| (1) AGO2.ip | (1) BRAIN | (5) BREAST | (7) CELL-LINE | (4) CERVIX | (1) HEART | (2) LIVER | (4) OTHER | (3) SKIN | (1) XRN.ip |
| CACTGGGAGTGGCACCCGTGTCCTGTTCAGAAATGCCCAGTTGGCCCAGGAGGGTCCTGGAGAGACTCTAGCCCCAGGGTCCTGCATCCTGCCCCCTTCCTTAGTGGGCAGTTTGTGTGAAATCAAACCAAAAAGGCATCCTGAGTGGTGGGAGAGCCAGAGGACAGCTCCCTGGGTCTGACTTGTGGTTTTGCCACCAGCATCAACGTCAATGACACCTGCAAGTATCACTGCGGCCAAGACCTCAACA .................................................................................................................................................((((((.(((((((.(((.(((((.....)).))).))).))))))).))))))................................................... ............................................................................................................................................141........................................................200................................................ | Size | Perfect hit | Total Norm | Perfect Norm | SRR387910(GSM843862) antibody for ip: Ago2. (ago2 cell line) | SRR189779(GSM714639) cell line: HEK293clip variant: PAR-CLIPenzyma. (cell line) | SRR207116(GSM721078) Nuclear RNA. (cell line) | SRR040039(GSM532924) G531T. (cervix) | SRR189782 | SRR039623(GSM531986) HCV(+) HCC Tissue Sample. (liver) | SRR189784 | TAX577588(Rovira) total RNA. (breast) | SRR040010(GSM532895) G529N. (cervix) | SRR039615(GSM531978) Severe Chronic Hepatitis B Liver Tissue. (liver) | TAX577746(Rovira) total RNA. (breast) | SRR189787 | SRR040028(GSM532913) G026N. (cervix) | SRR191608(GSM715718) 193genomic small RNA (size selected RNA from . (breast) | SRR039635(GSM518472) THP1_nuc_sRNAs. (cell line) | SRR191624(GSM715734) 31genomic small RNA (size selected RNA from t. (breast) | SRR342897(SRX096793) small RNA seq of Left atrial tissue. (heart) | GSM450597(GSM450597) miRNA sequencing raw reads from post-mortem s. (brain) | SRR040035(GSM532920) G001T. (cervix) | SRR343337 | TAX577743(Rovira) total RNA. (breast) | SRR189781(GSM714641) cell line: HEK293clip variant: PAR-CLIPenzyma. (cell line) | SRR330902(SRX091740) tissue: skin psoriatic uninvolveddisease stat. (skin) | DRR000555(DRX000313) "THP-1 whole cell RNA, no treatment". (cell line) | SRR207115(GSM721077) XRN1&2 knockdown. (XRN1/XRN2 cell line) | SRR330904(SRX091742) tissue: normal skindisease state: normal. (skin) | SRR330895(SRX091733) tissue: skin psoriatic uninvolveddisease stat. (skin) |
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| .................................................................................................................................................TGGTGGGAGAGCCAGAGGAC..................................................................................... | 20 | 1 | 17.00 | 17.00 | 17.00 | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - |
| ...............................................................................................................................................AGTGGTGGGAGAGCCAGAGGAC..................................................................................... | 22 | 1 | 8.00 | 8.00 | 7.00 | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | 1.00 | - | - | - | - | - | - | - | - |
| ................................................................................................................................................GTGGTGGGAGAGCCAGAGGACA.................................................................................... | 22 | 1 | 5.00 | 5.00 | 3.00 | - | - | - | - | - | - | - | - | 1.00 | - | - | - | - | 1.00 | - | - | - | - | - | - | - | - | - | - | - | - |
| ...............................................................................................................................................AGTGGTGGGAGAGCCAGAGGACT.................................................................................... | 23 | 1 | 5.00 | 8.00 | 5.00 | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - |
| ................................................................................................................................................GTGGTGGGAGAGCCAGAGGACAA................................................................................... | 23 | 1 | 4.00 | 5.00 | 4.00 | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - |
| .................................................................................................................................................TGGTGGGAGAGCCAGAGGACAAT.................................................................................. | 23 | 1 | 4.00 | 2.00 | 4.00 | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - |
| ................................................................................................................................................GTGGTGGGAGAGCCAGAGGAC..................................................................................... | 21 | 1 | 4.00 | 4.00 | 3.00 | - | - | - | - | - | - | - | 1.00 | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - |
| ...............................................................................................................................................AGTGGTGGGAGAGCCAGAGGACA.................................................................................... | 23 | 1 | 3.00 | 3.00 | 3.00 | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - |
| ................................................................................................................................................GTGGTGGGAGAGCCAGAGGACAG................................................................................... | 23 | 1 | 3.00 | 3.00 | 3.00 | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - |
| .................................................................................................................................................TGGTGGGAGAGCCAGAGGACA.................................................................................... | 21 | 1 | 2.00 | 2.00 | 2.00 | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - |
| ................................................................................................................................................GTGGTGGGAGAGCCAGAGGACAGT.................................................................................. | 24 | 1 | 2.00 | 3.00 | 2.00 | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - |
| ...............................................................................................................................................AGTGGTGGGAGAGCCAGAGGAGA.................................................................................... | 23 | 1 | 2.00 | 1.00 | 2.00 | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - |
| .................................................................................................................................................TGGTGGGAGAGCCAGAGGACAGA.................................................................................. | 23 | 1 | 2.00 | 1.00 | 2.00 | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - |
| .........................................................................................................................................ATCCTGAGTGGTGGGAGA............................................................................................... | 18 | 1 | 1.00 | 1.00 | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | 1.00 | - | - | - | - | - |
| ............................................................................................................................................................................TGGGTCTGACTTGTGGTTTTGCC....................................................... | 23 | 1 | 1.00 | 1.00 | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | 1.00 | - | - | - | - | - | - | - | - | - | - | - |
| ..................................GCCCAGTTGGCCCAGGAGTCCC.................................................................................................................................................................................................. | 22 | 1.00 | 0.00 | - | - | - | - | - | - | - | - | - | - | 1.00 | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | |
| ..................................GCCCAGTTGGCCCAGGTATG.................................................................................................................................................................................................... | 20 | 1.00 | 0.00 | - | - | - | 1.00 | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | |
| ..................................GCCCAGTTGGCCCAGGAATAA................................................................................................................................................................................................... | 21 | 1.00 | 0.00 | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | 1.00 | - | - | - | - | - | - | |
| ....................................................................................................TTAGTGGGCAGTTTGTGTGAAAT............................................................................................................................... | 23 | 1 | 1.00 | 1.00 | - | - | - | - | - | 1.00 | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - |
| ...............................................................................................................................................AGTGGTGGGAGAGCCAGAGGA...................................................................................... | 21 | 1 | 1.00 | 1.00 | - | - | - | - | - | - | - | - | - | - | - | - | 1.00 | - | - | - | - | - | - | - | - | - | - | - | - | - | - |
| .................................................................................................................................................TGGTGGGAGAGCCAGAGGACAG................................................................................... | 22 | 1 | 1.00 | 1.00 | 1.00 | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - |
| ....................................................................................................TTAGTGGGCAGTTTGTGTGGTT................................................................................................................................ | 22 | 1.00 | 0.00 | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | 1.00 | - | - | - | - | - | - | - | - | - | |
| ..............................................................................................................................................GAGTGGTGGGAGAGCGTTC......................................................................................... | 19 | 1.00 | 0.00 | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | 1.00 | - | - | - | - | - | - | - | |
| ..................................GCCCAGTTGGCCCAGGAGTTCC.................................................................................................................................................................................................. | 22 | 1.00 | 0.00 | - | - | - | - | - | - | - | 1.00 | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | |
| ....................TCCTGTTCAGAAATGCTGCA.................................................................................................................................................................................................................. | 20 | 1.00 | 0.00 | - | - | - | - | - | - | - | - | - | - | - | 1.00 | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | |
| ..................................GCCCAGTTGGCCCAGGAAT..................................................................................................................................................................................................... | 19 | 1.00 | 0.00 | - | - | - | 1.00 | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | |
| .................................................................................................................................................TGGTGGGAGAGCCAGAGGACAGT.................................................................................. | 23 | 1 | 1.00 | 1.00 | 1.00 | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - |
| ...............................................................................................................................................AGTGGTGGGAGAGCCAGAGGAA..................................................................................... | 22 | 1 | 1.00 | 1.00 | 1.00 | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - |
| ..................................GCCCAGTTGGCCCAGGCTT..................................................................................................................................................................................................... | 19 | 1.00 | 0.00 | - | - | - | 1.00 | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | |
| .....................................................................................................................................................GGGAGAGCCAGAGGACACAA................................................................................. | 20 | 1.00 | 0.00 | - | - | - | - | - | - | 1.00 | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - |
| CACTGGGAGTGGCACCCGTGTCCTGTTCAGAAATGCCCAGTTGGCCCAGGAGGGTCCTGGAGAGACTCTAGCCCCAGGGTCCTGCATCCTGCCCCCTTCCTTAGTGGGCAGTTTGTGTGAAATCAAACCAAAAAGGCATCCTGAGTGGTGGGAGAGCCAGAGGACAGCTCCCTGGGTCTGACTTGTGGTTTTGCCACCAGCATCAACGTCAATGACACCTGCAAGTATCACTGCGGCCAAGACCTCAACA .................................................................................................................................................((((((.(((((((.(((.(((((.....)).))).))).))))))).))))))................................................... ............................................................................................................................................141........................................................200................................................ | Size | Perfect hit | Total Norm | Perfect Norm | SRR387910(GSM843862) antibody for ip: Ago2. (ago2 cell line) | SRR189779(GSM714639) cell line: HEK293clip variant: PAR-CLIPenzyma. (cell line) | SRR207116(GSM721078) Nuclear RNA. (cell line) | SRR040039(GSM532924) G531T. (cervix) | SRR189782 | SRR039623(GSM531986) HCV(+) HCC Tissue Sample. (liver) | SRR189784 | TAX577588(Rovira) total RNA. (breast) | SRR040010(GSM532895) G529N. (cervix) | SRR039615(GSM531978) Severe Chronic Hepatitis B Liver Tissue. (liver) | TAX577746(Rovira) total RNA. (breast) | SRR189787 | SRR040028(GSM532913) G026N. (cervix) | SRR191608(GSM715718) 193genomic small RNA (size selected RNA from . (breast) | SRR039635(GSM518472) THP1_nuc_sRNAs. (cell line) | SRR191624(GSM715734) 31genomic small RNA (size selected RNA from t. (breast) | SRR342897(SRX096793) small RNA seq of Left atrial tissue. (heart) | GSM450597(GSM450597) miRNA sequencing raw reads from post-mortem s. (brain) | SRR040035(GSM532920) G001T. (cervix) | SRR343337 | TAX577743(Rovira) total RNA. (breast) | SRR189781(GSM714641) cell line: HEK293clip variant: PAR-CLIPenzyma. (cell line) | SRR330902(SRX091740) tissue: skin psoriatic uninvolveddisease stat. (skin) | DRR000555(DRX000313) "THP-1 whole cell RNA, no treatment". (cell line) | SRR207115(GSM721077) XRN1&2 knockdown. (XRN1/XRN2 cell line) | SRR330904(SRX091742) tissue: normal skindisease state: normal. (skin) | SRR330895(SRX091733) tissue: skin psoriatic uninvolveddisease stat. (skin) |
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| ....................................................................................................................................................................CAGCTCCCTGGGTCTGCAGA.................................................................. | 20 | 2.00 | 0.00 | - | - | 2.00 | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | |
| ...............................................................................................................................................................................................TGCCACCAGCATCAACGG......................................... | 18 | 1.00 | 0.00 | - | - | 1.00 | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | |
| ......................................................................................................................................................................GCTCCCTGGGTCTGACGG.................................................................. | 18 | 1.00 | 0.00 | - | 1.00 | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | |
| .................................................................................CTGCATCCTGCCCCCTAA....................................................................................................................................................... | 18 | 1.00 | 0.00 | - | 1.00 | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | |
| ........................GTTCAGAAATGCCCATCTG............................................................................................................................................................................................................... | 19 | 1.00 | 0.00 | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | 1.00 | - | - | - | - | - | - | - | - | - | - | |
| ..................................................................TCTAGCCCCAGGGTCATAG..................................................................................................................................................................... | 19 | 1.00 | 0.00 | - | - | - | - | 1.00 | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | |
| .........................TTCAGAAATGCCCAGTTTAGA............................................................................................................................................................................................................ | 21 | 1.00 | 0.00 | - | - | - | - | - | - | - | - | - | - | - | - | - | 1.00 | - | - | - | - | - | - | - | - | - | - | - | - | - | |
| ....................................................................................................................................................................CAGCTCCCTGGGTCTGGATA.................................................................. | 20 | 1.00 | 0.00 | - | - | - | - | - | 1.00 | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | |
| ........................................................................................CTGCCCCCTTCCTTAAGGA............................................................................................................................................... | 19 | 1.00 | 0.00 | - | 1.00 | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | |
| .................................................................................................................................................................................................................CAATGACACCTGCAAGTCCAT.................... | 21 | 1.00 | 0.00 | - | - | - | - | 1.00 | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | |
| ..........................................................................................CACTAAGGAAGGGGGC................................................................................................................................................ | 16 | 4 | 0.75 | 0.75 | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | 0.25 | - | - | 0.25 | 0.25 |
| ..............................................................................................................................................................................................TTGCCACCAGCATCAACGGC........................................ | 20 | 0.67 | 0.00 | - | - | 0.33 | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | 0.33 | - | - | |
| ......................................................................................................................................................................GCTCCCTGGGTCTGACTCGG................................................................ | 20 | 0.67 | 0.00 | - | 0.67 | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | |
| ......................................................................................................................................................................AGTCAGACCCAGGGAGC................................................................... | 17 | 3 | 0.67 | 0.67 | - | 0.67 | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - |
| ..............................................................................................................................................................................................GTTGATGCTGGTGGCAA........................................... | 17 | 3 | 0.33 | 0.33 | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | 0.33 | - | - | - |
| ......................................................................................................................................................................GCTCCCTGGGTCTGACTGG................................................................. | 19 | 0.33 | 0.00 | - | 0.33 | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | |
| ..........................................................................................ACTAAGGAAGGGGGC................................................................................................................................................. | 15 | 7 | 0.14 | 0.14 | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | 0.14 | - | - | - | - |