ID: uc002jit.1_intron_0_0_chr17_70026993_f.3p
GENE: D43770(1)
chr17:70032986-70033235+


(2)
BREAST 		(10)
CELL-LINE 		(2)
OTHER 		(4)
SKIN

Sense strand
ATAAGAATTCTGGGAGGACACAGACATTCAGTCTACAGGGGACAATATGGAAACAAATGGGCATGGCTCCATTCCAGTAACACTTTATATGCACTGCAATTTAAATTTCATATCGTTTTCATGTCATAAAATATTTTTTATTTGTTTTCCAAACGTTAAAAAACATAAAAACTATCTTTTTTTTTTTTTAATCTCATTAGCCATTCAAAAACAGATGAGATGGGGACAGATTTAACCCAAAGGACATAGT
..................................................................................................................(((((.((((..........((((((..((((.....)))).)))))))))).)))))..............................................................................
..............................................................................................95.......................................................................................................200................................................
SizePerfect hitTotal NormPerfect NormSRR189776(GSM714636)
cell line: HEK293clip variant: CLIPenzymatic . (cell line)		SRR189775(GSM714635)
cell line: HEK293clip variant: CLIPenzymatic . (cell line)		SRR189777(GSM714637)
cell line: HEK293clip variant: PAR-CLIPenzyma. (cell line)		SRR189778(GSM714638)
cell line: HEK293clip variant: PAR-CLIPenzyma. (cell line)		SRR189781(GSM714641)
cell line: HEK293clip variant: PAR-CLIPenzyma. (cell line)		SRR189780(GSM714640)
cell line: HEK293clip variant: PAR-CLIPenzyma. (cell line)		SRR191607(GSM715717)
192genomic small RNA (size selected RNA from . (breast)		SRR444058(SRX128906)
Sample 16cDNABarcode: AF-PP-335: ACG CTC TTC . (skin)		GSM956925PAZD5SRR189782SRR037937(GSM510475)
293cand2. (cell line)		SRR029128(GSM416757)
H520. (cell line)		SRR189779(GSM714639)
cell line: HEK293clip variant: PAR-CLIPenzyma. (cell line)		SRR330917(SRX091755)
tissue: normal skindisease state: normal. (skin)		TAX577744(Rovira)
total RNA. (breast)		SRR330915(SRX091753)
tissue: normal skindisease state: normal. (skin)		SRR060981(GSM569185)
Human centroblast [09-001]. (cell line)		SRR330894(SRX091732)
tissue: skin psoriatic uninvolveddisease stat. (skin)
..............................................................................................................................................................................TCTTTTTTTTTTTTTAATCTACTG....................................................2419.000.009.008.00-1.00-1.00------------
..........................................................................................................................................................................ACTATCTTTTTTTTTTTTCTTG..........................................................2217.000.001.004.004.006.001.001.00------------
..........................................................................................................................................................................ACTATCTTTTTTTTTTTCTTG...........................................................2115.000.001.00-5.008.001.00-------------
..............................................................................................................................................................................TCTTTTTTTTTTTTTAATCCCCG.....................................................239.000.004.003.001.001.00--------------
..........................................................................................................................................................................ACTATCTTTTTTTTTTTTCG............................................................209.000.002.00-7.00---------------
..........................................................................................................................................................................ACTATCTTTTTTTTTTTTTCG...........................................................219.000.002.001.002.003.001.00-------------
...........................................................................................................................................................................CTATCTTTTTTTTTTTTTAAACAG.......................................................246.000.003.002.00-1.00--------------
..........................................................................................................................................................................ACTATCTTTTTTTTTTTCG.............................................................193.000.00--1.002.00--------------
..........................................................................................................................................................................ACTATCTTTTTTTTTTTATG............................................................203.000.001.001.001.00---------------
...........................................................................................................................................................................CTATCTTTTTTTTTTTTTATG..........................................................213.000.001.001.001.00---------------
..........................................................................................................................................................................ACTATCTTTTTTTTTTTTTGT...........................................................212.000.001.00--1.00--------------
...............................................................................................................................................................................CTTTTTTTTTTTTTAATCTCCTG....................................................232.000.001.00-1.00---------------
..........................................................................................................................................................................ACTATCTTTTTTTTTTTTTGTG..........................................................222.000.001.001.00----------------
..........................................................................................................................................................................ACTATCTTTTTTTTTTTTTCTCG.........................................................232.000.00--2.00---------------
...........................................................................................................................................................................CTATCTTTTTTTTTTTTTAAACAT.......................................................242.000.00-2.00----------------
...........................................................................................................................................................................CTATCTTTTTTTTTTTTTAAACG........................................................232.000.00-2.00----------------
.........................................................................................................................................................................AACTATCTTTTTTTTTTTTTGG...........................................................222.000.001.00-1.00---------------
..............................................................................................................................................................................TCTTTTTTTTTTTTTAATCTACTT....................................................242.000.001.001.00----------------
..........................................................................................................................................................................ACTATCTTTTTTTTTTTGTTG...........................................................211.000.001.00-----------------
.............................................................................................................................................................................ATCTTTTTTTTTTTTTAATCCCG......................................................231.000.001.00-----------------
..........................................................................................................................................................................ACTATCTTTTTTTTTTTTATG...........................................................211.000.00---1.00--------------
..........................................................................................................................................................................ACTATCTTTTTTTTTCTGG.............................................................191.000.001.00-----------------
.............................................................................................................................................................................ATCTTTTTTTTTTTTTACGAG........................................................211.000.00-----1.00------------
....................................................................................................................................................................................................................AGATGAGATGGGGACAGGAAT.................211.000.00----------------1.00-
..........................................................................................................................................................................ACTATCTTTTTTTTTTTTTCGTG.........................................................231.000.001.00-----------------
...............................................................................................................................................................................CTTTTTTTTTTTTTAATCCGG......................................................211.000.00-1.00----------------
..........................................................................................................................................................................ACTATCTTTTTTTTTTTTTCCG..........................................................221.000.001.00-----------------
...............................................................................................................................................................................CTTTTTTTTTTTTTAATCCCAT.....................................................221.000.00---1.00--------------
...........................................................................................................................................................................CTATCTTTTTTTTTTTTTAATTTTT......................................................251.000.001.00-----------------
..........................................................................................................................................................................ACTATCTTTTTTTTTTTTTCGG..........................................................221.000.00-1.00----------------
..........................................................................................................................................................................ACTATCTTTTTTTTTTTTCAG...........................................................211.000.00-1.00----------------
..........................................................................................................................................................................ACTATCTTTTTTTTTTTGTG............................................................201.000.00--1.00---------------
..............................................................................................................................................................................TCTTTTTTTTTTTTTAATCTACTA....................................................241.000.001.00-----------------
.............................................................................................................................................................................ATCTTTTTTTTTTTTTAATCTATTG....................................................251.000.00--1.00---------------
...........................................................................................................................................................................CTATCTTTTTTTTTTTTTAACCAT.......................................................241.000.00-1.00----------------
..........................................................................................................................................................................ACTATCTTTTTTTTTTTCGTG...........................................................211.000.00----1.00-------------
.......................................................................................................................................................................AAAACTATCTTTTTTTTTTTTTTTGT.........................................................261.000.00-1.00----------------
......................................................................................................................................................................AAAAACTATCTTTTTGTTT.................................................................191.000.00----1.00-------------
.................................................................................................................................................................................TTTTTTTTTTTTAATCTCATTTAAG................................................251.000.00-1.00----------------
...........................................................................................................................................................................CTATCTTTTTTTTTTTTTAAAG.........................................................221.000.001.00-----------------
..........................................................................................................................................................................ACTATCTTTTTTTTTTTTTCTGG.........................................................231.000.00-1.00----------------
.............................................................................................................................................................................ATCTTTTTTTTTTTTTAATCTCTAG....................................................251.000.00---1.00--------------
..............................................................................................................................................................................TCTTTTTTTTTTTTTAATCGGG......................................................221.000.00-----1.00------------
..........................................................................................................................................................................ACTATCTTTTTTTTTTTCCG............................................................201.000.00--1.00---------------
..............................................................................................................................................................................TCTTTTTTTTTTTTTAATCTATTG....................................................241.000.001.00-----------------
..............................................................................................................................................................................TCTTTTTTTTTTTTTAATCTTCTG....................................................241.000.001.00-----------------
..........................................................................................................................................................................ACTATCTTTTTTTTTTTTTGGG..........................................................221.000.00-1.00----------------
............................................................................................................................................................................TATCTTTTTTTTTTTTTAATCTTTCG....................................................261.000.00---1.00--------------
...........................................................................................................................................................................CTATCTTTTTTTTTTTTTAACG.........................................................221.000.00--1.00---------------
..........................................................................................................................................................................ACTATCTTTTTTTTTTTTTAATCGAAG.....................................................271.000.00---1.00--------------
...........................................................................................................................................................................CTATCTTTTTTTTTTTCTTG...........................................................201.000.00--1.00---------------
.............................................................................................................................................................................ATCTTTTTTTTTTTTTAATCCAGG.....................................................241.000.00-----1.00------------
............................................................................................................................................................................TATCTTTTTTTTTTTTTATCTA........................................................221.000.00-1.00----------------
.........................................................................................................................................................................AACTATCTTTTTTTTTCG...............................................................181.000.00-1.00----------------
.............................................................................................................................................................................ATCTTTTTTTTTTTTTAATCCG.......................................................221.000.00-1.00----------------
.........................................................................................................................................................................AACTATCTTTTTTTTTTCC..............................................................191.000.00----1.00-------------
..........................................................................................................................................................................ACTATCTTTTTTTTTTTCCTG...........................................................211.000.00--1.00---------------
.........................................................................................................................................................................AACTATCTTTTTTTTTTTTCTTG..........................................................231.000.00--1.00---------------
.......................................................................................................................................TTTTATTTGTTTTCC....................................................................................................1501.001.00--------1.00---------
..............................................................................................................................................................................TCTTTTTTTTTTTTTAATCTCCTG....................................................241.000.00--1.00---------------
...................................................................................................TTTAAATTTCATATCTTTT....................................................................................................................................191.000.00-----------1.00------
..........................................................................................................................................................................ACTATCTTTTTTTTTTTTATTT..........................................................221.000.001.00-----------------
..........................................................................................................................................................................ACTATCTTTTTTTTTCG...............................................................171.000.00---1.00--------------
..........................................................................................................................................................................ACTATCTTTTTTTTTTTTTCCTG.........................................................231.000.00--1.00---------------
............................................................................................................................................................................TATCTTTTTTTTTTTTTAATATTA......................................................241.000.00-1.00----------------
..............................................................................................................................................................................TCTTTTTTTTTTTTTAATCTGGGG....................................................241.000.00------------1.00-----
..........................................................................................................................................................................ACTATCTTTTTTTTTTTGGG............................................................201.000.00-----1.00------------
..........................................................................................................................................................................ACTATCTTTTTTTTTTTTCTC...........................................................211.000.00----1.00-------------
...............................................................................................................................................................................CTTTTTTTTTTTTTAATCCCCG.....................................................221.000.00-1.00----------------
............................................................................................................................................................................TATCTTTTTTTTTTTTTAATCTTTCA....................................................261.000.00---1.00--------------
..........................................................................................................................................................................ACTATCTTTTTTTTTTTTTCTTC.........................................................231.000.00----1.00-------------
..........................................................................................................................................................................ACTATCTTTTTTTTTTTTCCGG..........................................................221.000.00-1.00----------------
..........................................................................................................................................................................ACTATCTTTTTTTTTTTTTA............................................................2070.860.860.290.290.140.14--------------
..........................................................................................................................................................................ACTATCTTTTTTTTTTTTTATG..........................................................2270.570.860.14-0.140.29--------------
..........................................................................................................................................................................ACTATCTTTTTTTTTTTTTAGG..........................................................2270.140.86--0.14---------------
..........................................................................................................................................................................ACTATCTTTTTTTTTTTTTATTG.........................................................2370.140.860.14-----------------
..........................................................................................................................................................................ACTATCTTTTTTTTTTTTTAG...........................................................2170.140.86--0.14---------------
............................................................................................................................................................................TATCTTTTTTTTTTTTTAATCGCG......................................................2480.120.12-0.12----------------
............................................................................................................................................................................TATCTTTTTTTTTTTTTAATC.........................................................2180.120.12-----0.12------------

Antisense strand
ATAAGAATTCTGGGAGGACACAGACATTCAGTCTACAGGGGACAATATGGAAACAAATGGGCATGGCTCCATTCCAGTAACACTTTATATGCACTGCAATTTAAATTTCATATCGTTTTCATGTCATAAAATATTTTTTATTTGTTTTCCAAACGTTAAAAAACATAAAAACTATCTTTTTTTTTTTTTAATCTCATTAGCCATTCAAAAACAGATGAGATGGGGACAGATTTAACCCAAAGGACATAGT
..................................................................................................................(((((.((((..........((((((..((((.....)))).)))))))))).)))))..............................................................................
..............................................................................................95.......................................................................................................200................................................
SizePerfect hitTotal NormPerfect NormSRR189776(GSM714636)
cell line: HEK293clip variant: CLIPenzymatic . (cell line)		SRR189775(GSM714635)
cell line: HEK293clip variant: CLIPenzymatic . (cell line)		SRR189777(GSM714637)
cell line: HEK293clip variant: PAR-CLIPenzyma. (cell line)		SRR189778(GSM714638)
cell line: HEK293clip variant: PAR-CLIPenzyma. (cell line)		SRR189781(GSM714641)
cell line: HEK293clip variant: PAR-CLIPenzyma. (cell line)		SRR189780(GSM714640)
cell line: HEK293clip variant: PAR-CLIPenzyma. (cell line)		SRR191607(GSM715717)
192genomic small RNA (size selected RNA from . (breast)		SRR444058(SRX128906)
Sample 16cDNABarcode: AF-PP-335: ACG CTC TTC . (skin)		GSM956925PAZD5SRR189782SRR037937(GSM510475)
293cand2. (cell line)		SRR029128(GSM416757)
H520. (cell line)		SRR189779(GSM714639)
cell line: HEK293clip variant: PAR-CLIPenzyma. (cell line)		SRR330917(SRX091755)
tissue: normal skindisease state: normal. (skin)		TAX577744(Rovira)
total RNA. (breast)		SRR330915(SRX091753)
tissue: normal skindisease state: normal. (skin)		SRR060981(GSM569185)
Human centroblast [09-001]. (cell line)		SRR330894(SRX091732)
tissue: skin psoriatic uninvolveddisease stat. (skin)
..................................................................................................................................ATATTTTTTATTTGTTTTCGA................................................................................................... 212.000.00------2.00-----------
..............................................................................................CATGAAAACGATATGAAATTTAAATTGCA............................................................................................................................... 2911.001.00---------------1.00--
.......................................................................................................................................................................................................ATCTCATCTGTTTTTGAATGGC............................. 2211.001.00-------------1.00----
...................................................................................................................................TATTTTTTATTTGTTTTCCTAT................................................................................................. 221.000.00----------1.00-------
.......................................................................................................GAAAACGATATGAAATT.................................................................................................................................. 1711.001.00--------------1.00---
.....................................................................................................................................................................................................................................ATTTAACCCAAAGGACGA... 181.000.00---------1.00--------
.................................................................GCTCCATTCCAGTAACTGG...................................................................................................................................................................... 191.000.00-------1.00----------
..................................CATATTGTCCCCTGT......................................................................................................................................................................................................... 1570.140.14-----------------0.14