCTCGG.......................................................................................................................................2011.001.00-----------------------------1.00-----------------------------------------------------
..................AGGTGATGGCCCTAGAGCTCGGGAA....................................................................................................................................2511.008.00-----------1.00-----------------------------------------------------------------------
....................GTGATGGCCCTAGAGGACG........................................................................................................................................191.000.00------------1.00----------------------------------------------------------------------
....................................................................................ACACCCCACTTGCCCTGCTTACC....................................................................231.000.00---------------------------------------------------1.00-------------------------------
..............................................................................................................................TCCGAGTGAATGCAGTAAACC............................2111.001.00---------1.00-------------------------------------------------------------------------
...TGGACATGCTGACCAAGGTGATGGCCCTAGAGCT..........................................................................................................................................3411.001.00------------1.00----------------------------------------------------------------------
......ACATGCTGACCAAGGTGATGG....................................................................................................................................................2111.001.00--------------------------1.00--------------------------------------------------------
....................................................GAGCAGGGCTGGGGTACCT........................................................................................................1920.500.50-------------0.50---------------------------------------------------------------------

Antisense strand
CCCTGGACATGCTGACCAAGGTGATGGCCCTAGAGCTCGGGCCCCACAAGGTGAGCAGGGCTGGGGTACCTCCCCCAACCTAGGACACCCCACTTGCCCTGCTGACCCCAGCTGTCCCGGTGTAGATCCGAGTGAATGCAGTAAACCCCACAGTGGTGATGACGTCCATGGGCCA
..................................................((.((((((((((((((...(((.........))).))))))...)))))))).)).....................................................................
..................................................51..........................................................111..............................................................
SizePerfect hitTotal NormPerfect NormSRR039623(GSM531986)
HCV(+) HCC Tissue Sample. (liver)		SRR039622(GSM531985)
HCV(+) Adjacent Tissue Sample. (liver)		SRR039614(GSM531977)
HBV-infected Liver Tissue. (liver)		SRR387910(GSM843862)
antibody for ip: Ago2. (ago2 cell line)		DRR001486(DRX001040)
"Hela long cytoplasmic cell fraction, LNA(+)". (hela)		SRR039615(GSM531978)
Severe Chronic Hepatitis B Liver Tissue. (liver)		SRR039625(GSM531988)
HBV(-) HCV(-) HCC Tissue Sample. (liver)		SRR342899(SRX096795)
small RNA seq of Left atrial tissue. (heart)		SRR039611(GSM531974)
Human Normal Liver Tissue Sample 1. (liver)		SRR039620(GSM531983)
HBV(+) Adjacent Tissue Sample 2. (liver)		SRR207115(GSM721077)
XRN1&2 knockdown. (XRN1/XRN2 cell line)		SRR039613(GSM531976)
Human Normal Liver Tissue Sample 3. (liver)		SRR553572(SRX182778)
source: Frontal Cortex. (Frontal Cortex)		SRR189782SRR039612(GSM531975)
Human Normal Liver Tissue Sample 2. (liver)		SRR326280(GSM769510)
total cell content of unperturbed cells was s. (cell line)		SRR189787SRR039192(GSM494811)
K562 cell line is derived from a CML patient . (cell line)		SRR029125(GSM416754)
U2OS. (cell line)		RoviraIPAgo2(Rovira)
total RNA. (ago2 breast)		SRR553575(SRX182781)
source: Kidney. (Kidney)		SRR326279(GSM769509)
cytoplasmic fraction was isolated using PARIS. (cell line)		SRR037937(GSM510475)
293cand2. (cell line)		SRR039619(GSM531982)
HBV(+) HCC Tissue Sample 1. (liver)		SRR029054(GSM402329)
MCF7_smallRNAseq. (cell line)		SRR039617(GSM531980)
HBV(+) Adjacent Tissue Sample 1. (liver)		SRR330874(SRX091712)
tissue: skin psoriatic involveddisease state:. (skin)		DRR001489(DRX001043)
"Hela short nuclear cell fraction, control". (hela)		SRR189786SRR330894(SRX091732)
tissue: skin psoriatic uninvolveddisease stat. (skin)		SRR342895(SRX096791)
small RNA seq of Left atrial tissue. (heart)		SRR039624(GSM531987)
HBV(-) HCV(-) Adjacent Tissue Sample. (liver)		SRR033719(GSM497064)
6hr Activated B cell line (ABC158). (B cell)		SRR330880(SRX091718)
tissue: skin psoriatic involveddisease state:. (skin)		SRR039621(GSM531984)
HBV(+) HCC Tissue Sample 2. (liver)		SRR029124(GSM416753)
HeLa. (hela)		SRR037936(GSM510474)
293cand1. (cell line)		SRR191555(GSM715665)
195genomic small RNA (size selected RNA from . (breast)		SRR330879(SRX091717)
tissue: skin psoriatic involveddisease state:. (skin)		DRR000555(DRX000313)
"THP-1 whole cell RNA, no treatment". (cell line)		SRR330888(SRX091726)
tissue: skin psoriatic uninvolveddisease stat. (skin)		SRR330913(SRX091751)
tissue: normal skindisease state: normal. (skin)		SRR191613(GSM715723)
66genomic small RNA (size selected RNA from t. (breast)		SRR330906(SRX091744)
tissue: normal skindisease state: normal. (skin)		GSM450601(GSM450601)
miRNA sequencing raw reads from post-mortem s. (brain)		DRR000557(DRX000315)
"THP-1 whole cell RNA, after 3 day treatment . (cell line)		SRR207112(GSM721074)
RRP40 knockdown. (RRP40 cell line)		DRR000556(DRX000314)
"THP-1 whole cell RNA, after 3 day treatment . (cell line)		SRR191557(GSM715667)
57genomic small RNA (size selected RNA from t. (breast)		SRR039618(GSM531981)
HBV(+) Side Tissue Sample 1. (liver)		SRR191405(GSM715515)
55genomic small RNA (size selected RNA from t. (breast)		SRR553573(SRX182779)
source: Cerebellum. (Cerebellum)		SRR033716(GSM497061)
Mentle Cell Lymphoma (MCL114). (B cell)		SRR191406(GSM715516)
67genomic small RNA (size selected RNA from t. (breast)		SRR191610(GSM715720)
195genomic small RNA (size selected RNA from . (breast)		SRR038858(GSM458541)
MEL202. (cell line)		SRR330887(SRX091725)
tissue: skin psoriatic uninvolveddisease stat. (skin)		SRR033727(GSM497072)
HIV-positive DL (HIV412). (B cell)		TAX577739(Rovira)
total RNA. (breast)		SRR189779(GSM714639)
cell line: HEK293clip variant: PAR-CLIPenzyma. (cell line)		SRR015447(SRR015447)
nuclear small RNAs. (breast)		GSM339994(GSM339994)
hues6. (cell line)		GSM1105749AGO2(GSM1105749)
small RNA sequencing data. (ago2 hela)		SRR191617(GSM715727)
104genomic small RNA (size selected RNA from . (breast)		SRR037938(GSM510476)
293Red. (cell line)		SRR039193(GSM494812)
HL60 cell line is derived from acute promyelo. (cell line)		SRR033720(GSM497065)
EBV activated B cell line (EBV159). (B cell)		SRR015448(SRR015448)
cytoplasmic small RNAs. (breast)		SRR330868(SRX091706)
tissue: skin psoriatic involveddisease state:. (skin)		SRR342900(SRX096796)
small RNA seq of Right atrial tissue. (heart)		TAX577579(Rovira)
total RNA. (breast)		GSM956925Ago2(GSM956925)
"cell line: HEK293 cell linepassages: 15-20ip. (ago2 cell line)		SRR191414(GSM715524)
31genomic small RNA (size selected RNA from t. (breast)		GSM450602(GSM450602)
miRNA sequencing raw reads from post-mortem s. (brain)		SRR191591(GSM715701)
53genomic small RNA (size selected RNA from t. (breast)		TAX577738(Rovira)
total RNA. (breast)		SRR029131(GSM416760)
MCF7. (cell line)		SRR191572(GSM715682)
66genomic small RNA (size selected RNA from t. (breast)		GSM450597(GSM450597)
miRNA sequencing raw reads from post-mortem s. (brain)		SRR037944(GSM510482)
293DcrTN_cand5. (cell line)		SRR330895(SRX091733)
tissue: skin psoriatic uninvolveddisease stat. (skin)		SRR326281(GSM769511)
"Dicer mRNA was knocked down using siDicer, c. (cell line)		SRR330864(SRX091702)
tissue: skin psoriatic involveddisease state:. (skin)
...............................................................................................GCCCTGCTGACCCCAGCTTCTG.......................................................... 221.000.00-----------------------------------------------------------1.00-----------------------
............................................................CTGGGGTACCTCCCCTGG................................................................................................. 181.000.00------------------------------------------------------------------------------1.00----
.......................................................................................................CGGGACAGCTGGGGTC........................................................ 1630.330.33----------------------------------------------------------------------------------0.33