ID: uc002jni.10
GENE: GGA3(7)
chr17:73238505-73238961-


(3)
AGO1.ip 		(1)
AGO1.ip OTHER.mut 		(3)
AGO2.ip 		(1)
AGO3.ip 		(10)
B-CELL 		(8)
BRAIN 		(17)
BREAST 		(34)
CELL-LINE 		(5)
CERVIX 		(7)
HEART 		(4)
HELA 		(1)
KIDNEY 		(8)
LIVER 		(3)
OTHER 		(33)
SKIN 		(2)
UTERUS 		(1)
XRN.ip

Sense strand
CAGATGACCTGCAGGAGGCCAACAAGCTCATCAAGTCCATGGTGAAGGAAGTGAGTGGGCCCCGGTCCTTCAGGCACGGGGTGGAGGAGCCCATGGCCACACAGCAGAAGCCGCTTTGCCCCGGACACGGGCCTGTTTTGTTCTCCCCTGCTGCCAGCTGCCCTACCTGTGCCCCGGTGGCTGAGAGTGGGAGGAGGAGCACAATAGCTTCCGCGGGAGCACGGAAGAGAGGAGTGGGTTGGGAGCAGTGTTGTGAAAGCAGAAGTATAGACTGGGCCCCAGGCACCCCACACTGAAAGGAGCTTCCGAGCGTCTGTACTTGTGTTGTGGGGTAAGGTGTGACCTGGTGGAAGTGGAAAGACAGTCAAGTGACGCTCTCTTTCTCTTGAACTTCTTCACTGGGGCAGGACGAGGCACGGATCCAGAAGGTGACCAAGCGTCTGCACACGTTAGAGGA
...................................................................................................................................................................................................................................................................................................................................................((.((..(((((((((((((((..(((....)))....))))))).....)))))..)))..)).))...................................................
............................................................................................................................................................................................................................................................................................................................................333.......................................................................407................................................
SizePerfect hitTotal NormPerfect NormSRR387910(GSM843862)
antibody for ip: Ago2. (ago2 cell line)		SRR037942(GSM510480)
293DroshaTN_cand5. (cell line)		SRR039625(GSM531988)
HBV(-) HCV(-) HCC Tissue Sample. (liver)		SRR189782SRR326280(GSM769510)
total cell content of unperturbed cells was s. (cell line)		SRR207110(GSM721072)
Nuclear RNA. (cell line)		DRR000555(DRX000313)
"THP-1 whole cell RNA, no treatment". (cell line)		SRR326279(GSM769509)
cytoplasmic fraction was isolated using PARIS. (cell line)		SRR553573(SRX182779)
source: Cerebellum. (Cerebellum)		SRR037941(GSM510479)
293DroshaTN. (cell line)		RoviraIPAgo2(Rovira)
total RNA. (ago2 breast)		SRR330879(SRX091717)
tissue: skin psoriatic involveddisease state:. (skin)		SRR553572(SRX182778)
source: Frontal Cortex. (Frontal Cortex)		DRR000556(DRX000314)
"THP-1 whole cell RNA, after 3 day treatment . (cell line)		SRR330903(SRX091741)
tissue: skin psoriatic uninvolveddisease stat. (skin)		SRR330885(SRX091723)
tissue: skin psoriatic uninvolveddisease stat. (skin)		SRR207114(GSM721076)
"IP against AGO 1 & 2, RRP40 knockdown". (ago1/2 RRP40 cell line)		SRR207115(GSM721077)
XRN1&2 knockdown. (XRN1/XRN2 cell line)		SRR189786SRR037939(GSM510477)
293cand5_rep1. (cell line)		SRR189779(GSM714639)
cell line: HEK293clip variant: PAR-CLIPenzyma. (cell line)		SRR033712(GSM497057)
Burkitt Lymphoma (BL510). (B cell)		SRR033719(GSM497064)
6hr Activated B cell line (ABC158). (B cell)		SRR037936(GSM510474)
293cand1. (cell line)		SRR015363(GSM380328)
Germinal Center B cell (GC40). (B cell)		SRR553575(SRX182781)
source: Kidney. (Kidney)		SRR040028(GSM532913)
G026N. (cervix)		SRR207113(GSM721075)
IP against AGO 1 & 2. (ago1/2 cell line)		DRR000557(DRX000315)
"THP-1 whole cell RNA, after 3 day treatment . (cell line)		SRR037937(GSM510475)
293cand2. (cell line)		SRR095854(SRX039177)
"miRNA were isolated from FirstChoice Human B. (brain)		SRR330896(SRX091734)
tissue: skin psoriatic uninvolveddisease stat. (skin)		SRR033720(GSM497065)
EBV activated B cell line (EBV159). (B cell)		SRR330902(SRX091740)
tissue: skin psoriatic uninvolveddisease stat. (skin)		SRR330915(SRX091753)
tissue: normal skindisease state: normal. (skin)		SRR037944(GSM510482)
293DcrTN_cand5. (cell line)		SRR029124(GSM416753)
HeLa. (hela)		SRR191598(GSM715708)
79genomic small RNA (size selected RNA from t. (breast)		SRR330908(SRX091746)
tissue: normal skindisease state: normal. (skin)		DRR000561(DRX000319)
Isolation of RNA following immunoprecipitatio. (ago2 cell line)		SRR330900(SRX091738)
tissue: skin psoriatic uninvolveddisease stat. (skin)		SRR033722(GSM497067)
KMS12 cell line (KMS12). (B cell)		SRR330881(SRX091719)
tissue: skin psoriatic uninvolveddisease stat. (skin)		TAX577746(Rovira)
total RNA. (breast)		GSM450607(GSM450607)
miRNA sequencing raw reads from post-mortem s. (brain)		SRR342894(SRX096790)
small RNA seq of Right atrial tissue. (heart)		SRR330906(SRX091744)
tissue: normal skindisease state: normal. (skin)		GSM450601(GSM450601)
miRNA sequencing raw reads from post-mortem s. (brain)		SRR330882(SRX091720)
tissue: skin psoriatic uninvolveddisease stat. (skin)		GSM450609(GSM450609)
miRNA sequencing raw reads from post-mortem s. (brain)		GSM1105753INPUT(GSM1105753)
small RNA sequencing data. (hela)		DRR000558(DRX000316)
"THP-1 whole cell RNA, after 3 day treatment . (cell line)		SRR330923(SRX091761)
tissue: normal skindisease state: normal. (skin)		TAX577739(Rovira)
total RNA. (breast)		SRR038861(GSM458544)
MM466. (cell line)		SRR330861(SRX091699)
tissue: skin psoriatic involveddisease state:. (skin)		SRR038859(GSM458542)
MM386. (cell line)		TAX577742(Rovira)
total RNA. (breast)		SRR037940(GSM510478)
293cand5_rep2. (cell line)		SRR342900(SRX096796)
small RNA seq of Right atrial tissue. (heart)		GSM450608(GSM450608)
miRNA sequencing raw reads from post-mortem s. (brain)		SRR330877(SRX091715)
tissue: skin psoriatic involveddisease state:. (skin)		GSM450600(GSM450600)
miRNA sequencing raw reads from post-mortem s. (brain)		SRR330860(SRX091698)
tissue: skin psoriatic involveddisease state:. (skin)		TAX577744(Rovira)
total RNA. (breast)		SRR326282(GSM769512)
"Dicer mRNA was knocked down using siDicer, t. (cell line)		GSM450599(GSM450599)
miRNA sequencing raw reads from post-mortem s. (brain)		TAX577745(Rovira)
total RNA. (breast)		SRR326281(GSM769511)
"Dicer mRNA was knocked down using siDicer, c. (cell line)		SRR330859(SRX091697)
tissue: skin psoriatic involveddisease state:. (skin)		SRR330912(SRX091750)
tissue: normal skindisease state: normal. (skin)		SRR342899(SRX096795)
small RNA seq of Left atrial tissue. (heart)		SRR330867(SRX091705)
tissue: skin psoriatic involveddisease state:. (skin)		SRR330921(SRX091759)
tissue: normal skindisease state: normal. (skin)		SRR039616(GSM531979)
HBV(+) Distal Tissue Sample 1. (liver)		SRR189784SRR040040(GSM532925)
G612N. (cervix)		GSM1105748AGO1(GSM1105748)
small RNA sequencing data. (ago1 hela)		SRR029054(GSM402329)
MCF7_smallRNAseq. (cell line)		SRR094129(GSM651905)
small RNA(18-35nt)small RNA deep sequencing o. (uterus)		SRR037935(GSM510473)
293cand3. (cell line)		SRR330888(SRX091726)
tissue: skin psoriatic uninvolveddisease stat. (skin)		SRR094130(GSM651906)
small RNA(18-35nt)small RNA deep sequencing o. (uterus)		SRR191590(GSM715700)
48genomic small RNA (size selected RNA from t. (breast)		SRR330907(SRX091745)
tissue: normal skindisease state: normal. (skin)		SRR189787SRR039190(GSM494809)
PBMCs were isolated by ficoll gradient from t. (blood)		SRR330922(SRX091760)
tissue: normal skindisease state: normal. (skin)		SRR039618(GSM531981)
HBV(+) Side Tissue Sample 1. (liver)		SRR330910(SRX091748)
tissue: normal skindisease state: normal. (skin)		SRR330890(SRX091728)
tissue: skin psoriatic uninvolveddisease stat. (skin)		SRR342901(SRX096797)
small RNA seq of Left atrial tissue. (heart)		SRR191492(GSM715602)
154genomic small RNA (size selected RNA from . (breast)		SRR330864(SRX091702)
tissue: skin psoriatic involveddisease state:. (skin)		SRR060984(GSM569188)
Human plasma cell [09-001]. (cell line)		SRR191606(GSM715716)
84genomic small RNA (size selected RNA from t. (breast)		SRR191589(GSM715699)
69genomic small RNA (size selected RNA from t. (breast)		SRR040023(GSM532908)
G575T. (cervix)		SRR033716(GSM497061)
Mentle Cell Lymphoma (MCL114). (B cell)		SRR330904(SRX091742)
tissue: normal skindisease state: normal. (skin)		SRR039192(GSM494811)
K562 cell line is derived from a CML patient . (cell line)		SRR033721(GSM497066)
Ly3 cell line (Ly3). (B cell)		SRR038858(GSM458541)
MEL202. (cell line)		SRR033727(GSM497072)
HIV-positive DL (HIV412). (B cell)		TAX577741(Rovira)
total RNA. (breast)		SRR189780(GSM714640)
cell line: HEK293clip variant: PAR-CLIPenzyma. (cell line)		SRR037938(GSM510476)
293Red. (cell line)		SRR191624(GSM715734)
31genomic small RNA (size selected RNA from t. (breast)		SRR033713(GSM497058)
Burkitt Lymphoma (BL115). (B cell)		GSM532873(GSM532873)
G699N. (cervix)		SRR191600(GSM715710)
90genomic small RNA (size selected RNA from t. (breast)		SRR191564(GSM715674)
87genomic small RNA (size selected RNA from t. (breast)		GSM1105750AGO3(GSM1105750)
small RNA sequencing data. (ago3 hela)		GSM450602(GSM450602)
miRNA sequencing raw reads from post-mortem s. (brain)		SRR191602(GSM715712)
60genomic small RNA (size selected RNA from t. (breast)		SRR039622(GSM531985)
HCV(+) Adjacent Tissue Sample. (liver)		SRR033730(GSM497075)
Lymphoblastic (ALL411). (B cell)		TAX577738(Rovira)
total RNA. (breast)		SRR342897(SRX096793)
small RNA seq of Left atrial tissue. (heart)		SRR038856(GSM458539)
D11. (cell line)		SRR330893(SRX091731)
tissue: skin psoriatic uninvolveddisease stat. (skin)		SRR039619(GSM531982)
HBV(+) HCC Tissue Sample 1. (liver)		SRR330866(SRX091704)
tissue: skin psoriatic involveddisease state:. (skin)		SRR342898(SRX096794)
small RNA seq of Right atrial tissue. (heart)		SRR040035(GSM532920)
G001T. (cervix)		DRR000560(DRX000318)
Isolation of RNA following immunoprecipitatio. (ago1 cell line)		SRR342896(SRX096792)
small RNA seq of Right atrial tissue. (heart)		SRR330886(SRX091724)
tissue: skin psoriatic uninvolveddisease stat. (skin)		SRR039623(GSM531986)
HCV(+) HCC Tissue Sample. (liver)		SRR330895(SRX091733)
tissue: skin psoriatic uninvolveddisease stat. (skin)		SRR039624(GSM531987)
HBV(-) HCV(-) Adjacent Tissue Sample. (liver)		SRR039611(GSM531974)
Human Normal Liver Tissue Sample 1. (liver)		SRR029125(GSM416754)
U2OS. (cell line)		SRR330919(SRX091757)
tissue: normal skindisease state: normal. (skin)		SRR330884(SRX091722)
tissue: skin psoriatic uninvolveddisease stat. (skin)		SRR330873(SRX091711)
tissue: skin psoriatic involveddisease state:. (skin)
.................................................................................................................................................................................................................................................................................................................................................................................................TTGAACTTCTTCACTGGGGCAGT.................................................23163.0041.0012.007.00-------4.00-1.001.002.001.001.00-2.002.004.00------2.00-------1.00-2.00-2.00----1.00-----1.00-2.001.00--1.00--2.00--1.00--1.00----1.00-1.00-1.00-----------1.00---------1.00-----------1.00----------1.001.00-----1.00----------
.................................................................................................................................................................................................................................................................................................................................................................................................TTGAACTTCTTCACTGGGGCAG..................................................22141.0041.00--3.001.001.00--1.00--2.00-1.002.001.00--1.00------3.00---1.003.00-----3.00----2.00--1.00-2.00---------1.00-1.00-1.00---2.00-1.00--------1.00---1.00-1.00---------1.00-----------------------------1.001.001.00-------------
.................................................................................................................................................................................................................................................................................................................................................................................................TTGAACTTCTTCACTGGGGCAGA.................................................23127.0041.00---1.001.00-1.00-2.00--3.00-------------1.00--1.00--1.00-1.00--------2.00---------1.00-1.00--1.00--------1.00-1.00----------1.00-1.00--1.00-1.001.00-----------1.00-----------------------1.00--1.00---------
.................................................................................................................................................................................................................................................................................................................................................................................................TTGAACTTCTTCACTGGGG.....................................................19114.0014.00-6.00--1.00---2.00---2.00----1.00-------1.00------------------------------------------1.00-------------------------------------------------------------------
.................................................................................................................................................................................................................................................................................................................................................TGTGACCTGGTGGAAGTGGAA...................................................................................................2119.009.00----------------------3.00---------3.00---------------------------1.00----------------1.00----------------1.00-----------------------------------------
.................................................................................................................................................................................................................................................................................................................................................................................................TTGAACTTCTTCACTGGGGCAT..................................................2218.008.00--3.00-------------------------1.00------------------1.00-1.002.00-------------------------------------------------------------------------------------
.................................................................................................................................................................................................................................................................................................................................................................................................TTGAACTTCTTCACTGGGGCA...................................................2118.008.00------2.00-1.00-------------------------------------1.00------2.00-----------1.00---------------------------------------------1.00------------------------
.................................................................................................................................................................................................................................................................................................................................................TGTGACCTGGTGGAAGTGGAAAGA................................................................................................2418.008.00--4.00------------------------1.00----------------------------1.00---------------1.00-----------------------------------1.00---------------------------
.....................................................................................................................................................................................................................................................................................................................................................ACCTGGTGGAAGTGGAAAGACA..............................................................................................2216.006.004.00-------------------------------------------------------------------------------------------------1.00-------------1.00-----------------------
.................................................................................................................................................................................................................................................................................................................................................................................................TTGAACTTCTTCACTGGGGCAGTAT...............................................2516.0041.002.00----------------------------------------1.00--1.00---2.00---------------------------------------------------------------------------------------
..GATGACCTGCAGGAGGCCA....................................................................................................................................................................................................................................................................................................................................................................................................................................................1916.006.00-----6.00----------------------------------------------------------------------------------------------------------------------------------
.........................................................................................................................................................................................................................................................................................................................................................................................TCTTTCTCTTGAACTTCTTCACTG........................................................2415.005.00---3.00---1.00-------------------------------------------------------------------1.00------------------------------------------------------------
.................................................................................................................................................................................................................................................................................................................................................................................................TTGAACTTCTTCACTGGGGCATT.................................................2315.008.00--------------------------------------------------------------2.00----1.00------------------------------------1.00--------1.00----------------------
.................................................................................................................................................................................................................................................................................................................................................................................................TTGAACTTCTTCACTGGGGC....................................................2015.005.00----1.00-----------4.00-----------------------------------------------------------------------------------------------------------------------
...................................................................................................................................................................................................................................................................................................................................................TGACCTGGTGGAAGTGGAAAGA................................................................................................2214.004.00--------------------------1.00----------1.00-1.00---------------------------1.00--------------------------------------------------------------------
.................................................................................................................................................................................................................................................................................................................................................TGTGACCTGGTGGAAGTGGAAAG.................................................................................................2314.004.00----1.00-----------------------------2.00---------------------------------------------------------------------------------------------1.00-------
..................................................................................................................................................................................................................................................................................................................................................GTGACCTGGTGGAAGTGGAAAGA................................................................................................2313.003.00----------------------------------------------------------------------1.00-------------------------1.00-------------------1.00-------------------
.........................................................................................................................................................................................................................................................................................................................................................................................TCTTTCTCTTGAACTTCTTCACT.........................................................2313.003.00-------2.00-------------------------------1.00------------------------------------------------------------------------------------------------
.....................................................................................................................................................................................................................................................................................................................................................................................................ACTTCTTCACTGGGGCAGT.................................................193.000.00-----------------------3.00----------------------------------------------------------------------------------------------------------------
.................................................................................................................................................................................................................................................................................................................................................................................................TTGAACTTCTTCACTGGGGCAGAAA...............................................2513.0041.00------1.00--------------------------------------------------------------------------------------------------------------1.00---------1.00--------
.................................................................................................................................................................................................................................................................................................................................................................................................TTGAACTTCTTCACTGGGGCAA..................................................2212.008.00--------------1.001.00------------------------------------------------------------------------------------------------------------------------
.................................................................................................................................................................................................................................................................................................................................................................................................TTGAACTTCTTCACTGGGGCAAAA................................................2412.008.00-2.00--------------------------------------------------------------------------------------------------------------------------------------
.................................................................................................................................................................................................................................................................................................................................................................................................TTGAACTTCTTCACTGGGGCAGTAG...............................................2512.0041.00-------1.00-----------------1.00--------------------------------------------------------------------------------------------------------------
.............................................................................................................................................................................................................................................................................................................................................................................................................ACTGGGGCAGGACGAGGCAC........................................2012.002.00---------------------2.00------------------------------------------------------------------------------------------------------------------
.........................................................................................................................................................................................................................................................................................................................................................................................................................CGAGGCACGGATCCAGAAG.............................1912.002.00----------2.00-----------------------------------------------------------------------------------------------------------------------------
.................................................................................................................................................................................................................................................................................................................................................................................................TTGAACTTCTTCACTGGGGCAGTT................................................2412.0041.00----------------------------------------------------------------------------------1.00---------------------------1.00-------------------------
................................................................................................................................................................................................................................................................................................................................................................................................................................CGGATCCAGAAGGTGACCAAGCG..................2312.002.00---------------------------------2.00------------------------------------------------------------------------------------------------------
................................................................................................................................................................................................................................................................................................................................................................................................CTTGAACTTCTTCACTGGGGCAG..................................................2312.002.00------1.00-----------------------1.00---------------------------------------------------------------------------------------------------------
.................................................................................................................................................................................................................................................................................................................................................................................................TTGAACTTCTTCACTGGGGCAGC.................................................2312.0041.00------------------2.00---------------------------------------------------------------------------------------------------------------------
................................................................................................................................................................................................................................................GGGAGCAGTGTTGTGTTCT......................................................................................................................................................................................................191.000.00--------------------1.00-------------------------------------------------------------------------------------------------------------------
........................................................................................................................................................................................................................................................................................................................................................................................CTCTTTCTCTTGAACTTCTTCACT.........................................................2411.001.00------------------------------1.00---------------------------------------------------------------------------------------------------------
...................................................................................................................................................................................................................................................................................................................................................TGACCTGGTGGAAGTGGAAAGAT...............................................................................................2311.004.00------------------------------------------------------------------------------------------------------------------------------------1.00---
.AGATGACCTGCAGGAGGCCAACAAGCTCACC.........................................................................................................................................................................................................................................................................................................................................................................................................................................311.000.00--------------------1.00-------------------------------------------------------------------------------------------------------------------
.................................................................................................................................................................................................................................................................................................................................................................................................TTGAACTTCTTCACTGGGGCCGC.................................................2311.005.00----1.00-----------------------------------------------------------------------------------------------------------------------------------
...........................................................................................................................................................................................TGGGAGGAGGAGCACGAGC...........................................................................................................................................................................................................................................................191.000.00----------------------------------------------------------------------------------------------------------1.00-----------------------------
...........................................................................................................................................................................................................................................................................................................................................................................................................................AGGCACGGATCCAGAGG.............................171.000.00--------------------1.00-------------------------------------------------------------------------------------------------------------------
..................................................................................................................................................................................................................................................................................................................................................GTGACCTGGTGGAAGTGGAAAGAC...............................................................................................2411.001.00---------------------------1.00------------------------------------------------------------------------------------------------------------
.................................................................................................................................................................................................................................................................................................................................................................................................TTGAACTTCTTCACTGGGGCAGAAT...............................................2511.0041.00---------------1.00------------------------------------------------------------------------------------------------------------------------
........................................................................................................................................................................................................................................................................................................................................................TGGTGGAAGTGGAAATTGT..............................................................................................191.000.00--------------------------------------------1.00-------------------------------------------------------------------------------------------
....................................................................................................................................................................................................................................................................................................................................................GACCTGGTGGAAGTGCTT...................................................................................................181.000.00-----------------------------------------1.00----------------------------------------------------------------------------------------------
....................................................................TTCAGGCACGGGGTGAAT...................................................................................................................................................................................................................................................................................................................................................................................181.000.00-----------------------------------------------1.00----------------------------------------------------------------------------------------
...........CAGGAGGCCAACAAGCTTGT..........................................................................................................................................................................................................................................................................................................................................................................................................................................201.000.00-----------------------------------------------------------------------------------------1.00----------------------------------------------
.................................................................................................................................................................................................................................................................................................................................................................................................TTGAACTTCTTCACTGGGGAA...................................................2111.0014.00--------------1.00-------------------------------------------------------------------------------------------------------------------------
.................................................................................................................................................................................................................................................................................................................................................................................................TTGAACTTCTTCACTGGGGCAAT.................................................2311.008.00-------------------------------1.00--------------------------------------------------------------------------------------------------------
.................................................................................................................................................................................................................................................................................................................................................TGTGACCTGGTGGAAGTGGA....................................................................................................2011.001.00------------------------------------------------------------1.00---------------------------------------------------------------------------
.................................................................................................................................................................................................................................................................................................................................................................................................TTGAACTTCTTCACTGGGGCAGATT...............................................2511.0041.00---------------------------------------------------------------------------------------------1.00------------------------------------------
.................................................................................................................................................................................................................................................................................................................................................................................................TTGAACTTCTTCACTGGGGATT..................................................2211.0014.00------------------------------------------------------------------------------------------------------------------1.00---------------------
.................................................................................................................................................................................................................................................................................................................................................................................................TTGAACTTCTTCACTGGGGCAGTA................................................2411.0041.00--------------------------------------------------------1.00-------------------------------------------------------------------------------
.................................................................................................................................................................................................................................................................................................................................................................................................TTGAACTTCTTCACTGGGGCTC..................................................2211.005.00-----------------------------------------------------------1.00----------------------------------------------------------------------------
..GATGACCTGCAGGAGGCCAACA.................................................................................................................................................................................................................................................................................................................................................................................................................................................2211.001.00-------------------------------------------------------------------------------------------1.00--------------------------------------------
.................................................................................................................................................................................................................................................................................................................................................................................................TTGAACTTCTTCACTGGGGCAGAA................................................2411.0041.00-------------------------------------------------------------1.00--------------------------------------------------------------------------
...............................................................................................................................................................................................................................................................................................................................................GGTGTGACCTGGTGGAAGTGGAAA..................................................................................................2411.001.00-----------------------------------------------------------------------------------------------------------------------------------1.00----
........................................................................................................................................................................................................................................................................................................................................................................................................................................GAAGGTGACCAAGCGTCTGCA............2111.001.00-------------------------------------------------------------------------------------------------------1.00--------------------------------
....................................CCATGGTGAAGGAAGACG...................................................................................................................................................................................................................................................................................................................................................................................................................181.000.00-------------------------------------------------------------------------------------------------1.00--------------------------------------
.........................................................................................................................................................................................................................................................................................................................................................................................TCTTTCTCTTGAACTTCTTCACTGG.......................................................2511.001.00----1.00-----------------------------------------------------------------------------------------------------------------------------------
...................................................................................................................................................................................................................................................................................................................................................................................ACGCTCTCTTTCTCTACA....................................................................181.000.00-------------------------------------------------------------------------------------------------------------1.00--------------------------
.................................................................................................................................................................................................................................................................................................................................................................................................TTGAACTTCTTCACTGGGGCCGT.................................................2311.005.00-----------------------------------------------------------------------------------1.00----------------------------------------------------
.................................................................................................................................................................................................................................................................................................................................................................................................TTGAACTTCTTCACTGGGGCAGTTTT..............................................2611.0041.00---------------------------------------------------------------------------------------------------------------------------------1.00------
...........................................................................................................................................................................................................................................................................................................................................................................................TTTCTCTTGAACTTCTTCACTGG.......................................................2311.001.00------------------------------------------------------1.00---------------------------------------------------------------------------------
.................................................................................................................................................................................................................................................................................................................................................................................................TTGAACTTCTTCACTGGGGCAAA.................................................2311.008.00-------------------------------------1.00--------------------------------------------------------------------------------------------------
.................................................................................................................................................................................................................................................................................................................................................................................................TTGAACTTCTTCACTGGGGCAATT................................................2411.008.00--------------------------------------------------------------------------------------------1.00-------------------------------------------
.....GACCTGCAGGAGGCCAACTGGT..............................................................................................................................................................................................................................................................................................................................................................................................................................................221.000.00----------------------------------------------------------------------------------------------------------------------------------1.00-----
.............................................................................................................................................................................................................................................................................................................................................................................................................................GCACGGATCCAGAAGGTGACCAAGCG..................2611.001.00---------------------------------------------------------------------1.00------------------------------------------------------------------
.....................................................................................................................GCCCCGGACACGGGCAGG..................................................................................................................................................................................................................................................................................................................................181.000.00----------------------------------------------------------------1.00-----------------------------------------------------------------------
................................................................................................................................................................................................................................................GGGAGCAGTGTTGTGAAAGCAGAAGTATAGAC.........................................................................................................................................................................................3211.001.00------1.00---------------------------------------------------------------------------------------------------------------------------------
............................................................................................................................................................................................................................................................................................................................................................................................................................GGCACGGATCCAGAA..............................1511.001.00-------------------------------1.00--------------------------------------------------------------------------------------------------------
.........................................................................................................................................................................................................................................................................................................................................................................................TCTTTCTCTTGAACTTCACTG...........................................................211.000.00---1.00------------------------------------------------------------------------------------------------------------------------------------
...ATGACCTGCAGGAGGCCA....................................................................................................................................................................................................................................................................................................................................................................................................................................................1811.001.00-----------------------------------------------------------------------------------------------------1.00----------------------------------
................................................................................................................................................................................................................................................................................................................................................................................................CTTGAACTTCTTCACTGGGGCAGTA................................................2511.002.00------------------------------1.00---------------------------------------------------------------------------------------------------------
.................................................................................................................................................................................................................................................................................................................................................................................................TTGAACTTCTTCACTGGGGCATAT................................................2411.008.00------------------------------------------------------------------1.00---------------------------------------------------------------------
......................................................................................................................................................................................................................................................................................................................................................................................................................................CAGAAGGTGACCAAGCGTCTGCACACG........2711.001.00----------------------------------------------------------------------------------------------------1.00-----------------------------------
.................................................................................................................................................................................................................................................................................................................................................................................................TTGAACTTCTTCACTGGGGCAGAT................................................2411.0041.00---------------1.00------------------------------------------------------------------------------------------------------------------------
..................................................................................................................................................................................................................................................................................................................................................................................................................................GATCCAGAAGGTGACCAAGCGTCT...............2411.001.00-------------------------------------------------------------------------------------------------------------------1.00--------------------
...................................................................................................................................................................................................................................................................................................................................................TGACCTGGTGGAAGTGGACA..................................................................................................201.000.00------------------------------------------------------------------------------------------------------1.00---------------------------------
.................................................................................................................................................................................................................................................................................................................................................TGTGACCTGGTGGAAGTGGAAAGT................................................................................................2411.004.00---------------------------1.00------------------------------------------------------------------------------------------------------------
.................................................................................................................................................................................................................................................................................................................................................................................................TTGAACTTCTTCACTGGGGAAGT.................................................2311.0014.00---------1.00------------------------------------------------------------------------------------------------------------------------------
.........................................................................................................................................................................................................................AGCACGGAAGAGAGG.................................................................................................................................................................................................................................1530.670.67--------------------0.67-------------------------------------------------------------------------------------------------------------------

Antisense strand
CAGATGACCTGCAGGAGGCCAACAAGCTCATCAAGTCCATGGTGAAGGAAGTGAGTGGGCCCCGGTCCTTCAGGCACGGGGTGGAGGAGCCCATGGCCACACAGCAGAAGCCGCTTTGCCCCGGACACGGGCCTGTTTTGTTCTCCCCTGCTGCCAGCTGCCCTACCTGTGCCCCGGTGGCTGAGAGTGGGAGGAGGAGCACAATAGCTTCCGCGGGAGCACGGAAGAGAGGAGTGGGTTGGGAGCAGTGTTGTGAAAGCAGAAGTATAGACTGGGCCCCAGGCACCCCACACTGAAAGGAGCTTCCGAGCGTCTGTACTTGTGTTGTGGGGTAAGGTGTGACCTGGTGGAAGTGGAAAGACAGTCAAGTGACGCTCTCTTTCTCTTGAACTTCTTCACTGGGGCAGGACGAGGCACGGATCCAGAAGGTGACCAAGCGTCTGCACACGTTAGAGGA
...................................................................................................................................................................................................................................................................................................................................................((.((..(((((((((((((((..(((....)))....))))))).....)))))..)))..)).))...................................................
............................................................................................................................................................................................................................................................................................................................................333.......................................................................407................................................
SizePerfect hitTotal NormPerfect NormSRR387910(GSM843862)
antibody for ip: Ago2. (ago2 cell line)		SRR037942(GSM510480)
293DroshaTN_cand5. (cell line)		SRR039625(GSM531988)
HBV(-) HCV(-) HCC Tissue Sample. (liver)		SRR189782SRR326280(GSM769510)
total cell content of unperturbed cells was s. (cell line)		SRR207110(GSM721072)
Nuclear RNA. (cell line)		DRR000555(DRX000313)
"THP-1 whole cell RNA, no treatment". (cell line)		SRR326279(GSM769509)
cytoplasmic fraction was isolated using PARIS. (cell line)		SRR553573(SRX182779)
source: Cerebellum. (Cerebellum)		SRR037941(GSM510479)
293DroshaTN. (cell line)		RoviraIPAgo2(Rovira)
total RNA. (ago2 breast)		SRR330879(SRX091717)
tissue: skin psoriatic involveddisease state:. (skin)		SRR553572(SRX182778)
source: Frontal Cortex. (Frontal Cortex)		DRR000556(DRX000314)
"THP-1 whole cell RNA, after 3 day treatment . (cell line)		SRR330903(SRX091741)
tissue: skin psoriatic uninvolveddisease stat. (skin)		SRR330885(SRX091723)
tissue: skin psoriatic uninvolveddisease stat. (skin)		SRR207114(GSM721076)
"IP against AGO 1 & 2, RRP40 knockdown". (ago1/2 RRP40 cell line)		SRR207115(GSM721077)
XRN1&2 knockdown. (XRN1/XRN2 cell line)		SRR189786SRR037939(GSM510477)
293cand5_rep1. (cell line)		SRR189779(GSM714639)
cell line: HEK293clip variant: PAR-CLIPenzyma. (cell line)		SRR033712(GSM497057)
Burkitt Lymphoma (BL510). (B cell)		SRR033719(GSM497064)
6hr Activated B cell line (ABC158). (B cell)		SRR037936(GSM510474)
293cand1. (cell line)		SRR015363(GSM380328)
Germinal Center B cell (GC40). (B cell)		SRR553575(SRX182781)
source: Kidney. (Kidney)		SRR040028(GSM532913)
G026N. (cervix)		SRR207113(GSM721075)
IP against AGO 1 & 2. (ago1/2 cell line)		DRR000557(DRX000315)
"THP-1 whole cell RNA, after 3 day treatment . (cell line)		SRR037937(GSM510475)
293cand2. (cell line)		SRR095854(SRX039177)
"miRNA were isolated from FirstChoice Human B. (brain)		SRR330896(SRX091734)
tissue: skin psoriatic uninvolveddisease stat. (skin)		SRR033720(GSM497065)
EBV activated B cell line (EBV159). (B cell)		SRR330902(SRX091740)
tissue: skin psoriatic uninvolveddisease stat. (skin)		SRR330915(SRX091753)
tissue: normal skindisease state: normal. (skin)		SRR037944(GSM510482)
293DcrTN_cand5. (cell line)		SRR029124(GSM416753)
HeLa. (hela)		SRR191598(GSM715708)
79genomic small RNA (size selected RNA from t. (breast)		SRR330908(SRX091746)
tissue: normal skindisease state: normal. (skin)		DRR000561(DRX000319)
Isolation of RNA following immunoprecipitatio. (ago2 cell line)		SRR330900(SRX091738)
tissue: skin psoriatic uninvolveddisease stat. (skin)		SRR033722(GSM497067)
KMS12 cell line (KMS12). (B cell)		SRR330881(SRX091719)
tissue: skin psoriatic uninvolveddisease stat. (skin)		TAX577746(Rovira)
total RNA. (breast)		GSM450607(GSM450607)
miRNA sequencing raw reads from post-mortem s. (brain)		SRR342894(SRX096790)
small RNA seq of Right atrial tissue. (heart)		SRR330906(SRX091744)
tissue: normal skindisease state: normal. (skin)		GSM450601(GSM450601)
miRNA sequencing raw reads from post-mortem s. (brain)		SRR330882(SRX091720)
tissue: skin psoriatic uninvolveddisease stat. (skin)		GSM450609(GSM450609)
miRNA sequencing raw reads from post-mortem s. (brain)		GSM1105753INPUT(GSM1105753)
small RNA sequencing data. (hela)		DRR000558(DRX000316)
"THP-1 whole cell RNA, after 3 day treatment . (cell line)		SRR330923(SRX091761)
tissue: normal skindisease state: normal. (skin)		TAX577739(Rovira)
total RNA. (breast)		SRR038861(GSM458544)
MM466. (cell line)		SRR330861(SRX091699)
tissue: skin psoriatic involveddisease state:. (skin)		SRR038859(GSM458542)
MM386. (cell line)		TAX577742(Rovira)
total RNA. (breast)		SRR037940(GSM510478)
293cand5_rep2. (cell line)		SRR342900(SRX096796)
small RNA seq of Right atrial tissue. (heart)		GSM450608(GSM450608)
miRNA sequencing raw reads from post-mortem s. (brain)		SRR330877(SRX091715)
tissue: skin psoriatic involveddisease state:. (skin)		GSM450600(GSM450600)
miRNA sequencing raw reads from post-mortem s. (brain)		SRR330860(SRX091698)
tissue: skin psoriatic involveddisease state:. (skin)		TAX577744(Rovira)
total RNA. (breast)		SRR326282(GSM769512)
"Dicer mRNA was knocked down using siDicer, t. (cell line)		GSM450599(GSM450599)
miRNA sequencing raw reads from post-mortem s. (brain)		TAX577745(Rovira)
total RNA. (breast)		SRR326281(GSM769511)
"Dicer mRNA was knocked down using siDicer, c. (cell line)		SRR330859(SRX091697)
tissue: skin psoriatic involveddisease state:. (skin)		SRR330912(SRX091750)
tissue: normal skindisease state: normal. (skin)		SRR342899(SRX096795)
small RNA seq of Left atrial tissue. (heart)		SRR330867(SRX091705)
tissue: skin psoriatic involveddisease state:. (skin)		SRR330921(SRX091759)
tissue: normal skindisease state: normal. (skin)		SRR039616(GSM531979)
HBV(+) Distal Tissue Sample 1. (liver)		SRR189784SRR040040(GSM532925)
G612N. (cervix)		GSM1105748AGO1(GSM1105748)
small RNA sequencing data. (ago1 hela)		SRR029054(GSM402329)
MCF7_smallRNAseq. (cell line)		SRR094129(GSM651905)
small RNA(18-35nt)small RNA deep sequencing o. (uterus)		SRR037935(GSM510473)
293cand3. (cell line)		SRR330888(SRX091726)
tissue: skin psoriatic uninvolveddisease stat. (skin)		SRR094130(GSM651906)
small RNA(18-35nt)small RNA deep sequencing o. (uterus)		SRR191590(GSM715700)
48genomic small RNA (size selected RNA from t. (breast)		SRR330907(SRX091745)
tissue: normal skindisease state: normal. (skin)		SRR189787SRR039190(GSM494809)
PBMCs were isolated by ficoll gradient from t. (blood)		SRR330922(SRX091760)
tissue: normal skindisease state: normal. (skin)		SRR039618(GSM531981)
HBV(+) Side Tissue Sample 1. (liver)		SRR330910(SRX091748)
tissue: normal skindisease state: normal. (skin)		SRR330890(SRX091728)
tissue: skin psoriatic uninvolveddisease stat. (skin)		SRR342901(SRX096797)
small RNA seq of Left atrial tissue. (heart)		SRR191492(GSM715602)
154genomic small RNA (size selected RNA from . (breast)		SRR330864(SRX091702)
tissue: skin psoriatic involveddisease state:. (skin)		SRR060984(GSM569188)
Human plasma cell [09-001]. (cell line)		SRR191606(GSM715716)
84genomic small RNA (size selected RNA from t. (breast)		SRR191589(GSM715699)
69genomic small RNA (size selected RNA from t. (breast)		SRR040023(GSM532908)
G575T. (cervix)		SRR033716(GSM497061)
Mentle Cell Lymphoma (MCL114). (B cell)		SRR330904(SRX091742)
tissue: normal skindisease state: normal. (skin)		SRR039192(GSM494811)
K562 cell line is derived from a CML patient . (cell line)		SRR033721(GSM497066)
Ly3 cell line (Ly3). (B cell)		SRR038858(GSM458541)
MEL202. (cell line)		SRR033727(GSM497072)
HIV-positive DL (HIV412). (B cell)		TAX577741(Rovira)
total RNA. (breast)		SRR189780(GSM714640)
cell line: HEK293clip variant: PAR-CLIPenzyma. (cell line)		SRR037938(GSM510476)
293Red. (cell line)		SRR191624(GSM715734)
31genomic small RNA (size selected RNA from t. (breast)		SRR033713(GSM497058)
Burkitt Lymphoma (BL115). (B cell)		GSM532873(GSM532873)
G699N. (cervix)		SRR191600(GSM715710)
90genomic small RNA (size selected RNA from t. (breast)		SRR191564(GSM715674)
87genomic small RNA (size selected RNA from t. (breast)		GSM1105750AGO3(GSM1105750)
small RNA sequencing data. (ago3 hela)		GSM450602(GSM450602)
miRNA sequencing raw reads from post-mortem s. (brain)		SRR191602(GSM715712)
60genomic small RNA (size selected RNA from t. (breast)		SRR039622(GSM531985)
HCV(+) Adjacent Tissue Sample. (liver)		SRR033730(GSM497075)
Lymphoblastic (ALL411). (B cell)		TAX577738(Rovira)
total RNA. (breast)		SRR342897(SRX096793)
small RNA seq of Left atrial tissue. (heart)		SRR038856(GSM458539)
D11. (cell line)		SRR330893(SRX091731)
tissue: skin psoriatic uninvolveddisease stat. (skin)		SRR039619(GSM531982)
HBV(+) HCC Tissue Sample 1. (liver)		SRR330866(SRX091704)
tissue: skin psoriatic involveddisease state:. (skin)		SRR342898(SRX096794)
small RNA seq of Right atrial tissue. (heart)		SRR040035(GSM532920)
G001T. (cervix)		DRR000560(DRX000318)
Isolation of RNA following immunoprecipitatio. (ago1 cell line)		SRR342896(SRX096792)
small RNA seq of Right atrial tissue. (heart)		SRR330886(SRX091724)
tissue: skin psoriatic uninvolveddisease stat. (skin)		SRR039623(GSM531986)
HCV(+) HCC Tissue Sample. (liver)		SRR330895(SRX091733)
tissue: skin psoriatic uninvolveddisease stat. (skin)		SRR039624(GSM531987)
HBV(-) HCV(-) Adjacent Tissue Sample. (liver)		SRR039611(GSM531974)
Human Normal Liver Tissue Sample 1. (liver)		SRR029125(GSM416754)
U2OS. (cell line)		SRR330919(SRX091757)
tissue: normal skindisease state: normal. (skin)		SRR330884(SRX091722)
tissue: skin psoriatic uninvolveddisease stat. (skin)		SRR330873(SRX091711)
tissue: skin psoriatic involveddisease state:. (skin)
................................................................................................................................................................................................................................................................................................................................................................................................CTTGAACTTCTTCACCAAG...................................................... 191.000.00----------------------------------------------------------------------------1.00-----------------------------------------------------------
............................................................................................................................................TTCTCCCCTGCTGCCATTGG......................................................................................................................................................................................................................................................................................................... 201.000.00---1.00------------------------------------------------------------------------------------------------------------------------------------
....................................................................................................................................................TGCTGCCAGCTGCCCTTGGG................................................................................................................................................................................................................................................................................................. 201.000.00---------------------------------------------------------------------------------------------------------1.00------------------------------
.....................................................................................................................................TGTTTTGTTCTCCCCAAAT................................................................................................................................................................................................................................................................................................................. 191.000.00----------------------------------------------------------------------------------------------------------------------------1.00-----------
..........................................................GCCCCGGTCCTTCAGGCTTT........................................................................................................................................................................................................................................................................................................................................................................................... 201.000.00----------------------------------------------------------------------------------------1.00-----------------------------------------------
.........................CCATGGACTTGATGAGC............................................................................................................................................................................................................................................................................................................................................................................................................................... 1711.001.00----------------------------------------------1.00-----------------------------------------------------------------------------------------
.......................................................................................................................................................................................................................GGAGCACGGAAGAGATGGC............................................................................................................................................................................................................................... 191.000.00---1.00------------------------------------------------------------------------------------------------------------------------------------
.........................................................................................................................................................GGGGCACAGGTAGGGCAGCTGG.......................................................................................................................................................................................................................................................................................... 2211.001.00---------------------1.00------------------------------------------------------------------------------------------------------------------
..........................................................CTGAAGGACCGGGGC................................................................................................................................................................................................................................................................................................................................................................................................ 1540.500.50-------------------------------------------------------------------------------------------------------------------------------------0.250.25-
..........................................................GCCCCGGTCCTTCAGT............................................................................................................................................................................................................................................................................................................................................................................................... 160.500.00----------------------------------------------------------------------0.25--------------------------------------------------------------0.25--
.....................................................................................................................................................................................................................................................................................................................................................................................TCAAGAGAAAGAGAGC.................................................................... 1690.110.11---------------------------------------------------------------------------------------------------------------------------------------0.11