uc002jzz.1_intron_14_0_chr17_79263609

GCTTCATCCCTGGACAAGGCGCGCGGCCACCACAGCAAGGAAATGGCCCTTTCAGTGCTAGGAAGTGTCGCGTTCGGCAGGAGACTGGGATGGAGCGGGGCCTGGGGGTGAAGAGGGTCCTCATGAGCCGCGTGTGTGGGGTGAGGGCCTCTGGGGAGCACCTGCTGCTGTGAACATGTGTTCCTGTCTCCACCCTGCAGTGCGGCATCGTCCTGGGGGCGCTGCTCTTGGTCTTCTGCTCATGGATGAC
.........................................................................................................................................((((((..(((.....((((((((.((..........)).)))))))))))..))))))......................................................
........................................................................................................................................137............................................................200................................................

Size

Perfect hit

Total Norm

Perfect Norm

SRR207113(GSM721075)
IP against AGO 1 & 2. (ago1/2 cell line)

SRR207114(GSM721076)
"IP against AGO 1 & 2, RRP40 knockdown". (ago1/2 RRP40 cell line)

SRR326279(GSM769509)
cytoplasmic fraction was isolated using PARIS. (cell line)

SRR207116(GSM721078)
Nuclear RNA. (cell line)

SRR189782

SRR037944(GSM510482)
293DcrTN_cand5. (cell line)

DRR000555(DRX000313)
"THP-1 whole cell RNA, no treatment". (cell line)

DRR000557(DRX000315)
"THP-1 whole cell RNA, after 3 day treatment . (cell line)

SRR387910(GSM843862)
antibody for ip: Ago2. (ago2 cell line)

SRR387909(GSM843861)
specific-host: Homo sapienshost cell line: Su. (cell line)

SRR207115(GSM721077)
XRN1&2 knockdown. (XRN1/XRN2 cell line)

SRR207110(GSM721072)
Nuclear RNA. (cell line)

SRR553575(SRX182781)
source: Kidney. (Kidney)

SRR342899(SRX096795)
small RNA seq of Left atrial tissue. (heart)

SRR330921(SRX091759)
tissue: normal skindisease state: normal. (skin)

SRR330908(SRX091746)
tissue: normal skindisease state: normal. (skin)

DRR000561(DRX000319)
Isolation of RNA following immunoprecipitatio. (ago2 cell line)

SRR037935(GSM510473)
293cand3. (cell line)

SRR033722(GSM497067)
KMS12 cell line (KMS12). (B cell)

SRR039625(GSM531988)
HBV(-) HCV(-) HCC Tissue Sample. (liver)

TAX577746(Rovira)
total RNA. (breast)

GSM450604(GSM450604)
miRNA sequencing raw reads from post-mortem s. (brain)

SRR191592(GSM715702)
59genomic small RNA (size selected RNA from t. (breast)

SRR553573(SRX182779)
source: Cerebellum. (Cerebellum)

SRR330896(SRX091734)
tissue: skin psoriatic uninvolveddisease stat. (skin)

DRR001489(DRX001043)
"Hela short nuclear cell fraction, control". (hela)

GSM450602(GSM450602)
miRNA sequencing raw reads from post-mortem s. (brain)

SRR330915(SRX091753)
tissue: normal skindisease state: normal. (skin)

DRR000560(DRX000318)
Isolation of RNA following immunoprecipitatio. (ago1 cell line)

SRR037933(GSM510471)
293cand4_rep2. (cell line)

RoviraIPAgo2(Rovira)
total RNA. (ago2 breast)

SRR191528(GSM715638)
130genomic small RNA (size selected RNA from . (breast)

SRR330905(SRX091743)
tissue: normal skindisease state: normal. (skin)

SRR037936(GSM510474)
293cand1. (cell line)

SRR060983(GSM569187)
Human pre-germinal center B cell [09-001]. (cell line)

SRR039191(GSM494810)
PBMCs were isolated by ficoll gradient from t. (blood)

DRR000562(DRX000320)
Isolation of RNA following immunoprecipitatio. (ago3 cell line)

SRR330913(SRX091751)
tissue: normal skindisease state: normal. (skin)

SRR553572(SRX182778)
source: Frontal Cortex. (Frontal Cortex)

SRR330906(SRX091744)
tissue: normal skindisease state: normal. (skin)

DRR000556(DRX000314)
"THP-1 whole cell RNA, after 3 day treatment . (cell line)

SRR330903(SRX091741)
tissue: skin psoriatic uninvolveddisease stat. (skin)

SRR037943(GSM510481)
293DcrTN. (cell line)

GSM450609(GSM450609)
miRNA sequencing raw reads from post-mortem s. (brain)

GSM416733(GSM416733)
HEK293. (cell line)

SRR330923(SRX091761)
tissue: normal skindisease state: normal. (skin)

SRR029128(GSM416757)
H520. (cell line)

SRR037931(GSM510469)
293GFP. (cell line)

SRR060982(GSM569186)
Human centrocyte [09-001]. (cell line)

GSM450603(GSM450603)
miRNA sequencing raw reads from post-mortem s. (brain)

SRR094132(GSM651908)
small RNA(18-35nt)small RNA deep sequencing o. (uterus)

SRR189779(GSM714639)
cell line: HEK293clip variant: PAR-CLIPenzyma. (cell line)

GSM1105749AGO2(GSM1105749)
small RNA sequencing data. (ago2 hela)

SRR037932(GSM510470)
293cand4_rep1. (cell line)

TAX577590(Rovira)
total RNA. (breast)

SRR330861(SRX091699)
tissue: skin psoriatic involveddisease state:. (skin)

SRR330919(SRX091757)
tissue: normal skindisease state: normal. (skin)

SRR363676(GSM830253)
cell type: human foreskin fibroblasts (HFF)tr. (fibroblast)

SRR038859(GSM458542)
MM386. (cell line)

TAX577742(Rovira)
total RNA. (breast)

SRR015448(SRR015448)
cytoplasmic small RNAs. (breast)

SRR037941(GSM510479)
293DroshaTN. (cell line)

GSM956925Ago2(GSM956925)
"cell line: HEK293 cell linepassages: 15-20ip. (ago2 cell line)

SRR189786

GSM450600(GSM450600)
miRNA sequencing raw reads from post-mortem s. (brain)

SRR330894(SRX091732)
tissue: skin psoriatic uninvolveddisease stat. (skin)

SRR330860(SRX091698)
tissue: skin psoriatic involveddisease state:. (skin)

SRR107296(GSM677703)
18-30nt fraction of small RNA. (cell line)

SRR037934(GSM510472)
293cand4_rep3. (cell line)

TAX577744(Rovira)
total RNA. (breast)

SRR191431(GSM715541)
168genomic small RNA (size selected RNA from . (breast)

SRR330869(SRX091707)
tissue: skin psoriatic involveddisease state:. (skin)

SRR326282(GSM769512)
"Dicer mRNA was knocked down using siDicer, t. (cell line)

TAX577738(Rovira)
total RNA. (breast)

SRR342895(SRX096791)
small RNA seq of Left atrial tissue. (heart)

SRR342897(SRX096793)
small RNA seq of Left atrial tissue. (heart)

GSM450605(GSM450605)
miRNA sequencing raw reads from post-mortem s. (brain)

SRR330866(SRX091704)
tissue: skin psoriatic involveddisease state:. (skin)

SRR342898(SRX096794)
small RNA seq of Right atrial tissue. (heart)

SRR191540(GSM715650)
62genomic small RNA (size selected RNA from t. (breast)

TAX577745(Rovira)
total RNA. (breast)

SRR033729(GSM497074)
splenic MZL (Splenic414). (B cell)

SRR444040(SRX128888)
Sample 1cDNABarcode: AF-PP-333: ACG CTC TTC C. (skin)

SRR330895(SRX091733)
tissue: skin psoriatic uninvolveddisease stat. (skin)

SRR330901(SRX091739)
tissue: skin psoriatic uninvolveddisease stat. (skin)

...................................................................................................................................................................................GTTCCTGTCTCCACCCTGCAGA.................................................

34.00

4.00

10.00

2.00

1.00

2.00

1.00

2.00

1.00

....................................................................................................................................................................................TTCCTGTCTCCACCCTGCAGA.................................................

17.00

4.00

1.00

2.00

1.00

..................................................................................................................................................................................TGTTCCTGTCTCCACCCTGCAGT.................................................

8.00

7.00

1.00

....................................................................................................................................................................................TTCCTGTCTCCACCCTGCAGAA................................................

5.00

4.00

3.00

1.00

....................................................................................................................................................................................TTCCTGTCTCCACCCTGCAGT.................................................

5.00

1.00

....................................................................................................................................................................................TTCCTGTCTCCACCCTGCAG..................................................

4.00

1.00

2.00

4.00

1.00

4.00

2.00

1.00

4.00

3.00

1.00

....................................................................................................................................................................................TTCCTGTCTCCACCCTGCAGAAT...............................................

4.00

..................................................................................................................................................................................TGTTCCTGTCTCCACCCTGCAGA.................................................

3.00

0.00

1.00

....................................................................................................................................................................................TTCCTGTCTCCACCCTGCAGAC................................................

3.00

4.00

3.00

...................................................................................................................................................................................GTTCCTGTCTCCACCCTGCA...................................................

3.00

1.00

.........................................................................................................................................................................................................................................TTCTGCTCATGGATGAC

2.67

2.00

4.00

2.00

....................................................................................................................................................................................TTCCTGTCTCCACCCTGCAGAAA...............................................

2.00

4.00

1.00

................................................................................................................................................................................TGTGTTCCTGTCTCCACCCTGC....................................................

2.00

1.00

....................................................................................................................................................................................TTCCTGTCTCCACCCTGCAGTT................................................

2.00

5.00

2.00

....................................................................................................................................................................................TTCCTGTCTCCACCCTGCCGC.................................................

1.00

0.00

1.00

....................................................................................................................................................................................TTCCTGTCTCCACCCTGCAGC.................................................

1.00

4.00

1.00

....................................................................................................................................................................................TTCCTGTCTCCACCCTGCAGAGT...............................................

1.00

4.00

1.00

.............................................................................................................................................TGAGGGCCTCTGGGGAGCAC.........................................................................................

1.00

....................................................................................................................................TGTGTGGGGTGAGGGTAA....................................................................................................

1.00

0.00

1.00

4.00

1.00

................................................................................................................................................................................................................................CTCTTGGTCTTCTGCTTG........

1.00

0.00

1.00

..............................................................................................................................................................................................................................TGCTCTTGGTCTTCTGCTCATG......

1.00

...................................................................................................................................................................................GTTCCTGTCTCCACCCTGC....................................................

1.00

................................................................................................................................................................................TGTGTTCCTGTCTCCACCCAAA....................................................

1.00

0.00

1.00

.......................................................................................................................................................................................................GTGCGGCATCGTCCTGG..................................

1.00

........................................................................TTCGGCAGGAGACTGTC.................................................................................................................................................................

1.00

0.00

1.00

....................................................................................................................................................................................TTCCTGTCTCCACCCTGCAGAT................................................

1.00

4.00

1.00

..................................................................................................................................................................................TGTTCCTGTCTCCACCCTGCAGATT...............................................

1.00

0.00

1.00

..................................................................................................GGCCTGGGGGTGAAGAGATGC...................................................................................................................................

1.00

0.00

1.00

...................................................................................................................................................................................GTTCCTGTCTCCACCCTG.....................................................

1.00

...................................................................................................................................................................................GTTCCTGTCTCCACCCTGCAA..................................................

1.00

3.00

1.00

......................................................................................................................................................................................................AGTGCGGCATCGTCCTGGGG................................

1.00

....................................................................................................................................................................................TTCCTGTCTCCACCCTGCAGAGC...............................................

1.00

4.00

1.00

......................................................................................................TGGGGGTGAAGAGGGTCCTCA...............................................................................................................................

1.00

.....................................................................................TGGGATGGAGCGGGGTAG...................................................................................................................................................

1.00

0.00

1.00

...................................................................................................................................................................................GTTCCTGTCTCCACCCTGCATTA................................................

1.00

3.00

1.00

....................................................................................................................................................................................TTCCTGTCTCCACCCTGCAGAATC..............................................

1.00

4.00

1.00

...................................................................................................................................................................................GTTCCTGTCTCCACCCTGCCGA.................................................

1.00

....................................................................................................................................................................................TTCCTGTCTCCACCCTGCAGTTA...............................................

1.00

5.00

1.00

..........................................................................................TGGAGCGGGGCCTGGGGCCGC...........................................................................................................................................

1.00

0.00

1.00

...................................................................................................................................................................................GTTCCTGTCTCCACCCTGCAAAA................................................

1.00

3.00

1.00

................................................................................................................................................................CCTGCTGCTGTGAACACTGG......................................................................

1.00

0.00

1.00

4.00

1.00

....................................................................................................................................................................................TTCCTGTCTCCACCCTGCAGATA...............................................

1.00

4.00

1.00

....................................................................................................................................................................................TTCCTGTCTCCACCCTGCAGAGA...............................................

1.00

4.00

1.00

...................................CAAGGAAATGGCCCTTT......................................................................................................................................................................................................

0.50

............................................................................................GAGCGGGGCCTGGGGGTG............................................................................................................................................

0.50

GCTTCATCCCTGGACAAGGCGCGCGGCCACCACAGCAAGGAAATGGCCCTTTCAGTGCTAGGAAGTGTCGCGTTCGGCAGGAGACTGGGATGGAGCGGGGCCTGGGGGTGAAGAGGGTCCTCATGAGCCGCGTGTGTGGGGTGAGGGCCTCTGGGGAGCACCTGCTGCTGTGAACATGTGTTCCTGTCTCCACCCTGCAGTGCGGCATCGTCCTGGGGGCGCTGCTCTTGGTCTTCTGCTCATGGATGAC .........................................................................................................................................((((((..(((.....((((((((.((..........)).)))))))))))..))))))...................................................... ........................................................................................................................................137............................................................200................................................	Size	Perfect hit	Total Norm	Perfect Norm	SRR207113(GSM721075) IP against AGO 1 & 2. (ago1/2 cell line)	SRR207114(GSM721076) "IP against AGO 1 & 2, RRP40 knockdown". (ago1/2 RRP40 cell line)	SRR326279(GSM769509) cytoplasmic fraction was isolated using PARIS. (cell line)	SRR207116(GSM721078) Nuclear RNA. (cell line)	SRR189782	SRR037944(GSM510482) 293DcrTN_cand5. (cell line)	DRR000555(DRX000313) "THP-1 whole cell RNA, no treatment". (cell line)	DRR000557(DRX000315) "THP-1 whole cell RNA, after 3 day treatment . (cell line)	SRR387910(GSM843862) antibody for ip: Ago2. (ago2 cell line)	SRR387909(GSM843861) specific-host: Homo sapienshost cell line: Su. (cell line)	SRR207115(GSM721077) XRN1&2 knockdown. (XRN1/XRN2 cell line)	SRR207110(GSM721072) Nuclear RNA. (cell line)	SRR553575(SRX182781) source: Kidney. (Kidney)	SRR342899(SRX096795) small RNA seq of Left atrial tissue. (heart)	SRR330921(SRX091759) tissue: normal skindisease state: normal. (skin)	SRR330908(SRX091746) tissue: normal skindisease state: normal. (skin)	DRR000561(DRX000319) Isolation of RNA following immunoprecipitatio. (ago2 cell line)	SRR037935(GSM510473) 293cand3. (cell line)	SRR033722(GSM497067) KMS12 cell line (KMS12). (B cell)	SRR039625(GSM531988) HBV(-) HCV(-) HCC Tissue Sample. (liver)	TAX577746(Rovira) total RNA. (breast)	GSM450604(GSM450604) miRNA sequencing raw reads from post-mortem s. (brain)	SRR191592(GSM715702) 59genomic small RNA (size selected RNA from t. (breast)	SRR553573(SRX182779) source: Cerebellum. (Cerebellum)	SRR330896(SRX091734) tissue: skin psoriatic uninvolveddisease stat. (skin)	DRR001489(DRX001043) "Hela short nuclear cell fraction, control". (hela)	GSM450602(GSM450602) miRNA sequencing raw reads from post-mortem s. (brain)	SRR330915(SRX091753) tissue: normal skindisease state: normal. (skin)	DRR000560(DRX000318) Isolation of RNA following immunoprecipitatio. (ago1 cell line)	SRR037933(GSM510471) 293cand4_rep2. (cell line)	RoviraIPAgo2(Rovira) total RNA. (ago2 breast)	SRR191528(GSM715638) 130genomic small RNA (size selected RNA from . (breast)	SRR330905(SRX091743) tissue: normal skindisease state: normal. (skin)	SRR037936(GSM510474) 293cand1. (cell line)	SRR060983(GSM569187) Human pre-germinal center B cell [09-001]. (cell line)	SRR039191(GSM494810) PBMCs were isolated by ficoll gradient from t. (blood)	DRR000562(DRX000320) Isolation of RNA following immunoprecipitatio. (ago3 cell line)	SRR330913(SRX091751) tissue: normal skindisease state: normal. (skin)	SRR553572(SRX182778) source: Frontal Cortex. (Frontal Cortex)	SRR330906(SRX091744) tissue: normal skindisease state: normal. (skin)	DRR000556(DRX000314) "THP-1 whole cell RNA, after 3 day treatment . (cell line)	SRR330903(SRX091741) tissue: skin psoriatic uninvolveddisease stat. (skin)	SRR037943(GSM510481) 293DcrTN. (cell line)	GSM450609(GSM450609) miRNA sequencing raw reads from post-mortem s. (brain)	GSM416733(GSM416733) HEK293. (cell line)	SRR330923(SRX091761) tissue: normal skindisease state: normal. (skin)	SRR029128(GSM416757) H520. (cell line)	SRR037931(GSM510469) 293GFP. (cell line)	SRR060982(GSM569186) Human centrocyte [09-001]. (cell line)	GSM450603(GSM450603) miRNA sequencing raw reads from post-mortem s. (brain)	SRR094132(GSM651908) small RNA(18-35nt)small RNA deep sequencing o. (uterus)	SRR189779(GSM714639) cell line: HEK293clip variant: PAR-CLIPenzyma. (cell line)	GSM1105749AGO2(GSM1105749) small RNA sequencing data. (ago2 hela)	SRR037932(GSM510470) 293cand4_rep1. (cell line)	TAX577590(Rovira) total RNA. (breast)	SRR330861(SRX091699) tissue: skin psoriatic involveddisease state:. (skin)	SRR330919(SRX091757) tissue: normal skindisease state: normal. (skin)	SRR363676(GSM830253) cell type: human foreskin fibroblasts (HFF)tr. (fibroblast)	SRR038859(GSM458542) MM386. (cell line)	TAX577742(Rovira) total RNA. (breast)	SRR015448(SRR015448) cytoplasmic small RNAs. (breast)	SRR037941(GSM510479) 293DroshaTN. (cell line)	GSM956925Ago2(GSM956925) "cell line: HEK293 cell linepassages: 15-20ip. (ago2 cell line)	SRR189786	GSM450600(GSM450600) miRNA sequencing raw reads from post-mortem s. (brain)	SRR330894(SRX091732) tissue: skin psoriatic uninvolveddisease stat. (skin)	SRR330860(SRX091698) tissue: skin psoriatic involveddisease state:. (skin)	SRR107296(GSM677703) 18-30nt fraction of small RNA. (cell line)	SRR037934(GSM510472) 293cand4_rep3. (cell line)	TAX577744(Rovira) total RNA. (breast)	SRR191431(GSM715541) 168genomic small RNA (size selected RNA from . (breast)	SRR330869(SRX091707) tissue: skin psoriatic involveddisease state:. (skin)	SRR326282(GSM769512) "Dicer mRNA was knocked down using siDicer, t. (cell line)	TAX577738(Rovira) total RNA. (breast)	SRR342895(SRX096791) small RNA seq of Left atrial tissue. (heart)	SRR342897(SRX096793) small RNA seq of Left atrial tissue. (heart)	GSM450605(GSM450605) miRNA sequencing raw reads from post-mortem s. (brain)	SRR330866(SRX091704) tissue: skin psoriatic involveddisease state:. (skin)	SRR342898(SRX096794) small RNA seq of Right atrial tissue. (heart)	SRR191540(GSM715650) 62genomic small RNA (size selected RNA from t. (breast)	TAX577745(Rovira) total RNA. (breast)	SRR033729(GSM497074) splenic MZL (Splenic414). (B cell)	SRR444040(SRX128888) Sample 1cDNABarcode: AF-PP-333: ACG CTC TTC C. (skin)	SRR330895(SRX091733) tissue: skin psoriatic uninvolveddisease stat. (skin)	SRR330901(SRX091739) tissue: skin psoriatic uninvolveddisease stat. (skin)
.....................CGCGGCCACCACAGCTGG...................................................................................................................................................................................................................	18		2.00	0.00	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	1.00	-	-	-	-	1.00	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-
.....................CGCGGCCACCACAGCTGGG..................................................................................................................................................................................................................	19		1.00	0.00	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	1.00	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-
............................................................................................GAGCGGGGCCTGGGGGCC............................................................................................................................................	18		1.00	0.00	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	1.00	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-
..............................................................................................GCGGGGCCTGGGGGTGATCC........................................................................................................................................	20		1.00	0.00	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	1.00	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-
..........................................................................................................................................................................................................................GCGCTGCTCTTGGTCTTGA.............	19		1.00	0.00	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	1.00	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-
....................................................................CGCGTTCGGCAGGAGCCA....................................................................................................................................................................	18		1.00	0.00	-	-	-	-	1.00	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-
.....................................................................................................................................................................................................................................CCATGAGCAGAAGACC.....	16	4	0.25	0.25	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	0.25