ID: uc002iwr.1_intron_13_0_chr17_56659092_r.5p
GENE: (19)
chr17:56661661-56661910-


(31)
BREAST 		(3)
CELL-LINE 		(3)
CERVIX 		(1)
HEART 		(1)
KIDNEY 		(2)
LIVER 		(2)
OTHER 		(7)
SKIN 		(4)
UTERUS

Sense strand
CCTTCCAAGCAAGTTCTGACACATTGGTGGCTGTAGAGAAATCTTACAGTGTAAGTAATACTGCCTGGAAAGCCAAGTTGAACCCAAAGATCTAATAAGATAGAACTGAGTTATTGTTATGTGTTATGACACCAAAATAATAGCTATAGTAGTTCTTTTTGGCTGGAGCATGTGCCTTCATGTCACTGACATGAATAAAATAATCTTTCCTCCTGTCTGATACTTTTTAAAAAGTCAGTTCAACTCAATG
..........................................................((((((((....(((((((..((((......((((....))))...((((((((((((((..((((....))))...)))))))))).)))).))))..))))))))).))).)))............................................................................
..................................................51..........................................................................................................................175.........................................................................
SizePerfect hitTotal NormPerfect NormTAX577744(Rovira)
total RNA. (breast)		TAX577743(Rovira)
total RNA. (breast)		SRR094131(GSM651907)
small RNA(18-35nt)small RNA deep sequencing o. (uterus)		SRR094132(GSM651908)
small RNA(18-35nt)small RNA deep sequencing o. (uterus)		SRR094129(GSM651905)
small RNA(18-35nt)small RNA deep sequencing o. (uterus)		SRR094130(GSM651906)
small RNA(18-35nt)small RNA deep sequencing o. (uterus)		SRR191633(GSM715743)
85genomic small RNA (size selected RNA from t. (breast)		SRR191588(GSM715698)
52genomic small RNA (size selected RNA from t. (breast)		SRR189782SRR039625(GSM531988)
HBV(-) HCV(-) HCC Tissue Sample. (liver)		SRR029129(GSM416758)
SW480. (cell line)		TAX577742(Rovira)
total RNA. (breast)		SRR191576(GSM715686)
86genomic small RNA (size selected RNA from t. (breast)		TAX577741(Rovira)
total RNA. (breast)		TAX577745(Rovira)
total RNA. (breast)		SRR189781(GSM714641)
cell line: HEK293clip variant: PAR-CLIPenzyma. (cell line)		SRR191409(GSM715519)
19genomic small RNA (size selected RNA from t. (breast)		SRR330867(SRX091705)
tissue: skin psoriatic involveddisease state:. (skin)		SRR330889(SRX091727)
tissue: skin psoriatic uninvolveddisease stat. (skin)		SRR191605(GSM715715)
76genomic small RNA (size selected RNA from t. (breast)		TAX577588(Rovira)
total RNA. (breast)		SRR040010(GSM532895)
G529N. (cervix)		SRR039620(GSM531983)
HBV(+) Adjacent Tissue Sample 2. (liver)		SRR191590(GSM715700)
48genomic small RNA (size selected RNA from t. (breast)		SRR553575(SRX182781)
source: Kidney. (Kidney)		GSM532883(GSM532883)
G871N. (cervix)		SRR040011(GSM532896)
G529T. (cervix)		SRR189783SRR191589(GSM715699)
69genomic small RNA (size selected RNA from t. (breast)		SRR191621(GSM715731)
16genomic small RNA (size selected RNA from t. (breast)		SRR191466(GSM715576)
114genomic small RNA (size selected RNA from . (breast)		SRR029128(GSM416757)
H520. (cell line)		SRR191570(GSM715680)
56genomic small RNA (size selected RNA from t. (breast)		SRR191403(GSM715513)
44genomic small RNA (size selected RNA from t. (breast)		TAX577739(Rovira)
total RNA. (breast)		SRR191523(GSM715633)
107genomic small RNA (size selected RNA from . (breast)		SRR191551(GSM715661)
32genomic small RNA (size selected RNA from t. (breast)		SRR191416(GSM715526)
34genomic small RNA (size selected RNA from t. (breast)		TAX577590(Rovira)
total RNA. (breast)		SRR191597(GSM715707)
75genomic small RNA (size selected RNA from t. (breast)		SRR330901(SRX091739)
tissue: skin psoriatic uninvolveddisease stat. (skin)		SRR330874(SRX091712)
tissue: skin psoriatic involveddisease state:. (skin)		SRR191624(GSM715734)
31genomic small RNA (size selected RNA from t. (breast)		SRR191415(GSM715525)
33genomic small RNA (size selected RNA from t. (breast)		SRR330858(SRX091696)
tissue: skin psoriatic involveddisease state:. (skin)		SRR191625(GSM715735)
32genomic small RNA (size selected RNA from t. (breast)		TAX577738(Rovira)
total RNA. (breast)		SRR191623(GSM715733)
18genomic small RNA (size selected RNA from t. (breast)		SRR342898(SRX096794)
small RNA seq of Right atrial tissue. (heart)		SRR191601(GSM715711)
58genomic small RNA (size selected RNA from t. (breast)		SRR191490(GSM715600)
15genomic small RNA (size selected RNA from t. (breast)		SRR330859(SRX091697)
tissue: skin psoriatic involveddisease state:. (skin)		SRR191622(GSM715732)
175genomic small RNA (size selected RNA from . (breast)		SRR330863(SRX091701)
tissue: skin psoriatic involveddisease state:. (skin)
.......................................................TAATACTGCCTGGAAATGAT...............................................................................................................................................................................2048.000.00-3.002.003.004.002.001.002.00-3.002.003.002.001.001.00-1.00--1.001.001.00-1.00-1.00--1.00-1.00--1.00-1.001.001.00-1.00--1.001.00--1.00-1.001.00-1.00--
.......................................................TAATACTGCCTGGAAATGA................................................................................................................................................................................1924.000.002.001.003.002.00-2.00-2.00--1.00--1.00----1.00---1.00-1.00-1.00--1.00-1.001.00-------1.00---1.00--1.00------
.......................................................TAATACTGCCTGGAAATGAA...............................................................................................................................................................................207.000.001.003.00----1.00---------------------------1.00----------1.00--------
.......................................................TAATACTGCCTGGAAATGG................................................................................................................................................................................192.000.001.00-1.00---------------------------------------------------
........................................................AATACTGCCTGGAAATGAT...............................................................................................................................................................................192.000.00----1.00-----------------------------------------------1.00-
.......................................................TAATACTGCCTGGAAATTAT...............................................................................................................................................................................201.000.001.00-----------------------------------------------------
.......................................................TAATACTGCCTGGAAATCAT...............................................................................................................................................................................201.000.00--------------------------------------1.00---------------
.............................................................................................................................................................TTTGGCTGGAGCATGTTTG..........................................................................191.000.00--------1.00---------------------------------------------
.............................................................................................................................................................TTTGGCTGGAGCATGTTTTC.........................................................................201.000.00--------1.00---------------------------------------------
.......................................................TAATACTGCCTGGAAAGGATA..............................................................................................................................................................................211.000.00--------------1.00---------------------------------------
........................................................AATACTGCCTGGAAATGA................................................................................................................................................................................181.000.00------1.00-----------------------------------------------
.......................................................TAATACTGCCTGGAAATTA................................................................................................................................................................................191.000.00------1.00-----------------------------------------------
......................................................................................................GAACTGAGTTATTGTTAAG.................................................................................................................................191.000.00-----------------------------------------1.00------------
.......................................................TAATACTGCCTGGAAACGA................................................................................................................................................................................191.000.00-1.00----------------------------------------------------
....................................................................................................................................................................................................AAAATAATCTTTCCTCCA....................................181.000.00---------------1.00--------------------------------------
.............................................................................................................................................................TTTGGCTGGAGCATGTATG..........................................................................191.000.00--------1.00---------------------------------------------
.......................................................TAATACTGCCTGGAATTGT................................................................................................................................................................................191.000.001.00-----------------------------------------------------
.......................................................TAATACTGCCTGGAAATGAC...............................................................................................................................................................................201.000.00-----------------1.00------------------------------------
.......................................................TAATACTGCCTGGAAAGGAGG..............................................................................................................................................................................211.000.001.00-----------------------------------------------------
.......................................................TAATACTGCCTGGAAAGAA................................................................................................................................................................................191.000.00--------------------------------------------------1.00---
.............................................................................................................................................................TTTGGCTGGAGCATGTTTT..........................................................................191.000.00--------1.00---------------------------------------------
.......................................................TAATACTGCCTGGAAATGAG...............................................................................................................................................................................201.000.001.00-----------------------------------------------------
.......................................................TAATACTGCCTGGAATGA.................................................................................................................................................................................181.000.00---1.00--------------------------------------------------
...........................................................................................................................................................TTTTTGGCTGGAGCAT...............................................................................1650.200.20-----------------------------------------------------0.20

Antisense strand
CCTTCCAAGCAAGTTCTGACACATTGGTGGCTGTAGAGAAATCTTACAGTGTAAGTAATACTGCCTGGAAAGCCAAGTTGAACCCAAAGATCTAATAAGATAGAACTGAGTTATTGTTATGTGTTATGACACCAAAATAATAGCTATAGTAGTTCTTTTTGGCTGGAGCATGTGCCTTCATGTCACTGACATGAATAAAATAATCTTTCCTCCTGTCTGATACTTTTTAAAAAGTCAGTTCAACTCAATG
..........................................................((((((((....(((((((..((((......((((....))))...((((((((((((((..((((....))))...)))))))))).)))).))))..))))))))).))).)))............................................................................
..................................................51..........................................................................................................................175.........................................................................
SizePerfect hitTotal NormPerfect NormTAX577744(Rovira)
total RNA. (breast)		TAX577743(Rovira)
total RNA. (breast)		SRR094131(GSM651907)
small RNA(18-35nt)small RNA deep sequencing o. (uterus)		SRR094132(GSM651908)
small RNA(18-35nt)small RNA deep sequencing o. (uterus)		SRR094129(GSM651905)
small RNA(18-35nt)small RNA deep sequencing o. (uterus)		SRR094130(GSM651906)
small RNA(18-35nt)small RNA deep sequencing o. (uterus)		SRR191633(GSM715743)
85genomic small RNA (size selected RNA from t. (breast)		SRR191588(GSM715698)
52genomic small RNA (size selected RNA from t. (breast)		SRR189782SRR039625(GSM531988)
HBV(-) HCV(-) HCC Tissue Sample. (liver)		SRR029129(GSM416758)
SW480. (cell line)		TAX577742(Rovira)
total RNA. (breast)		SRR191576(GSM715686)
86genomic small RNA (size selected RNA from t. (breast)		TAX577741(Rovira)
total RNA. (breast)		TAX577745(Rovira)
total RNA. (breast)		SRR189781(GSM714641)
cell line: HEK293clip variant: PAR-CLIPenzyma. (cell line)		SRR191409(GSM715519)
19genomic small RNA (size selected RNA from t. (breast)		SRR330867(SRX091705)
tissue: skin psoriatic involveddisease state:. (skin)		SRR330889(SRX091727)
tissue: skin psoriatic uninvolveddisease stat. (skin)		SRR191605(GSM715715)
76genomic small RNA (size selected RNA from t. (breast)		TAX577588(Rovira)
total RNA. (breast)		SRR040010(GSM532895)
G529N. (cervix)		SRR039620(GSM531983)
HBV(+) Adjacent Tissue Sample 2. (liver)		SRR191590(GSM715700)
48genomic small RNA (size selected RNA from t. (breast)		SRR553575(SRX182781)
source: Kidney. (Kidney)		GSM532883(GSM532883)
G871N. (cervix)		SRR040011(GSM532896)
G529T. (cervix)		SRR189783SRR191589(GSM715699)
69genomic small RNA (size selected RNA from t. (breast)		SRR191621(GSM715731)
16genomic small RNA (size selected RNA from t. (breast)		SRR191466(GSM715576)
114genomic small RNA (size selected RNA from . (breast)		SRR029128(GSM416757)
H520. (cell line)		SRR191570(GSM715680)
56genomic small RNA (size selected RNA from t. (breast)		SRR191403(GSM715513)
44genomic small RNA (size selected RNA from t. (breast)		TAX577739(Rovira)
total RNA. (breast)		SRR191523(GSM715633)
107genomic small RNA (size selected RNA from . (breast)		SRR191551(GSM715661)
32genomic small RNA (size selected RNA from t. (breast)		SRR191416(GSM715526)
34genomic small RNA (size selected RNA from t. (breast)		TAX577590(Rovira)
total RNA. (breast)		SRR191597(GSM715707)
75genomic small RNA (size selected RNA from t. (breast)		SRR330901(SRX091739)
tissue: skin psoriatic uninvolveddisease stat. (skin)		SRR330874(SRX091712)
tissue: skin psoriatic involveddisease state:. (skin)		SRR191624(GSM715734)
31genomic small RNA (size selected RNA from t. (breast)		SRR191415(GSM715525)
33genomic small RNA (size selected RNA from t. (breast)		SRR330858(SRX091696)
tissue: skin psoriatic involveddisease state:. (skin)		SRR191625(GSM715735)
32genomic small RNA (size selected RNA from t. (breast)		TAX577738(Rovira)
total RNA. (breast)		SRR191623(GSM715733)
18genomic small RNA (size selected RNA from t. (breast)		SRR342898(SRX096794)
small RNA seq of Right atrial tissue. (heart)		SRR191601(GSM715711)
58genomic small RNA (size selected RNA from t. (breast)		SRR191490(GSM715600)
15genomic small RNA (size selected RNA from t. (breast)		SRR330859(SRX091697)
tissue: skin psoriatic involveddisease state:. (skin)		SRR191622(GSM715732)
175genomic small RNA (size selected RNA from . (breast)		SRR330863(SRX091701)
tissue: skin psoriatic involveddisease state:. (skin)
.........................GGTGGCTGTAGAGAAGTTC.............................................................................................................................................................................................................. 191.000.00---------------------------1.00--------------------------
...............................................................CCTGGAAAGCCAAGTTT.......................................................................................................................................................................... 171.000.00---------------1.00--------------------------------------