ID: uc002jyj.1_intron_0_0_chr17_78389051_f
GENE: ENDOV(1)
chr17:78389001-78389499+


(1)
AGO1.ip
(1)
AGO1.ip OTHER.mut
(1)
AGO2.ip
(9)
B-CELL
(5)
BRAIN
(15)
BREAST
(44)
CELL-LINE
(7)
CERVIX
(1)
FIBROBLAST
(1)
HEART
(4)
HELA
(1)
KIDNEY
(7)
LIVER
(2)
OTHER
(1)
RRP40.ip
(28)
SKIN
(1)
TESTES
(2)
UTERUS
(1)
XRN.ip

Sense strand
CTGGAGGCGGCGGGAGGGCCGCCGGAGGAAACGCTGTCACTGTGGAAACGGTAATGCTGTCAGGCGACGCGCAGGAGGCGGGGGCCGAGGCCGGGCGGCCCTTCGCGGACCCTCCGAGCTCATAGTCTTCAGGCTGTGGAATCGGAGCTGCCACCGCCCGAGACTCCAAAGCAAAGCCCAGTTTCCGGCGCGGAAGCGGAGGGATCTCAGGAATTGTAGTCCGCGGGGTGGGCGCGGTTCTCGCTTCCGGCCAGTTTGTCTGGCCTGCGCTTGCGCGGGTCTCCGCCGCCTGGGCTCCTAGGGACTGTGGCCTCGGCGGTATGTCCCTTGCTTTCCCTTGAAGCGGGAGAAGACCCGGCAGAGGCGCTCTGTCCGCTGCAGCCGCGCGGGTGGAGGAGGCAGAGTCTGAGGTGTGACCCCGACCAAGTTTGACGCTTCTGTCCTCCTAGGGAGCAAGCTCGGCTGAAGGCCCACGTCGTAGACCGGGACACCGAGGCGT
........................................................................................................................................................((((.((((((((((..((...(((((((....((((((((((((((((....))).((((((((.((((((...))))))))))))))))))))))............((((((((....))))))))..))))).))))))).))..)))..))...)))))))))...................................................................................................................................................................................
........................................................................................................................................................153.......................................................................................................................................................................323..............................................................................................................................................................................
SizePerfect hitTotal NormPerfect NormSRR207116(GSM721078)
Nuclear RNA. (cell line)
SRR207115(GSM721077)
XRN1&2 knockdown. (XRN1/XRN2 cell line)
SRR207110(GSM721072)
Nuclear RNA. (cell line)
DRR001488(DRX001042)
"Hela short nuclear cell fraction, LNA(+)". (hela)
DRR001489(DRX001043)
"Hela short nuclear cell fraction, control". (hela)
SRR553576(SRX182782)
source: Testis. (testes)
SRR387909(GSM843861)
specific-host: Homo sapienshost cell line: Su. (cell line)
SRR326279(GSM769509)
cytoplasmic fraction was isolated using PARIS. (cell line)
SRR039635(GSM518472)
THP1_nuc_sRNAs. (cell line)
SRR326282(GSM769512)
"Dicer mRNA was knocked down using siDicer, t. (cell line)
RoviraIPAgo2(Rovira)
total RNA. (ago2 breast)
SRR033722(GSM497067)
KMS12 cell line (KMS12). (B cell)
DRR000557(DRX000315)
"THP-1 whole cell RNA, after 3 day treatment . (cell line)
SRR553572(SRX182778)
source: Frontal Cortex. (Frontal Cortex)
SRR330907(SRX091745)
tissue: normal skindisease state: normal. (skin)
SRR033717(GSM497062)
Mentle Cell Lymphoma (MCL112). (B cell)
SRR330887(SRX091725)
tissue: skin psoriatic uninvolveddisease stat. (skin)
SRR037941(GSM510479)
293DroshaTN. (cell line)
SRR330885(SRX091723)
tissue: skin psoriatic uninvolveddisease stat. (skin)
SRR033712(GSM497057)
Burkitt Lymphoma (BL510). (B cell)
SRR330865(SRX091703)
tissue: skin psoriatic involveddisease state:. (skin)
SRR039616(GSM531979)
HBV(+) Distal Tissue Sample 1. (liver)
SRR039625(GSM531988)
HBV(-) HCV(-) HCC Tissue Sample. (liver)
TAX577746(Rovira)
total RNA. (breast)
DRR001484(DRX001038)
"Hela long nuclear cell fraction, control". (hela)
SRR330891(SRX091729)
tissue: skin psoriatic uninvolveddisease stat. (skin)
TAX577740(Rovira)
total RNA. (breast)
SRR330884(SRX091722)
tissue: skin psoriatic uninvolveddisease stat. (skin)
SRR189779(GSM714639)
cell line: HEK293clip variant: PAR-CLIPenzyma. (cell line)
SRR038854(GSM458537)
MM653. (cell line)
SRR207114(GSM721076)
"IP against AGO 1 & 2, RRP40 knockdown". (ago1/2 RRP40 cell line)
SRR390723(GSM850202)
total small RNA. (cell line)
SRR330868(SRX091706)
tissue: skin psoriatic involveddisease state:. (skin)
SRR060168(GSM565978)
5-8F_nucleus. (cell line)
SRR330869(SRX091707)
tissue: skin psoriatic involveddisease state:. (skin)
SRR039619(GSM531982)
HBV(+) HCC Tissue Sample 1. (liver)
SRR326280(GSM769510)
total cell content of unperturbed cells was s. (cell line)
SRR326281(GSM769511)
"Dicer mRNA was knocked down using siDicer, c. (cell line)
SRR039611(GSM531974)
Human Normal Liver Tissue Sample 1. (liver)
SRR191590(GSM715700)
48genomic small RNA (size selected RNA from t. (breast)
SRR330902(SRX091740)
tissue: skin psoriatic uninvolveddisease stat. (skin)
GSM359208(GSM359208)
hepg2_bindASP_hl_2. (cell line)
SRR342899(SRX096795)
small RNA seq of Left atrial tissue. (heart)
SRR330867(SRX091705)
tissue: skin psoriatic involveddisease state:. (skin)
SRR330889(SRX091727)
tissue: skin psoriatic uninvolveddisease stat. (skin)
SRR330880(SRX091718)
tissue: skin psoriatic involveddisease state:. (skin)
SRR189784GSM532889(GSM532889)
G576N. (cervix)
SRR094129(GSM651905)
small RNA(18-35nt)small RNA deep sequencing o. (uterus)
SRR191485(GSM715595)
123genomic small RNA (size selected RNA from . (breast)
DRR000555(DRX000313)
"THP-1 whole cell RNA, no treatment". (cell line)
SRR330888(SRX091726)
tissue: skin psoriatic uninvolveddisease stat. (skin)
SRR094130(GSM651906)
small RNA(18-35nt)small RNA deep sequencing o. (uterus)
SRR330892(SRX091730)
tissue: skin psoriatic uninvolveddisease stat. (skin)
SRR207111(GSM721073)
Whole cell RNA. (cell line)
SRR343332(GSM796035)
"KSHV (HHV8), EBV (HHV-4)". (cell line)
SRR207113(GSM721075)
IP against AGO 1 & 2. (ago1/2 cell line)
SRR040016(GSM532901)
G645N. (cervix)
DRR000556(DRX000314)
"THP-1 whole cell RNA, after 3 day treatment . (cell line)
SRR330922(SRX091760)
tissue: normal skindisease state: normal. (skin)
SRR191492(GSM715602)
154genomic small RNA (size selected RNA from . (breast)
SRR553573(SRX182779)
source: Cerebellum. (Cerebellum)
SRR033724(GSM497069)
L428 cell line (L428). (B cell)
GSM532874(GSM532874)
G699T. (cervix)
DRR000558(DRX000316)
"THP-1 whole cell RNA, after 3 day treatment . (cell line)
SRR207118(GSM721080)
RRP40 knockdown. (RRP40 cell line)
SRR444049(SRX128897)
Sample 9cDNABarcode: AF-PP-334: ACG CTC TTC C. (skin)
SRR343333(GSM796036)
KSHV (HHV8). (cell line)
SRR039617(GSM531980)
HBV(+) Adjacent Tissue Sample 1. (liver)
SRR033721(GSM497066)
Ly3 cell line (Ly3). (B cell)
SRR060982(GSM569186)
Human centrocyte [09-001]. (cell line)
SRR330875(SRX091713)
tissue: skin psoriatic involveddisease state:. (skin)
SRR039612(GSM531975)
Human Normal Liver Tissue Sample 2. (liver)
TAX577739(Rovira)
total RNA. (breast)
TAX577741(Rovira)
total RNA. (breast)
SRR189780(GSM714640)
cell line: HEK293clip variant: PAR-CLIPenzyma. (cell line)
SRR330861(SRX091699)
tissue: skin psoriatic involveddisease state:. (skin)
SRR330919(SRX091757)
tissue: normal skindisease state: normal. (skin)
SRR038859(GSM458542)
MM386. (cell line)
TAX577742(Rovira)
total RNA. (breast)
DRR001486(DRX001040)
"Hela long cytoplasmic cell fraction, LNA(+)". (hela)
SRR040006(GSM532891)
G601N. (cervix)
DRR000559(DRX000317)
"THP-1 whole cell RNA, no treatment". (cell line)
SRR033713(GSM497058)
Burkitt Lymphoma (BL115). (B cell)
GSM450608(GSM450608)
miRNA sequencing raw reads from post-mortem s. (brain)
TAX577579(Rovira)
total RNA. (breast)
SRR038860(GSM458543)
MM426. (cell line)
SRR330870(SRX091708)
tissue: skin psoriatic involveddisease state:. (skin)
GSM450600(GSM450600)
miRNA sequencing raw reads from post-mortem s. (brain)
SRR330894(SRX091732)
tissue: skin psoriatic uninvolveddisease stat. (skin)
SRR029132(GSM416761)
MB-MDA231. (cell line)
GSM450602(GSM450602)
miRNA sequencing raw reads from post-mortem s. (brain)
TAX577744(Rovira)
total RNA. (breast)
SRR039622(GSM531985)
HCV(+) Adjacent Tissue Sample. (liver)
SRR038863(GSM458546)
MM603. (cell line)
SRR015360(GSM380325)
Plasma B cells (PC137). (B cell)
SRR033728(GSM497073)
MALT (MALT413). (B cell)
SRR029131(GSM416760)
MCF7. (cell line)
SRR060986(GSM569190)
Human memory B cell [09-001]. (cell line)
TAX577453(Rovira)
total RNA. (breast)
GSM450605(GSM450605)
miRNA sequencing raw reads from post-mortem s. (brain)
SRR038856(GSM458539)
D11. (cell line)
SRR038862(GSM458545)
MM472. (cell line)
SRR330866(SRX091704)
tissue: skin psoriatic involveddisease state:. (skin)
SRR330878(SRX091716)
tissue: skin psoriatic involveddisease state:. (skin)
GSM450597(GSM450597)
miRNA sequencing raw reads from post-mortem s. (brain)
SRR363674(GSM830251)
cell type: human foreskin fibroblasts (HFF)tr. (fibroblast)
SRR330916(SRX091754)
tissue: normal skindisease state: normal. (skin)
TAX577745(Rovira)
total RNA. (breast)
SRR039637(GSM518474)
THP1_total_sRNAs. (cell line)
SRR033711(GSM497056)
GCB DLBCL (GCB110). (B cell)
SRR330859(SRX091697)
tissue: skin psoriatic involveddisease state:. (skin)
TAX577743(Rovira)
total RNA. (breast)
SRR191622(GSM715732)
175genomic small RNA (size selected RNA from . (breast)
SRR040015(GSM532900)
G623T. (cervix)
SRR037942(GSM510480)
293DroshaTN_cand5. (cell line)
SRR040027(GSM532912)
G220T. (cervix)
SRR330905(SRX091743)
tissue: normal skindisease state: normal. (skin)
SRR330883(SRX091721)
tissue: skin psoriatic uninvolveddisease stat. (skin)
SRR553575(SRX182781)
source: Kidney. (Kidney)
SRR040037(GSM532922)
G243T. (cervix)
SRR037943(GSM510481)
293DcrTN. (cell line)
SRR037937(GSM510475)
293cand2. (cell line)
SRR330901(SRX091739)
tissue: skin psoriatic uninvolveddisease stat. (skin)
SRR029130(GSM416759)
DLD2. (cell line)
SRR037934(GSM510472)
293cand4_rep3. (cell line)
SRR037939(GSM510477)
293cand5_rep1. (cell line)
SRR037944(GSM510482)
293DcrTN_cand5. (cell line)
SRR343336
...........................................................................................................................................................................................................................................................................................................AGGGACTGTGGCCTCGGCGG....................................................................................................................................................................................20119.0019.0010.004.005.00------------------------------------------------------------------------------------------------------------------------------
..............................ACGCTGTCACTGTGGAAACGG................................................................................................................................................................................................................................................................................................................................................................................................................................................................21118.0018.00-9.00-2.00-----2.00---1.00-----1.00---------1.00----------------------------------------------------1.00---------------1.00------------------------------
.................................CTGTCACTGTGGAAACGG................................................................................................................................................................................................................................................................................................................................................................................................................................................................18112.0012.002.004.001.00-----1.00--1.00--------------------------1.00-------------------1.00--------------------------------------------------1.00-------------------
................................GCTGTCACTGTGGAAACGG................................................................................................................................................................................................................................................................................................................................................................................................................................................................19112.0012.006.00-------1.001.00---------------------1.00-2.00--------------------------------------------------1.00--------------------------------------------
..................................TGTCACTGTGGAAACGG................................................................................................................................................................................................................................................................................................................................................................................................................................................................1719.009.00---4.005.00----------------------------------------------------------------------------------------------------------------------------
............................................................................................................................................................................................................................................................................................................GGGACTGTGGCCTCGGCGG....................................................................................................................................................................................1917.007.002.00-5.00------------------------------------------------------------------------------------------------------------------------------
.............................................................................................................................................................CCGAGACTCCAAAGCAAAGCCC................................................................................................................................................................................................................................................................................................................................2216.006.00------6.00--------------------------------------------------------------------------------------------------------------------------
...........................................................................................................................................................................................................................................................................................................AGGGACTGTGGCCTCGGC......................................................................................................................................................................................1816.006.00-2.00-1.00---------------------1.00--------------------------------------1.00-----------1.00----------------------------------------------------
.........................................................................................................................................................................................................................................................................................................CTAGGGACTGTGGCCTCGGC......................................................................................................................................................................................2016.006.00-4.001.00-------------------------------1.00----------------------------------------------------------------------------------------------
..........................................................................................................................................................................................................................................................................................................TAGGGACTGTGGCCTCGGCGG....................................................................................................................................................................................2113.003.00-1.00------------------1.00-------------1.00----------------------------------------------------------------------------------------------
.TGGAGGCGGCGGGAGGGC................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................1813.003.00--------------------------------------1.00---------------------------1.00--------------1.00-----------------------------------------------
...........................................................................................................................................................................................................................................................................................................AGGGACTGTGGCCTCGGCGGGG..................................................................................................................................................................................2213.0019.001.00-----------------------------2.00--------------------------------------------------------------------------------------------------
.................GCCGCCGGAGGAAACGC.................................................................................................................................................................................................................................................................................................................................................................................................................................................................................1713.003.00---3.00-----------------------------------------------------------------------------------------------------------------------------
................................GCTGTCACTGTGGAAACGGT...............................................................................................................................................................................................................................................................................................................................................................................................................................................................2013.003.00-------------------------1.00---1.00-----------------------------------------------------1.00---------------------------------------------
.................................................................................................................................................................................................................................................................................................CTGGGCTCCTAGGGACTG................................................................................................................................................................................................1813.003.00---------------2.00---------------------------------------------------------------------1.00-------------------------------------------
.......................................................................................................................................................................................................................................................................................................TCCTAGGGACTGTGGCCTC.........................................................................................................................................................................................1913.003.00--3.00------------------------------------------------------------------------------------------------------------------------------
.............................AACGCTGTCACTGTGGAAACGG................................................................................................................................................................................................................................................................................................................................................................................................................................................................2213.003.002.00-----------------------------------1.00--------------------------------------------------------------------------------------------
........................GAGGAAACGCTGTCACTG.........................................................................................................................................................................................................................................................................................................................................................................................................................................................................1823.003.00---0.50-------------2.50---------------------------------------------------------------------------------------------------------------
.....................................................................................................................................................................................................................................................................................................GCTCCTAGGGACTGTGG.............................................................................................................................................................................................1713.003.00--3.00------------------------------------------------------------------------------------------------------------------------------
...........................................................................................................................................................................................................................................................................................................AGGGACTGTGGCCTCGGCGGTAT.................................................................................................................................................................................2312.002.001.00----------------------1.00---------------------------------------------------------------------------------------------------------
...............GGGCCGCCGGAGGAAACGC.................................................................................................................................................................................................................................................................................................................................................................................................................................................................................1912.002.00-----------------------------------2.00---------------------------------------------------------------------------------------------
........GGCGGGAGGGCCGCCGGAGGAAACGCTGT..............................................................................................................................................................................................................................................................................................................................................................................................................................................................................2912.002.00-2.00-------------------------------------------------------------------------------------------------------------------------------
.......................................................................................................................................................................................................................................................................................................TCCTAGGGACTGTGGCCT..........................................................................................................................................................................................1812.002.00----1.00-------------------------------------------------------------------------------------------------------1.00--------------------
..........................GGAAACGCTGTCACTGTGGAAACGGG...............................................................................................................................................................................................................................................................................................................................................................................................................................................................262.000.00----------2.00----------------------------------------------------------------------------------------------------------------------
..........CGGGAGGGCCGCCGGAGGA......................................................................................................................................................................................................................................................................................................................................................................................................................................................................................1912.002.002.00--------------------------------------------------------------------------------------------------------------------------------
.................GCCGCCGGAGGAAACG..................................................................................................................................................................................................................................................................................................................................................................................................................................................................................1612.002.00---2.00-----------------------------------------------------------------------------------------------------------------------------
.................................................................................................................................................................................................................................................................................................CTGGGCTCCTAGGGACTGTGGCCT..........................................................................................................................................................................................2412.002.002.00--------------------------------------------------------------------------------------------------------------------------------
................................GCTGTCACTGTGGAAACGGTA..............................................................................................................................................................................................................................................................................................................................................................................................................................................................2112.002.00----------------------------------------------------1.00---------------------------------1.00------------------------------------------
..............................ACGCTGTCACTGTGGAAACGGT...............................................................................................................................................................................................................................................................................................................................................................................................................................................................2212.002.00-------------------------------1.00------------------------------------------1.00------------------------------------------------------
............................................................................................................................................................................................................................................................................................................GGGACTGTGGCCTCGGCGGTATG................................................................................................................................................................................2311.001.00------------------------------------------------------1.00--------------------------------------------------------------------------
.......CGGCGGGAGGGCCGCTGC..........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................181.000.00---------------------1.00-----------------------------------------------------------------------------------------------------------
.TGGAGGCGGCGGGAGGGCCGCCGGAGGAAACGCTGTCACTGTGGAAACGGTAATG...........................................................................................................................................................................................................................................................................................................................................................................................................................................................5511.001.00------------------------1.00--------------------------------------------------------------------------------------------------------
.................................CTGTCACTGTGGAAACGGG...............................................................................................................................................................................................................................................................................................................................................................................................................................................................1911.0012.00-----------------------------------------------------------------------------------------1.00---------------------------------------
.........GCGGGAGGGCCGCCGCG.........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................171.000.00-------1.00-------------------------------------------------------------------------------------------------------------------------
.....................................................................................................................................................................................................................................................................................................................................................................................................................................................................CAAGCTCGGCTGAAGGCC............................1811.001.00-----------------------------------------------------------------------------1.00---------------------------------------------------
...................................................................................................................................................................................................................................................................................................GGGCTCCTAGGGACTGTG..............................................................................................................................................................................................1811.001.00------------1.00--------------------------------------------------------------------------------------------------------------------
............................................................................................................................................................................................................................................................................................................GGGACTGTGGCCTCGGCGGGATG................................................................................................................................................................................2311.007.00------------1.00--------------------------------------------------------------------------------------------------------------------
......................................................................................................................................................................................................................................................................................................CTCCTAGGGACTGTGGCCTCGGCGGTG..................................................................................................................................................................................271.000.00-------------------------------------------------------------------------------1.00-------------------------------------------------
............................................................................................................................................................................................................................................................................................................GGGACTGTGGCCTCGGCGGGT..................................................................................................................................................................................2111.007.001.00--------------------------------------------------------------------------------------------------------------------------------
................................................................................................................................................................................................................................................................................................................CTGTGGCCTCGGCGGTA..................................................................................................................................................................................1711.001.00----1.00----------------------------------------------------------------------------------------------------------------------------
......................................ACTGTGGAAACGGTAATG...........................................................................................................................................................................................................................................................................................................................................................................................................................................................1811.001.00------------------------------------------------------------------------1.00--------------------------------------------------------
............................AAACGCTGTCACTGTGGAAACGGG...............................................................................................................................................................................................................................................................................................................................................................................................................................................................241.000.00---------------------------------------1.00-----------------------------------------------------------------------------------------
..........................................................................................................................................................................................................................................................................................................TAGGGACTGTGGCCTCGGCGGGG..................................................................................................................................................................................2311.003.00----------------------------------------------------------------------------------------1.00----------------------------------------
..........................................................................................................................................................CGCCCGAGACTCCAAAGCAA.....................................................................................................................................................................................................................................................................................................................................2011.001.00---------------------------------------------------------------------1.00-----------------------------------------------------------
...........................................................................................................................................................................................................................................................................................................AGGGACTGTGGCCTCGGCGGTA..................................................................................................................................................................................2211.001.00------------------------------------------------------------------------------1.00--------------------------------------------------
.........................................................................................................................................................................................................................................................................................................................................................................................................................................................................CTCGGCTGAAGGCCCACG........................1811.001.00---1.00-----------------------------------------------------------------------------------------------------------------------------
.................GCCGCCGGAGGAAACGCTG...............................................................................................................................................................................................................................................................................................................................................................................................................................................................................1911.001.00----------------------------------------------------------------------------------------------------------1.00----------------------
...............................CGCTGTCACTGTGGAAACGGTA..............................................................................................................................................................................................................................................................................................................................................................................................................................................................2211.001.00---------------------------------------------------------------------------------------------------------------1.00-----------------
....................................................................................................................................................................................................................................................................................................GGCTCCTAGGGACTGTGGCC...........................................................................................................................................................................................2011.001.001.00--------------------------------------------------------------------------------------------------------------------------------
..............................................................................................................................................................................................................................................................................................CGCCTGGGCTCCTAGGGACTG................................................................................................................................................................................................2111.001.00--------1.00------------------------------------------------------------------------------------------------------------------------
..................................TGTCACTGTGGAAACGC................................................................................................................................................................................................................................................................................................................................................................................................................................................................171.000.00----1.00----------------------------------------------------------------------------------------------------------------------------
..................................................................................GGCCGAGGCCGGGCGTCC...............................................................................................................................................................................................................................................................................................................................................................................................................181.000.00--------------1.00------------------------------------------------------------------------------------------------------------------
.....................................................................................CGAGGCCGGGCGGCCCC.............................................................................................................................................................................................................................................................................................................................................................................................................171.000.00-------------------------------------1.00-------------------------------------------------------------------------------------------
.......................GGAGGAAACGCTGTCCCT..........................................................................................................................................................................................................................................................................................................................................................................................................................................................................181.000.00---------------------1.00-----------------------------------------------------------------------------------------------------------
..........................................................................................................................................................................................................................................................................................................................................................................GGCGCTCTGTCCGCTGCAGCCGCGCGGT.............................................................................................................281.000.00-----------------------------------------------------------------------------------------------------1.00---------------------------
............................................................................................................................................................................................................................CCGCGGGGTGGGCGCGCGA....................................................................................................................................................................................................................................................................191.000.00--------------------------------------------------------------------------------------------1.00------------------------------------
...................................................................................................................................................................................................................................................................................................GGGCTCCTAGGGACTGTGGC............................................................................................................................................................................................2011.001.001.00--------------------------------------------------------------------------------------------------------------------------------
............................AAACGCTGTCACTGTGGAAAAG.................................................................................................................................................................................................................................................................................................................................................................................................................................................................221.000.00----1.00----------------------------------------------------------------------------------------------------------------------------
....................GCCGGAGGAAACGCTGTCAC...........................................................................................................................................................................................................................................................................................................................................................................................................................................................................2011.001.00-------------------1.00-------------------------------------------------------------------------------------------------------------
...........................................................................................................................................................................................................................................................................................................AGGGACTGTGGCCTCGGCGGG...................................................................................................................................................................................2111.0019.001.00--------------------------------------------------------------------------------------------------------------------------------
..................................................................................................................................................................................................................................................................................................................................................................................................CGGGTGGAGGAGGCAGAA...............................................................................................181.000.00---------------------------------------------------------------1.00-----------------------------------------------------------------
.........................................................................................................................ATAGTCTTCAGGCTGTGGAATCGGAGC...............................................................................................................................................................................................................................................................................................................................................................2711.001.00-----1.00---------------------------------------------------------------------------------------------------------------------------
........................GAGGAAACGCTGTCACTGTC.......................................................................................................................................................................................................................................................................................................................................................................................................................................................................201.000.00--------------1.00------------------------------------------------------------------------------------------------------------------
.....................................................................................................................................................................................................................................................................................................GCTCCTAGGGACTGTGGCCT..........................................................................................................................................................................................2011.001.00---------1.00-----------------------------------------------------------------------------------------------------------------------
....................................................................................CCGAGGCCGGGCGGCGGC.............................................................................................................................................................................................................................................................................................................................................................................................................181.000.00-------------------------------------1.00-------------------------------------------------------------------------------------------
.......................................................................................................................................................................................................................................................................................................TCCTAGGGACTGTGGCCTCGG.......................................................................................................................................................................................2111.001.00-------------------------------------------------1.00-------------------------------------------------------------------------------
.....................................................................................................................................................................................................................................................................................................GCTCCTAGGGACTGTGGCCTCGG.......................................................................................................................................................................................2311.001.00----------1.00----------------------------------------------------------------------------------------------------------------------
................................GCTGTCACTGTGGAAAC..................................................................................................................................................................................................................................................................................................................................................................................................................................................................1711.001.00---------1.00-----------------------------------------------------------------------------------------------------------------------
.............GAGGGCCGCCGGAGGAAA....................................................................................................................................................................................................................................................................................................................................................................................................................................................................................1811.001.00------------------------------------------------------------------------------------------------1.00--------------------------------
.....................................................................................................................................................................................................................................................................................................GCTCCTAGGGACTGTGGCCTCGGCG.....................................................................................................................................................................................2511.001.00-------------------------------------------------------------------------1.00-------------------------------------------------------
...............................................................................................................................................................................................................................................................................................................................................CCTTGAAGCGGGAGAAGAC.................................................................................................................................................1911.001.00-1.00-------------------------------------------------------------------------------------------------------------------------------
.......................................................................................................................................................................................................................................................................................................TCCTAGGGACTGTGGCCTCGGC......................................................................................................................................................................................2211.001.00------------1.00--------------------------------------------------------------------------------------------------------------------
.........................AGGAAACGCTGTCACTGTGGAAACGG................................................................................................................................................................................................................................................................................................................................................................................................................................................................2611.001.00--------------------------------------------------------------------------------------------------------------1.00------------------
...........GGGAGGGCCGCCGGAGGA......................................................................................................................................................................................................................................................................................................................................................................................................................................................................................1811.001.00---------------------------------------------------------------------------------------------1.00-----------------------------------
.......................................................................................................................................................................................................................................................................................................................................................................AGAGGCGCTCTGTCCGCTGCA.......................................................................................................................2111.001.00------------------------------------------------1.00--------------------------------------------------------------------------------
...............................................ACGGTAATGCTGTCAGGCGACG..............................................................................................................................................................................................................................................................................................................................................................................................................................................2211.001.00----------------------------------------------------------------------------------------------------------------1.00----------------
...............................................................................................................................................................................................................CAGGAATTGTAGTCCGCGGGGTGGG...........................................................................................................................................................................................................................................................................2511.001.00-------------1.00-------------------------------------------------------------------------------------------------------------------
.....................................................................................................................................................................................................................................................................................................GCTCCTAGGGACTGTGGCCTCGTC......................................................................................................................................................................................241.000.00------------------------------------------------------------------------------------------------------1.00--------------------------
......................CGGAGGAAACGCTGTCACTGTG.......................................................................................................................................................................................................................................................................................................................................................................................................................................................................2211.001.00-------------------------------------------------------------1.00-------------------------------------------------------------------
...........................................................................................................................................................................................................................................................................................................................................................................................................................................................................CGGCTGAAGGCCCACGTCGT....................2011.001.00---------------------------------------------------------------------------------------1.00-----------------------------------------
...........................................................................................................................................................................................................................................................................................................AGGGACTGTGGCCTCGAA......................................................................................................................................................................................181.000.00--------------------------------1.00------------------------------------------------------------------------------------------------
........................GAGGAAACGCTGTCACTGTGGA.....................................................................................................................................................................................................................................................................................................................................................................................................................................................................2211.001.00------------1.00--------------------------------------------------------------------------------------------------------------------
.............................AACGCTGTCACTGTGGAAACGGTA..............................................................................................................................................................................................................................................................................................................................................................................................................................................................2411.001.00-----------------------------------------1.00---------------------------------------------------------------------------------------
.........................................................................................................................................................................................................................................................................................................CTAGGGACTGTGGCCTCGGCGG....................................................................................................................................................................................2211.001.001.00--------------------------------------------------------------------------------------------------------------------------------
..................CCGCCGGAGGAAACGC.................................................................................................................................................................................................................................................................................................................................................................................................................................................................................1611.001.00---1.00-----------------------------------------------------------------------------------------------------------------------------
......................................ACTGTGGAAACGGTAACCA..........................................................................................................................................................................................................................................................................................................................................................................................................................................................191.000.00-----------------------------------------------------------------------------------------------1.00---------------------------------
...............................................................................................................................................................................................................................................................................................................................................CCTTGAAGCGGGAGAAGTC.................................................................................................................................................191.000.00-1.00-------------------------------------------------------------------------------------------------------------------------------
.......CGGCGGGAGGGCCGCCGG..........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................1811.001.00-------1.00-------------------------------------------------------------------------------------------------------------------------
.........................................................................................................................................................................................................................................................................................................................................................................AGGCGCTCTGTCCGCTGCAGC.....................................................................................................................2111.001.00-1.00-------------------------------------------------------------------------------------------------------------------------------
..................................TGTCACTGTGGAAACGGTAATGCTG........................................................................................................................................................................................................................................................................................................................................................................................................................................................2511.001.00----------------------------------------------------------------------1.00----------------------------------------------------------
............................AAACGCTGTCACTGTGGAAACGGGT..............................................................................................................................................................................................................................................................................................................................................................................................................................................................251.000.00---------------------------------------------------------------------------------------------------1.00-----------------------------
........................GAGGAAACGCTGTCACTGTGG......................................................................................................................................................................................................................................................................................................................................................................................................................................................................2111.001.00--------------------------------------------------------1.00------------------------------------------------------------------------
.......CGGCGGGAGGGCCGCCGGGC........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2011.001.00----------------------------1.00----------------------------------------------------------------------------------------------------
..............................................................................................................................................................................................................................................TCTCGCTTCCGGCCAAACG..................................................................................................................................................................................................................................................191.000.00------------------------------------------------------------1.00--------------------------------------------------------------------
..........................................................................................................................................................................................................................................................................................CCGCCGCCTGGGCTCACC.......................................................................................................................................................................................................181.000.00---------------------------------------------------------------------------1.00-----------------------------------------------------
.............GAGGGCCGCCGGAGGAAACGC.................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2111.001.00--------------------------------------------------------------------1.00------------------------------------------------------------
...............................CGCTGTCACTGTGGAAACGG................................................................................................................................................................................................................................................................................................................................................................................................................................................................2011.001.00----1.00----------------------------------------------------------------------------------------------------------------------------
..................................................................................................................................................................................................................................................................................................TGGGCTCCTAGGGACTGT...............................................................................................................................................................................................1811.001.00----1.00----------------------------------------------------------------------------------------------------------------------------
.............................................................AGGCGACGCGCAGGAGGC....................................................................................................................................................................................................................................................................................................................................................................................................................................1811.001.00----------------------1.00----------------------------------------------------------------------------------------------------------
...............................................ACGGTAATGCTGTCAGGCGA................................................................................................................................................................................................................................................................................................................................................................................................................................................2011.001.00--------------------1.00------------------------------------------------------------------------------------------------------------
...................................................................................................................................................................................................................................................................................................................................................................................................................GTCTGAGGTGTGACCCC...............................................................................1711.001.00-----------------------------------------------------------------------1.00---------------------------------------------------------
...........................................................................................................................................................................................................................................................................................................AGGGACTGTGGCCTCGGCAGAT..................................................................................................................................................................................2211.006.001.00--------------------------------------------------------------------------------------------------------------------------------
.............................................................................................GGCGGCCCTTCGCGGGGT....................................................................................................................................................................................................................................................................................................................................................................................................181.000.00-----------------------------------------------1.00---------------------------------------------------------------------------------
....................................TCACTGTGGAAACGGTAATG...........................................................................................................................................................................................................................................................................................................................................................................................................................................................2011.001.00------------------------------------------1.00--------------------------------------------------------------------------------------
..........................GGAAACGCTGTCACTGTGGAAACG.................................................................................................................................................................................................................................................................................................................................................................................................................................................................2411.001.00-------------------------------------------1.00-------------------------------------------------------------------------------------
.....................................................................................................................................................................................................................................................................................................................................................................................................................................................................CAAGCTCGGCTGAAGGCCC...........................1911.001.00-----------------------------------------------------------1.00---------------------------------------------------------------------
..............................................................................CGGGGGCCGAGGCCGCT....................................................................................................................................................................................................................................................................................................................................................................................................................171.000.00-----------------------1.00---------------------------------------------------------------------------------------------------------
..........CGGGAGGGCCGCCGGAGGAAAC...................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2211.001.00-------------------------------------------------------1.00-------------------------------------------------------------------------
...........................................................................................................................................................................................................................................................................................................AGGGACTGTGGCCTCGGCGGGAT.................................................................................................................................................................................2311.0019.00-------1.00-------------------------------------------------------------------------------------------------------------------------
............................................................................................................................................................................................................................................................................................................GGGACTGTGGCCTCGGCGGGGAT................................................................................................................................................................................2311.007.001.00--------------------------------------------------------------------------------------------------------------------------------
....................................................AATGCTGTCAGGCGACGCGCAGGAGGC....................................................................................................................................................................................................................................................................................................................................................................................................................................2711.001.00-----1.00---------------------------------------------------------------------------------------------------------------------------
...............................................................................................................................................................................................................................................................................................GCCTGGGCTCCTAGGGACTG................................................................................................................................................................................................2011.001.00---------------1.00-----------------------------------------------------------------------------------------------------------------
.....................................................................................................................................................................................................................................................................................................GCTCCTAGGGACTGTGGCCTCGGCGG....................................................................................................................................................................................2611.001.00--------------1.00------------------------------------------------------------------------------------------------------------------
...................................GTCACTGTGGAAACGGTAA.............................................................................................................................................................................................................................................................................................................................................................................................................................................................1911.001.00--------------------------------------------------------------1.00------------------------------------------------------------------
..................................................................................................................................................................................................................................................................................................................GTGGCCTCGGCGGTATG................................................................................................................................................................................1711.001.00---------------------------1.00-----------------------------------------------------------------------------------------------------
........................GAGGAAACGCTGTCACTGTGGAAACG.................................................................................................................................................................................................................................................................................................................................................................................................................................................................2611.001.00----1.00----------------------------------------------------------------------------------------------------------------------------
............................................................................GGCGGGGGCCGAGGCCCG.....................................................................................................................................................................................................................................................................................................................................................................................................................181.000.00------------------1.00--------------------------------------------------------------------------------------------------------------
...................................................................................................................................................................................................................................................................................................GGGCTCCTAGGGACTGTGGCCTCGG.......................................................................................................................................................................................2511.001.00-------------1.00-------------------------------------------------------------------------------------------------------------------
................................................................................................................................................................AGACTCCAAAGCAAAGCCCAGTTT...........................................................................................................................................................................................................................................................................................................................2411.001.00-------------------------------------------------------------------------------------------------1.00-------------------------------
........................GAGGAAACGCTGTCACTGTGGAAACGGT...............................................................................................................................................................................................................................................................................................................................................................................................................................................................2811.001.00--------------------------1.00------------------------------------------------------------------------------------------------------
...........................................................................................................................................................................................................................................................................................................AGGGACTGTGGCCTCGGA......................................................................................................................................................................................181.000.00--------------------------------1.00------------------------------------------------------------------------------------------------
..........................................................................................................................................GAATCGGAGCTGCCACCGCCCG...................................................................................................................................................................................................................................................................................................................................................2211.001.00--------------------------------------------1.00------------------------------------------------------------------------------------
.................................................................................GGGCCGAGGCCGGGCGTCCG..............................................................................................................................................................................................................................................................................................................................................................................................................201.000.00------------------1.00--------------------------------------------------------------------------------------------------------------
............................................................................................................................................................................................................................................................................................................GGGACTGTGGCCTCGGCGGGG..................................................................................................................................................................................2111.007.001.00--------------------------------------------------------------------------------------------------------------------------------
...........................................................................................................................................................................................................................................................................................................AGGGACTGTGGCCTCGGCGGGAC.................................................................................................................................................................................2311.0019.001.00--------------------------------------------------------------------------------------------------------------------------------
.........................................................................................................................................................................................................................................................................................................................................................................................................................................................CCTCCTAGGGAGCAAGCTCGGC....................................2211.001.00-----------------------------------------------------1.00---------------------------------------------------------------------------
...............................CGCTGTCACTGTGGAAACGGTAA.............................................................................................................................................................................................................................................................................................................................................................................................................................................................2311.001.00-----------1.00---------------------------------------------------------------------------------------------------------------------
...............................................................................................................................................................................................................................................................................................................ACTGTGGCCTCGGCGGTAT.................................................................................................................................................................................1911.001.00----------------------------------------------------------------------------------------------------1.00----------------------------
...........................................................................................................................................................................................................................................................................................................AGGGACTGTGGCCTCGGCG.....................................................................................................................................................................................1911.001.00---------------------------1.00-----------------------------------------------------------------------------------------------------
................................................................................................................................................................................................................................................................................................................CTGTGGCCTCGGCGGTATG................................................................................................................................................................................1911.001.00----------------------------------------------1.00----------------------------------------------------------------------------------
.......................................................................................................................................................................................................................................................................................................TCCTAGGGACTGTGGCCTCGGCGG....................................................................................................................................................................................2411.001.00-1.00-------------------------------------------------------------------------------------------------------------------------------
.........................AGGAAACGCTGTCACTGT........................................................................................................................................................................................................................................................................................................................................................................................................................................................................1811.001.00-----------1.00---------------------------------------------------------------------------------------------------------------------
.....................................CACTGTGGAAACGGTAATG...........................................................................................................................................................................................................................................................................................................................................................................................................................................................1911.001.00-----------1.00---------------------------------------------------------------------------------------------------------------------
............................................................................................................................................................................................................................................................................................................GGGACTGTGGCCTCGGC......................................................................................................................................................................................1711.001.00--------------------------------------------------------------------------------------------------------1.00------------------------
................................................................................................................................................................................................................................................................................................................CTGTGGCCTCGGCGGTATTGCC.............................................................................................................................................................................221.000.00---------------------------------------------------------------------------------------------------------1.00-----------------------
........................................................................................................................................................................................................................................................................................................CCTAGGGACTGTGGCCTCG........................................................................................................................................................................................1911.001.00----------------1.00----------------------------------------------------------------------------------------------------------------
.............................................................................................................................................................................................GCGGAAGCGGAGGGAGTG....................................................................................................................................................................................................................................................................................................181.000.00------------------------------------------------------------------------------------------------------------------1.00--------------
......................................ACTGTGGAAACGGTAATGCTGT.......................................................................................................................................................................................................................................................................................................................................................................................................................................................2211.001.00--------1.00------------------------------------------------------------------------------------------------------------------------
............................................................................................................................................................................................................................................................................................GCCGCCTGGGCTCCTAGG.....................................................................................................................................................................................................1811.001.00--------------------------------------------------------------------------------1.00------------------------------------------------
...........................................................................................................................................................................................................................................................................................................AGGGACTGTGGCCTCGGCGGTATGT...............................................................................................................................................................................2511.001.00-------------------------------------------------------------------------------------------1.00-------------------------------------
...................................GTCACTGTGGAAACGG................................................................................................................................................................................................................................................................................................................................................................................................................................................................1611.001.00----1.00----------------------------------------------------------------------------------------------------------------------------
................................................................................................................................................................................................................................................................................................................CTGTGGCCTCGGCGGTATGT...............................................................................................................................................................................2011.001.00-------------------------------------------------------------------------------------------------------1.00-------------------------
.....................................................................................................................................................................................................................................................................................................GCTCCTAGGGACTGTGGCCTCGGCGGGGG.................................................................................................................................................................................2911.001.00----------------------1.00----------------------------------------------------------------------------------------------------------
................GGCCGCCGGAGGAAACGC.................................................................................................................................................................................................................................................................................................................................................................................................................................................................................1811.001.00---1.00-----------------------------------------------------------------------------------------------------------------------------
.................................................................................................................................................................................................................................................................................................................................................TTGAAGCGGGAGAAGACC................................................................................................................................................1820.500.50--------------------------------------------------------------------------------------------------------------------0.50------------
..........CGGGAGGGCCGCCGG..........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................1530.330.33-------0.33-------------------------------------------------------------------------------------------------------------------------
.......................................................................................................................................................................................................................................................................................................TCCTAGGGACTGTGGC............................................................................................................................................................................................1640.250.25-----------------------------------------------------------------------------------------------------------------------0.25---------
.......................................................................................................................TCATAGTCTTCAGGC.............................................................................................................................................................................................................................................................................................................................................................................1560.170.17------------------0.17--------------------------------------------------------------------------------------------------------------
....AGGCGGCGGGAGGGC................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................1560.170.17----------------------------------------0.17----------------------------------------------------------------------------------------
.......................................................................................................................................GTGGAATCGGAGCTG.............................................................................................................................................................................................................................................................................................................................................................1560.170.17-------------0.17-------------------------------------------------------------------------------------------------------------------

Antisense strand
CTGGAGGCGGCGGGAGGGCCGCCGGAGGAAACGCTGTCACTGTGGAAACGGTAATGCTGTCAGGCGACGCGCAGGAGGCGGGGGCCGAGGCCGGGCGGCCCTTCGCGGACCCTCCGAGCTCATAGTCTTCAGGCTGTGGAATCGGAGCTGCCACCGCCCGAGACTCCAAAGCAAAGCCCAGTTTCCGGCGCGGAAGCGGAGGGATCTCAGGAATTGTAGTCCGCGGGGTGGGCGCGGTTCTCGCTTCCGGCCAGTTTGTCTGGCCTGCGCTTGCGCGGGTCTCCGCCGCCTGGGCTCCTAGGGACTGTGGCCTCGGCGGTATGTCCCTTGCTTTCCCTTGAAGCGGGAGAAGACCCGGCAGAGGCGCTCTGTCCGCTGCAGCCGCGCGGGTGGAGGAGGCAGAGTCTGAGGTGTGACCCCGACCAAGTTTGACGCTTCTGTCCTCCTAGGGAGCAAGCTCGGCTGAAGGCCCACGTCGTAGACCGGGACACCGAGGCGT
........................................................................................................................................................((((.((((((((((..((...(((((((....((((((((((((((((....))).((((((((.((((((...))))))))))))))))))))))............((((((((....))))))))..))))).))))))).))..)))..))...)))))))))...................................................................................................................................................................................
........................................................................................................................................................153.......................................................................................................................................................................323..............................................................................................................................................................................
SizePerfect hitTotal NormPerfect NormSRR207116(GSM721078)
Nuclear RNA. (cell line)
SRR207115(GSM721077)
XRN1&2 knockdown. (XRN1/XRN2 cell line)
SRR207110(GSM721072)
Nuclear RNA. (cell line)
DRR001488(DRX001042)
"Hela short nuclear cell fraction, LNA(+)". (hela)
DRR001489(DRX001043)
"Hela short nuclear cell fraction, control". (hela)
SRR553576(SRX182782)
source: Testis. (testes)
SRR387909(GSM843861)
specific-host: Homo sapienshost cell line: Su. (cell line)
SRR326279(GSM769509)
cytoplasmic fraction was isolated using PARIS. (cell line)
SRR039635(GSM518472)
THP1_nuc_sRNAs. (cell line)
SRR326282(GSM769512)
"Dicer mRNA was knocked down using siDicer, t. (cell line)
RoviraIPAgo2(Rovira)
total RNA. (ago2 breast)
SRR033722(GSM497067)
KMS12 cell line (KMS12). (B cell)
DRR000557(DRX000315)
"THP-1 whole cell RNA, after 3 day treatment . (cell line)
SRR553572(SRX182778)
source: Frontal Cortex. (Frontal Cortex)
SRR330907(SRX091745)
tissue: normal skindisease state: normal. (skin)
SRR033717(GSM497062)
Mentle Cell Lymphoma (MCL112). (B cell)
SRR330887(SRX091725)
tissue: skin psoriatic uninvolveddisease stat. (skin)
SRR037941(GSM510479)
293DroshaTN. (cell line)
SRR330885(SRX091723)
tissue: skin psoriatic uninvolveddisease stat. (skin)
SRR033712(GSM497057)
Burkitt Lymphoma (BL510). (B cell)
SRR330865(SRX091703)
tissue: skin psoriatic involveddisease state:. (skin)
SRR039616(GSM531979)
HBV(+) Distal Tissue Sample 1. (liver)
SRR039625(GSM531988)
HBV(-) HCV(-) HCC Tissue Sample. (liver)
TAX577746(Rovira)
total RNA. (breast)
DRR001484(DRX001038)
"Hela long nuclear cell fraction, control". (hela)
SRR330891(SRX091729)
tissue: skin psoriatic uninvolveddisease stat. (skin)
TAX577740(Rovira)
total RNA. (breast)
SRR330884(SRX091722)
tissue: skin psoriatic uninvolveddisease stat. (skin)
SRR189779(GSM714639)
cell line: HEK293clip variant: PAR-CLIPenzyma. (cell line)
SRR038854(GSM458537)
MM653. (cell line)
SRR207114(GSM721076)
"IP against AGO 1 & 2, RRP40 knockdown". (ago1/2 RRP40 cell line)
SRR390723(GSM850202)
total small RNA. (cell line)
SRR330868(SRX091706)
tissue: skin psoriatic involveddisease state:. (skin)
SRR060168(GSM565978)
5-8F_nucleus. (cell line)
SRR330869(SRX091707)
tissue: skin psoriatic involveddisease state:. (skin)
SRR039619(GSM531982)
HBV(+) HCC Tissue Sample 1. (liver)
SRR326280(GSM769510)
total cell content of unperturbed cells was s. (cell line)
SRR326281(GSM769511)
"Dicer mRNA was knocked down using siDicer, c. (cell line)
SRR039611(GSM531974)
Human Normal Liver Tissue Sample 1. (liver)
SRR191590(GSM715700)
48genomic small RNA (size selected RNA from t. (breast)
SRR330902(SRX091740)
tissue: skin psoriatic uninvolveddisease stat. (skin)
GSM359208(GSM359208)
hepg2_bindASP_hl_2. (cell line)
SRR342899(SRX096795)
small RNA seq of Left atrial tissue. (heart)
SRR330867(SRX091705)
tissue: skin psoriatic involveddisease state:. (skin)
SRR330889(SRX091727)
tissue: skin psoriatic uninvolveddisease stat. (skin)
SRR330880(SRX091718)
tissue: skin psoriatic involveddisease state:. (skin)
SRR189784GSM532889(GSM532889)
G576N. (cervix)
SRR094129(GSM651905)
small RNA(18-35nt)small RNA deep sequencing o. (uterus)
SRR191485(GSM715595)
123genomic small RNA (size selected RNA from . (breast)
DRR000555(DRX000313)
"THP-1 whole cell RNA, no treatment". (cell line)
SRR330888(SRX091726)
tissue: skin psoriatic uninvolveddisease stat. (skin)
SRR094130(GSM651906)
small RNA(18-35nt)small RNA deep sequencing o. (uterus)
SRR330892(SRX091730)
tissue: skin psoriatic uninvolveddisease stat. (skin)
SRR207111(GSM721073)
Whole cell RNA. (cell line)
SRR343332(GSM796035)
"KSHV (HHV8), EBV (HHV-4)". (cell line)
SRR207113(GSM721075)
IP against AGO 1 & 2. (ago1/2 cell line)
SRR040016(GSM532901)
G645N. (cervix)
DRR000556(DRX000314)
"THP-1 whole cell RNA, after 3 day treatment . (cell line)
SRR330922(SRX091760)
tissue: normal skindisease state: normal. (skin)
SRR191492(GSM715602)
154genomic small RNA (size selected RNA from . (breast)
SRR553573(SRX182779)
source: Cerebellum. (Cerebellum)
SRR033724(GSM497069)
L428 cell line (L428). (B cell)
GSM532874(GSM532874)
G699T. (cervix)
DRR000558(DRX000316)
"THP-1 whole cell RNA, after 3 day treatment . (cell line)
SRR207118(GSM721080)
RRP40 knockdown. (RRP40 cell line)
SRR444049(SRX128897)
Sample 9cDNABarcode: AF-PP-334: ACG CTC TTC C. (skin)
SRR343333(GSM796036)
KSHV (HHV8). (cell line)
SRR039617(GSM531980)
HBV(+) Adjacent Tissue Sample 1. (liver)
SRR033721(GSM497066)
Ly3 cell line (Ly3). (B cell)
SRR060982(GSM569186)
Human centrocyte [09-001]. (cell line)
SRR330875(SRX091713)
tissue: skin psoriatic involveddisease state:. (skin)
SRR039612(GSM531975)
Human Normal Liver Tissue Sample 2. (liver)
TAX577739(Rovira)
total RNA. (breast)
TAX577741(Rovira)
total RNA. (breast)
SRR189780(GSM714640)
cell line: HEK293clip variant: PAR-CLIPenzyma. (cell line)
SRR330861(SRX091699)
tissue: skin psoriatic involveddisease state:. (skin)
SRR330919(SRX091757)
tissue: normal skindisease state: normal. (skin)
SRR038859(GSM458542)
MM386. (cell line)
TAX577742(Rovira)
total RNA. (breast)
DRR001486(DRX001040)
"Hela long cytoplasmic cell fraction, LNA(+)". (hela)
SRR040006(GSM532891)
G601N. (cervix)
DRR000559(DRX000317)
"THP-1 whole cell RNA, no treatment". (cell line)
SRR033713(GSM497058)
Burkitt Lymphoma (BL115). (B cell)
GSM450608(GSM450608)
miRNA sequencing raw reads from post-mortem s. (brain)
TAX577579(Rovira)
total RNA. (breast)
SRR038860(GSM458543)
MM426. (cell line)
SRR330870(SRX091708)
tissue: skin psoriatic involveddisease state:. (skin)
GSM450600(GSM450600)
miRNA sequencing raw reads from post-mortem s. (brain)
SRR330894(SRX091732)
tissue: skin psoriatic uninvolveddisease stat. (skin)
SRR029132(GSM416761)
MB-MDA231. (cell line)
GSM450602(GSM450602)
miRNA sequencing raw reads from post-mortem s. (brain)
TAX577744(Rovira)
total RNA. (breast)
SRR039622(GSM531985)
HCV(+) Adjacent Tissue Sample. (liver)
SRR038863(GSM458546)
MM603. (cell line)
SRR015360(GSM380325)
Plasma B cells (PC137). (B cell)
SRR033728(GSM497073)
MALT (MALT413). (B cell)
SRR029131(GSM416760)
MCF7. (cell line)
SRR060986(GSM569190)
Human memory B cell [09-001]. (cell line)
TAX577453(Rovira)
total RNA. (breast)
GSM450605(GSM450605)
miRNA sequencing raw reads from post-mortem s. (brain)
SRR038856(GSM458539)
D11. (cell line)
SRR038862(GSM458545)
MM472. (cell line)
SRR330866(SRX091704)
tissue: skin psoriatic involveddisease state:. (skin)
SRR330878(SRX091716)
tissue: skin psoriatic involveddisease state:. (skin)
GSM450597(GSM450597)
miRNA sequencing raw reads from post-mortem s. (brain)
SRR363674(GSM830251)
cell type: human foreskin fibroblasts (HFF)tr. (fibroblast)
SRR330916(SRX091754)
tissue: normal skindisease state: normal. (skin)
TAX577745(Rovira)
total RNA. (breast)
SRR039637(GSM518474)
THP1_total_sRNAs. (cell line)
SRR033711(GSM497056)
GCB DLBCL (GCB110). (B cell)
SRR330859(SRX091697)
tissue: skin psoriatic involveddisease state:. (skin)
TAX577743(Rovira)
total RNA. (breast)
SRR191622(GSM715732)
175genomic small RNA (size selected RNA from . (breast)
SRR040015(GSM532900)
G623T. (cervix)
SRR037942(GSM510480)
293DroshaTN_cand5. (cell line)
SRR040027(GSM532912)
G220T. (cervix)
SRR330905(SRX091743)
tissue: normal skindisease state: normal. (skin)
SRR330883(SRX091721)
tissue: skin psoriatic uninvolveddisease stat. (skin)
SRR553575(SRX182781)
source: Kidney. (Kidney)
SRR040037(GSM532922)
G243T. (cervix)
SRR037943(GSM510481)
293DcrTN. (cell line)
SRR037937(GSM510475)
293cand2. (cell line)
SRR330901(SRX091739)
tissue: skin psoriatic uninvolveddisease stat. (skin)
SRR029130(GSM416759)
DLD2. (cell line)
SRR037934(GSM510472)
293cand4_rep3. (cell line)
SRR037939(GSM510477)
293cand5_rep1. (cell line)
SRR037944(GSM510482)
293DcrTN_cand5. (cell line)
SRR343336
............................................................................................................................................................CTTTGCTTTGGAGTCTCGGG................................................................................................................................................................................................................................................................................................................................... 2013.003.00-3.00-------------------------------------------------------------------------------------------------------------------------------
............................................................................................................................................................................................................................CCGCGGGGTGGGCGCGGA..................................................................................................................................................................................................................................................................... 182.750.00-----------------0.50---------------------0.25---------------------------------------------------------------------------0.50--0.25--0.250.250.25--0.250.25-
.......................................................................................................................TCCGATTCCACAGCCTGAAGACTATGA................................................................................................................................................................................................................................................................................................................................................................. 2712.002.00-----2.00---------------------------------------------------------------------------------------------------------------------------
..........................................................................................................TGAAGACTATGAGCTCGGAGGGTCC................................................................................................................................................................................................................................................................................................................................................................................ 2512.002.00-----2.00---------------------------------------------------------------------------------------------------------------------------
.........................................................................................................................................................GCTTTGGAGTCTCGGGCGG....................................................................................................................................................................................................................................................................................................................................... 1912.002.00--1.00----------------------------------------------------------------1.00-------------------------------------------------------------
...............................................................................................................................................................................CCGCGCCGGAAACTGGGC.................................................................................................................................................................................................................................................................................................................. 1812.002.00----2.00----------------------------------------------------------------------------------------------------------------------------
........................................................................................................TGAAGACTATGAGCTCGGAGGGTCCGC................................................................................................................................................................................................................................................................................................................................................................................ 2712.002.00-----2.00---------------------------------------------------------------------------------------------------------------------------
.............................................................................................................................................AGTCTCGGGCGGTGGCAGCTCCGA.............................................................................................................................................................................................................................................................................................................................................. 2411.001.00---------------------------------------------------1.00-----------------------------------------------------------------------------
............................................................................................................CTCGGGCGGTGGCAGCTCCGATTCCACAGCCTGAAGACTATGAGCTCGGAGGGT................................................................................................................................................................................................................................................................................................................................................. 5411.001.00------------------------1.00--------------------------------------------------------------------------------------------------------
........................................................................................................AAGACTATGAGCTCGGAGGGTCCGC.................................................................................................................................................................................................................................................................................................................................................................................. 2511.001.00-----1.00---------------------------------------------------------------------------------------------------------------------------
.................................................................................................................TCCACAGCCTGAAGACTATGAGCTCGG....................................................................................................................................................................................................................................................................................................................................................................... 2711.001.00-----1.00---------------------------------------------------------------------------------------------------------------------------
.............................................................................................................AGACTATGAGCTCGGAGGG................................................................................................................................................................................................................................................................................................................................................................................... 1911.001.001.00--------------------------------------------------------------------------------------------------------------------------------
.......................................................................................................................................................................................................................................................................................................................................................................................................................................................AGCTTGCTCCCTAGGAGGAC........................................ 2011.001.00------------------------------------------------------------------------------------------1.00--------------------------------------
....................................................................................................................................................CTTTGGAGTCTCGGGCGGTGGCA........................................................................................................................................................................................................................................................................................................................................ 2311.001.00----------------1.00----------------------------------------------------------------------------------------------------------------
...........................................................................................................................................................................GCCGGAAACTGGGCTTTG...................................................................................................................................................................................................................................................................................................................... 1811.001.00---1.00-----------------------------------------------------------------------------------------------------------------------------
...............................................................................................................................................................................................................................................................................................................................................................................GCGGCTGCAGCGGACAGA.................................................................................................................. 1811.001.00--------1.00------------------------------------------------------------------------------------------------------------------------
.......................................................................................................................................................TTGGAGTCTCGGGCGGTG.......................................................................................................................................................................................................................................................................................................................................... 1811.001.00----------------------------------------------------------------------------------------------1.00----------------------------------
..........................................................................................................................................................................................................................................GGCCGGAAGCGAGAACCG....................................................................................................................................................................................................................................................... 1811.001.00-----------------------------------------------------------------------------------------------------------------1.00---------------
.......................................................................................................................TTCCACAGCCTGAAGACTATGA...................................................................................................................................................................................................................................................................................................................................................................... 2211.001.00-----1.00---------------------------------------------------------------------------------------------------------------------------
.................................................................................................................................................AGTCTCGGGCGGTGGCAGCT.............................................................................................................................................................................................................................................................................................................................................. 2011.001.00-1.00-------------------------------------------------------------------------------------------------------------------------------
......................................................................................................................................................................................................CAATTCCTGAGATCCCTC........................................................................................................................................................................................................................................................................................... 1811.001.00----1.00----------------------------------------------------------------------------------------------------------------------------
...........................................................................................................TGAAGACTATGAGCTCGGAGGGTC................................................................................................................................................................................................................................................................................................................................................................................ 2411.001.00-----1.00---------------------------------------------------------------------------------------------------------------------------
....................................................................................................................................................................................................................................................................................................................................................................GGACAGAGCGCCTCTGCC............................................................................................................................. 1811.001.00-----------------------------------------------------------------------------------------------------------1.00---------------------
......................................................................................................................ACAGCCTGAAGACTATGAG.......................................................................................................................................................................................................................................................................................................................................................................... 1911.001.00-1.00-------------------------------------------------------------------------------------------------------------------------------
................................................................................................................GCCTGAAGACTATGAGCTCGGA............................................................................................................................................................................................................................................................................................................................................................................. 2211.001.00-----------------------------------------------------------------1.00---------------------------------------------------------------
........GGCGGGAGGGCCGCCCGCG........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................ 191.000.00----------1.00----------------------------------------------------------------------------------------------------------------------
....................................................................................................TATGAGCTCGGAGGGTCCGCGAAG....................................................................................................................................................................................................................................................................................................................................................................................... 2411.001.00-----1.00---------------------------------------------------------------------------------------------------------------------------
.............................................................................................................................................................GCTTTGGAGTCTCGG....................................................................................................................................................................................................................................................................................................................................... 1511.001.00-------1.00-------------------------------------------------------------------------------------------------------------------------
....................................................................................................................................................................................................................................................................................................................................................................................CCGCTGCAGCCGCGCGGAG............................................................................................................ 191.000.00--------------------------1.00------------------------------------------------------------------------------------------------------
................................................................................................................................................................................CCCAGTTTCCGGCGCGCG................................................................................................................................................................................................................................................................................................................. 181.000.00-------1.00-------------------------------------------------------------------------------------------------------------------------
.............................................................................................................AAGACTATGAGCTCGGAGGG.................................................................................................................................................................................................................................................................................................................................................................................. 2011.001.00------------------------------------1.00--------------------------------------------------------------------------------------------
..................................................................................................................................................TGCTTTGGAGTCTCGGGCGGTGGCAGC...................................................................................................................................................................................................................................................................................................................................... 2711.001.00-----1.00---------------------------------------------------------------------------------------------------------------------------
..........................................................................................................................................................GGCTTTGCTTTGGAGTCTCGGGCG................................................................................................................................................................................................................................................................................................................................. 2411.001.00---1.00-----------------------------------------------------------------------------------------------------------------------------
.................................................................................................................................................TGCTTTGGAGTCTCGGGCGGTGGCAGCT...................................................................................................................................................................................................................................................................................................................................... 2811.001.00----1.00----------------------------------------------------------------------------------------------------------------------------
...........................................................................................................................................................CTTTGCTTTGGAGTCTCGGGC................................................................................................................................................................................................................................................................................................................................... 2111.001.00---------------------------------------------1.00-----------------------------------------------------------------------------------
..............................................................................................................................................................................................................................................................................................................................................................................................................................GACCCCGACCAAGTTTGATG................................................................. 201.000.00----------------------------1.00----------------------------------------------------------------------------------------------------
..............................................................................................................AAGACTATGAGCTCGGAGG.................................................................................................................................................................................................................................................................................................................................................................................. 1911.001.00----------------1.00----------------------------------------------------------------------------------------------------------------
........................................................................................................................TCCGATTCCACAGCCTGAAGACTATG................................................................................................................................................................................................................................................................................................................................................................. 2611.001.00-----1.00---------------------------------------------------------------------------------------------------------------------------
...............................................................................................................................................................................CGCCGGAAACTGGGC..................................................................................................................................................................................................................................................................................................................... 1520.500.50----0.50----------------------------------------------------------------------------------------------------------------------------
............................................................................................................................................................................................................................CCGCGGGGTGGGCGCGGAA.................................................................................................................................................................................................................................................................... 190.500.00----------------------------------------------------------------------------------------------------------------------------0.250.25---
............................................................................................................................................................................................................................GCGCCCACCCCGCGG........................................................................................................................................................................................................................................................................ 1540.250.25---------------------------------------------------------------------------------------------------------------------0.25-----------
............................................................................................................................................................................................................................CCGCGGGGTGGGCGCGGG..................................................................................................................................................................................................................................................................... 180.250.00------------------------------------------------------------------------------------------------------------------------0.25--------
...................................................................CCCGCCTCCTGCGCG................................................................................................................................................................................................................................................................................................................................................................................................................................. 1560.170.17--------------------------------------------------------------------------------------------------------------------------------0.17