ID: uc002jvq.2_intron_9_0_chr17_76437282_r.5p
GENE: (3)
chr17:76440486-76440735-


(1)
AGO1.ip
(1)
AGO1.ip OTHER.mut
(2)
AGO2.ip
(4)
B-CELL
(1)
BRAIN
(63)
BREAST
(32)
CELL-LINE
(21)
CERVIX
(9)
HEART
(3)
HELA
(1)
LIVER
(2)
OTHER
(1)
RRP40.ip
(69)
SKIN
(1)
TESTES
(1)
UTERUS
(1)
XRN.ip

Sense strand
CTGTGCATGGTGCGCTGCCTGCGGCCAGATCGCATGACCTACGCTATCAAGTGAGTGTCCCGCCGCGCCGGGGGCCCCGCCCCCGAGGCCCAGGCCTGATGGAAGCTTGACCGAGCGGCTGTGCTAGACTCTCTGTGGACTTGAGTTGATCCCCTGAACTTTTTTCTTCTCCCCATTTTACACAGAAACGAAACAGGGCTTAGAGGGGTAAATCATTTCACACAAAGTTCTTCGAGGACAGAGGCAGGAT
....................................................(((.(((..(((((..(((((((...))))))).((..(((((.........))))).))..))))).......))).))).((((....(((..((...............))..))).))))..........................................................................
..................................................51...........................................................................................................................176........................................................................
SizePerfect hitTotal NormPerfect NormSRR326279(GSM769509)
cytoplasmic fraction was isolated using PARIS. (cell line)
SRR326281(GSM769511)
"Dicer mRNA was knocked down using siDicer, c. (cell line)
SRR207110(GSM721072)
Nuclear RNA. (cell line)
SRR330913(SRX091751)
tissue: normal skindisease state: normal. (skin)
SRR330895(SRX091733)
tissue: skin psoriatic uninvolveddisease stat. (skin)
SRR330897(SRX091735)
tissue: skin psoriatic uninvolveddisease stat. (skin)
SRR330917(SRX091755)
tissue: normal skindisease state: normal. (skin)
SRR330896(SRX091734)
tissue: skin psoriatic uninvolveddisease stat. (skin)
SRR330890(SRX091728)
tissue: skin psoriatic uninvolveddisease stat. (skin)
SRR330922(SRX091760)
tissue: normal skindisease state: normal. (skin)
SRR330921(SRX091759)
tissue: normal skindisease state: normal. (skin)
SRR330906(SRX091744)
tissue: normal skindisease state: normal. (skin)
SRR330904(SRX091742)
tissue: normal skindisease state: normal. (skin)
SRR330912(SRX091750)
tissue: normal skindisease state: normal. (skin)
SRR330914(SRX091752)
tissue: normal skindisease state: normal. (skin)
SRR330916(SRX091754)
tissue: normal skindisease state: normal. (skin)
SRR330905(SRX091743)
tissue: normal skindisease state: normal. (skin)
SRR330887(SRX091725)
tissue: skin psoriatic uninvolveddisease stat. (skin)
SRR330874(SRX091712)
tissue: skin psoriatic involveddisease state:. (skin)
SRR330915(SRX091753)
tissue: normal skindisease state: normal. (skin)
SRR330902(SRX091740)
tissue: skin psoriatic uninvolveddisease stat. (skin)
SRR330892(SRX091730)
tissue: skin psoriatic uninvolveddisease stat. (skin)
SRR330879(SRX091717)
tissue: skin psoriatic involveddisease state:. (skin)
SRR330911(SRX091749)
tissue: normal skindisease state: normal. (skin)
SRR330891(SRX091729)
tissue: skin psoriatic uninvolveddisease stat. (skin)
SRR330899(SRX091737)
tissue: skin psoriatic uninvolveddisease stat. (skin)
SRR330903(SRX091741)
tissue: skin psoriatic uninvolveddisease stat. (skin)
SRR330889(SRX091727)
tissue: skin psoriatic uninvolveddisease stat. (skin)
SRR326282(GSM769512)
"Dicer mRNA was knocked down using siDicer, t. (cell line)
SRR330923(SRX091761)
tissue: normal skindisease state: normal. (skin)
SRR330920(SRX091758)
tissue: normal skindisease state: normal. (skin)
SRR330884(SRX091722)
tissue: skin psoriatic uninvolveddisease stat. (skin)
SRR330872(SRX091710)
tissue: skin psoriatic involveddisease state:. (skin)
SRR330894(SRX091732)
tissue: skin psoriatic uninvolveddisease stat. (skin)
SRR330893(SRX091731)
tissue: skin psoriatic uninvolveddisease stat. (skin)
SRR330908(SRX091746)
tissue: normal skindisease state: normal. (skin)
SRR330867(SRX091705)
tissue: skin psoriatic involveddisease state:. (skin)
SRR330873(SRX091711)
tissue: skin psoriatic involveddisease state:. (skin)
SRR330900(SRX091738)
tissue: skin psoriatic uninvolveddisease stat. (skin)
SRR330907(SRX091745)
tissue: normal skindisease state: normal. (skin)
SRR330866(SRX091704)
tissue: skin psoriatic involveddisease state:. (skin)
SRR330888(SRX091726)
tissue: skin psoriatic uninvolveddisease stat. (skin)
SRR330864(SRX091702)
tissue: skin psoriatic involveddisease state:. (skin)
SRR330880(SRX091718)
tissue: skin psoriatic involveddisease state:. (skin)
GSM532877(GSM532877)
G691N. (cervix)
SRR330901(SRX091739)
tissue: skin psoriatic uninvolveddisease stat. (skin)
SRR330898(SRX091736)
tissue: skin psoriatic uninvolveddisease stat. (skin)
SRR330861(SRX091699)
tissue: skin psoriatic involveddisease state:. (skin)
SRR330870(SRX091708)
tissue: skin psoriatic involveddisease state:. (skin)
SRR330869(SRX091707)
tissue: skin psoriatic involveddisease state:. (skin)
SRR342895(SRX096791)
small RNA seq of Left atrial tissue. (heart)
SRR326280(GSM769510)
total cell content of unperturbed cells was s. (cell line)
SRR330878(SRX091716)
tissue: skin psoriatic involveddisease state:. (skin)
SRR342894(SRX096790)
small RNA seq of Right atrial tissue. (heart)
SRR330865(SRX091703)
tissue: skin psoriatic involveddisease state:. (skin)
SRR330883(SRX091721)
tissue: skin psoriatic uninvolveddisease stat. (skin)
SRR342898(SRX096794)
small RNA seq of Right atrial tissue. (heart)
SRR553574(SRX182780)
source: Heart. (Heart)
SRR330882(SRX091720)
tissue: skin psoriatic uninvolveddisease stat. (skin)
SRR330868(SRX091706)
tissue: skin psoriatic involveddisease state:. (skin)
SRR207112(GSM721074)
RRP40 knockdown. (RRP40 cell line)
SRR330859(SRX091697)
tissue: skin psoriatic involveddisease state:. (skin)
SRR330871(SRX091709)
tissue: skin psoriatic involveddisease state:. (skin)
SRR330885(SRX091723)
tissue: skin psoriatic uninvolveddisease stat. (skin)
SRR330910(SRX091748)
tissue: normal skindisease state: normal. (skin)
SRR330877(SRX091715)
tissue: skin psoriatic involveddisease state:. (skin)
TAX577589(Rovira)
total RNA. (breast)
TAX577741(Rovira)
total RNA. (breast)
SRR342896(SRX096792)
small RNA seq of Right atrial tissue. (heart)
SRR330862(SRX091700)
tissue: skin psoriatic involveddisease state:. (skin)
TAX577743(Rovira)
total RNA. (breast)
SRR330860(SRX091698)
tissue: skin psoriatic involveddisease state:. (skin)
TAX577744(Rovira)
total RNA. (breast)
SRR330919(SRX091757)
tissue: normal skindisease state: normal. (skin)
SRR330863(SRX091701)
tissue: skin psoriatic involveddisease state:. (skin)
SRR330909(SRX091747)
tissue: normal skindisease state: normal. (skin)
SRR207115(GSM721077)
XRN1&2 knockdown. (XRN1/XRN2 cell line)
SRR038852(GSM458535)
QF1160MB. (cell line)
SRR330881(SRX091719)
tissue: skin psoriatic uninvolveddisease stat. (skin)
SRR330886(SRX091724)
tissue: skin psoriatic uninvolveddisease stat. (skin)
SRR207111(GSM721073)
Whole cell RNA. (cell line)
SRR342897(SRX096793)
small RNA seq of Left atrial tissue. (heart)
SRR330876(SRX091714)
tissue: skin psoriatic involveddisease state:. (skin)
SRR107296(GSM677703)
18-30nt fraction of small RNA. (cell line)
TAX577579(Rovira)
total RNA. (breast)
SRR553573(SRX182779)
source: Cerebellum. (Cerebellum)
SRR342900(SRX096796)
small RNA seq of Right atrial tissue. (heart)
SRR314796(SRX084354)
"Total RNA, fractionated (15-30nt)". (cell line)
SRR207116(GSM721078)
Nuclear RNA. (cell line)
TAX577746(Rovira)
total RNA. (breast)
TAX577738(Rovira)
total RNA. (breast)
TAX577588(Rovira)
total RNA. (breast)
GSM532883(GSM532883)
G871N. (cervix)
SRR191589(GSM715699)
69genomic small RNA (size selected RNA from t. (breast)
GSM532881(GSM532881)
G696N. (cervix)
TAX577590(Rovira)
total RNA. (breast)
TAX577742(Rovira)
total RNA. (breast)
SRR553576(SRX182782)
source: Testis. (testes)
SRR330858(SRX091696)
tissue: skin psoriatic involveddisease state:. (skin)
SRR330875(SRX091713)
tissue: skin psoriatic involveddisease state:. (skin)
SRR033712(GSM497057)
Burkitt Lymphoma (BL510). (B cell)
SRR342901(SRX096797)
small RNA seq of Left atrial tissue. (heart)
TAX577740(Rovira)
total RNA. (breast)
SRR191582(GSM715692)
95genomic small RNA (size selected RNA from t. (breast)
SRR040028(GSM532913)
G026N. (cervix)
RoviraIPAgo2(Rovira)
total RNA. (ago2 breast)
SRR342899(SRX096795)
small RNA seq of Left atrial tissue. (heart)
SRR207114(GSM721076)
"IP against AGO 1 & 2, RRP40 knockdown". (ago1/2 RRP40 cell line)
GSM532876(GSM532876)
G547T. (cervix)
DRR001488(DRX001042)
"Hela short nuclear cell fraction, LNA(+)". (hela)
GSM532889(GSM532889)
G576N. (cervix)
SRR040010(GSM532895)
G529N. (cervix)
SRR191554(GSM715664)
99genomic small RNA (size selected RNA from t. (breast)
SRR040029(GSM532914)
G026T. (cervix)
SRR033727(GSM497072)
HIV-positive DL (HIV412). (B cell)
SRR040014(GSM532899)
G623N. (cervix)
SRR191624(GSM715734)
31genomic small RNA (size selected RNA from t. (breast)
DRR001489(DRX001043)
"Hela short nuclear cell fraction, control". (hela)
SRR040012(GSM532897)
G648N. (cervix)
SRR191591(GSM715701)
53genomic small RNA (size selected RNA from t. (breast)
SRR033728(GSM497073)
MALT (MALT413). (B cell)
SRR444044(SRX128892)
Sample 5cDNABarcode: AF-PP-340: ACG CTC TTC C. (skin)
SRR330857(SRX091695)
tissue: skin psoriatic involveddisease state:. (skin)
TAX577745(Rovira)
total RNA. (breast)
SRR191409(GSM715519)
19genomic small RNA (size selected RNA from t. (breast)
SRR191614(GSM715724)
92genomic small RNA (size selected RNA from t. (breast)
SRR553572(SRX182778)
source: Frontal Cortex. (Frontal Cortex)
SRR191499(GSM715609)
6genomic small RNA (size selected RNA from to. (breast)
SRR207113(GSM721075)
IP against AGO 1 & 2. (ago1/2 cell line)
SRR191500(GSM715610)
7genomic small RNA (size selected RNA from to. (breast)
SRR037937(GSM510475)
293cand2. (cell line)
SRR189785SRR191578(GSM715688)
100genomic small RNA (size selected RNA from . (breast)
TAX577739(Rovira)
total RNA. (breast)
SRR191583(GSM715693)
97genomic small RNA (size selected RNA from t. (breast)
SRR191483(GSM715593)
11genomic small RNA (size selected RNA from t. (breast)
SRR191548(GSM715658)
101genomic small RNA (size selected RNA from . (breast)
SRR029132(GSM416761)
MB-MDA231. (cell line)
SRR040024(GSM532909)
G613N. (cervix)
SRR191479(GSM715589)
31genomic small RNA (size selected RNA from t. (breast)
SRR191489(GSM715599)
147genomic small RNA (size selected RNA from . (breast)
SRR191605(GSM715715)
76genomic small RNA (size selected RNA from t. (breast)
SRR040018(GSM532903)
G701N. (cervix)
SRR191488(GSM715598)
14genomic small RNA (size selected RNA from t. (breast)
SRR040030(GSM532915)
G013N. (cervix)
SRR040026(GSM532911)
G220N. (cervix)
SRR107297(GSM677704)
18-30nt fraction of small RNA. (cell line)
SRR191447(GSM715557)
142genomic small RNA (size selected RNA from . (breast)
SRR191590(GSM715700)
48genomic small RNA (size selected RNA from t. (breast)
DRR000557(DRX000315)
"THP-1 whole cell RNA, after 3 day treatment . (cell line)
DRR000556(DRX000314)
"THP-1 whole cell RNA, after 3 day treatment . (cell line)
SRR191476(GSM715586)
19genomic small RNA (size selected RNA from t. (breast)
SRR191588(GSM715698)
52genomic small RNA (size selected RNA from t. (breast)
SRR191630(GSM715740)
70genomic small RNA (size selected RNA from t. (breast)
SRR191509(GSM715619)
156genomic small RNA (size selected RNA from . (breast)
DRR000558(DRX000316)
"THP-1 whole cell RNA, after 3 day treatment . (cell line)
SRR191606(GSM715716)
84genomic small RNA (size selected RNA from t. (breast)
SRR191400(GSM715510)
37genomic small RNA (size selected RNA from t. (breast)
GSM416733(GSM416733)
HEK293. (cell line)
SRR191408(GSM715518)
88genomic small RNA (size selected RNA from t. (breast)
SRR191621(GSM715731)
16genomic small RNA (size selected RNA from t. (breast)
GSM956925PazD5(GSM956925)
"cell line: HEK293 cell linepassages: 15-20ip. (cell line)
SRR040031(GSM532916)
G013T. (cervix)
SRR029128(GSM416757)
H520. (cell line)
SRR037931(GSM510469)
293GFP. (cell line)
SRR095854(SRX039177)
"miRNA were isolated from FirstChoice Human B. (brain)
SRR191541(GSM715651)
63genomic small RNA (size selected RNA from t. (breast)
SRR191580(GSM715690)
103genomic small RNA (size selected RNA from . (breast)
SRR094132(GSM651908)
small RNA(18-35nt)small RNA deep sequencing o. (uterus)
GSM532890(GSM532890)
G576T. (cervix)
SRR191418(GSM715528)
40genomic small RNA (size selected RNA from t. (breast)
SRR191450(GSM715560)
145genomic small RNA (size selected RNA from . (breast)
SRR191559(GSM715669)
65genomic small RNA (size selected RNA from t. (breast)
SRR189780(GSM714640)
cell line: HEK293clip variant: PAR-CLIPenzyma. (cell line)
SRR191416(GSM715526)
34genomic small RNA (size selected RNA from t. (breast)
SRR191617(GSM715727)
104genomic small RNA (size selected RNA from . (breast)
SRR191634(GSM715744)
98genomic small RNA (size selected RNA from t. (breast)
SRR191534(GSM715644)
153genomic small RNA (size selected RNA from . (breast)
DRR001486(DRX001040)
"Hela long cytoplasmic cell fraction, LNA(+)". (hela)
SRR191417(GSM715527)
39genomic small RNA (size selected RNA from t. (breast)
SRR029126(GSM416755)
143B. (cell line)
DRR000559(DRX000317)
"THP-1 whole cell RNA, no treatment". (cell line)
SRR191600(GSM715710)
90genomic small RNA (size selected RNA from t. (breast)
SRR029130(GSM416759)
DLD2. (cell line)
SRR191474(GSM715584)
16genomic small RNA (size selected RNA from t. (breast)
SRR191440(GSM715550)
26genomic small RNA (size selected RNA from t. (breast)
SRR191461(GSM715571)
35genomic small RNA (size selected RNA from t. (breast)
SRR040032(GSM532917)
G603N. (cervix)
SRR191414(GSM715524)
31genomic small RNA (size selected RNA from t. (breast)
GSM532887(GSM532887)
G761N. (cervix)
SRR444054(SRX128902)
Sample 14cDNABarcode: AF-PP-342: ACG CTC TTC . (skin)
SRR038853(GSM458536)
MELB. (cell line)
SRR040020(GSM532905)
G699N_2. (cervix)
SRR191460(GSM715570)
33genomic small RNA (size selected RNA from t. (breast)
SRR191584(GSM715694)
98genomic small RNA (size selected RNA from t. (breast)
SRR037944(GSM510482)
293DcrTN_cand5. (cell line)
SRR191615(GSM715725)
94genomic small RNA (size selected RNA from t. (breast)
SRR039623(GSM531986)
HCV(+) HCC Tissue Sample. (liver)
SRR191497(GSM715607)
17genomic small RNA (size selected RNA from t. (breast)
SRR033711(GSM497056)
GCB DLBCL (GCB110). (B cell)
SRR191490(GSM715600)
15genomic small RNA (size selected RNA from t. (breast)
SRR191553(GSM715663)
96genomic small RNA (size selected RNA from t. (breast)
SRR029125(GSM416754)
U2OS. (cell line)
SRR444052(SRX128900)
Sample 12cDNABarcode: AF-PP-340: ACG CTC TTC . (skin)
SRR191594(GSM715704)
70genomic small RNA (size selected RNA from t. (breast)
GSM532874(GSM532874)
G699T. (cervix)
SRR387910(GSM843862)
antibody for ip: Ago2. (ago2 cell line)
GSM532885(GSM532885)
G850N. (cervix)
..........................................................CCCGCCGCGCCGGGGAGG..............................................................................................................................................................................1817568.000.004068.001353.00710.00671.00578.00483.00433.00419.00402.00396.00348.00365.00307.00287.00291.00249.00237.00225.00159.00222.00206.00183.00190.00192.00170.00175.00156.00162.00161.00160.00151.00149.00129.00140.00131.00130.00117.00135.00112.00113.00112.00106.0092.0086.0082.00103.0086.0099.0081.0075.0081.0077.0080.0082.0067.0058.0055.0058.0056.0044.0013.0042.0040.0040.0034.0033.0027.0016.0025.0030.0021.0023.0021.0017.0023.0024.0022.0017.0014.0012.001.0012.0016.008.006.0013.008.00-4.005.004.004.005.005.004.005.004.005.006.003.005.004.001.004.004.004.003.004.001.00-2.003.001.003.001.002.003.003.003.001.002.003.002.00-2.002.002.001.002.001.00--2.001.00-1.00-2.001.002.00-1.001.001.001.001.00-1.00----1.001.001.00---1.001.001.00-1.001.001.00----1.00----1.00-1.00--1.00----1.00--1.001.001.001.00-1.001.001.001.00-1.00-1.001.001.001.00-----
..........................................................CCCGCCGCGCCGGGGAG...............................................................................................................................................................................172612.000.00794.00242.0064.0067.0053.0088.0053.0059.0035.0040.0037.0025.0044.0047.0016.0029.0045.0025.0083.0022.0021.0040.0027.009.0024.0018.0026.0016.0021.0010.0024.0023.0020.0014.0015.0010.0014.008.0015.0015.008.0014.0012.0019.0020.008.0015.0014.0011.0015.0011.009.005.009.008.0019.007.004.005.009.002.009.006.003.007.005.008.0015.007.003.0010.005.004.005.003.003.001.00-2.003.002.001.00-2.006.001.002.00-1.003.001.003.002.002.001.00--1.00-2.00-1.00-1.00----1.00-1.00----------------1.00-1.00---1.002.00-----1.00-----1.00--1.001.00----1.00---------1.001.001.00---------1.00---1.00---1.00----------1.00-----------
..........................................................CCCGCCGCGCCGGGGAGGT.............................................................................................................................................................................191203.000.0012.005.006.0046.0072.0068.0043.0040.0044.0021.0017.0010.0016.0027.0030.0031.0021.0032.0033.0013.0022.0024.0021.0026.0021.0013.0022.0023.00-11.005.004.0021.0012.0010.007.0017.004.0013.009.0014.0011.0022.0017.0013.0010.0019.007.009.008.007.00-11.001.007.005.003.001.001.0010.0041.004.007.001.002.003.004.005.003.001.003.004.002.005.002.00-5.001.001.002.0012.002.00-5.001.00-3.00---1.00----1.002.00-----4.00---1.00--1.00--2.00-2.00----1.001.00--2.00------1.00----1.002.00-----------1.00--1.00----1.00-----------1.00-1.001.001.00--1.00--1.00-1.00-1.001.00--1.00-----------1.00---------
..........................................................CCCGCCGCGCCGGGGG................................................................................................................................................................................163364.67364.67276.3359.33----0.33--0.33------------------14.000.330.33----0.330.33---0.33----0.33-0.33---10.67----------0.33-----0.67-----------------------------------------------------0.33-------------------------------------------------------------------------------------
..........................................................CCCGCCGCGCCGGGGGGG..............................................................................................................................................................................18328.67364.6723.332.33----0.33-----------------0.33---0.67----------0.33----0.33------0.33-----0.33-----------------------------------------------------------------0.33------------------------------------------------------------------------------------
..........................................................CCCGCCGCGCCGGGGAGT..............................................................................................................................................................................1814.000.004.00-3.00---------4.00--------------------------1.00----2.00-------------------------------------------------------------------------------------------------------------------------------------------------------------------
..........................................................CCCGCCGCGCCGGGGAGC..............................................................................................................................................................................1813.000.005.001.00------1.00--1.00-1.00-1.00--1.00----------------1.00----------------------------------------------------------1.00-----------------------------------------------------------------------------------------------------------------
....................................................................CGGGGGCCCCGCCCCCGGA...................................................................................................................................................................1913.000.007.006.00--------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------
..........................................................CCCGCCGCGCCGGGGAATC.............................................................................................................................................................................1911.000.00---------------------------------------------------------------------------------------10.00-------------------------------------------------------------------------------------------------------1.00----------------
..........................................................CCCGCCGCGCCGGGGAGA..............................................................................................................................................................................1810.000.005.001.00-----1.00--1.00------------------1.00----------1.00-----------------------------------------------------------------------------------------------------------------------------------------------------------------------
..........................................................CCCGCCGCGCCGGGGAGGG.............................................................................................................................................................................199.000.00--1.00---------1.00---1.00-1.00-----1.00------------------------2.00----------2.00---------------------------------------------------------------------------------------------------------------------------------------------------
..........................................................CCCGCCGCGCCGGGGAGGA.............................................................................................................................................................................199.000.001.00---1.00---1.00-----2.00--------------------1.00-------1.001.00------------------------------------1.00------------------------------------------------------------------------------------------------------------------------------
..........................................................CCCGCCGCGCCGGGGGG...............................................................................................................................................................................1738.00364.675.671.67--0.33-------------------------------------------------------------0.33---------------------------------------------------------------------------------------------------------------------------------------------
..........................................................CCCGCCGCGCCGGGGATG..............................................................................................................................................................................188.000.002.00-2.00----------------------------------------2.001.00---------------------------------------1.00---------------------------------------------------------------------------------------------------------------------------
..........................................................CCCGCCGCGCCGGGGAGGC.............................................................................................................................................................................197.000.001.00-2.001.00---1.00-----------------------------1.00-------------------------------------1.00------------------------------------------------------------------------------------------------------------------------------------
.................................................................CGCCGGGGGCCCCGCCGGGG.....................................................................................................................................................................206.000.00-----1.00---------1.001.00-----------------------------1.00-----------1.00-------------1.00---------------------------------------------------------------------------------------------------------------------------------------
..........................................................CCCGCCGCGCCGGGGAAG..............................................................................................................................................................................185.000.00-1.00--------------------1.00----1.00----------------1.00--------------------------------------------------------------------------1.00----------------------------------------------------------------------------------------
..........................................................CCCGCCGCGCCGGGGAT...............................................................................................................................................................................174.000.001.003.00--------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------
....................................................................CGGGGGCCCCGCCCCCGG....................................................................................................................................................................184.000.002.002.00--------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------
.....................................................................GGGGGCCCCGCCCCCG.....................................................................................................................................................................1633.333.332.000.67--------------------------0.67-----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------
..........................................................CCCGCCGCGCCGGGGACGG.............................................................................................................................................................................193.000.001.00----------------------------------------1.00--------------1.00-------------------------------------------------------------------------------------------------------------------------------------------------------
.....................................................................GGGGGCCCCGCCCCCCG....................................................................................................................................................................1762.830.171.831.00--------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------
..................................................................................................................................................................TTTCTTCTCCCCATTATG......................................................................182.000.00-----------------------------------------------------------------------------------------------------------------------------------2.00----------------------------------------------------------------------------
.........................................................TCCCGCCGCGCCGGGGG................................................................................................................................................................................1712.002.001.001.00--------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------
..........................................................CCCGCCGCGCCGGGGACA..............................................................................................................................................................................182.000.00--------------------------------------------2.00-------------------------------------------------------------------------------------------------------------------------------------------------------------------
..........................................................CCCGCCGCGCCGGGGAGCT.............................................................................................................................................................................192.000.00-------------------1.00-----------------------------------------------------------------------------------------------------------------------------------------1.00--------------------------------------------------
.....................................................................GGGGGCCCCGCCCCCCCG...................................................................................................................................................................1861.670.171.500.17--------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------
.........................................................TCCCGCCGCGCCGGGGAGG..............................................................................................................................................................................1931.671.00------------------------------------------------------------------0.33-----0.67-------------------------------0.33-----------------------------------------------------------------------------------------------------0.33-
..........................................................CCCGCCGCGCCGGGGGCA..............................................................................................................................................................................1831.671.000.671.00--------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------
.........................................................TCCCGCCGCGCCGGGGA................................................................................................................................................................................1731.671.000.670.330.33-----------------------------------------0.33-------------------------------------------------------------------------------------------------------------------------------------------------------------------
..........................................................CCCGCCGCGCCGGGGGGC..............................................................................................................................................................................1831.67364.671.330.33--------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------
..........................................................CCCGCCGCGCCGGGGGGGGG............................................................................................................................................................................2031.67364.671.000.33----------0.33---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------
...........................................................................CCCGCCCCCGAGGCCTCGG............................................................................................................................................................191.000.00-1.00--------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------
.........................................................TCCCGCCGCGCCGGGG.................................................................................................................................................................................1631.001.000.33----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------0.67----
..........................................................CCCGCCGCGCCGGGGGGGG.............................................................................................................................................................................1931.00364.670.33----0.67----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------
.............................................................................................................................................................ACTTTTTTCTTCTCCCCACCC........................................................................211.000.00-----------------------------------------------------------------------------------------------------------------------------------------------------------------------------1.00----------------------------------
..................................................................GCCGGGGGCCCCGCCCCGGCG...................................................................................................................................................................211.000.00-1.00--------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------
..................................................................GCCGGGGGCCCCGCCCCGGCC...................................................................................................................................................................211.000.001.00---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------
..........................................................CCCGCCGCGCCGGGGAAAA.............................................................................................................................................................................191.000.00--1.00-------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------
..........................................................CCCGCCGCGCCGGGGAGAT.............................................................................................................................................................................191.000.00------------------------------------------------------------1.00---------------------------------------------------------------------------------------------------------------------------------------------------
................................................................GCGCCGGGGGCCCCGCCCG.......................................................................................................................................................................191.000.00------------------------------------------------------------------------------------------------------------------------------------------1.00---------------------------------------------------------------------
..........................................................CCCGCCGCGCCGGGGGC...............................................................................................................................................................................1731.001.000.330.67--------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------
...............................................................CGCGCCGGGGGCCCCGGCA........................................................................................................................................................................191.000.00-------------------------------------------------------------------------------------------------------------------1.00--------------------------------------------------------------------------------------------
.................................................................................................................................................................................................CAGGGCTTAGAGGGGTAAATCA...................................2211.001.00---------------------------------------------------------------1.00------------------------------------------------------------------------------------------------------------------------------------------------
............................................................CGCCGCGCCGGGGGCCCGGGG.........................................................................................................................................................................211.000.00----1.00-----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------
................................................................GCGCCGGGGGCCCCGCCGGGG.....................................................................................................................................................................211.000.00-----------------------------------1.00----------------------------------------------------------------------------------------------------------------------------------------------------------------------------
...................................................................CCGGGGGCCCCGCCCCCGG....................................................................................................................................................................191.000.00-1.00--------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------
...........................................................CCGCCGCGCCGGGGG................................................................................................................................................................................1580.750.75-0.25-----0.25---------0.12-----------------0.12----------------------------------------------------------------------------------------------------------------------------------------------------------------------------
..........................................................CCCGCCGCGCCGGGGGA...............................................................................................................................................................................1730.67364.670.33---------------------------0.33-----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------
..........................................................CCCGCCGCGCCGGGGGGGTG............................................................................................................................................................................2030.67364.670.33-----------------------------------------------------------------------------------0.33---------------------------------------------------------------------------------------------------------------------------
..........................................................CCCGCCGCGCCGGGGGGA..............................................................................................................................................................................1830.67364.670.330.33--------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------
.........................................................TCCCGCCGCGCCGGGGAG...............................................................................................................................................................................1830.671.000.330.33--------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------
..........................................................CCCGCCGCGCCGGGGGGCG.............................................................................................................................................................................1930.67364.67-0.33-----------------------------------------------------------------0.33--------------------------------------------------------------------------------------------------------------------------------------------
.....................................................................GGGGGCCCCGCCCCCCCCG..................................................................................................................................................................1960.500.170.170.33--------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------
.........................................................TCCCGCCGCGCCGGG..................................................................................................................................................................................1560.500.50---------------------------------------------------------0.33-----------------------------------------0.17------------------------------------------------------------------------------------------------------------
.....................................................................GGGGGCCCCGCCCCCGGGGA.................................................................................................................................................................2030.333.33-0.33--------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------
..........................................................CCCGCCGCGCCGGGGGGT..............................................................................................................................................................................1830.33364.67---------------0.33------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------
..........................................................CCCGCCGCGCCGGGGGAGG.............................................................................................................................................................................1930.33364.67-0.33--------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------
..........................................................CCCGCCGCGCCGGGGGGGCC............................................................................................................................................................................2030.33364.67-0.33--------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------
..........................................................CCCGCCGCGCCGGGGGAGCG............................................................................................................................................................................2030.33364.670.33---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------
..........................................................CCCGCCGCGCCGGGGGGCGG............................................................................................................................................................................2030.33364.67---------0.33------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------
..........................................................CCCGCCGCGCCGGGGGAGAC............................................................................................................................................................................2030.33364.67-------------0.33--------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------
...........................................................CCGCCGCGCCGGGGGGGT.............................................................................................................................................................................1880.250.75----------------------------------------------------------------------0.12----------------------------------------------------------------------------------------------------------------------------------------0.12
...........................................................CCGCCGCGCCGGGGGGGTG............................................................................................................................................................................1980.250.75----------------------------------------------------------------------0.12------0.12----------------------------------------------------------------------------------------------------------------------------------
.....................................................................GGGGGCCCCGCCCCCCCGA..................................................................................................................................................................1960.170.170.17---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------
.....................................................................GGGGGCCCCGCCCCCCGA...................................................................................................................................................................1860.170.170.17---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------
.....................................................................GGGGGCCCCGCCCCCC.....................................................................................................................................................................1660.170.17----------------------------0.17-----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------
.....................................................................GGGGGCCCCGCCCCC......................................................................................................................................................................1560.170.170.17---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------
...........................................................CCGCCGCGCCGGGGGGGA.............................................................................................................................................................................1880.120.75---------------------------0.12------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------
...........................................................CCGCCGCGCCGGGGGGTGT............................................................................................................................................................................1980.120.75-----------------------------------------------------0.12----------------------------------------------------------------------------------------------------------------------------------------------------------
...........................................................CCGCCGCGCCGGGGGGG..............................................................................................................................................................................1780.120.750.12---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------
...........................................................CCGCCGCGCCGGGGGGGG.............................................................................................................................................................................1880.120.75-----------------------0.12----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------

Antisense strand
CTGTGCATGGTGCGCTGCCTGCGGCCAGATCGCATGACCTACGCTATCAAGTGAGTGTCCCGCCGCGCCGGGGGCCCCGCCCCCGAGGCCCAGGCCTGATGGAAGCTTGACCGAGCGGCTGTGCTAGACTCTCTGTGGACTTGAGTTGATCCCCTGAACTTTTTTCTTCTCCCCATTTTACACAGAAACGAAACAGGGCTTAGAGGGGTAAATCATTTCACACAAAGTTCTTCGAGGACAGAGGCAGGAT
....................................................(((.(((..(((((..(((((((...))))))).((..(((((.........))))).))..))))).......))).))).((((....(((..((...............))..))).))))..........................................................................
..................................................51...........................................................................................................................176........................................................................
SizePerfect hitTotal NormPerfect NormSRR326279(GSM769509)
cytoplasmic fraction was isolated using PARIS. (cell line)
SRR326281(GSM769511)
"Dicer mRNA was knocked down using siDicer, c. (cell line)
SRR207110(GSM721072)
Nuclear RNA. (cell line)
SRR330913(SRX091751)
tissue: normal skindisease state: normal. (skin)
SRR330895(SRX091733)
tissue: skin psoriatic uninvolveddisease stat. (skin)
SRR330897(SRX091735)
tissue: skin psoriatic uninvolveddisease stat. (skin)
SRR330917(SRX091755)
tissue: normal skindisease state: normal. (skin)
SRR330896(SRX091734)
tissue: skin psoriatic uninvolveddisease stat. (skin)
SRR330890(SRX091728)
tissue: skin psoriatic uninvolveddisease stat. (skin)
SRR330922(SRX091760)
tissue: normal skindisease state: normal. (skin)
SRR330921(SRX091759)
tissue: normal skindisease state: normal. (skin)
SRR330906(SRX091744)
tissue: normal skindisease state: normal. (skin)
SRR330904(SRX091742)
tissue: normal skindisease state: normal. (skin)
SRR330912(SRX091750)
tissue: normal skindisease state: normal. (skin)
SRR330914(SRX091752)
tissue: normal skindisease state: normal. (skin)
SRR330916(SRX091754)
tissue: normal skindisease state: normal. (skin)
SRR330905(SRX091743)
tissue: normal skindisease state: normal. (skin)
SRR330887(SRX091725)
tissue: skin psoriatic uninvolveddisease stat. (skin)
SRR330874(SRX091712)
tissue: skin psoriatic involveddisease state:. (skin)
SRR330915(SRX091753)
tissue: normal skindisease state: normal. (skin)
SRR330902(SRX091740)
tissue: skin psoriatic uninvolveddisease stat. (skin)
SRR330892(SRX091730)
tissue: skin psoriatic uninvolveddisease stat. (skin)
SRR330879(SRX091717)
tissue: skin psoriatic involveddisease state:. (skin)
SRR330911(SRX091749)
tissue: normal skindisease state: normal. (skin)
SRR330891(SRX091729)
tissue: skin psoriatic uninvolveddisease stat. (skin)
SRR330899(SRX091737)
tissue: skin psoriatic uninvolveddisease stat. (skin)
SRR330903(SRX091741)
tissue: skin psoriatic uninvolveddisease stat. (skin)
SRR330889(SRX091727)
tissue: skin psoriatic uninvolveddisease stat. (skin)
SRR326282(GSM769512)
"Dicer mRNA was knocked down using siDicer, t. (cell line)
SRR330923(SRX091761)
tissue: normal skindisease state: normal. (skin)
SRR330920(SRX091758)
tissue: normal skindisease state: normal. (skin)
SRR330884(SRX091722)
tissue: skin psoriatic uninvolveddisease stat. (skin)
SRR330872(SRX091710)
tissue: skin psoriatic involveddisease state:. (skin)
SRR330894(SRX091732)
tissue: skin psoriatic uninvolveddisease stat. (skin)
SRR330893(SRX091731)
tissue: skin psoriatic uninvolveddisease stat. (skin)
SRR330908(SRX091746)
tissue: normal skindisease state: normal. (skin)
SRR330867(SRX091705)
tissue: skin psoriatic involveddisease state:. (skin)
SRR330873(SRX091711)
tissue: skin psoriatic involveddisease state:. (skin)
SRR330900(SRX091738)
tissue: skin psoriatic uninvolveddisease stat. (skin)
SRR330907(SRX091745)
tissue: normal skindisease state: normal. (skin)
SRR330866(SRX091704)
tissue: skin psoriatic involveddisease state:. (skin)
SRR330888(SRX091726)
tissue: skin psoriatic uninvolveddisease stat. (skin)
SRR330864(SRX091702)
tissue: skin psoriatic involveddisease state:. (skin)
SRR330880(SRX091718)
tissue: skin psoriatic involveddisease state:. (skin)
GSM532877(GSM532877)
G691N. (cervix)
SRR330901(SRX091739)
tissue: skin psoriatic uninvolveddisease stat. (skin)
SRR330898(SRX091736)
tissue: skin psoriatic uninvolveddisease stat. (skin)
SRR330861(SRX091699)
tissue: skin psoriatic involveddisease state:. (skin)
SRR330870(SRX091708)
tissue: skin psoriatic involveddisease state:. (skin)
SRR330869(SRX091707)
tissue: skin psoriatic involveddisease state:. (skin)
SRR342895(SRX096791)
small RNA seq of Left atrial tissue. (heart)
SRR326280(GSM769510)
total cell content of unperturbed cells was s. (cell line)
SRR330878(SRX091716)
tissue: skin psoriatic involveddisease state:. (skin)
SRR342894(SRX096790)
small RNA seq of Right atrial tissue. (heart)
SRR330865(SRX091703)
tissue: skin psoriatic involveddisease state:. (skin)
SRR330883(SRX091721)
tissue: skin psoriatic uninvolveddisease stat. (skin)
SRR342898(SRX096794)
small RNA seq of Right atrial tissue. (heart)
SRR553574(SRX182780)
source: Heart. (Heart)
SRR330882(SRX091720)
tissue: skin psoriatic uninvolveddisease stat. (skin)
SRR330868(SRX091706)
tissue: skin psoriatic involveddisease state:. (skin)
SRR207112(GSM721074)
RRP40 knockdown. (RRP40 cell line)
SRR330859(SRX091697)
tissue: skin psoriatic involveddisease state:. (skin)
SRR330871(SRX091709)
tissue: skin psoriatic involveddisease state:. (skin)
SRR330885(SRX091723)
tissue: skin psoriatic uninvolveddisease stat. (skin)
SRR330910(SRX091748)
tissue: normal skindisease state: normal. (skin)
SRR330877(SRX091715)
tissue: skin psoriatic involveddisease state:. (skin)
TAX577589(Rovira)
total RNA. (breast)
TAX577741(Rovira)
total RNA. (breast)
SRR342896(SRX096792)
small RNA seq of Right atrial tissue. (heart)
SRR330862(SRX091700)
tissue: skin psoriatic involveddisease state:. (skin)
TAX577743(Rovira)
total RNA. (breast)
SRR330860(SRX091698)
tissue: skin psoriatic involveddisease state:. (skin)
TAX577744(Rovira)
total RNA. (breast)
SRR330919(SRX091757)
tissue: normal skindisease state: normal. (skin)
SRR330863(SRX091701)
tissue: skin psoriatic involveddisease state:. (skin)
SRR330909(SRX091747)
tissue: normal skindisease state: normal. (skin)
SRR207115(GSM721077)
XRN1&2 knockdown. (XRN1/XRN2 cell line)
SRR038852(GSM458535)
QF1160MB. (cell line)
SRR330881(SRX091719)
tissue: skin psoriatic uninvolveddisease stat. (skin)
SRR330886(SRX091724)
tissue: skin psoriatic uninvolveddisease stat. (skin)
SRR207111(GSM721073)
Whole cell RNA. (cell line)
SRR342897(SRX096793)
small RNA seq of Left atrial tissue. (heart)
SRR330876(SRX091714)
tissue: skin psoriatic involveddisease state:. (skin)
SRR107296(GSM677703)
18-30nt fraction of small RNA. (cell line)
TAX577579(Rovira)
total RNA. (breast)
SRR553573(SRX182779)
source: Cerebellum. (Cerebellum)
SRR342900(SRX096796)
small RNA seq of Right atrial tissue. (heart)
SRR314796(SRX084354)
"Total RNA, fractionated (15-30nt)". (cell line)
SRR207116(GSM721078)
Nuclear RNA. (cell line)
TAX577746(Rovira)
total RNA. (breast)
TAX577738(Rovira)
total RNA. (breast)
TAX577588(Rovira)
total RNA. (breast)
GSM532883(GSM532883)
G871N. (cervix)
SRR191589(GSM715699)
69genomic small RNA (size selected RNA from t. (breast)
GSM532881(GSM532881)
G696N. (cervix)
TAX577590(Rovira)
total RNA. (breast)
TAX577742(Rovira)
total RNA. (breast)
SRR553576(SRX182782)
source: Testis. (testes)
SRR330858(SRX091696)
tissue: skin psoriatic involveddisease state:. (skin)
SRR330875(SRX091713)
tissue: skin psoriatic involveddisease state:. (skin)
SRR033712(GSM497057)
Burkitt Lymphoma (BL510). (B cell)
SRR342901(SRX096797)
small RNA seq of Left atrial tissue. (heart)
TAX577740(Rovira)
total RNA. (breast)
SRR191582(GSM715692)
95genomic small RNA (size selected RNA from t. (breast)
SRR040028(GSM532913)
G026N. (cervix)
RoviraIPAgo2(Rovira)
total RNA. (ago2 breast)
SRR342899(SRX096795)
small RNA seq of Left atrial tissue. (heart)
SRR207114(GSM721076)
"IP against AGO 1 & 2, RRP40 knockdown". (ago1/2 RRP40 cell line)
GSM532876(GSM532876)
G547T. (cervix)
DRR001488(DRX001042)
"Hela short nuclear cell fraction, LNA(+)". (hela)
GSM532889(GSM532889)
G576N. (cervix)
SRR040010(GSM532895)
G529N. (cervix)
SRR191554(GSM715664)
99genomic small RNA (size selected RNA from t. (breast)
SRR040029(GSM532914)
G026T. (cervix)
SRR033727(GSM497072)
HIV-positive DL (HIV412). (B cell)
SRR040014(GSM532899)
G623N. (cervix)
SRR191624(GSM715734)
31genomic small RNA (size selected RNA from t. (breast)
DRR001489(DRX001043)
"Hela short nuclear cell fraction, control". (hela)
SRR040012(GSM532897)
G648N. (cervix)
SRR191591(GSM715701)
53genomic small RNA (size selected RNA from t. (breast)
SRR033728(GSM497073)
MALT (MALT413). (B cell)
SRR444044(SRX128892)
Sample 5cDNABarcode: AF-PP-340: ACG CTC TTC C. (skin)
SRR330857(SRX091695)
tissue: skin psoriatic involveddisease state:. (skin)
TAX577745(Rovira)
total RNA. (breast)
SRR191409(GSM715519)
19genomic small RNA (size selected RNA from t. (breast)
SRR191614(GSM715724)
92genomic small RNA (size selected RNA from t. (breast)
SRR553572(SRX182778)
source: Frontal Cortex. (Frontal Cortex)
SRR191499(GSM715609)
6genomic small RNA (size selected RNA from to. (breast)
SRR207113(GSM721075)
IP against AGO 1 & 2. (ago1/2 cell line)
SRR191500(GSM715610)
7genomic small RNA (size selected RNA from to. (breast)
SRR037937(GSM510475)
293cand2. (cell line)
SRR189785SRR191578(GSM715688)
100genomic small RNA (size selected RNA from . (breast)
TAX577739(Rovira)
total RNA. (breast)
SRR191583(GSM715693)
97genomic small RNA (size selected RNA from t. (breast)
SRR191483(GSM715593)
11genomic small RNA (size selected RNA from t. (breast)
SRR191548(GSM715658)
101genomic small RNA (size selected RNA from . (breast)
SRR029132(GSM416761)
MB-MDA231. (cell line)
SRR040024(GSM532909)
G613N. (cervix)
SRR191479(GSM715589)
31genomic small RNA (size selected RNA from t. (breast)
SRR191489(GSM715599)
147genomic small RNA (size selected RNA from . (breast)
SRR191605(GSM715715)
76genomic small RNA (size selected RNA from t. (breast)
SRR040018(GSM532903)
G701N. (cervix)
SRR191488(GSM715598)
14genomic small RNA (size selected RNA from t. (breast)
SRR040030(GSM532915)
G013N. (cervix)
SRR040026(GSM532911)
G220N. (cervix)
SRR107297(GSM677704)
18-30nt fraction of small RNA. (cell line)
SRR191447(GSM715557)
142genomic small RNA (size selected RNA from . (breast)
SRR191590(GSM715700)
48genomic small RNA (size selected RNA from t. (breast)
DRR000557(DRX000315)
"THP-1 whole cell RNA, after 3 day treatment . (cell line)
DRR000556(DRX000314)
"THP-1 whole cell RNA, after 3 day treatment . (cell line)
SRR191476(GSM715586)
19genomic small RNA (size selected RNA from t. (breast)
SRR191588(GSM715698)
52genomic small RNA (size selected RNA from t. (breast)
SRR191630(GSM715740)
70genomic small RNA (size selected RNA from t. (breast)
SRR191509(GSM715619)
156genomic small RNA (size selected RNA from . (breast)
DRR000558(DRX000316)
"THP-1 whole cell RNA, after 3 day treatment . (cell line)
SRR191606(GSM715716)
84genomic small RNA (size selected RNA from t. (breast)
SRR191400(GSM715510)
37genomic small RNA (size selected RNA from t. (breast)
GSM416733(GSM416733)
HEK293. (cell line)
SRR191408(GSM715518)
88genomic small RNA (size selected RNA from t. (breast)
SRR191621(GSM715731)
16genomic small RNA (size selected RNA from t. (breast)
GSM956925PazD5(GSM956925)
"cell line: HEK293 cell linepassages: 15-20ip. (cell line)
SRR040031(GSM532916)
G013T. (cervix)
SRR029128(GSM416757)
H520. (cell line)
SRR037931(GSM510469)
293GFP. (cell line)
SRR095854(SRX039177)
"miRNA were isolated from FirstChoice Human B. (brain)
SRR191541(GSM715651)
63genomic small RNA (size selected RNA from t. (breast)
SRR191580(GSM715690)
103genomic small RNA (size selected RNA from . (breast)
SRR094132(GSM651908)
small RNA(18-35nt)small RNA deep sequencing o. (uterus)
GSM532890(GSM532890)
G576T. (cervix)
SRR191418(GSM715528)
40genomic small RNA (size selected RNA from t. (breast)
SRR191450(GSM715560)
145genomic small RNA (size selected RNA from . (breast)
SRR191559(GSM715669)
65genomic small RNA (size selected RNA from t. (breast)
SRR189780(GSM714640)
cell line: HEK293clip variant: PAR-CLIPenzyma. (cell line)
SRR191416(GSM715526)
34genomic small RNA (size selected RNA from t. (breast)
SRR191617(GSM715727)
104genomic small RNA (size selected RNA from . (breast)
SRR191634(GSM715744)
98genomic small RNA (size selected RNA from t. (breast)
SRR191534(GSM715644)
153genomic small RNA (size selected RNA from . (breast)
DRR001486(DRX001040)
"Hela long cytoplasmic cell fraction, LNA(+)". (hela)
SRR191417(GSM715527)
39genomic small RNA (size selected RNA from t. (breast)
SRR029126(GSM416755)
143B. (cell line)
DRR000559(DRX000317)
"THP-1 whole cell RNA, no treatment". (cell line)
SRR191600(GSM715710)
90genomic small RNA (size selected RNA from t. (breast)
SRR029130(GSM416759)
DLD2. (cell line)
SRR191474(GSM715584)
16genomic small RNA (size selected RNA from t. (breast)
SRR191440(GSM715550)
26genomic small RNA (size selected RNA from t. (breast)
SRR191461(GSM715571)
35genomic small RNA (size selected RNA from t. (breast)
SRR040032(GSM532917)
G603N. (cervix)
SRR191414(GSM715524)
31genomic small RNA (size selected RNA from t. (breast)
GSM532887(GSM532887)
G761N. (cervix)
SRR444054(SRX128902)
Sample 14cDNABarcode: AF-PP-342: ACG CTC TTC . (skin)
SRR038853(GSM458536)
MELB. (cell line)
SRR040020(GSM532905)
G699N_2. (cervix)
SRR191460(GSM715570)
33genomic small RNA (size selected RNA from t. (breast)
SRR191584(GSM715694)
98genomic small RNA (size selected RNA from t. (breast)
SRR037944(GSM510482)
293DcrTN_cand5. (cell line)
SRR191615(GSM715725)
94genomic small RNA (size selected RNA from t. (breast)
SRR039623(GSM531986)
HCV(+) HCC Tissue Sample. (liver)
SRR191497(GSM715607)
17genomic small RNA (size selected RNA from t. (breast)
SRR033711(GSM497056)
GCB DLBCL (GCB110). (B cell)
SRR191490(GSM715600)
15genomic small RNA (size selected RNA from t. (breast)
SRR191553(GSM715663)
96genomic small RNA (size selected RNA from t. (breast)
SRR029125(GSM416754)
U2OS. (cell line)
SRR444052(SRX128900)
Sample 12cDNABarcode: AF-PP-340: ACG CTC TTC . (skin)
SRR191594(GSM715704)
70genomic small RNA (size selected RNA from t. (breast)
GSM532874(GSM532874)
G699T. (cervix)
SRR387910(GSM843862)
antibody for ip: Ago2. (ago2 cell line)
GSM532885(GSM532885)
G850N. (cervix)
.....................................................................................................................................................................................................................CTCGAAGAACTTTGTGTGAAATG.............. 2313.003.00----------------------------------------------------------------------------------------3.00-----------------------------------------------------------------------------------------------------------------------
.....................................................................................................................GTCCACAGAGAGTCTAGCACAGC.............................................................................................................. 2312.002.00----------------------------------------------------------------------------------------2.00-----------------------------------------------------------------------------------------------------------------------
..........................................................GGCCCCCGGCGCGGCGGG.............................................................................................................................................................................. 1822.002.00--------0.50-------------------------------------------------0.50-------------------------0.50-----------------------0.50---------------------------------------------------------------------------------------------------
............................................................CGCCGCGCCGGGGGCTGC............................................................................................................................................................................ 182.000.00-----2.00----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------
...................................CACTTGATAGCGTAGGTC..................................................................................................................................................................................................... 1812.002.00-------------------------------------------------------------------------------------------------------------2.00--------------------------------------------------------------------------------------------------
..........................................................CCCGCCGCGCCGGGGGCCC............................................................................................................................................................................. 192.000.00------------------------0.50-----------0.50-------------------------------------------------------------------------------------------------------0.50---------------------------------------------------------------0.50---
....................................................................GGGGGCGGGGCCCCCG...................................................................................................................................................................... 1631.001.000.670.33--------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------
..................................................................GCCGGGGGCCCCGCCCCG...................................................................................................................................................................... 181.000.00--------------------------------------------------1.00-------------------------------------------------------------------------------------------------------------------------------------------------------------
.........................................................GGCCCCCGGCGCGGCGGGA.............................................................................................................................................................................. 1911.001.00------------------------------------------------------------------------------------------1.00---------------------------------------------------------------------------------------------------------------------
........................................................GTCCCGCCGCGCCGGGGGCGCG............................................................................................................................................................................ 221.000.00--------------------------------------------1.00-------------------------------------------------------------------------------------------------------------------------------------------------------------------
..........................................................CCCGCCGCGCCGGGGGGGGA............................................................................................................................................................................ 2031.000.001.00---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------
........................................................GTCCCGCCGCGCCGGGGG................................................................................................................................................................................ 181.000.00-----------------------------------------------------------------------------------------------------------------------------------------------------------------1.00----------------------------------------------
........................................................GTCCCGCCGCGCCGGGGAC............................................................................................................................................................................... 191.000.00-----------------------------------------------------------------------------------------1.00----------------------------------------------------------------------------------------------------------------------
...............................................................CGCGCCGGGGGCCCCGCCGG....................................................................................................................................................................... 201.000.00------------1.00---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------
............................................................................CCGCCCCCGAGGCCCC.............................................................................................................................................................. 161.000.00-------------------------------------------------------------1.00--------------------------------------------------------------------------------------------------------------------------------------------------
....................................................................CGGGGGCCCCGCCCCACCG................................................................................................................................................................... 191.000.001.00---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------
.....................................................................GGGGGCCCCGCCCCCCCG................................................................................................................................................................... 1861.000.001.00---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------
.....................................................AGTGTCCCGCCGCGCCGA................................................................................................................................................................................... 181.000.00----------------------------------------------------------------------------------------------------------------------------------1.00-----------------------------------------------------------------------------
...................................................................CCGGGGGCCCCGCCCCCGGG................................................................................................................................................................... 201.000.001.00---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------
.....................................................................GGGGGCCCCGCCCCCCCCG.................................................................................................................................................................. 1961.000.001.00---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------
................................................................GCGCCGGGGGCCCCGAAG........................................................................................................................................................................ 181.000.00-------------------------------------------------------------------------1.00--------------------------------------------------------------------------------------------------------------------------------------
............................................GGCGGGACACTCACTTGATA.......................................................................................................................................................................................... 2011.001.00--------------------------------------------------------------------------------1.00-------------------------------------------------------------------------------------------------------------------------------
...............................................................CGCGCCGGGGGCCCCCCGC........................................................................................................................................................................ 191.000.00------------------------------------------------------------------------------------------------------------1.00---------------------------------------------------------------------------------------------------
..........................................................GCCCCCGGCGCGGCGGG............................................................................................................................................................................... 1730.670.67----------------0.33----------------------------------------------------0.33------------------------------------------------------------------------------------------------------------------------------------------
..........................................................CCCGCCGCGCCGGGGGCCCCCG.......................................................................................................................................................................... 220.500.000.50---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------
..........................................................GGGCCCCCGGCGCGGCGGG............................................................................................................................................................................. 1920.500.50------------------------------------------------------------------------------------------0.50---------------------------------------------------------------------------------------------------------------------
..........................................................CCCGCCGCGCCGGGGGCCCCC........................................................................................................................................................................... 210.500.00-----------------------------------------------------0.50----------------------------------------------------------------------------------------------------------------------------------------------------------
.............................................................GGGGCCCCCGGCGCGGC............................................................................................................................................................................ 1730.330.33-------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------0.33--
...........................................................CCCCCGGCGCGGCGG................................................................................................................................................................................ 1580.120.12-------------------------------------------------------------------------0.12--------------------------------------------------------------------------------------------------------------------------------------