uc002jxd.1_intron_0_0_chr17_77769358

TCTATGGCCCCAAAAAGCGTGGACCCAAGCCCAAAACCTTCCTCCTCAAAGTAGGTTGGCAGTGTCCAATGGTGGAGGACCATGTTATGGAGTGATTTGTGGGAAGGGGGCTCTGAGGGCTGTGAGCCAATGGGGTGTCCACACATGTTGCCTATTTGTAATGTAGGAGGGAGTTCCCTGACAAGATGTCACCAAGTCAGTAGCAGCACCAACTGTGTCTGGGGGGACGGGCTTGGCCACACTAGAATTCCTTTACGCTCCCCCTCCCAAATGGACACAATAATCAAATGCAAAAAGTGTACTTTTTGCAAATGACTACTTCCAGCCAAATCTTCTACCTCTTCTCTCATCCTTCTACCTCTCAGCTCCAACAGCCATCCCACCCATTCATCCAGCCATCCACCCACCCACCCACCCACCCATCCATGCATCCATGTAGAAATTCCCAGGCATCATAGGGTAAAGATAGGAGGTCAGGGATAGAGGAGGAGTCCTGTGGGGGTGGACAGGGCCCTGCCCCACTCTTGAGACCATCTTCTCTCCTGCAGGCGCAGGCCAAGGCAAAGGCCAAAACTTACGAGTTTCGAAGTGACTCAGC
...................................................(((..((((...((((..((((((....((((((((..(((((((.((((....(((.((((((..(((.....)))..)))))).))).)))).)))))...))..)))))).))((((....)))).........))))))..((((..((((......))))..))))......))))...))))..)))..................................................................................................................................................................................................................................................................................................................................................................
..................................................51................................................................................................................................................................................................245...............................................................................................................................................................................................................................................................................................................................................................

Size

Perfect hit

Total Norm

Perfect Norm

SRR107296(GSM677703)
18-30nt fraction of small RNA. (cell line)

SRR387909(GSM843861)
specific-host: Homo sapienshost cell line: Su. (cell line)

SRR189782

SRR038852(GSM458535)
QF1160MB. (cell line)

SRR189779(GSM714639)
cell line: HEK293clip variant: PAR-CLIPenzyma. (cell line)

SRR029054(GSM402329)
MCF7_smallRNAseq. (cell line)

SRR033727(GSM497072)
HIV-positive DL (HIV412). (B cell)

TAX577744(Rovira)
total RNA. (breast)

GSM450602(GSM450602)
miRNA sequencing raw reads from post-mortem s. (brain)

SRR189784

SRR039620(GSM531983)
HBV(+) Adjacent Tissue Sample 2. (liver)

SRR040037(GSM532922)
G243T. (cervix)

SRR040011(GSM532896)
G529T. (cervix)

GSM532874(GSM532874)
G699T. (cervix)

SRR060984(GSM569188)
Human plasma cell [09-001]. (cell line)

SRR039617(GSM531980)
HBV(+) Adjacent Tissue Sample 1. (liver)

SRR039613(GSM531976)
Human Normal Liver Tissue Sample 3. (liver)

SRR040035(GSM532920)
G001T. (cervix)

SRR039623(GSM531986)
HCV(+) HCC Tissue Sample. (liver)

SRR326281(GSM769511)
"Dicer mRNA was knocked down using siDicer, c. (cell line)

RoviraIPAgo2(Rovira)
total RNA. (ago2 breast)

SRR040040(GSM532925)
G612N. (cervix)

SRR033718(GSM497063)
Multiple Myeloma (U266). (B cell)

SRR037936(GSM510474)
293cand1. (cell line)

GSM532876(GSM532876)
G547T. (cervix)

TAX577588(Rovira)
total RNA. (breast)

SRR330881(SRX091719)
tissue: skin psoriatic uninvolveddisease stat. (skin)

TAX577746(Rovira)
total RNA. (breast)

SRR189787

GSM450601(GSM450601)
miRNA sequencing raw reads from post-mortem s. (brain)

GSM450604(GSM450604)
miRNA sequencing raw reads from post-mortem s. (brain)

DRR000557(DRX000315)
"THP-1 whole cell RNA, after 3 day treatment . (cell line)

GSM532871(GSM532871)
G652N. (cervix)

SRR039618(GSM531981)
HBV(+) Side Tissue Sample 1. (liver)

SRR330891(SRX091729)
tissue: skin psoriatic uninvolveddisease stat. (skin)

SRR094131(GSM651907)
small RNA(18-35nt)small RNA deep sequencing o. (uterus)

SRR553573(SRX182779)
source: Cerebellum. (Cerebellum)

DRR000558(DRX000316)
"THP-1 whole cell RNA, after 3 day treatment . (cell line)

SRR444049(SRX128897)
Sample 9cDNABarcode: AF-PP-334: ACG CTC TTC C. (skin)

SRR343333(GSM796036)
KSHV (HHV8). (cell line)

SRR037876(GSM522374)
fibroblasts_cell_culture. (fibroblast)

SRR330911(SRX091749)
tissue: normal skindisease state: normal. (skin)

SRR033721(GSM497066)
Ly3 cell line (Ly3). (B cell)

SRR040007(GSM532892)
G601T. (cervix)

SRR040039(GSM532924)
G531T. (cervix)

SRR330919(SRX091757)
tissue: normal skindisease state: normal. (skin)

SRR444047(SRX128895)
Sample 27_1cDNABarcode: AF-PP-343: ACG CTC TT. (skin)

DRR001489(DRX001043)
"Hela short nuclear cell fraction, control". (hela)

SRR207115(GSM721077)
XRN1&2 knockdown. (XRN1/XRN2 cell line)

SRR343335

TAX577579(Rovira)
total RNA. (breast)

SRR040012(GSM532897)
G648N. (cervix)

GSM450600(GSM450600)
miRNA sequencing raw reads from post-mortem s. (brain)

SRR060168(GSM565978)
5-8F_nucleus. (cell line)

SRR033728(GSM497073)
MALT (MALT413). (B cell)

SRR039619(GSM531982)
HBV(+) HCC Tissue Sample 1. (liver)

SRR342898(SRX096794)
small RNA seq of Right atrial tissue. (heart)

SRR037944(GSM510482)
293DcrTN_cand5. (cell line)

SRR189778(GSM714638)
cell line: HEK293clip variant: PAR-CLIPenzyma. (cell line)

GSM450598(GSM450598)
miRNA sequencing raw reads from post-mortem s. (brain)

SRR039637(GSM518474)
THP1_total_sRNAs. (cell line)

TAX577743(Rovira)
total RNA. (breast)

DRR001488(DRX001042)
"Hela short nuclear cell fraction, LNA(+)". (hela)

SRR330906(SRX091744)
tissue: normal skindisease state: normal. (skin)

SRR330879(SRX091717)
tissue: skin psoriatic involveddisease state:. (skin)

..............................................................................................................................................................................................................................GGGGACGGGCTTGGCGGAA.....................................................................................................................................................................................................................................................................................................................................................................

25.00

0.00

9.00

4.00

6.00

2.00

1.00

..............................................................................................................................................................................................................................GGGGACGGGCTTGGCGGA......................................................................................................................................................................................................................................................................................................................................................................

10.00

0.00

1.00

4.00

1.00

..............................................................................................................................................................................................................................GGGGACGGGCTTGGCGGAC.....................................................................................................................................................................................................................................................................................................................................................................

3.00

0.00

1.00

.....................................................................................................................................................................GGAGGGAGTTCCCTGGATT..............................................................................................................................................................................................................................................................................................................................................................................................................................

2.00

0.00

1.00

.............................................................................................................................................................................................................................GGGGGACGGGCTTGGCGCT......................................................................................................................................................................................................................................................................................................................................................................

2.00

0.00

1.00

..............................................................................................................................................................................................................................GGGGACGGGCTTGGCGGG......................................................................................................................................................................................................................................................................................................................................................................

2.00

0.00

1.00

.....................................................................................................................................................................GGAGGGAGTTCCCTGGAAT..............................................................................................................................................................................................................................................................................................................................................................................................................................

2.00

0.00

1.00

..............................................................................................................................................................................................................................GGGGACGGGCTTGGCGGTA.....................................................................................................................................................................................................................................................................................................................................................................

1.00

0.00

1.00

..............................................................................................................................................................................................................................GGGGACGGGCTTGGCAGAA.....................................................................................................................................................................................................................................................................................................................................................................

1.00

0.00

1.00

..........CAAAAAGCGTGGACCCAA..........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................

1.00

...............................................................................................................................................................................................................................GGGACGGGCTTGGCCACAC....................................................................................................................................................................................................................................................................................................................................................................

1.00

....................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................GCGCAGGCCAAGGCAGAA................................

1.00

0.00

1.00

.............................................................................................................................................................................................................................GGGGGACGGGCTTGGCGAC......................................................................................................................................................................................................................................................................................................................................................................

1.00

0.00

1.00

..................................................................................................................................................................................................................................................................................................................................................................................................................................................................................TAGGAGGTCAGGGATCTCG.................................................................................................................

1.00

0.00

1.00

......................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................TGGACAGGGCCCTGCTCTG.............................................................................

1.00

0.00

1.00

..............................................................................................................CTCTGAGGGCTGTGAGCTCTG...................................................................................................................................................................................................................................................................................................................................................................................................................................................................................

1.00

0.00

1.00

..............................................................................................................................................................................................................................GGGGACGGGCTTGGCGGAG.....................................................................................................................................................................................................................................................................................................................................................................

1.00

0.00

1.00

.........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................TCAGGGATAGAGGAGGTATA.........................................................................................................

1.00

0.00

1.00

.............................................................................................................GCTCTGAGGGCTGTG..........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................

1.00

.........................................................................................................................................................................................................................TCTGGGGGGACGGGCTTGGCCACACC...................................................................................................................................................................................................................................................................................................................................................................

1.00

0.00

1.00

..............................................................................................................................................................................................................................GGGGACGGGCTTGGCGG.......................................................................................................................................................................................................................................................................................................................................................................

1.00

0.00

1.00

...........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................AGGGCCCTGCCCCACTCTTGAGACCATCTT.............................................................

1.00

.....................................................................................................................................................................GGAGGGAGTTCCCTGGATA..............................................................................................................................................................................................................................................................................................................................................................................................................................

1.00

0.00

1.00

.....................................................................................................................................................................GGAGGGAGTTCCCTGGAGA..............................................................................................................................................................................................................................................................................................................................................................................................................................

1.00

0.00

1.00

.................................................................................................................TGAGGGCTGTGAGCCAATGGGGTGT............................................................................................................................................................................................................................................................................................................................................................................................................................................................................

1.00

.............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................TGAGACCATCTTCTCGGG.......................................................

1.00

0.00

1.00

................................................................................................................CTGAGGGCTGTGAGCACG....................................................................................................................................................................................................................................................................................................................................................................................................................................................................................

1.00

0.00

1.00

.................................................................................................................................................................................................AAGTCAGTAGCAGCACCAAC.................................................................................................................................................................................................................................................................................................................................................................................................

1.00

................................................................................................................CTGAGGGCTGTGAGCCGAG...................................................................................................................................................................................................................................................................................................................................................................................................................................................................................

1.00

0.00

1.00

........................................................................................................................................................................................................TAGCAGCACCAACTGTTG............................................................................................................................................................................................................................................................................................................................................................................................

1.00

0.00

1.00

............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................TTGAGACCATCTTCTCTCCTG.....................................................

1.00

........................................................................TGGAGGACCATGTTAACT............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................

1.00

0.00

1.00

..................................................GTAGGTTGGCAGTGTGAA..................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................

1.00

0.00

1.00

.........................................................................................................................................................................................................................................................................................................................................ATCTTCTACCTCTTCTCTCAG........................................................................................................................................................................................................................................................

1.00

0.00

1.00

.......CCCCAAAAAGCGTGGACC.............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................

1.00

.............................................................................................................................................................................................................................GGGGGACGGGCTTGGTGGA......................................................................................................................................................................................................................................................................................................................................................................

1.00

0.00

1.00

.......CCCCAAAAAGCGTGGACCCAAG.........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................

1.00

...............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................ATAGAGGAGGAGTCCTG......................................................................................................

0.50

...............................................................................................................TCTGAGGGCTGTGAGCC......................................................................................................................................................................................................................................................................................................................................................................................................................................................................................

0.25

......................................TTCCTCCTCAAAGTAG................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................

0.25

........................................................................................................................................................................................................TAGCAGCACCAACTG...............................................................................................................................................................................................................................................................................................................................................................................................

0.17