ID: uc002jge.2_intron_5_0_chr17_65882433_f.5p
GENE: (6)
chr17:65882383-65882632+


(1)
AGO2.ip
(1)
B-CELL
(1)
BRAIN
(15)
CELL-LINE
(1)
HEART
(1)
HELA
(1)
LIVER
(2)
OTHER
(4)
SKIN

Sense strand
AAATGGAGAAAGAGAATCTCATACACCTGTCTCTATTCAGGAAGAGATAGGTAAGAATATACTTCATCCATTCCTTTAAAGGGAAGTTTTTTCTTTTTTTTCTTTTTTTTGTGTGTGTGTGTGTGGTTTTTTGCTTTTGTTTTTGTTTTTTAGTTTTTAATTTTTTAAATGAAAGTTTGGTGGGGGGTGGAATTTAGATGTTCTTTTCCTTTATTTTTCATTTTTTTTTTAAACACAGCACTTGCACTCA

................................................................................................97.........................................................156............................................................................................
SizePerfect hitTotal NormPerfect NormSRR189780(GSM714640)
cell line: HEK293clip variant: PAR-CLIPenzyma. (cell line)
SRR189779(GSM714639)
cell line: HEK293clip variant: PAR-CLIPenzyma. (cell line)
DRR001489(DRX001043)
"Hela short nuclear cell fraction, control". (hela)
SRR189781(GSM714641)
cell line: HEK293clip variant: PAR-CLIPenzyma. (cell line)
SRR189778(GSM714638)
cell line: HEK293clip variant: PAR-CLIPenzyma. (cell line)
SRR189777(GSM714637)
cell line: HEK293clip variant: PAR-CLIPenzyma. (cell line)
SRR189776(GSM714636)
cell line: HEK293clip variant: CLIPenzymatic . (cell line)
SRR189775(GSM714635)
cell line: HEK293clip variant: CLIPenzymatic . (cell line)
SRR189784SRR037935(GSM510473)
293cand3. (cell line)
SRR189782SRR037937(GSM510475)
293cand2. (cell line)
SRR330872(SRX091710)
tissue: skin psoriatic involveddisease state:. (skin)
SRR207117(GSM721079)
Whole cell RNA. (cell line)
SRR330907(SRX091745)
tissue: normal skindisease state: normal. (skin)
GSM450601(GSM450601)
miRNA sequencing raw reads from post-mortem s. (brain)
SRR342901(SRX096797)
small RNA seq of Left atrial tissue. (heart)
SRR039635(GSM518472)
THP1_nuc_sRNAs. (cell line)
GSM956925Ago2(GSM956925)
"cell line: HEK293 cell linepassages: 15-20ip. (ago2 cell line)
SRR029131(GSM416760)
MCF7. (cell line)
GSM359203(GSM359203)
hepg2_untreated_b. (cell line)
SRR039623(GSM531986)
HCV(+) HCC Tissue Sample. (liver)
SRR444040(SRX128888)
Sample 1cDNABarcode: AF-PP-333: ACG CTC TTC C. (skin)
SRR033721(GSM497066)
Ly3 cell line (Ly3). (B cell)
SRR038863(GSM458546)
MM603. (cell line)
SRR330894(SRX091732)
tissue: skin psoriatic uninvolveddisease stat. (skin)
......................................................................................TTTTTTCTTTTTTTTCTTTTTTTAGGC.........................................................................................................................................2719.000.0017.002.00------------------------
.....................................................................................................CTTTTTTTTGTGTGTGGCG..................................................................................................................................1918.000.00--18.00-----------------------
.............................................................................................TTTTTTTTCTTTTTTTTGTTGGC......................................................................................................................................2310.000.003.007.00------------------------
.....................................................................................................CTTTTTTTTGTGTGTTGCG..................................................................................................................................199.000.00--9.00-----------------------
...........................................................................................TCTTTTTTTTCTTTTTTTTGGTT........................................................................................................................................237.000.005.002.00------------------------
...............................................................................................................................TTTTTGCTTTTGTTTTTGTTTTTTACTG...............................................................................................285.000.00-3.00-2.00----------------------
...........................................................................................................................TGGTTTTTTGCTTTTGTTTTTGTTTTTT...................................................................................................2815.005.002.003.00------------------------
.....................................................................................................CTTTTTTTTGTGTGTGGCC..................................................................................................................................195.000.00--5.00-----------------------
................................................................................................................................................................................................................CTTTATTTTTCATTTTTTTTTTAAACACAG............3014.004.00----2.002.00--------------------
.........................................AAGAGATAGGTAAGAATATACTTCATCCATC..................................................................................................................................................................................314.000.00---4.00----------------------
............................................................................................CTTTTTTTTCTTTTTTTTGGTT........................................................................................................................................223.000.003.00-------------------------
...........................................................................................................................TGGTTTTTTGCTTTTGTTTTTGTTTTTTTA.................................................................................................3013.005.001.002.00------------------------
.................................................................................................................................TTTGCTTTTGTTTTTGTTTTTTTATC...............................................................................................263.000.003.00-------------------------
..........................................................................................TTCTTTTTTTTCTTTTTTTTGGTT........................................................................................................................................243.000.002.001.00------------------------
..............................................................................................................................TTTTTTGCTTTTGTTTTTGTTTTTCTC.................................................................................................273.000.001.002.00------------------------
.......................................................................................TTTTTCTTTTTTTTCTTTTTTTTGGT.........................................................................................................................................263.000.00-3.00------------------------
..........................................................................................TTCTTTTTTTTCTTTTTTTTGGTG........................................................................................................................................243.000.002.001.00------------------------
.....................................................................................GTTTTTTCTTTTTTTTCTTTTTTTTCT..........................................................................................................................................273.000.00---3.00----------------------
...............................................................................................................................TTTTTGCTTTTGTTTTTGTTTTCTTG.................................................................................................263.000.003.00-------------------------
...........................................................................................TCTTTTTTTTCTTTTTTTTGCAG........................................................................................................................................233.000.002.001.00------------------------
.....................................................................................................CTTTTTTTTGTGTGTTCCG..................................................................................................................................193.000.00--3.00-----------------------
.....................................................................................................CTTTTTTTTGTGTGTTGCC..................................................................................................................................193.000.00--3.00-----------------------
.....................................................................................................CTTTTTTTTGTGTGTTTCG..................................................................................................................................193.000.00--3.00-----------------------
...........................................................................................................................TGGTTTTTTGCTTTTGTTTTTGTTTTGAGG.................................................................................................302.000.002.00-------------------------
......................................................................................TTTTTTCTTTTTTTTCTTTTTTTTGGTT........................................................................................................................................282.000.002.00-------------------------
....................................................................................AGTTTTTTCTTTTTTTTCTTTTTTTCTGC.........................................................................................................................................292.000.00-2.00------------------------
......................................................................................................................................................................................................TGTTCTTTTCCTTTATTTTTC...............................2112.002.00-2.00------------------------
......................................................................................TTTTTTCTTTTTTTTCTTTTTCGCC...........................................................................................................................................252.000.002.00-------------------------
..................................................................................................................................TTGCTTTTGTTTTTGTTTCTGG..................................................................................................222.000.002.00-------------------------
......................................................................................TTTTTTCTTTTTTTTCTTTTTTTTCTAG........................................................................................................................................282.000.00----2.00---------------------
...........................................................................................TCTTTTTTTTCTTTTTTTTGCTGG.......................................................................................................................................242.000.00-2.00------------------------
............................................................................................................................GGTTTTTTGCTTTTGTTTTTGTTTTTTTA.................................................................................................292.000.002.00-------------------------
................................................................................................................................TTTTGCTTTTGTTTTTGTTGGAG...................................................................................................232.000.00-2.00------------------------
.................................................................................................................................................................................................................TTTATTTTTCATTTTTTTAAG....................212.000.00----2.00---------------------
...................................................................................AAGTTTTTTCTTTTTTTTCTTTTTTTTGCGTG.......................................................................................................................................322.000.002.00-------------------------
................................................................................................................................................................................................................CTTTATTTTTCATTTTTTTCTAG...................232.000.00----1.001.00--------------------
...............................................................................................................................TTTTTGCTTTTGTTTTTGTTTTTTCCCC...............................................................................................282.000.002.00-------------------------
..............................................................................................................................TTTTTTGCTTTTGTTTTTGTTTTTCT..................................................................................................262.000.00-2.00------------------------
..............................................................................................................................TTTTTTGCTTTTGTTTTTGTTTTTTAGC................................................................................................282.000.00-2.00------------------------
.....................TACACCTGTCTCTATTCAG..................................................................................................................................................................................................................1912.002.00----------2.00---------------
.....................................................................................................CTTTTTTTTGTGTGTTTCC..................................................................................................................................192.000.00--2.00-----------------------
..............................................................................................................................TTTTTTGCTTTTGTTTTTGTTTTTTAGTTCT.............................................................................................312.000.002.00-------------------------
.......................................................................................TTTTTCTTTTTTTTCTTTTTTTTCCTG........................................................................................................................................272.000.00-2.00------------------------
................................................................................................................................TTTTGCTTTTGTTTTTGTTTCTGG..................................................................................................242.000.00-2.00------------------------
...............................................................................................................................TTTTTGCTTTTGTTTTTGTTTTTGGT.................................................................................................262.000.00-2.00------------------------
...........................................................................................................................TGGTTTTTTGCTTTTGTTTTTGTTTTTTTT.................................................................................................3012.005.002.00-------------------------
.AATGGAGAAAGAGAATCTC......................................................................................................................................................................................................................................1912.002.00---------2.00----------------
.........................................................................................................................TGTGGTTTTTTGCTTTTGTTTTGCTT.......................................................................................................262.000.001.001.00------------------------
.....................................................................................................CTTTTTTTTGTGTGTTTAG..................................................................................................................................192.000.00--2.00-----------------------
.................................................................................................................................TTTGCTTTTGTTTTTGTTTTTTTTTC...............................................................................................262.000.00-2.00------------------------
......................................................................................TTTTTTCTTTTTTTTCTTTTTTTAC...........................................................................................................................................252.000.001.001.00------------------------
...............................................................................................................................TTTTTGCTTTTGTTTTTGTTTTTCCC.................................................................................................262.000.001.001.00------------------------
.........................................................................................................................TGTGGTTTTTTGCTTTTGTTTTGCT........................................................................................................252.000.00-2.00------------------------
.....................................................................................................CTTTTTTTTGTGTGTGGAG..................................................................................................................................192.000.00--2.00-----------------------
.........................................................................................................................TGTGGTTTTTTGCTTTTGTTTTTGTTTTCT...................................................................................................302.000.00-2.00------------------------
................................................................................................................................TTTTGCTTTTGTTTTTGTTTTTTAGATG..............................................................................................282.000.001.00--1.00----------------------
...............................................................................................................................TTTTTGCTTTTGTTTTTGTTTTTTTTC................................................................................................272.000.002.00-------------------------
...............................................................................................................................TTTTTGCTTTTGTTTTTGTTTTTTTAAT...............................................................................................282.000.00-2.00------------------------
...................................................................................................TTCTTTTTTTTGTGTGTGTGTGCGTG.............................................................................................................................262.000.00-2.00------------------------
..............................................................................................TTTTTTTCTTTTTTTTGTGTGTGTGTGTG...............................................................................................................................2921.501.500.501.00------------------------
................................................................................................................................TTTTGCTTTTGTTTTTGTTTCTTG..................................................................................................241.000.001.00-------------------------
...............................................................................................................................TTTTTGCTTTTGTTTTTGTTTTTCTGA................................................................................................271.000.001.00-------------------------
..............................................................................................................................TTTTTTGCTTTTGTTTTTGTTTTGCGG.................................................................................................271.000.00-1.00------------------------
.....................................................................................................CTTTTTTTTGTGTGTGTGTGCGTG.............................................................................................................................241.000.001.00-------------------------
.......................................................................................................................................TTTGTTTTTGTTTTTTAGTTAGCC...........................................................................................241.000.00-1.00------------------------
...............................................................................................................................TTTTTGCTTTTGTTTTTGTTTCTGG..................................................................................................251.000.001.00-------------------------
..............................................................................................................................TTTTTTGCTTTTGTTTTTGTTTCTCC..................................................................................................261.000.001.00-------------------------
................................................................................................................................TTTTGCTTTTGTTTTTGTTTTTACC.................................................................................................251.000.001.00-------------------------
......................................................................................TTTTTTCTTTTTTTTCTTTTATTG............................................................................................................................................241.000.00------1.00-------------------
..............................................................................................................................TTTTTTGCTTTTGTTTTTGTTTTTTTA.................................................................................................271.000.001.00-------------------------
................................................................................................................................TTTTGCTTTTGTTTTTGTTTTTTTAGC...............................................................................................271.000.00-1.00------------------------
...........................................................................................................................................TTTTTGTTTTTTAGTTTTTAATTTTTTAAATG...............................................................................3211.001.00---1.00----------------------
.....................................................................................GTTTTTTCTTTTTTTTCTGGAG...............................................................................................................................................221.000.001.00-------------------------
......................................................................................TTTTTTCTTTTTTTTCTTTTTCGG............................................................................................................................................241.000.00-1.00------------------------
.......................................................................................TTTTTCTTTTTTTTCTTTTTTTTGACGG.......................................................................................................................................281.000.001.00-------------------------
...............................................................................................................................TTTTTGCTTTTGTTTTTGTTTCTGC..................................................................................................251.000.001.00-------------------------
......................................................................................TTTTTTCTTTTTTTTCTTTTTACTG...........................................................................................................................................251.000.00---1.00----------------------
...............................................................................................................................TTTTTGCTTTTGTTTTTGTTTTTTTTCC...............................................................................................281.000.00-1.00------------------------
..........................................................................................TTCTTTTTTTTCTTTTTTTTGTGTG.......................................................................................................................................2511.001.00-1.00------------------------
.............................................................................................................................GTTTTTTGCTTTTGTTTTTGGGT......................................................................................................231.000.001.00-------------------------
......................................................................................TTTTTTCTTTTTTTTCGGTC................................................................................................................................................201.000.001.00-------------------------
......................................................................................TTTTTTCTTTTTTTTCTTTTTCTAG...........................................................................................................................................251.000.00----1.00---------------------
......................................................................................TTTTTTCTTTTTTTTCTTTTTTTAGC..........................................................................................................................................261.000.001.00-------------------------
...............................................................................................................................TTTTTGCTTTTGTTTTTGTTTCGTT..................................................................................................251.000.00-1.00------------------------
......................................................................................TTTTTTCTTTTTTTTCTTTTCCAG............................................................................................................................................241.000.00----1.00---------------------
........................................................................................................................................TTGTTTTTGTTTTTTAGTTTTTAATTT.......................................................................................2711.001.001.00-------------------------
......................................................................................TTTTTTCTTTTTTTTCTTTTTTTTGTGCGTG.....................................................................................................................................311.000.001.00-------------------------
.........................................................................................................................TGTGGTTTTTTGCTTTTGTTTTTGTTTCTT...................................................................................................301.000.00-1.00------------------------
................................................................................................................................................................................................................CTTTATTTTTCATTTTTTTTTTCACA................261.000.00-------1.00------------------
.....................................................................................................CTTTTTTTTGTGTGTTACC..................................................................................................................................191.000.00--1.00-----------------------
.....................................................................................................CTTTTTTTTGTGTGTTGGG..................................................................................................................................191.000.00--1.00-----------------------
.....................................................................................GTTTTTTCTTTTTTTTCGAG.................................................................................................................................................201.000.00-1.00------------------------
...........................................................................................TCTTTTTTTTCTTTTTTTTGTTGGC......................................................................................................................................251.000.001.00-------------------------
..........................................................................................................................GTGGTTTTTTGCTTTTGTTTTTGTTTTTTT..................................................................................................301.000.001.00-------------------------
...............................................................................................................................TTTTTGCTTTTGTTTTTGTTTTTTAGTTCTT............................................................................................311.000.001.00-------------------------
...................................................................................................TTCTTTTTTTTGTGTGTGTGTGTGTGTGG..........................................................................................................................291.000.00-1.00------------------------
..............................................................................................................................TTTTTTGCTTTTGTTTTTGTTTTTTTACT...............................................................................................291.000.001.00-------------------------
......................................................................................TTTTTTCTTTTTTTTCTTTTTTTTATG.........................................................................................................................................271.000.00----1.00---------------------
..............................................................................................................................TTTTTTGCTTTTGTTTTTGTTAAG....................................................................................................241.000.00-1.00------------------------
...............................................................................................TTTTTTCTTTTTTTTGTGGTTG.....................................................................................................................................221.000.00-1.00------------------------
..........................................................................................................................GTGGTTTTTTGCTTTTGTTTTTGTTTTCT...................................................................................................291.000.001.00-------------------------
...............ATCTCATACACCTGTCTCTAC......................................................................................................................................................................................................................211.000.00--------1.00-----------------
...................................................................................AAGTTTTTTCTTTTTTTTCTTTTTGTC............................................................................................................................................271.000.001.00-------------------------
......................................................................................TTTTTTCTTTTTTTTCTTTTTTTTGTAGAG......................................................................................................................................301.000.001.00-------------------------
......................................................................................TTTTTTCTTTTTTTTCTTTTACC.............................................................................................................................................231.000.001.00-------------------------
....................................................................................AGTTTTTTCTTTTTTTTCTTTTCTT.............................................................................................................................................251.000.00-1.00------------------------
.....................................................................................................CTTTTTTTTGTGTGTGGGC..................................................................................................................................191.000.00--1.00-----------------------
...........................................................................................TCTTTTTTTTCTTTTTTTTGGGCC.......................................................................................................................................241.000.001.00-------------------------
......................................................................................TTTTTTCTTTTTTTTCTTTTTTTTGGT.........................................................................................................................................271.000.00-1.00------------------------
...........................................................................................................................TGGTTTTTTGCTTTTGTTTTTGTTTTTTTAAT...............................................................................................3211.005.001.00-------------------------
.................................................................ATCCATTCCTTTAAATTA.......................................................................................................................................................................181.000.00--------1.00-----------------
...........................................................................................TCTTTTTTTTCTTTTTTTTGTAGGG......................................................................................................................................251.000.00-1.00------------------------
.......................................................................................TTTTTCTTTTTTTTCTTTTTTTTCCAG........................................................................................................................................271.000.00------1.00-------------------
.................................................................................................................................TTTGCTTTTGTTTTTGTTTCTCG..................................................................................................231.000.00-1.00------------------------
........................................................................................TTTTCTTTTTTTTCTTTTTTTTGGTG........................................................................................................................................261.000.001.00-------------------------
.........................................................................................TTTCTTTTTTTTCTTTTTTTTACTG........................................................................................................................................251.000.00-----1.00--------------------
....................................................................................AGTTTTTTCTTTTTTTTCTTTTTTTGC...........................................................................................................................................271.000.001.00-------------------------
.................................................................................................................................................................................TGGTGGGGGGTGGAATTTAGATGTTCTTCCC..........................................311.000.00-1.00------------------------
.........................................................................................TTTCTTTTTTTTCTTTTTTTTGGTT........................................................................................................................................251.000.001.00-------------------------
.............................................................................................................................................................................AGTTTGGTGGGGGGTGGAATTTAGATGTT................................................2911.001.00-1.00------------------------
..............................................................................................................................TTTTTTGCTTTTGTTTTTGTTTTTTCG.................................................................................................271.000.00---1.00----------------------
...........................................................................................TCTTTTTTTTCTTTTTTTTGGACG.......................................................................................................................................241.000.00-1.00------------------------
.........................................................................................................................TGTGGTTTTTTGCTTTTGTTTTTGTTTTTTT..................................................................................................311.000.00-1.00------------------------
....................................................................................AGTTTTTTCTTTTTTTTCTTTTTTTG............................................................................................................................................261.000.001.00-------------------------
.......................................................................................TTTTTCTTTTTTTTCTTTTTTTTCAC.........................................................................................................................................261.000.00----1.00---------------------
.....................................................................................GTTTTTTCTTTTTTTTCTTTTCC..............................................................................................................................................231.000.001.00-------------------------
.................................................................................................................................TTTGCTTTTGTTTTTGTTTTTTCC.................................................................................................241.000.001.00-------------------------
....................................TCAGGAAGAGATAGGTAAGAATATACTTCACCC.....................................................................................................................................................................................331.000.00-1.00------------------------
...............................................................................................................................................................................................................CCTTTATTTTTCATTTTTAAAG.....................221.000.00------1.00-------------------
...............................................................................................................................TTTTTGCTTTTGTTTTTGTTTTTTTAGC...............................................................................................281.000.001.00-------------------------
..........................................................................................................................GTGGTTTTTTGCTTTTGTTTTGCC........................................................................................................241.000.001.00-------------------------
................................................................................................................................TTTTGCTTTTGTTTTTGTTTTTTTATG...............................................................................................271.000.00-1.00------------------------
........................................................................................TTTTCTTTTTTTTCTTTTTTTTGCAGT.......................................................................................................................................271.000.001.00-------------------------
......................................................................................TTTTTTCTTTTTTTTCTTTTTTTTGGTA........................................................................................................................................281.000.00-1.00------------------------
..............................................................................................................................TTTTTTGCTTTTGTTTTTGTTTCCA...................................................................................................251.000.001.00-------------------------
...........................................................................................................................TGGTTTTTTGCTTTTGTTTTTTTAG......................................................................................................251.000.00-1.00------------------------
.......................................................................................TTTTTCTTTTTTTTCTTTTAAAG............................................................................................................................................231.000.00----1.00---------------------
.....................................................................................................CTTTTTTTTGTGTGTTCAG..................................................................................................................................191.000.00--1.00-----------------------
.......................................................................................TTTTTCTTTTTTTTCTTTTACAG............................................................................................................................................231.000.00-----1.00--------------------
.........................................................................................TTTCTTTTTTTTCTTTTTTTTGTAGGG......................................................................................................................................271.000.001.00-------------------------
........................................................................................TTTTCTTTTTTTTCTTTTTTTTAGTT........................................................................................................................................261.000.001.00-------------------------
.......................................................................................TTTTTCTTTTTTTTCTTTTTTTTGGTT........................................................................................................................................271.000.00-1.00------------------------
.................................................................................................................................................................................................................TTTATTTTTCATTTTTTTATTC...................221.000.00----1.00---------------------
.....................................................................................................CTTTTTTTTGTGTGTCCCC..................................................................................................................................191.000.00--1.00-----------------------
.........................................................................................TTTCTTTTTTTTCTTTTTTTTAAGC........................................................................................................................................251.000.001.00-------------------------
............................................................................................CTTTTTTTTCTTTTTTTTATCT........................................................................................................................................221.000.00---1.00----------------------
..................................................................................................................................TTGCTTTTGTTTTTGTTTTTTAATG...............................................................................................251.000.001.00-------------------------
...............................................................................................................................TTTTTGCTTTTGTTTTTGTTTTTTTTTC...............................................................................................281.000.001.00-------------------------
....................................................................................................................................................................................TGGGGGGTGGAATTTAGATG..................................................2011.001.00--------------1.00-----------
.................................................................................................................................................................................TGGTGGGGGGTGGAATTTAGCTG..................................................231.000.00---1.00----------------------
.............................................................................................TTTTTTTTCTTTTTTTTGTCTTC......................................................................................................................................231.000.00-1.00------------------------
...............................................................................................................................TTTTTGCTTTTGTTTTTGTTTTTTAAG................................................................................................271.000.00---1.00----------------------
..............................................................................................................................TTTTTTGCTTTTGTTTTTGTTTTCC...................................................................................................251.000.00-1.00------------------------
...............................................................................................................................................................................................ATTTAGATGTTCTTTTTTTC.......................................201.000.00-1.00------------------------
.......................................................................................TTTTTCTTTTTTTTCTTTTTTTTCGGC........................................................................................................................................271.000.001.00-------------------------
.....................................................................................GTTTTTTCTTTTTTTTCTTTTATTC............................................................................................................................................251.000.00-----1.00--------------------
................................................................................................................................TTTTGCTTTTGTTTTTGTTTTTTACTG...............................................................................................271.000.001.00-------------------------
.......................................................................................TTTTTCTTTTTTTTCGGTT................................................................................................................................................191.000.001.00-------------------------
..............................................................................................................................TTTTTTGCTTTTGTTTTTGTTTTTAC..................................................................................................261.000.001.00-------------------------
..........................................................................................TTCTTTTTTTTCTTTTTTTTAATC........................................................................................................................................241.000.00-1.00------------------------
...........................................................................................................................TGGTTTTTTGCTTTTGTTTTTGTTCTT....................................................................................................271.000.001.00-------------------------
......................................................................................TTTTTTCTTTTTTTTCTTTTTTTTAACG........................................................................................................................................281.000.00-----1.00--------------------
..................................................................................................TTTCTTTTTTTTGTGTGTGTGTGTGGG.............................................................................................................................271.000.00-1.00------------------------
..............................................................................................................................TTTTTTGCTTTTGTTTTTGTTTTTTCC.................................................................................................271.000.001.00-------------------------
...................................................................................AAGTTTTTTCTTTTTTTTCTTAG................................................................................................................................................231.000.00---1.00----------------------
................................................................................................................................TTTTGCTTTTGTTTTTGTTTCTCC..................................................................................................241.000.001.00-------------------------
.................................................................................................................................TTTGCTTTTGTTTTTGTTTTTACC.................................................................................................241.000.00-1.00------------------------
.................................................................................................................................TTTGCTTTTGTTTTTGTTTTTTTAAC...............................................................................................261.000.001.00-------------------------
...................................................................................................................................TGCTTTTGTTTTTGTTTTTTAGTTTTC............................................................................................271.000.001.00-------------------------
..................................ATTCAGGAAGAGATAGGTAAGAA.................................................................................................................................................................................................2311.001.00---------------------1.00----
.....................................................................................................CTTTTTTTTGTGTGTGTGTGTGTGGG...........................................................................................................................261.000.00-1.00------------------------
...........................................................................................TCTTTTTTTTCTTTTTTTTGGCAC.......................................................................................................................................241.000.00-1.00------------------------
......................................................................................TTTTTTCTTTTTTTTCTTTTTTTGGTC.........................................................................................................................................271.000.001.00-------------------------
......................................................................................TTTTTTCTTTTTTTTCGGGC................................................................................................................................................201.000.00-1.00------------------------
.......................................................................................TTTTTCTTTTTTTTCTTTTTTTTCGG.........................................................................................................................................261.000.001.00-------------------------
........................................................................................TTTTCTTTTTTTTCTTTTTTTTATG.........................................................................................................................................251.000.00-------1.00------------------
..............................................................................................................................TTTTTTGCTTTTGTTTTTGTTTTCTT..................................................................................................261.000.001.00-------------------------
.......................................................................................................................................TTTGTTTTTGTTTTTTAGTTAGTC...........................................................................................241.000.00-1.00------------------------
............................................................................................CTTTTTTTTCTTTTTTTTGGTTC.......................................................................................................................................231.000.001.00-------------------------
..............................................................................................................................TTTTTTGCTTTTGTTTTTGTTTTCTTT.................................................................................................271.000.00-1.00------------------------
..............................................................................................................................TTTTTTGCTTTTGTTTTTGTTTCTTT..................................................................................................261.000.001.00-------------------------
.......................................................................................................................TGTGTGGTTTTTTGCTTTTG...............................................................................................................2011.001.001.00-------------------------
.......................................................................................TTTTTCTTTTTTTTCTTTTTTTTGGCC........................................................................................................................................271.000.00-1.00------------------------
..............................................................................................TTTTTTTCTTTTTTTTGTGTCTCT....................................................................................................................................241.000.00-1.00------------------------
..........................................................................................................................................................................................................CTTTTCCTTTATTTTTCATTTTTTTG......................261.000.00-----1.00--------------------
.....................................................................................GTTTTTTCTTTTTTTTCTTTTGGC.............................................................................................................................................241.000.001.00-------------------------
...............................................................................................................................TTTTTGCTTTTGTTTTTGTTTCTCC..................................................................................................251.000.001.00-------------------------
........................................................................................................................................................................................................TTCTTTTCCTTTATTTTTCATTTTTTTTTT....................3011.001.001.00-------------------------
...........................................................................................................................TGGTTTTTTGCTTTTGTTTTTGTTTTTTT..................................................................................................2911.005.00-1.00------------------------
...........................................................................................TCTTTTTTTTCTTTTTTTTGGT.........................................................................................................................................221.000.001.00-------------------------
.........................................................................................TTTCTTTTTTTTCTTTTTTTTGTAGC.......................................................................................................................................261.000.001.00-------------------------
..............................................................................................................................TTTTTTGCTTTTGTTTTTGTTTTTGTC.................................................................................................271.000.001.00-------------------------
..................................................................................................................................TTGCTTTTGTTTTTGTTCTGC...................................................................................................211.000.001.00-------------------------
...............................................................................................................................TTTTTGCTTTTGTTTTTGTTTTCTAG.................................................................................................261.000.00-1.00------------------------
.......................................................................................TTTTTCTTTTTTTTCTTTTTTTTGCAG........................................................................................................................................271.000.00---1.00----------------------
......................................................................................TTTTTTCTTTTTTTTCGACG................................................................................................................................................201.000.00-1.00------------------------
.............................................................................................................................GTTTTTTGCTTTTGTTTTTGTTTTTC...................................................................................................261.000.00-1.00------------------------
.................................................................................................................................................................................TGGTGGGGGGTGGAATTCTG.....................................................201.000.00------------1.00-------------
..............................................................................................................................TTTTTTGCTTTTGTTTTTGTTTTGC...................................................................................................251.000.001.00-------------------------
...........................................................................................TCTTTTTTTTCTTTTTTTTAGGG........................................................................................................................................231.000.001.00-------------------------
.........................................................................................................................TGTGGTTTTTTGCTTTTGTTTCGCT........................................................................................................251.000.001.00-------------------------
.........................................................................................................................TGTGGTTTTTTGCTTTTGTTGC...........................................................................................................221.000.00-1.00------------------------
..............................................................................................................................TTTTTTGCTTTTGTTTTTGTTTTTCTGA................................................................................................281.000.00-1.00------------------------
.........................................................................................................................TGTGGTTTTTTGCTTTTGTTTTGCC........................................................................................................251.000.001.00-------------------------
...................................................................................................................................................................................GTGGGGGGTGGAATTCG......................................................171.000.00---------------1.00----------
................................CTATTCAGGAAGAGATAG........................................................................................................................................................................................................1811.001.00--------------------1.00-----
.......................................................................................TTTTTCTTTTTTTTCTTTTGGTT............................................................................................................................................231.000.001.00-------------------------
.......................................................................................TTTTTCTTTTTTTTCTTTTTTTTCCAC........................................................................................................................................271.000.001.00-------------------------
.................................................................................................................................TTTGCTTTTGTTTTTGTTTTTTAATC...............................................................................................261.000.001.00-------------------------
.........................................................................................TTTCTTTTTTTTCTTTTTTTTGGTA........................................................................................................................................251.000.001.00-------------------------
...........................................................................................................................TGGTTTTTTGCTTTTGTTTTTTCC.......................................................................................................241.000.001.00-------------------------
......................................................................................TTTTTTCTTTTTTTTCTTTTTTTTGCCC........................................................................................................................................281.000.001.00-------------------------
....................................................................................AGTTTTTTCTTTTTTTTCTTTTTTTTCCCC........................................................................................................................................301.000.001.00-------------------------
..............................................................................................................................TTTTTTGCTTTTGTTTTTGTTTTTTAGTCT..............................................................................................301.000.001.00-------------------------
...........................................................................................TCTTTTTTTTCTTTTTTTTGGAGG.......................................................................................................................................241.000.001.00-------------------------
..........................................................................................TTCTTTTTTTTCTTTTTTTTATAG........................................................................................................................................241.000.00-------1.00------------------
.........................................................................................TTTCTTTTTTTTCTTTTTTTTGTGGT.......................................................................................................................................261.000.001.00-------------------------
.........................................................................................TTTCTTTTTTTTCTTTTTTTTATGT........................................................................................................................................251.000.001.00-------------------------
...........................................................................................................................TGGTTTTTTGCTTTTGTTCTTG.........................................................................................................221.000.001.00-------------------------
................................................................................................................................TTTTGCTTTTGTTTTTGTTTTTTCC.................................................................................................251.000.001.00-------------------------
........................................................................................................................................................................................................................TTCATTTTTTTTTTAAACACAG............2211.001.00-----1.00--------------------
..........................................................................................TTCTTTTTTTTCTTTTTTTTGGT.........................................................................................................................................231.000.001.00-------------------------
........................................................................................................................................................................................................TTCTTTTCCTTTATTTTTCATTTTTTTTTTTA..................3211.001.00----1.00---------------------
..........................................................................................TTCTTTTTTTTCTTTTTTTTGGCTG.......................................................................................................................................251.000.001.00-------------------------
.........................................................................................TTTCTTTTTTTTCTTTTTTTTATG.........................................................................................................................................241.000.00----1.00---------------------
...............................................................................................................................TTTTTGCTTTTGTTTTTGTTTTTTTGTC...............................................................................................281.000.001.00-------------------------
........................................................................................TTTTCTTTTTTTTCTTTTTTTTGCTTG.......................................................................................................................................271.000.00-1.00------------------------
.........................................................................................................................TGTGGTTTTTTGCTTTTGTTTTG..........................................................................................................231.000.00-1.00------------------------
.......................................................................................TTTTTCTTTTTTTTCTTTTTTTTATG.........................................................................................................................................261.000.001.00-------------------------
....................................................................................AGTTTTTTCTTTTTTTTCTTTTTTTTGTGCGTG.....................................................................................................................................331.000.001.00-------------------------
......................................................................................TTTTTTCTTTTTTTTCTTTTTTTTGGTC........................................................................................................................................281.000.001.00-------------------------
.........................................................................................................................TGTGGTTTTTTGCTTTTGTTTTTGTTTTT....................................................................................................2911.001.001.00-------------------------
...........................................................................................................................................................................................................TTTTCCTTTATTTTTCATTTTTTTTTTAAACACAG............3511.001.00-----1.00--------------------
................................................................................................................................TTTTGCTTTTGTTTTTGTTTTTTGAGG...............................................................................................271.000.00-1.00------------------------
...........................................................................................TCTTTTTTTTCTTTTTTTTGGTG........................................................................................................................................231.000.001.00-------------------------
.......................................................................................TTTTTCTTTTTTTTCTTTTTTTTCTGG........................................................................................................................................271.000.001.00-------------------------
...........................................................................................TCTTTTTTTTCTTTTTTTTGGGT........................................................................................................................................231.000.001.00-------------------------
................................................................................................................................................GTTTTTTAGTTTTTAATTTTTTAAATG...............................................................................2711.001.00---1.00----------------------
..........................................................................................TTCTTTTTTTTCTTTTTTTTGGGC........................................................................................................................................241.000.001.00-------------------------
......................................................................................TTTTTTCTTTTTTTTCTTTTTTTACAG.........................................................................................................................................271.000.00---1.00----------------------
..............................................................................................................................................................................................................TCCTTTATTTTTCATTTTTTG.......................211.000.00-----1.00--------------------
.................................................................................................................................................................................................................TTTATTTTTCATTTTTTTTTTAAACACAGCACT........3311.001.00----------------1.00---------
.......................................................AATATACTTCATCCATTAAAG..............................................................................................................................................................................211.000.00------1.00-------------------
...........................................................................................................................TGGTTTTTTGCTTTTGTTTTTGTTGCTG...................................................................................................281.000.001.00-------------------------
................................................................................................................................TTTTGCTTTTGTTTTTGTTTTTCTC.................................................................................................251.000.00-1.00------------------------
......................................................................................TTTTTTCTTTTTTTTCTTTTTTTACG..........................................................................................................................................261.000.00-1.00------------------------
......................................................................................TTTTTTCTTTTTTTTCTTTTTTTTGTTG........................................................................................................................................281.000.001.00-------------------------
.......................................................................................TTTTTCTTTTTTTTCTTTTTTTTGGTTT.......................................................................................................................................281.000.00---1.00----------------------
.................................................................................................................................TTTGCTTTTGTTTTTGTTTCC....................................................................................................211.000.00-1.00------------------------
..............................................................................................................................TTTTTTGCTTTTGTTTTTGTTTCGC...................................................................................................251.000.001.00-------------------------
......................................................................................................TTTTTTTTGTGTGTGTGTGTGGGG............................................................................................................................241.000.00-1.00------------------------
..........................................................................................TTCTTTTTTTTCTTTTTTTTACGG........................................................................................................................................241.000.00-1.00------------------------
.........................................................................................................................................................................................................TCTTTTCCTTTATTTTTCATTTTTTTCT.....................281.000.00----1.00---------------------
..............................................................................................................................TTTTTTGCTTTTGTTTTTGTTTTTCAGT................................................................................................281.000.00-1.00------------------------
......................................................................................TTTTTTCTTTTTTTTCTTTTTTTTGTGG........................................................................................................................................281.000.00-1.00------------------------
...............................................................................................................................................................................TTTGGTGGGGGGTGGAATTTAGATGTTCTC.............................................301.000.001.00-------------------------
.....................................................................................GTTTTTTCTTTTTTTTCAAGC................................................................................................................................................211.000.00---1.00----------------------
.....................................................................................................CTTTTTTTTGTGTGTCCCG..................................................................................................................................191.000.00--1.00-----------------------
..............................................................................................................................TTTTTTGCTTTTGTTTTTGTTTTTTTTC................................................................................................281.000.001.00-------------------------
...........................................................................................................TTTGTGTGTGTGTGTGTGGT...........................................................................................................................2001.001.00------------------1.00-------
.......................................................................................................................................................................................................................TTTCATTTTTTTTTTAAACACAG............2311.001.00-----1.00--------------------
...................................................................................................................................................................................................................TATTTTTCATTTTTTTTTTAAACACAG............2711.001.00-----1.00--------------------
................................................................................................................................TTTTGCTTTTGTTTTTGTTTTTTGCT................................................................................................261.000.001.00-------------------------
.........................................................................................................................TGTGGTTTTTTGCTTTTGTTTTTCGT.......................................................................................................261.000.00-1.00------------------------
.........................................................................................................................TGTGGTTTTTTGCTTTTGTTCGGC.........................................................................................................241.000.00-1.00------------------------
...........................................................................................TCTTTTTTTTCTTTTTTTTACG.........................................................................................................................................221.000.001.00-------------------------
......................................................................................TTTTTTCTTTTTTTTCTTTTCAAG............................................................................................................................................241.000.00----1.00---------------------
...............................................................................................................................TTTTTGCTTTTGTTTTTGTTTTTGGTA................................................................................................271.000.00-1.00------------------------
......................................................................................TTTTTTCTTTTTTTTCTTTTTTTTGGTG........................................................................................................................................281.000.001.00-------------------------
.........................................................................................................................TGTGGTTTTTTGCTTTTGTTTTGC.........................................................................................................241.000.00-1.00------------------------
............................................................................................................................................................................................................TTTCCTTTATTTTTCATTTTTC........................221.000.00----1.00---------------------
................................................................................................................................TTTTGCTTTTGTTTTTGTTTTTTACATT..............................................................................................281.000.001.00-------------------------
..................................................................................................TTTCTTTTTTTTGTGTGTGTGTGCG...............................................................................................................................251.000.00-1.00------------------------
.......................................................................................TTTTTCTTTTTTTTCTTTTTTTTGGACG.......................................................................................................................................281.000.00-1.00------------------------
........................................................................................................................................................................................................TTCTTTTCCTTTATTTTTTAA.............................211.000.00---1.00----------------------
................................................................................................................................TTTTGCTTTTGTTTTTGTTTCGG...................................................................................................231.000.001.00-------------------------
......................................................................................TTTTTTCTTTTTTTTCTTTTTTTAATC.........................................................................................................................................271.000.001.00-------------------------
.............................................................................................................................................TTTGTTTTTTAGTTTTTAATTTTTTAAATG...............................................................................3011.001.00---1.00----------------------
..............................................................................................................................TTTTTTGCTTTTGTTTTTGTTTTTTTC.................................................................................................271.000.00-1.00------------------------
........................................................................................TTTTCTTTTTTTTCTTTTTTTTGACGG.......................................................................................................................................271.000.001.00-------------------------
..........................................................................................TTCTTTTTTTTCTTTTTTTTACAG........................................................................................................................................241.000.00----1.00---------------------
...........................................................................................................................TGGTTTTTTGCTTTTGTTTTGCTT.......................................................................................................241.000.00-1.00------------------------
...........................................................................................................................TGGTTTTTTGCTTTTGTTTTTGTTTCT....................................................................................................2720.500.500.50-------------------------
...........................................................................................................................TGGTTTTTTGCTTTTGTTTTTGTTTTTC...................................................................................................2820.500.500.50-------------------------
...........................................................................................................................TGGTTTTTTGCTTTTGTTTTTGTTTTT....................................................................................................2720.500.50-0.50------------------------
..............................................................................................................................................................................................................TCCTTTATTTTTCATTTTTTT.......................2120.500.50---0.50----------------------
...........................................................................................................................TGGTTTTTTGCTTTTGTTTTTGTTT......................................................................................................2520.500.50-0.50------------------------
...........................................................................................................................TGGTTTTTTGCTTTTGTTTTTGTTTCTTT..................................................................................................2920.500.500.50-------------------------
.............................................................................................................................GTTTTTTGCTTTTGTTTTTGTTTTTTTAAT...............................................................................................3080.380.38---0.38----------------------
.............................................................................................................................GTTTTTTGCTTTTGTTTTTGTTTTTT...................................................................................................2680.380.380.38-------------------------
..................................................................................GAAGTTTTTTCTTTTTTTTCTTTTTT..............................................................................................................................................2630.330.33---0.33----------------------
......................................................................................................................................TTTTGTTTTTGTTTTTTAGTTTTT............................................................................................2440.250.250.25-------------------------
.....................................CAGGAAGAGATAGGT......................................................................................................................................................................................................1590.220.22-------------------------0.22
...................................................................................AAGTTTTTTCTTTTTTTTCTTTTTT..............................................................................................................................................2550.200.20---0.20----------------------
............................................................................................................................GGTTTTTTGCTTTTGTTTTTGTTTCAG...................................................................................................2760.170.170.17-------------------------
............................................................................................................................GGTTTTTTGCTTTTGTTTTTGTTT......................................................................................................2460.170.17-0.17------------------------
.............................................................................................................................GTTTTTTGCTTTTGTTTTTGTTTTTTTGTT...............................................................................................3080.120.38---0.12----------------------
....................................................................................AGTTTTTTCTTTTTTTTCTTTTTT..............................................................................................................................................2480.120.120.12-------------------------
....................................................................................AGTTTTTTCTTTTTTTTCTTTTTTGGAG..........................................................................................................................................2880.120.120.12-------------------------
....................................................................................AGTTTTTTCTTTTTTTTCTTTTTCC.............................................................................................................................................2590.110.11-0.11------------------------
................................................................................................TTTTTCTTTTTTTTGTGTGTGTG...................................................................................................................................2390.110.11-0.11------------------------
....................................................................................AGTTTTTTCTTTTTTTTCTTTTTGGC............................................................................................................................................2690.110.110.11-------------------------
....................................................................................AGTTTTTTCTTTTTTTTCTTTTT...............................................................................................................................................2390.110.110.11-------------------------

Antisense strand
AAATGGAGAAAGAGAATCTCATACACCTGTCTCTATTCAGGAAGAGATAGGTAAGAATATACTTCATCCATTCCTTTAAAGGGAAGTTTTTTCTTTTTTTTCTTTTTTTTGTGTGTGTGTGTGTGGTTTTTTGCTTTTGTTTTTGTTTTTTAGTTTTTAATTTTTTAAATGAAAGTTTGGTGGGGGGTGGAATTTAGATGTTCTTTTCCTTTATTTTTCATTTTTTTTTTAAACACAGCACTTGCACTCA

................................................................................................97.........................................................156............................................................................................
SizePerfect hitTotal NormPerfect NormSRR189780(GSM714640)
cell line: HEK293clip variant: PAR-CLIPenzyma. (cell line)
SRR189779(GSM714639)
cell line: HEK293clip variant: PAR-CLIPenzyma. (cell line)
DRR001489(DRX001043)
"Hela short nuclear cell fraction, control". (hela)
SRR189781(GSM714641)
cell line: HEK293clip variant: PAR-CLIPenzyma. (cell line)
SRR189778(GSM714638)
cell line: HEK293clip variant: PAR-CLIPenzyma. (cell line)
SRR189777(GSM714637)
cell line: HEK293clip variant: PAR-CLIPenzyma. (cell line)
SRR189776(GSM714636)
cell line: HEK293clip variant: CLIPenzymatic . (cell line)
SRR189775(GSM714635)
cell line: HEK293clip variant: CLIPenzymatic . (cell line)
SRR189784SRR037935(GSM510473)
293cand3. (cell line)
SRR189782SRR037937(GSM510475)
293cand2. (cell line)
SRR330872(SRX091710)
tissue: skin psoriatic involveddisease state:. (skin)
SRR207117(GSM721079)
Whole cell RNA. (cell line)
SRR330907(SRX091745)
tissue: normal skindisease state: normal. (skin)
GSM450601(GSM450601)
miRNA sequencing raw reads from post-mortem s. (brain)
SRR342901(SRX096797)
small RNA seq of Left atrial tissue. (heart)
SRR039635(GSM518472)
THP1_nuc_sRNAs. (cell line)
GSM956925Ago2(GSM956925)
"cell line: HEK293 cell linepassages: 15-20ip. (ago2 cell line)
SRR029131(GSM416760)
MCF7. (cell line)
GSM359203(GSM359203)
hepg2_untreated_b. (cell line)
SRR039623(GSM531986)
HCV(+) HCC Tissue Sample. (liver)
SRR444040(SRX128888)
Sample 1cDNABarcode: AF-PP-333: ACG CTC TTC C. (skin)
SRR033721(GSM497066)
Ly3 cell line (Ly3). (B cell)
SRR038863(GSM458546)
MM603. (cell line)
SRR330894(SRX091732)
tissue: skin psoriatic uninvolveddisease stat. (skin)
......................................................GAATATACTTCATCCATC.................................................................................................................................................................................. 181.000.00-------------------1.00------
......................................................................................TTTTTTCTTTTTTTTCTTTTTGGG............................................................................................................................................ 241.000.00-------------1.00------------
.........................................................AGGAATGGATGAAGTATA............................................................................................................................................................................... 1821.001.00-----------------------0.500.50-
...............................................................................................TTTTTTCTTTTTTTTGTCGAA...................................................................................................................................... 211.000.00----------------------1.00---
............................................................................................CTTTTTTTTCTTTTTTTTGGAAG....................................................................................................................................... 231.000.00-----------1.00--------------
.....................................................................................................................................................................................................ATGTTCTTTTCCTTTGAC................................... 181.000.00-----------------1.00--------
............................................................................................CTTTTTTTTCTTTTTTTTGCATT....................................................................................................................................... 231.000.00-----------1.00--------------