ID: uc002jni.1_intron_12_0_chr17_73239248_r
GENE: (5)
chr17:73239198-73239577-


(1)
AGO2.ip
(2)
B-CELL
(5)
BRAIN
(20)
BREAST
(26)
CELL-LINE
(4)
CERVIX
(3)
FIBROBLAST
(5)
HEART
(1)
HELA
(9)
LIVER
(1)
OTHER
(32)
SKIN
(1)
TESTES
(3)
UTERUS
(1)
XRN.ip

Sense strand
GCCAGAAGAAGCAAAGATCAAAGACGCCTACCACATGCTGAAGAGACAGGGTACGTGTCTGCCTGCCCGCAGCCTCCAGGCAGCCCTCGAAGGCTGGCCCAGGCAAGGAGAGAAGGGAAGGTTTGGGATCCCCAGAGTCCCTCCTGAAGAGAACAGCATTTGTCCCCAGGCAAGGCTGAGTCGGAGTTGGATGGGATAAGGTGTAGCAGCCTGCCCTCCACCCTGCTACCCTTTGCAGGTCTTGATCACAGGGACGTGGCCCTTGGTGTATGAGGAGGGGTGACAAGGCAACCACAGCCTGAGTGCACGTGCTGCCATGTCCCCTTTCAGGCATAGTGCAGTCTGACCCACCAATTCCTGTGGATAGGACGCTGATCCCC
..................................................................................................................................................................................................................................................(((.....((((((((((.....((((((.(((...(((.........)))....)))..)))))).....))))))))))...)))...................................................
......................................................................................................................................................................................................................................231................................................................................................330................................................
SizePerfect hitTotal NormPerfect NormSRR189782SRR189783SRR189784SRR039623(GSM531986)
HCV(+) HCC Tissue Sample. (liver)
TAX577742(Rovira)
total RNA. (breast)
SRR342894(SRX096790)
small RNA seq of Right atrial tissue. (heart)
SRR039625(GSM531988)
HBV(-) HCV(-) HCC Tissue Sample. (liver)
SRR330887(SRX091725)
tissue: skin psoriatic uninvolveddisease stat. (skin)
SRR039622(GSM531985)
HCV(+) Adjacent Tissue Sample. (liver)
SRR330921(SRX091759)
tissue: normal skindisease state: normal. (skin)
SRR330906(SRX091744)
tissue: normal skindisease state: normal. (skin)
SRR553573(SRX182779)
source: Cerebellum. (Cerebellum)
SRR330866(SRX091704)
tissue: skin psoriatic involveddisease state:. (skin)
SRR060981(GSM569185)
Human centroblast [09-001]. (cell line)
SRR330895(SRX091733)
tissue: skin psoriatic uninvolveddisease stat. (skin)
TAX577580(Rovira)
total RNA. (breast)
SRR330912(SRX091750)
tissue: normal skindisease state: normal. (skin)
SRR060983(GSM569187)
Human pre-germinal center B cell [09-001]. (cell line)
SRR107297(GSM677704)
18-30nt fraction of small RNA. (cell line)
SRR039615(GSM531978)
Severe Chronic Hepatitis B Liver Tissue. (liver)
SRR039620(GSM531983)
HBV(+) Adjacent Tissue Sample 2. (liver)
SRR330888(SRX091726)
tissue: skin psoriatic uninvolveddisease stat. (skin)
SRR191590(GSM715700)
48genomic small RNA (size selected RNA from t. (breast)
GSM450604(GSM450604)
miRNA sequencing raw reads from post-mortem s. (brain)
SRR326279(GSM769509)
cytoplasmic fraction was isolated using PARIS. (cell line)
SRR330864(SRX091702)
tissue: skin psoriatic involveddisease state:. (skin)
SRR060984(GSM569188)
Human plasma cell [09-001]. (cell line)
SRR330923(SRX091761)
tissue: normal skindisease state: normal. (skin)
SRR330875(SRX091713)
tissue: skin psoriatic involveddisease state:. (skin)
SRR189779(GSM714639)
cell line: HEK293clip variant: PAR-CLIPenzyma. (cell line)
SRR189780(GSM714640)
cell line: HEK293clip variant: PAR-CLIPenzyma. (cell line)
SRR040014(GSM532899)
G623N. (cervix)
SRR330862(SRX091700)
tissue: skin psoriatic involveddisease state:. (skin)
SRR330870(SRX091708)
tissue: skin psoriatic involveddisease state:. (skin)
SRR189786SRR330915(SRX091753)
tissue: normal skindisease state: normal. (skin)
SRR342895(SRX096791)
small RNA seq of Left atrial tissue. (heart)
SRR060986(GSM569190)
Human memory B cell [09-001]. (cell line)
SRR029125(GSM416754)
U2OS. (cell line)
SRR330904(SRX091742)
tissue: normal skindisease state: normal. (skin)
SRR342897(SRX096793)
small RNA seq of Left atrial tissue. (heart)
SRR326280(GSM769510)
total cell content of unperturbed cells was s. (cell line)
SRR094129(GSM651905)
small RNA(18-35nt)small RNA deep sequencing o. (uterus)
SRR342899(SRX096795)
small RNA seq of Left atrial tissue. (heart)
SRR330889(SRX091727)
tissue: skin psoriatic uninvolveddisease stat. (skin)
SRR191605(GSM715715)
76genomic small RNA (size selected RNA from t. (breast)
SRR037942(GSM510480)
293DroshaTN_cand5. (cell line)
GSM450606(GSM450606)
miRNA sequencing raw reads from post-mortem s. (brain)
SRR330873(SRX091711)
tissue: skin psoriatic involveddisease state:. (skin)
SRR330883(SRX091721)
tissue: skin psoriatic uninvolveddisease stat. (skin)
SRR207110(GSM721072)
Nuclear RNA. (cell line)
SRR330908(SRX091746)
tissue: normal skindisease state: normal. (skin)
SRR037935(GSM510473)
293cand3. (cell line)
SRR330913(SRX091751)
tissue: normal skindisease state: normal. (skin)
SRR191603(GSM715713)
71genomic small RNA (size selected RNA from t. (breast)
SRR094130(GSM651906)
small RNA(18-35nt)small RNA deep sequencing o. (uterus)
SRR330907(SRX091745)
tissue: normal skindisease state: normal. (skin)
GSM450601(GSM450601)
miRNA sequencing raw reads from post-mortem s. (brain)
SRR040028(GSM532913)
G026N. (cervix)
SRR040011(GSM532896)
G529T. (cervix)
SRR191566(GSM715676)
94genomic small RNA (size selected RNA from t. (breast)
SRR040016(GSM532901)
G645N. (cervix)
SRR060985(GSM569189)
Human naive B cell [09-001]. (cell line)
SRR330910(SRX091748)
tissue: normal skindisease state: normal. (skin)
SRR191581(GSM715691)
104genomic small RNA (size selected RNA from . (breast)
SRR191434(GSM715544)
171genomic small RNA (size selected RNA from . (breast)
SRR330885(SRX091723)
tissue: skin psoriatic uninvolveddisease stat. (skin)
SRR191565(GSM715675)
92genomic small RNA (size selected RNA from t. (breast)
SRR037876(GSM522374)
fibroblasts_cell_culture. (fibroblast)
SRR037937(GSM510475)
293cand2. (cell line)
SRR444062(SRX128910)
Sample 27_3cDNABarcode: AF-PP-343: ACG CTC TT. (skin)
SRR039192(GSM494811)
K562 cell line is derived from a CML patient . (cell line)
SRR033721(GSM497066)
Ly3 cell line (Ly3). (B cell)
SRR363675(GSM830252)
cell type: human foreskin fibroblasts (HFF)tr. (fibroblast)
SRR387910(GSM843862)
antibody for ip: Ago2. (ago2 cell line)
SRR039612(GSM531975)
Human Normal Liver Tissue Sample 2. (liver)
SRR191541(GSM715651)
63genomic small RNA (size selected RNA from t. (breast)
TAX577739(Rovira)
total RNA. (breast)
TAX577741(Rovira)
total RNA. (breast)
SRR330917(SRX091755)
tissue: normal skindisease state: normal. (skin)
SRR191551(GSM715661)
32genomic small RNA (size selected RNA from t. (breast)
SRR330899(SRX091737)
tissue: skin psoriatic uninvolveddisease stat. (skin)
SRR033715(GSM497060)
Mantle Cell Lymphoma (Mino122). (B cell)
SRR363676(GSM830253)
cell type: human foreskin fibroblasts (HFF)tr. (fibroblast)
SRR191627(GSM715737)
45genomic small RNA (size selected RNA from t. (breast)
SRR029126(GSM416755)
143B. (cell line)
SRR330874(SRX091712)
tissue: skin psoriatic involveddisease state:. (skin)
SRR191595(GSM715705)
72genomic small RNA (size selected RNA from t. (breast)
SRR207115(GSM721077)
XRN1&2 knockdown. (XRN1/XRN2 cell line)
SRR037940(GSM510478)
293cand5_rep2. (cell line)
SRR330868(SRX091706)
tissue: skin psoriatic involveddisease state:. (skin)
SRR342900(SRX096796)
small RNA seq of Right atrial tissue. (heart)
SRR553576(SRX182782)
source: Testis. (testes)
SRR330877(SRX091715)
tissue: skin psoriatic involveddisease state:. (skin)
SRR029132(GSM416761)
MB-MDA231. (cell line)
GSM450602(GSM450602)
miRNA sequencing raw reads from post-mortem s. (brain)
TAX577744(Rovira)
total RNA. (breast)
SRR330869(SRX091707)
tissue: skin psoriatic involveddisease state:. (skin)
TAX577738(Rovira)
total RNA. (breast)
TAX577453(Rovira)
total RNA. (breast)
SRR038856(GSM458539)
D11. (cell line)
SRR039619(GSM531982)
HBV(+) HCC Tissue Sample 1. (liver)
SRR330878(SRX091716)
tissue: skin psoriatic involveddisease state:. (skin)
SRR037944(GSM510482)
293DcrTN_cand5. (cell line)
SRR330876(SRX091714)
tissue: skin psoriatic involveddisease state:. (skin)
SRR330886(SRX091724)
tissue: skin psoriatic uninvolveddisease stat. (skin)
TAX577745(Rovira)
total RNA. (breast)
SRR387909(GSM843861)
specific-host: Homo sapienshost cell line: Su. (cell line)
GSM450598(GSM450598)
miRNA sequencing raw reads from post-mortem s. (brain)
SRR326281(GSM769511)
"Dicer mRNA was knocked down using siDicer, c. (cell line)
SRR039624(GSM531987)
HBV(-) HCV(-) Adjacent Tissue Sample. (liver)
TAX577743(Rovira)
total RNA. (breast)
SRR039611(GSM531974)
Human Normal Liver Tissue Sample 1. (liver)
DRR001488(DRX001042)
"Hela short nuclear cell fraction, LNA(+)". (hela)
SRR029054(GSM402329)
MCF7_smallRNAseq. (cell line)
SRR094132(GSM651908)
small RNA(18-35nt)small RNA deep sequencing o. (uterus)
.....................................................................................................................................................................................................................................................................................................................TGCTGCCATGTCCCCTTTCAGT.................................................22153.0049.0010.001.00---2.00---2.001.001.002.00-1.00------1.001.00--1.00-1.00---1.00-1.00----1.001.001.001.00------1.001.00-1.001.00---1.00------1.00--1.00----1.00-1.00-----1.00-1.00-1.00-1.001.001.00--1.001.00--1.00-1.001.00----1.00-1.001.00----------
.....................................................................................................................................................................................................................................................................................................................TGCTGCCATGTCCCCTTTCAG..................................................21149.0049.0032.0011.002.00--------1.00---------1.00--1.001.00------------------------------------------------------------------------------------------
...............................................................TGCCCGCAGCCTCCACCA...........................................................................................................................................................................................................................................................................................................1810.000.00-------------3.00---1.00--------1.00----------1.00--------------------------------1.00-----------------------------1.00-----1.00-----1.00---
.....................................................................................................................................................................................................................................................................................................................TGCTGCCATGTCCCCTTTCAGA.................................................2219.0049.001.00---------2.00-1.00---------1.00-------------1.00------------------------------1.00------1.00-----------------------1.00-----------------
......................................................................................................................................................................................................................................................................................................................GCTGCCATGTCCCCTTTCAG..................................................2017.007.005.00-2.00-----------------------------------------------------------------------------------------------------------------
.....................................................................................................................................................................................................................................................................................................................TGCTGCCATGTCCCCTTTCAGTA................................................2317.0049.00-----2.00----------------------1.00---1.00---1.00---------------------------1.001.00--------------------------------------------------
......................................................................................................................................................................................................................................................................................................................GCTGCCATGTCCCCTTTCAGT.................................................2116.007.001.00------3.00--------------------1.00-------------------------------1.00-------------------------------------------------------
.....................................................................................................................................................................................................................................................................................................................TGCTGCCATGTCCCCTTTCA...................................................2014.004.00-----------------1.00-----------------------------1.00-------------1.00----------------------1.00-------------------------------
.....................................................................................................................................................................................................................................................................................................................TGCTGCCATGTCCCCTTTCAGTT................................................2313.0049.00---------1.00-----------------------1.00-------------------1.00--------------------------------------------------------------
.....................................................................................................................................................................................................................................................................................................................TGCTGCCATGTCCCCTTTCCGT.................................................2213.001.001.00----------------------------------------------------------1.00----------------1.00---------------------------------------
......................................................................................................................................................................................................................................................................................................................GCTGCCATGTCCCCTTTCAGA.................................................2113.007.003.00-------------------------------------------------------------------------------------------------------------------
.....................................................................................................................................................................................................................................................................................................................TGCTGCCATGTCCCCTTTCAGC.................................................2212.0049.00--------------------------1.00------------------------------------------------------------------1.00----------------------
................................................................................................................................................................................................................................................................................AGGAGGGGTGACAAGGCAACCA......................................................................................2212.002.00----------------1.00----------1.00----------------------------------------------------------------------------------------
..............................................................CTGCCCGCAGCCTCCACCA...........................................................................................................................................................................................................................................................................................................192.000.00-------1.00---------------------------------------------------------------------------------1.00--------------------------
.....................................................................................................................................................................................................................................................................................................................TGCTGCCATGTCCCCTTTCATT.................................................2212.004.00--------------------------------------1.00-----------------------------------------1.00-----------------------------------
.....................................................................................................................................................................................................................................................................................................................TGCTGCCATGTCCCCTTCAG...................................................202.000.001.00-1.00-----------------------------------------------------------------------------------------------------------------
......................................................................................................................................................................................................................................................................................................................GCTGCCATGTCCCCTTTCATT.................................................212.000.002.00-------------------------------------------------------------------------------------------------------------------
....................................GCTGAAGAGACAGGGTCG......................................................................................................................................................................................................................................................................................................................................182.000.00--------------------------------------------------1.00-------------------------------1.00---------------------------------
.....................................................................................................................................................................................................................................................................................................................TGCTGCCATGTCCCCTTTCAAT.................................................2212.004.00-------------------2.00------------------------------------------------------------------------------------------------
................................................................................................................................................................................................................................................................................AGGAGGGGTGACAAGGCAACCACAGCCCG...............................................................................292.000.00-----------------------------2.00--------------------------------------------------------------------------------------
.....................................................................................................................................................................................................................................................................................................................TGCTGCCATGTCCCCTTTCAATT................................................2311.004.00---------------------------------------------1.00----------------------------------------------------------------------
...................................................................................................................................................................................GTCGGAGTTGGATGG..........................................................................................................................................................................................1511.001.00--------------------------------1.00-----------------------------------------------------------------------------------
........................................................................................................................................................................GGCAAGGCTGAGTCGGAGTTGGATGG..........................................................................................................................................................................................2611.001.00--------------------------------------------1.00-----------------------------------------------------------------------
.................................................................................................................................................................................................................................................................................GGAGGGGTGACAAGGCGGAG.......................................................................................201.000.00---------------------------------------------------------------------------1.00----------------------------------------
................................................................................................................................................................................................................................................................................AGGAGGGGTGACAAGGCAACAA......................................................................................2211.001.00-------------------------------------1.00------------------------------------------------------------------------------
...............................................................TGCCCGCAGCCTCCAACA...........................................................................................................................................................................................................................................................................................................181.000.00----------------------------------------------1.00---------------------------------------------------------------------
.....................................................................................................................................................................................................................................................................................................................TGCTGCCATGTCCCCTTT.....................................................1811.001.00-----------------------------------------------------------------------------1.00--------------------------------------
........................................................................................................................................................................................................................................................................................................................TGCCATGTCCCCTTTCCGT.................................................191.000.00------------------------------------------------------------------------------1.00-------------------------------------
...............................................................................................................................................................................................................................................................................GAGGAGGGGTGACAAGGCAA.........................................................................................2011.001.00------------------1.00-------------------------------------------------------------------------------------------------
.....................................................................................................................................................................................................................................................................................................................TGCTGCCATGTCCCCTTCAGT..................................................211.000.00----------------------------------1.00---------------------------------------------------------------------------------
...................AAAGACGCCTACCACATGCTGAAGA................................................................................................................................................................................................................................................................................................................................................2511.001.00-------------------------------------------------------------------------------------------------------1.00------------
....................................GCTGAAGAGACAGGGACGA.....................................................................................................................................................................................................................................................................................................................................191.000.00------------------------------------------------------------------------1.00-------------------------------------------
......................................................................................................................................................................................................................................................................................................................................................CTGACCCACCAATTCCTAGCA.................211.000.00----------------------------------1.00---------------------------------------------------------------------------------
.....................................................................................................................................................................................................................................................................................................................TGCTGCCATGTCCCCTTTC....................................................1911.001.00-----------------------------------------------------------------------------------------------------1.00--------------
................................ACATGCTGAAGAGACAGGGCATA.....................................................................................................................................................................................................................................................................................................................................231.000.00---1.00----------------------------------------------------------------------------------------------------------------
................................................................................................................................................................................................................................................................................AGGAGGGGTGACAAGGCAACC.......................................................................................2111.001.00----------------------------------------------------------1.00---------------------------------------------------------
.................................................................................................................................................................................................................................................................................................................................................................ATTCCTGTGGATAGGACGC........1911.001.00---------------------------------------------------------1.00----------------------------------------------------------
......................................................................................................................................................................................................................................................................................................................GCTGCCATGTCCCCTTTCAGAAAA..............................................2411.007.00------------------------------------------------------1.00-------------------------------------------------------------
.......................................................................................................................................................................................................................................................................................................................................................TGACCCACCAATTCCTGTGGATAGGACGCC.......301.000.00------------------------------1.00-------------------------------------------------------------------------------------
..............................................................................................................................................................................................................................................................................TGAGGAGGGGTGACAAGGCAA.........................................................................................2111.001.00------------------1.00-------------------------------------------------------------------------------------------------
.....................................................................................................................................................................................................................................................................................................................................................................CTGTGGATAGGACGCTG......1711.001.00-----------------------1.00--------------------------------------------------------------------------------------------
.....................................................................................................................................................................................................................................................................................................................TGCTGCCATGTCCCCTTTCACT.................................................2211.004.00--------------------------------------------------------------1.00-----------------------------------------------------
...............................................................TGCCCGCAGCCTCCACCAT..........................................................................................................................................................................................................................................................................................................191.000.00-----------------------------------1.00--------------------------------------------------------------------------------
..............................................................................................................................................................................................................................................................................TGAGGAGGGGTGACAAGGCAACT.......................................................................................231.000.00-------------------------------------------------------------------------------------------------------------1.00------
...............................................................................................................................................................................................................................................................................................................................................................CAATTCCTGTGGATAGGACGCTGATCC..2711.001.00----------------1.00---------------------------------------------------------------------------------------------------
.....................................................................................................................................................................................................................................................................................................................TGCTGCCATGTCCCCTTTCAA..................................................2111.004.00-1.00------------------------------------------------------------------------------------------------------------------
...............................CACATGCTGAAGAGACAGG..........................................................................................................................................................................................................................................................................................................................................1911.001.00--------------1.00-----------------------------------------------------------------------------------------------------
.................................................................................................................................................................................................................................................................................................................................................................ATTCCTGTGGATAGGACGCTGATC...2411.001.00----------------------------------------------------------------------------------------1.00---------------------------
.....................................................................................................................................................................................................................................................................................................................TGCTGCCATGTCCCCTCAGT...................................................201.000.00--1.00-----------------------------------------------------------------------------------------------------------------
...........CAAAGATCAAAGACGCCTACC............................................................................................................................................................................................................................................................................................................................................................2111.001.00-------------------------------------------1.00------------------------------------------------------------------------
..............................................................................................................................................................................................ATGGGATAAGGTGTAGCGTAC.........................................................................................................................................................................211.000.00-----------------------------------------------------------------------------------------------1.00--------------------
................................................................................................................................................................................................................................................................................AGGAGGGGTGACAAGGCAACCAC.....................................................................................2311.001.00------------------------------------------------------------------------------------------------------------1.00-------
............................TACCACATGCTGAAGAGACAGGGCATA.....................................................................................................................................................................................................................................................................................................................................271.000.00--------------------------------------------------------------------------------------------1.00-----------------------
.....................................................................................................................................................................................................................................................................................................................TGCTGCCATGTCCCCTTTCC...................................................2011.001.00-------------------------------1.00------------------------------------------------------------------------------------
........................................................................................................AAGGAGAGAAGGGAAGCGAA................................................................................................................................................................................................................................................................201.000.00--------1.00-----------------------------------------------------------------------------------------------------------
................................................................................................................................................................................................................................................................................AGGAGGGGTGACAAGGCAAC........................................................................................2011.001.00-----------------------------------1.00--------------------------------------------------------------------------------
......................................................................................................................................................................................................................................................................................................................GCTGCCATGTCCCCTTTCTGT.................................................211.000.001.00-------------------------------------------------------------------------------------------------------------------
..................................................................................................................................................................................................................................................TGATCACAGGGACGTG..........................................................................................................................1620.500.50-----0.50--------------------------------------------------------------------------------------------------------------
.....................................................................................CTCGAAGGCTGGCCCAGGC....................................................................................................................................................................................................................................................................................1920.500.50-----------------------------------------------------------------------------------------------------------------0.50--
...................................................................................................................................................................................................................................................................................................CCACAGCCTGAGTGCAC........................................................................1730.330.33--------------0.33-----------------------------------------------------------------------------------------------------
...................................................................................................CAGGCAAGGAGAGAAGG........................................................................................................................................................................................................................................................................1730.330.33---------------------------------------0.33----------------------------------------------------------------------------
..................................ATGCTGAAGAGACAGG..........................................................................................................................................................................................................................................................................................................................................1650.200.20-----------------------------------------0.20--------------------------------------------------------------------------

Antisense strand
GCCAGAAGAAGCAAAGATCAAAGACGCCTACCACATGCTGAAGAGACAGGGTACGTGTCTGCCTGCCCGCAGCCTCCAGGCAGCCCTCGAAGGCTGGCCCAGGCAAGGAGAGAAGGGAAGGTTTGGGATCCCCAGAGTCCCTCCTGAAGAGAACAGCATTTGTCCCCAGGCAAGGCTGAGTCGGAGTTGGATGGGATAAGGTGTAGCAGCCTGCCCTCCACCCTGCTACCCTTTGCAGGTCTTGATCACAGGGACGTGGCCCTTGGTGTATGAGGAGGGGTGACAAGGCAACCACAGCCTGAGTGCACGTGCTGCCATGTCCCCTTTCAGGCATAGTGCAGTCTGACCCACCAATTCCTGTGGATAGGACGCTGATCCCC
..................................................................................................................................................................................................................................................(((.....((((((((((.....((((((.(((...(((.........)))....)))..)))))).....))))))))))...)))...................................................
......................................................................................................................................................................................................................................231................................................................................................330................................................
SizePerfect hitTotal NormPerfect NormSRR189782SRR189783SRR189784SRR039623(GSM531986)
HCV(+) HCC Tissue Sample. (liver)
TAX577742(Rovira)
total RNA. (breast)
SRR342894(SRX096790)
small RNA seq of Right atrial tissue. (heart)
SRR039625(GSM531988)
HBV(-) HCV(-) HCC Tissue Sample. (liver)
SRR330887(SRX091725)
tissue: skin psoriatic uninvolveddisease stat. (skin)
SRR039622(GSM531985)
HCV(+) Adjacent Tissue Sample. (liver)
SRR330921(SRX091759)
tissue: normal skindisease state: normal. (skin)
SRR330906(SRX091744)
tissue: normal skindisease state: normal. (skin)
SRR553573(SRX182779)
source: Cerebellum. (Cerebellum)
SRR330866(SRX091704)
tissue: skin psoriatic involveddisease state:. (skin)
SRR060981(GSM569185)
Human centroblast [09-001]. (cell line)
SRR330895(SRX091733)
tissue: skin psoriatic uninvolveddisease stat. (skin)
TAX577580(Rovira)
total RNA. (breast)
SRR330912(SRX091750)
tissue: normal skindisease state: normal. (skin)
SRR060983(GSM569187)
Human pre-germinal center B cell [09-001]. (cell line)
SRR107297(GSM677704)
18-30nt fraction of small RNA. (cell line)
SRR039615(GSM531978)
Severe Chronic Hepatitis B Liver Tissue. (liver)
SRR039620(GSM531983)
HBV(+) Adjacent Tissue Sample 2. (liver)
SRR330888(SRX091726)
tissue: skin psoriatic uninvolveddisease stat. (skin)
SRR191590(GSM715700)
48genomic small RNA (size selected RNA from t. (breast)
GSM450604(GSM450604)
miRNA sequencing raw reads from post-mortem s. (brain)
SRR326279(GSM769509)
cytoplasmic fraction was isolated using PARIS. (cell line)
SRR330864(SRX091702)
tissue: skin psoriatic involveddisease state:. (skin)
SRR060984(GSM569188)
Human plasma cell [09-001]. (cell line)
SRR330923(SRX091761)
tissue: normal skindisease state: normal. (skin)
SRR330875(SRX091713)
tissue: skin psoriatic involveddisease state:. (skin)
SRR189779(GSM714639)
cell line: HEK293clip variant: PAR-CLIPenzyma. (cell line)
SRR189780(GSM714640)
cell line: HEK293clip variant: PAR-CLIPenzyma. (cell line)
SRR040014(GSM532899)
G623N. (cervix)
SRR330862(SRX091700)
tissue: skin psoriatic involveddisease state:. (skin)
SRR330870(SRX091708)
tissue: skin psoriatic involveddisease state:. (skin)
SRR189786SRR330915(SRX091753)
tissue: normal skindisease state: normal. (skin)
SRR342895(SRX096791)
small RNA seq of Left atrial tissue. (heart)
SRR060986(GSM569190)
Human memory B cell [09-001]. (cell line)
SRR029125(GSM416754)
U2OS. (cell line)
SRR330904(SRX091742)
tissue: normal skindisease state: normal. (skin)
SRR342897(SRX096793)
small RNA seq of Left atrial tissue. (heart)
SRR326280(GSM769510)
total cell content of unperturbed cells was s. (cell line)
SRR094129(GSM651905)
small RNA(18-35nt)small RNA deep sequencing o. (uterus)
SRR342899(SRX096795)
small RNA seq of Left atrial tissue. (heart)
SRR330889(SRX091727)
tissue: skin psoriatic uninvolveddisease stat. (skin)
SRR191605(GSM715715)
76genomic small RNA (size selected RNA from t. (breast)
SRR037942(GSM510480)
293DroshaTN_cand5. (cell line)
GSM450606(GSM450606)
miRNA sequencing raw reads from post-mortem s. (brain)
SRR330873(SRX091711)
tissue: skin psoriatic involveddisease state:. (skin)
SRR330883(SRX091721)
tissue: skin psoriatic uninvolveddisease stat. (skin)
SRR207110(GSM721072)
Nuclear RNA. (cell line)
SRR330908(SRX091746)
tissue: normal skindisease state: normal. (skin)
SRR037935(GSM510473)
293cand3. (cell line)
SRR330913(SRX091751)
tissue: normal skindisease state: normal. (skin)
SRR191603(GSM715713)
71genomic small RNA (size selected RNA from t. (breast)
SRR094130(GSM651906)
small RNA(18-35nt)small RNA deep sequencing o. (uterus)
SRR330907(SRX091745)
tissue: normal skindisease state: normal. (skin)
GSM450601(GSM450601)
miRNA sequencing raw reads from post-mortem s. (brain)
SRR040028(GSM532913)
G026N. (cervix)
SRR040011(GSM532896)
G529T. (cervix)
SRR191566(GSM715676)
94genomic small RNA (size selected RNA from t. (breast)
SRR040016(GSM532901)
G645N. (cervix)
SRR060985(GSM569189)
Human naive B cell [09-001]. (cell line)
SRR330910(SRX091748)
tissue: normal skindisease state: normal. (skin)
SRR191581(GSM715691)
104genomic small RNA (size selected RNA from . (breast)
SRR191434(GSM715544)
171genomic small RNA (size selected RNA from . (breast)
SRR330885(SRX091723)
tissue: skin psoriatic uninvolveddisease stat. (skin)
SRR191565(GSM715675)
92genomic small RNA (size selected RNA from t. (breast)
SRR037876(GSM522374)
fibroblasts_cell_culture. (fibroblast)
SRR037937(GSM510475)
293cand2. (cell line)
SRR444062(SRX128910)
Sample 27_3cDNABarcode: AF-PP-343: ACG CTC TT. (skin)
SRR039192(GSM494811)
K562 cell line is derived from a CML patient . (cell line)
SRR033721(GSM497066)
Ly3 cell line (Ly3). (B cell)
SRR363675(GSM830252)
cell type: human foreskin fibroblasts (HFF)tr. (fibroblast)
SRR387910(GSM843862)
antibody for ip: Ago2. (ago2 cell line)
SRR039612(GSM531975)
Human Normal Liver Tissue Sample 2. (liver)
SRR191541(GSM715651)
63genomic small RNA (size selected RNA from t. (breast)
TAX577739(Rovira)
total RNA. (breast)
TAX577741(Rovira)
total RNA. (breast)
SRR330917(SRX091755)
tissue: normal skindisease state: normal. (skin)
SRR191551(GSM715661)
32genomic small RNA (size selected RNA from t. (breast)
SRR330899(SRX091737)
tissue: skin psoriatic uninvolveddisease stat. (skin)
SRR033715(GSM497060)
Mantle Cell Lymphoma (Mino122). (B cell)
SRR363676(GSM830253)
cell type: human foreskin fibroblasts (HFF)tr. (fibroblast)
SRR191627(GSM715737)
45genomic small RNA (size selected RNA from t. (breast)
SRR029126(GSM416755)
143B. (cell line)
SRR330874(SRX091712)
tissue: skin psoriatic involveddisease state:. (skin)
SRR191595(GSM715705)
72genomic small RNA (size selected RNA from t. (breast)
SRR207115(GSM721077)
XRN1&2 knockdown. (XRN1/XRN2 cell line)
SRR037940(GSM510478)
293cand5_rep2. (cell line)
SRR330868(SRX091706)
tissue: skin psoriatic involveddisease state:. (skin)
SRR342900(SRX096796)
small RNA seq of Right atrial tissue. (heart)
SRR553576(SRX182782)
source: Testis. (testes)
SRR330877(SRX091715)
tissue: skin psoriatic involveddisease state:. (skin)
SRR029132(GSM416761)
MB-MDA231. (cell line)
GSM450602(GSM450602)
miRNA sequencing raw reads from post-mortem s. (brain)
TAX577744(Rovira)
total RNA. (breast)
SRR330869(SRX091707)
tissue: skin psoriatic involveddisease state:. (skin)
TAX577738(Rovira)
total RNA. (breast)
TAX577453(Rovira)
total RNA. (breast)
SRR038856(GSM458539)
D11. (cell line)
SRR039619(GSM531982)
HBV(+) HCC Tissue Sample 1. (liver)
SRR330878(SRX091716)
tissue: skin psoriatic involveddisease state:. (skin)
SRR037944(GSM510482)
293DcrTN_cand5. (cell line)
SRR330876(SRX091714)
tissue: skin psoriatic involveddisease state:. (skin)
SRR330886(SRX091724)
tissue: skin psoriatic uninvolveddisease stat. (skin)
TAX577745(Rovira)
total RNA. (breast)
SRR387909(GSM843861)
specific-host: Homo sapienshost cell line: Su. (cell line)
GSM450598(GSM450598)
miRNA sequencing raw reads from post-mortem s. (brain)
SRR326281(GSM769511)
"Dicer mRNA was knocked down using siDicer, c. (cell line)
SRR039624(GSM531987)
HBV(-) HCV(-) Adjacent Tissue Sample. (liver)
TAX577743(Rovira)
total RNA. (breast)
SRR039611(GSM531974)
Human Normal Liver Tissue Sample 1. (liver)
DRR001488(DRX001042)
"Hela short nuclear cell fraction, LNA(+)". (hela)
SRR029054(GSM402329)
MCF7_smallRNAseq. (cell line)
SRR094132(GSM651908)
small RNA(18-35nt)small RNA deep sequencing o. (uterus)
.....................................................................................................................................................................................................................................................................................................................................................TCTGACCCACCAATTCGGTA................... 206.000.00---2.001.00-1.00-------------1.00---------------------1.00-------------------------------------------------------------------------
.....................................................................................................................................................................................................................................................................................................................................................TCTGACCCACCAATTCG...................... 174.000.00----1.00----------1.00---------------------------------------1.00-------------------------------------------1.00----------------
.....................................................................................................................................................................................................................................................................................................................................................TCTGACCCACCAATTCGGTT................... 204.000.00---1.001.00-2.00-------------------------------------------------------------------------------------------------------------
.....................................................................................................................................................................................................................................................................................................................................................TCTGACCCACCAATTCGGT.................... 193.000.00------1.00-2.00-----------------------------------------------------------------------------------------------------------
.....................................................................................................................................................................................................................................................................................................................................................TCTGACCCACCAATTCTGTT................... 202.000.00----1.00----------1.00----------------------------------------------------------------------------------------------------
.....................................................................................................................................................................................................................................................................................................................................................TCTGACCCACCAATTCGG..................... 182.000.00------------------------1.00--------------------------------------------------------------------------------------1.00----
.....................................................................................................................................................................................................................................................................................................................................................TCTGACCCACCAATTCGATT................... 201.000.00---1.00----------------------------------------------------------------------------------------------------------------
.................................................................................................................................CCCCAGAGTCCCTCCTGCCT....................................................................................................................................................................................................................................... 201.000.00-----------------------------------------------------------------------------------------------------------1.00--------
......................................................................................................................................................................................GGAGTTGGATGGGATAATCG.................................................................................................................................................................................. 201.000.00---------------------------------------------------------------------1.00----------------------------------------------
........................................................................................................................................................................................................................TCCACCCTGCTACCCTTTCGT............................................................................................................................................... 211.000.00--------------------------------------------------------------------1.00-----------------------------------------------
..................................................................................................................................................................................................................CTGCCCTCCACCCTGTGTA....................................................................................................................................................... 191.000.00-----------------------1.00--------------------------------------------------------------------------------------------
.....................................................................................................................................................................................................................................................................................................................................................TCTGACCCACCAATTCGGAA................... 201.000.00--------------------------------------------------------------------------------------------------------------1.00-----
.....................................................................................................................................................................................................................................................................................................................................................TCTGACCCACCAATTCTGGA................... 201.000.00--------------------1.00-----------------------------------------------------------------------------------------------
....................TGTGGTAGGCGTCTT......................................................................................................................................................................................................................................................................................................................................................... 1511.001.00-----------1.00--------------------------------------------------------------------------------------------------------
............................................................................................................................................................................AGGCTGAGTCGGAGTTCCTG............................................................................................................................................................................................ 201.000.00------------------------------1.00-------------------------------------------------------------------------------------
......................................................................................................................................................................................................................................................................................................................................................CTGACCCACCAATTCGGGT................... 190.440.00----0.11-0.11--------0.11--------------------------------------------------------------------------------------------------0.11-
......................................................................................................................................................................................................................................................................................................................................................CTGACCCACCAATTCTGGT................... 190.440.00----0.22---0.11------0.11----------------------------------------------------------------------------------------------------
.........................................ACGTACCCTGTCTCT.................................................................................................................................................................................................................................................................................................................................... 1560.330.33----------------------------------------0.33---------------------------------------------------------------------------
......................................................................................................................................................................................................................................................................................................................................................GAATTGGTGGGTCAG....................... 1590.110.11-----------------------------------------0.11--------------------------------------------------------------------------
......................................................................................................................................................................................................................................................................................................................................................CTGACCCACCAATTCTTGG................... 190.110.00------------------------------------------0.11-------------------------------------------------------------------------
......................................................................................................................................................................................................................................................................................................................................................CTGACCCACCAATTCTTCT................... 190.110.00---0.11----------------------------------------------------------------------------------------------------------------
......................................................................................................................................................................................................................................................................................................................................................CTGACCCACCAATTCTGTT................... 190.110.00----0.11---------------------------------------------------------------------------------------------------------------
......................................................................................................................................................................................................................................................................................................................................................CTGACCCACCAATTCTTGT................... 190.110.00----0.11---------------------------------------------------------------------------------------------------------------
......................................................................................................................................................................................................................................................................................................................................................CTGACCCACCAATTCGGGG................... 190.110.00---0.11----------------------------------------------------------------------------------------------------------------
......................................................................................................................................................................................................................................................................................................................................................CTGACCCACCAATTCGT..................... 170.110.00-------------------------------------------------------------------------------------------------------------------0.11