ID: uc002iqo.2_intron_0_0_chr17_48423637_f.5p
GENE: (1)
chr17:48423587-48423836+


(1)
AGO1.ip
(1)
AGO2.ip
(6)
B-CELL
(2)
BRAIN
(14)
BREAST
(20)
CELL-LINE
(17)
CERVIX
(4)
HEART
(2)
HELA
(1)
KIDNEY
(4)
LIVER
(2)
OTHER
(1)
RRP40.ip
(27)
SKIN

Sense strand
GCCTGGTAGTGTGGAGCTTCAGCGGCCTGGAGGAGGACGAGGCGGGCGAGGTGCTCCGACGGCCGGGCGGGCGGGCAGGCCGGGCGCGGGGGCGCGCGGGGTCCTGGCGGGGCTGCGGGCGGCCCCAGCCGGGGAAGTGGGGCACGGGCCGCGTGCGTGCGTGCGGGGCGCCGGCGGTCGCCCAGAGCGGAGCATCCGGCCCCCGGCACTCCCTTCCCCAGCAGGCCTAGGGAGCTGCGCGCGGGGGCAG
..........................................................................(((.((..(((.((...((.(((....((((((((((((((....))))))).)))))))..)))..)).)).))))).)))..............................................................................................
.........................................................................74.................................................................................157...........................................................................................
SizePerfect hitTotal NormPerfect NormSRR444049(SRX128897)
Sample 9cDNABarcode: AF-PP-334: ACG CTC TTC C. (skin)
SRR040010(GSM532895)
G529N. (cervix)
GSM532880(GSM532880)
G659T. (cervix)
SRR037942(GSM510480)
293DroshaTN_cand5. (cell line)
SRR040028(GSM532913)
G026N. (cervix)
GSM532876(GSM532876)
G547T. (cervix)
TAX577741(Rovira)
total RNA. (breast)
SRR444057(SRX128905)
Sample 15cDNABarcode: AF-PP-334: ACG CTC TTC . (skin)
SRR326281(GSM769511)
"Dicer mRNA was knocked down using siDicer, c. (cell line)
TAX577743(Rovira)
total RNA. (breast)
SRR207110(GSM721072)
Nuclear RNA. (cell line)
SRR029054(GSM402329)
MCF7_smallRNAseq. (cell line)
SRR040020(GSM532905)
G699N_2. (cervix)
DRR001488(DRX001042)
"Hela short nuclear cell fraction, LNA(+)". (hela)
SRR326279(GSM769509)
cytoplasmic fraction was isolated using PARIS. (cell line)
SRR191630(GSM715740)
70genomic small RNA (size selected RNA from t. (breast)
DRR000558(DRX000316)
"THP-1 whole cell RNA, after 3 day treatment . (cell line)
SRR330917(SRX091755)
tissue: normal skindisease state: normal. (skin)
SRR330908(SRX091746)
tissue: normal skindisease state: normal. (skin)
TAX577738(Rovira)
total RNA. (breast)
SRR330905(SRX091743)
tissue: normal skindisease state: normal. (skin)
DRR000556(DRX000314)
"THP-1 whole cell RNA, after 3 day treatment . (cell line)
SRR040034(GSM532919)
G001N. (cervix)
SRR033712(GSM497057)
Burkitt Lymphoma (BL510). (B cell)
SRR330913(SRX091751)
tissue: normal skindisease state: normal. (skin)
SRR330922(SRX091760)
tissue: normal skindisease state: normal. (skin)
SRR207118(GSM721080)
RRP40 knockdown. (RRP40 cell line)
SRR330904(SRX091742)
tissue: normal skindisease state: normal. (skin)
SRR191594(GSM715704)
70genomic small RNA (size selected RNA from t. (breast)
SRR444052(SRX128900)
Sample 12cDNABarcode: AF-PP-340: ACG CTC TTC . (skin)
SRR015448(SRR015448)
cytoplasmic small RNAs. (breast)
SRR033713(GSM497058)
Burkitt Lymphoma (BL115). (B cell)
SRR033729(GSM497074)
splenic MZL (Splenic414). (B cell)
SRR330907(SRX091745)
tissue: normal skindisease state: normal. (skin)
TAX577744(Rovira)
total RNA. (breast)
RoviraIPAgo2(Rovira)
total RNA. (ago2 breast)
SRR444061(SRX128909)
Sample 19cDNABarcode: AF-PP-341: ACG CTC TTC . (skin)
SRR330921(SRX091759)
tissue: normal skindisease state: normal. (skin)
SRR039616(GSM531979)
HBV(+) Distal Tissue Sample 1. (liver)
GSM532889(GSM532889)
G576N. (cervix)
SRR060983(GSM569187)
Human pre-germinal center B cell [09-001]. (cell line)
SRR330883(SRX091721)
tissue: skin psoriatic uninvolveddisease stat. (skin)
SRR330900(SRX091738)
tissue: skin psoriatic uninvolveddisease stat. (skin)
TAX577588(Rovira)
total RNA. (breast)
SRR039620(GSM531983)
HBV(+) Adjacent Tissue Sample 2. (liver)
SRR553572(SRX182778)
source: Frontal Cortex. (Frontal Cortex)
SRR330906(SRX091744)
tissue: normal skindisease state: normal. (skin)
SRR553575(SRX182781)
source: Kidney. (Kidney)
SRR207111(GSM721073)
Whole cell RNA. (cell line)
SRR207113(GSM721075)
IP against AGO 1 & 2. (ago1/2 cell line)
SRR189783GSM532875(GSM532875)
G547N. (cervix)
SRR033717(GSM497062)
Mentle Cell Lymphoma (MCL112). (B cell)
SRR191636(GSM715746)
105genomic small RNA (size selected RNA from . (breast)
SRR191612(GSM715722)
65genomic small RNA (size selected RNA from t. (breast)
SRR189782TAX577740(Rovira)
total RNA. (breast)
GSM956925PazD5(GSM956925)
"cell line: HEK293 cell linepassages: 15-20ip. (cell line)
SRR330897(SRX091735)
tissue: skin psoriatic uninvolveddisease stat. (skin)
SRR189779(GSM714639)
cell line: HEK293clip variant: PAR-CLIPenzyma. (cell line)
SRR040039(GSM532924)
G531T. (cervix)
SRR040025(GSM532910)
G613T. (cervix)
GSM532884(GSM532884)
G871T. (cervix)
SRR040022(GSM532907)
G575N. (cervix)
SRR033732(GSM497077)
bjab cell line (bjab103). (B cell)
SRR189780(GSM714640)
cell line: HEK293clip variant: PAR-CLIPenzyma. (cell line)
TAX577590(Rovira)
total RNA. (breast)
SRR040014(GSM532899)
G623N. (cervix)
SRR330861(SRX091699)
tissue: skin psoriatic involveddisease state:. (skin)
SRR330901(SRX091739)
tissue: skin psoriatic uninvolveddisease stat. (skin)
SRR029126(GSM416755)
143B. (cell line)
SRR330874(SRX091712)
tissue: skin psoriatic involveddisease state:. (skin)
SRR040038(GSM532923)
G531N. (cervix)
DRR000559(DRX000317)
"THP-1 whole cell RNA, no treatment". (cell line)
DRR001489(DRX001043)
"Hela short nuclear cell fraction, control". (hela)
GSM450608(GSM450608)
miRNA sequencing raw reads from post-mortem s. (brain)
SRR038860(GSM458543)
MM426. (cell line)
SRR189786SRR040032(GSM532917)
G603N. (cervix)
SRR330894(SRX091732)
tissue: skin psoriatic uninvolveddisease stat. (skin)
SRR330902(SRX091740)
tissue: skin psoriatic uninvolveddisease stat. (skin)
GSM450602(GSM450602)
miRNA sequencing raw reads from post-mortem s. (brain)
TAX577589(Rovira)
total RNA. (breast)
SRR039622(GSM531985)
HCV(+) Adjacent Tissue Sample. (liver)
SRR326282(GSM769512)
"Dicer mRNA was knocked down using siDicer, t. (cell line)
SRR033728(GSM497073)
MALT (MALT413). (B cell)
SRR038853(GSM458536)
MELB. (cell line)
SRR342898(SRX096794)
small RNA seq of Right atrial tissue. (heart)
SRR040035(GSM532920)
G001T. (cervix)
SRR342896(SRX096792)
small RNA seq of Right atrial tissue. (heart)
SRR189778(GSM714638)
cell line: HEK293clip variant: PAR-CLIPenzyma. (cell line)
SRR330895(SRX091733)
tissue: skin psoriatic uninvolveddisease stat. (skin)
SRR039624(GSM531987)
HBV(-) HCV(-) Adjacent Tissue Sample. (liver)
SRR040015(GSM532900)
G623T. (cervix)
SRR330887(SRX091725)
tissue: skin psoriatic uninvolveddisease stat. (skin)
SRR330884(SRX091722)
tissue: skin psoriatic uninvolveddisease stat. (skin)
SRR330915(SRX091753)
tissue: normal skindisease state: normal. (skin)
SRR342900(SRX096796)
small RNA seq of Right atrial tissue. (heart)
SRR553573(SRX182779)
source: Cerebellum. (Cerebellum)
SRR330899(SRX091737)
tissue: skin psoriatic uninvolveddisease stat. (skin)
SRR330893(SRX091731)
tissue: skin psoriatic uninvolveddisease stat. (skin)
SRR553574(SRX182780)
source: Heart. (Heart)
..............................................................................GCCGGGCGCGGGGGCGCGTGC.......................................................................................................................................................211109.0024.0069.008.005.00-4.002.00-5.00-1.00--4.002.00------1.00-1.00--1.00---1.00------1.001.00----------1.00--1.00--------1.00-----------------------------------------
..............................................................................GCCGGGCGCGGGGGCGCG..........................................................................................................................................................18124.0024.00---1.00-----2.003.004.00---1.00-2.00-1.00---2.00---1.001.00-1.00--------1.00------1.00--1.00--------------------1.00-------------1.00-----------------
..............................................................................GCCGGGCGCGGGGGCGCGGGC.......................................................................................................................................................21110.0024.003.002.001.00-1.00------------------------1.00-----1.00------------------------------------------1.00-----------------------
..............................................................................GCCGGGCGCGGGGGCGCGCGC.......................................................................................................................................................217.000.001.00-1.00-2.002.00----------------1.00-------------------------------------------------------------------------------
...................................................................................................................................GGGAAGTGGGGCACGGGCCGCA.................................................................................................226.000.00---6.00--------------------------------------------------------------------------------------------------
..............................................................................GCCGGGCGCGGGGGCGCGT.........................................................................................................................................................1915.0024.00---------1.00------1.00----1.00---1.00-----1.00----------------------------------------------------------------------
..............................................................................GCCGGGCGCGGGGGCGCGTGCC......................................................................................................................................................2214.0024.00-------------------1.00----1.00-----------------------------1.00-------------------------------1.00---------------
..............................................................................GCCGGGCGCGGGGGCGC...........................................................................................................................................................1744.004.00---------0.500.25--0.25-1.50----0.25------------0.25--------------------------------------------------------------0.50-0.25-0.25-
.....................................................................................................................................................................GGGCGCCGGCGGTCGGC....................................................................1713.001.00------1.00----------------------------------1.00--------------------------------------1.00---------------------
..............................................................................GCCGGGCGCGGGGGCGCGTG........................................................................................................................................................2013.0024.001.00---------------2.00-------------------------------------------------------------------------------------
.....................................................................................................................................................................GGGCGCCGGCGGTCGG.....................................................................1612.001.00--------------------------------------------------------------------1.00----------1.00----------------------
.........TGTGGAGCTTCAGCGGCCTGGAGGAGGACG...................................................................................................................................................................................................................3012.002.00-------------1.00---------------------------------------------1.00------------------------------------------
.............................................................................GGCCGGGCGCGGGGGCGCGTGC.......................................................................................................................................................222.000.00-1.00--------------------------------------------------------------------------------------1.00-------------
...............................................................................CCGGGCGCGGGGGCGCGTG........................................................................................................................................................1922.000.50----------------------------------1.00------------------1.00------------------------------------------------
..............................................................................GCCGGGCGCGGGGGCGCGTGT.......................................................................................................................................................2112.0024.002.00-----------------------------------------------------------------------------------------------------
...................................................................................GCGCGGGGGCGCGCGGGC.....................................................................................................................................................181.000.00------1.00-----------------------------------------------------------------------------------------------
.............................................................................GGCCGGGCGCGGGGGTGT...........................................................................................................................................................181.000.00-------------------------------------------------------------------1.00----------------------------------
..............................................................CCGGGCGGGCGGGCAATT..........................................................................................................................................................................181.000.00--------------------------------------1.00---------------------------------------------------------------
..CTGGTAGTGTGGAGCTTCAGCGGCC...............................................................................................................................................................................................................................2511.001.00---------------------------------------------------------------------------------------1.00--------------
...........................................................................................................................................................................................................CGGCACTCCCTTCCCCGGT............................191.000.00-----------------------------------------------------------------------------1.00------------------------
....................................................GCTCCGACGGCCGGGGGG....................................................................................................................................................................................181.000.00------------------------------------------------------------------1.00-----------------------------------
...................................................................................................GGTCCTGGCGGGGCTTT......................................................................................................................................171.000.00------1.00-----------------------------------------------------------------------------------------------
....................................................................................CGCGGGGGCGCGCGGAT.....................................................................................................................................................171.000.00--------------------------------------------------------------1.00---------------------------------------
.................................................................................GGGCGCGGGGGCGCGCAG.......................................................................................................................................................181.000.00-----1.00------------------------------------------------------------------------------------------------
........................................................................................................................................................................................................................CCCAGCAGGCCTAGGGAGCTG.............2111.001.00----------------------------------------1.00-------------------------------------------------------------
..............................................................................GCCGGGCGCGGGGGCGCGGGA.......................................................................................................................................................2111.0024.00------1.00-----------------------------------------------------------------------------------------------
...................................................................................................GGTCCTGGCGGGGCTTTT.....................................................................................................................................181.000.00----------1.00-------------------------------------------------------------------------------------------
......................CGGCCTGGAGGAGGACGAGGCGGGCGAG........................................................................................................................................................................................................2811.001.00---------------------1.00--------------------------------------------------------------------------------
....................................................GCTCCGACGGCCGGGAAGG...................................................................................................................................................................................191.000.00---------------------------1.00--------------------------------------------------------------------------
.....................................................................................................................................................................GGGCGCCGGCGGTCG......................................................................1511.001.00----------------------------------------------------------1.00-------------------------------------------
..............................................................................GCCGGGCGCGGGGGCGCGGGCC......................................................................................................................................................2211.0024.00----------------------------1.00-------------------------------------------------------------------------
....................................................................................CGCGGGGGCGCGCGGGTG....................................................................................................................................................181.000.00-------------------------------------------1.00----------------------------------------------------------
................................................................................CGGGCGCGGGGGCGCGCCGGC.....................................................................................................................................................211.000.00-----------------1.00------------------------------------------------------------------------------------
.....GTAGTGTGGAGCTTCAGCGG.................................................................................................................................................................................................................................2011.001.00-----------------------------------------------------------------------------------1.00------------------
..........................................................................................................................CCCCAGCCGGGGAAGTG...............................................................................................................1711.001.00-----------------------------------------------------------------------1.00------------------------------
..........GTGGAGCTTCAGCGGCCTGGAGGAGCAC....................................................................................................................................................................................................................281.000.00------------------1.00-----------------------------------------------------------------------------------
...................................................................................................................................................................CGGGGCGCCGGCGGTTTGG....................................................................191.000.00-------------------------------------------------------1.00----------------------------------------------
......................CGGCCTGGAGGAGGACGA..................................................................................................................................................................................................................1811.001.00----------------------------------------------------------------1.00-------------------------------------
..................................................................................................................GCGGGCGGCCCCAGCCTT......................................................................................................................181.000.00----------------------------------------------------1.00-------------------------------------------------
..............................................................................GCCGGGCGCGGGGGCGCGA.........................................................................................................................................................1911.0024.00--------1.00---------------------------------------------------------------------------------------------
............GGAGCTTCAGCGGCCTGGAGGAGGACGAGGCGGG............................................................................................................................................................................................................3411.001.00---------------------------------------------1.00--------------------------------------------------------
.......................................................................................................................CGGCCCCAGCCGGGGGGC.................................................................................................................181.000.00------1.00-----------------------------------------------------------------------------------------------
..............................................................................GCCGGGCGCGGGGGCGCGTTC.......................................................................................................................................................2111.0024.00-1.00----------------------------------------------------------------------------------------------------
.....................................................................................................................................................................GGGCGCCGGCGGTCGGTGG..................................................................1911.001.00------------------------1.00-----------------------------------------------------------------------------
............................................................................AGGCCGGGCGCGGGGGCGCACG........................................................................................................................................................221.000.00-----------------------------------------------------------------1.00------------------------------------
..............................................................................GCCGGGCGCGGGGGCGCGTGG.......................................................................................................................................................2111.0024.00------------------------------------------------------------------------1.00-----------------------------
...............................................................................CCGGGCGCGGGGGCGCGCGCCCG....................................................................................................................................................231.000.00------------------------------------------------------------------------------------------1.00-----------
..............................................................................GCCGGGCGCGGGGGCGCGCGT.......................................................................................................................................................211.000.00--1.00---------------------------------------------------------------------------------------------------
......................................................................................................................GCGGCCCCAGCCGGGGGGA.................................................................................................................191.000.00--------1.00---------------------------------------------------------------------------------------------
..........................................................ACGGCCGGGCGGGCGGGC..............................................................................................................................................................................1811.001.00-----------------------------------------------1.00------------------------------------------------------
.......................................................................................................................................................CGTGCGTGCGTGCGGGGGGC...............................................................................201.000.00---------------------------------------------------------1.00--------------------------------------------
..............................................................................GCCGGGCGCGGGGGCGCGGGT.......................................................................................................................................................2111.0024.00---------------------------------------------------------------------------------------------1.00--------
......................CGGCCTGGAGGAGGACACCT................................................................................................................................................................................................................201.000.00--------------------------------------------------------------------------------------------1.00---------
...............................................................CGGGCGGGCGGGCAG............................................................................................................................................................................1501.001.00-------------------------------------------------------------------------1.00----------------------------
..............................................................................................................................................................................................................................AGGCCTAGGGAGCTGCGC..........1811.001.00-------------------------------------------------------------------------------------1.00----------------
...................................................................................................................CGGGCGGCCCCAGCCTCT.....................................................................................................................181.000.00----------------------------------------------------------------------------1.00-------------------------
..............................................................................GCCGGGCGCGGGGGCGCGTGA.......................................................................................................................................................2111.0024.00--1.00---------------------------------------------------------------------------------------------------
..............................................................................................CGCGGGGTCCTGGCGG............................................................................................................................................1621.001.00--------------------0.50--------------------------------------------------------------------------0.50------
..............................................................................................................................................................................CGGTCGCCCAGAGCGGAGCAT.......................................................2111.001.00------------------------------1.00-----------------------------------------------------------------------
................................GAGGACGAGGCGGGCGAG........................................................................................................................................................................................................1811.001.00-------------------------------1.00----------------------------------------------------------------------
....................................................................................CGCGGGGGCGCGCGGGTGCT..................................................................................................................................................201.000.00---------------------------------------------------------------1.00--------------------------------------
...................CAGCGGCCTGGAGGAGGAC....................................................................................................................................................................................................................1911.001.00-----------------------------------------------------------------------------------------1.00------------
...................................GACGAGGCGGGCGAGTGGT....................................................................................................................................................................................................191.000.00--------------------------------------------1.00---------------------------------------------------------
....GGTAGTGTGGAGCTTCAGCGGCCTGG............................................................................................................................................................................................................................2611.001.00--------------------------1.00---------------------------------------------------------------------------
...............................................................CGGGCGGGCGGGCAGGAGA........................................................................................................................................................................191.000.00-1.00----------------------------------------------------------------------------------------------------
.....................................................................................................................................................................GGGCGCCGGCGGTCGGT....................................................................1711.001.00-------------------------------------------------------------------------------------------1.00----------
...............................................................................CCGGGCGCGGGGGCGCGA.........................................................................................................................................................1821.000.50--------------1.00---------------------------------------------------------------------------------------
..................................................................................................GGGTCCTGGCGGGGCGG.......................................................................................................................................171.000.00--------------1.00---------------------------------------------------------------------------------------
.......................................................................................................................................................CGTGCGTGCGTGCGGGGG.................................................................................181.000.00--------------------------1.00---------------------------------------------------------------------------
........................................................................................................................................................................................GAGCGGAGCATCCGGCT.................................................171.000.00--------------------------------------------------------1.00---------------------------------------------
.....................................................................................................................................................................GGGCGCCGGCGGTCGGCGG..................................................................1911.001.00------------------1.00-----------------------------------------------------------------------------------
..............................................................................................CGCGGGGTCCTGGCGGCGG.........................................................................................................................................1920.501.00----------------------------------------------------------------------------------------------0.50-------
..............................................................................................CGCGGGGTCCTGGCGGCGGG........................................................................................................................................2020.501.00-------------------0.50----------------------------------------------------------------------------------
..............................................................................................CGCGGGGTCCTGGCGGC...........................................................................................................................................1720.501.00------------------0.50-----------------------------------------------------------------------------------
...............................................................................CCGGGCGCGGGGGCGCG..........................................................................................................................................................1720.500.50---------------0.50--------------------------------------------------------------------------------------
............................................................................................................................................................GTGCGTGCGGGGCGC...............................................................................1530.330.33--------------------0.33---------------------------------------------------------------------------------
........................................................................................................................................................GTGCGTGCGTGCGGG...................................................................................1560.330.33-------------------------------------------------------------------------------------------------0.33----
..........................................................................................................................................................................................................................CAGCAGGCCTAGGGAGC...............1740.250.25----------------------------------0.25-------------------------------------------------------------------
..............................................................................GCCGGGCGCGGGGGCGCTGGC.......................................................................................................................................................2140.254.00----0.25-------------------------------------------------------------------------------------------------
..........................CTGGAGGAGGACGAGGC...............................................................................................................................................................................................................1740.250.25--------------------0.25---------------------------------------------------------------------------------
.................................................................................................................................................................TGCGGGGCGCCGGCG..........................................................................1540.250.25---------------------------------------------------------------------------------------------------0.25--
..............................................................CCGGGCGGGCGGGCAGGC..........................................................................................................................................................................1840.250.25-------------0.25----------------------------------------------------------------------------------------
.......................................................................................................................................................CGTGCGTGCGTGCGG....................................................................................1550.200.20---------------------0.20--------------------------------------------------------------------------------
...........................TGGAGGAGGACGAGGC...............................................................................................................................................................................................................1660.170.17--------0.17---------------------------------------------------------------------------------------------
.................................................................................GGGCGCGGGGGCGCGCG........................................................................................................................................................1770.140.14-----------------------------------------------------------------------------------------------------0.14
.......................................................................................................CTGGCGGGGCTGCGG....................................................................................................................................1570.140.14----------------------------------------------------------------------------------------------0.14-------

Antisense strand
GCCTGGTAGTGTGGAGCTTCAGCGGCCTGGAGGAGGACGAGGCGGGCGAGGTGCTCCGACGGCCGGGCGGGCGGGCAGGCCGGGCGCGGGGGCGCGCGGGGTCCTGGCGGGGCTGCGGGCGGCCCCAGCCGGGGAAGTGGGGCACGGGCCGCGTGCGTGCGTGCGGGGCGCCGGCGGTCGCCCAGAGCGGAGCATCCGGCCCCCGGCACTCCCTTCCCCAGCAGGCCTAGGGAGCTGCGCGCGGGGGCAG
..........................................................................(((.((..(((.((...((.(((....((((((((((((((....))))))).)))))))..)))..)).)).))))).)))..............................................................................................
.........................................................................74.................................................................................157...........................................................................................
SizePerfect hitTotal NormPerfect NormSRR444049(SRX128897)
Sample 9cDNABarcode: AF-PP-334: ACG CTC TTC C. (skin)
SRR040010(GSM532895)
G529N. (cervix)
GSM532880(GSM532880)
G659T. (cervix)
SRR037942(GSM510480)
293DroshaTN_cand5. (cell line)
SRR040028(GSM532913)
G026N. (cervix)
GSM532876(GSM532876)
G547T. (cervix)
TAX577741(Rovira)
total RNA. (breast)
SRR444057(SRX128905)
Sample 15cDNABarcode: AF-PP-334: ACG CTC TTC . (skin)
SRR326281(GSM769511)
"Dicer mRNA was knocked down using siDicer, c. (cell line)
TAX577743(Rovira)
total RNA. (breast)
SRR207110(GSM721072)
Nuclear RNA. (cell line)
SRR029054(GSM402329)
MCF7_smallRNAseq. (cell line)
SRR040020(GSM532905)
G699N_2. (cervix)
DRR001488(DRX001042)
"Hela short nuclear cell fraction, LNA(+)". (hela)
SRR326279(GSM769509)
cytoplasmic fraction was isolated using PARIS. (cell line)
SRR191630(GSM715740)
70genomic small RNA (size selected RNA from t. (breast)
DRR000558(DRX000316)
"THP-1 whole cell RNA, after 3 day treatment . (cell line)
SRR330917(SRX091755)
tissue: normal skindisease state: normal. (skin)
SRR330908(SRX091746)
tissue: normal skindisease state: normal. (skin)
TAX577738(Rovira)
total RNA. (breast)
SRR330905(SRX091743)
tissue: normal skindisease state: normal. (skin)
DRR000556(DRX000314)
"THP-1 whole cell RNA, after 3 day treatment . (cell line)
SRR040034(GSM532919)
G001N. (cervix)
SRR033712(GSM497057)
Burkitt Lymphoma (BL510). (B cell)
SRR330913(SRX091751)
tissue: normal skindisease state: normal. (skin)
SRR330922(SRX091760)
tissue: normal skindisease state: normal. (skin)
SRR207118(GSM721080)
RRP40 knockdown. (RRP40 cell line)
SRR330904(SRX091742)
tissue: normal skindisease state: normal. (skin)
SRR191594(GSM715704)
70genomic small RNA (size selected RNA from t. (breast)
SRR444052(SRX128900)
Sample 12cDNABarcode: AF-PP-340: ACG CTC TTC . (skin)
SRR015448(SRR015448)
cytoplasmic small RNAs. (breast)
SRR033713(GSM497058)
Burkitt Lymphoma (BL115). (B cell)
SRR033729(GSM497074)
splenic MZL (Splenic414). (B cell)
SRR330907(SRX091745)
tissue: normal skindisease state: normal. (skin)
TAX577744(Rovira)
total RNA. (breast)
RoviraIPAgo2(Rovira)
total RNA. (ago2 breast)
SRR444061(SRX128909)
Sample 19cDNABarcode: AF-PP-341: ACG CTC TTC . (skin)
SRR330921(SRX091759)
tissue: normal skindisease state: normal. (skin)
SRR039616(GSM531979)
HBV(+) Distal Tissue Sample 1. (liver)
GSM532889(GSM532889)
G576N. (cervix)
SRR060983(GSM569187)
Human pre-germinal center B cell [09-001]. (cell line)
SRR330883(SRX091721)
tissue: skin psoriatic uninvolveddisease stat. (skin)
SRR330900(SRX091738)
tissue: skin psoriatic uninvolveddisease stat. (skin)
TAX577588(Rovira)
total RNA. (breast)
SRR039620(GSM531983)
HBV(+) Adjacent Tissue Sample 2. (liver)
SRR553572(SRX182778)
source: Frontal Cortex. (Frontal Cortex)
SRR330906(SRX091744)
tissue: normal skindisease state: normal. (skin)
SRR553575(SRX182781)
source: Kidney. (Kidney)
SRR207111(GSM721073)
Whole cell RNA. (cell line)
SRR207113(GSM721075)
IP against AGO 1 & 2. (ago1/2 cell line)
SRR189783GSM532875(GSM532875)
G547N. (cervix)
SRR033717(GSM497062)
Mentle Cell Lymphoma (MCL112). (B cell)
SRR191636(GSM715746)
105genomic small RNA (size selected RNA from . (breast)
SRR191612(GSM715722)
65genomic small RNA (size selected RNA from t. (breast)
SRR189782TAX577740(Rovira)
total RNA. (breast)
GSM956925PazD5(GSM956925)
"cell line: HEK293 cell linepassages: 15-20ip. (cell line)
SRR330897(SRX091735)
tissue: skin psoriatic uninvolveddisease stat. (skin)
SRR189779(GSM714639)
cell line: HEK293clip variant: PAR-CLIPenzyma. (cell line)
SRR040039(GSM532924)
G531T. (cervix)
SRR040025(GSM532910)
G613T. (cervix)
GSM532884(GSM532884)
G871T. (cervix)
SRR040022(GSM532907)
G575N. (cervix)
SRR033732(GSM497077)
bjab cell line (bjab103). (B cell)
SRR189780(GSM714640)
cell line: HEK293clip variant: PAR-CLIPenzyma. (cell line)
TAX577590(Rovira)
total RNA. (breast)
SRR040014(GSM532899)
G623N. (cervix)
SRR330861(SRX091699)
tissue: skin psoriatic involveddisease state:. (skin)
SRR330901(SRX091739)
tissue: skin psoriatic uninvolveddisease stat. (skin)
SRR029126(GSM416755)
143B. (cell line)
SRR330874(SRX091712)
tissue: skin psoriatic involveddisease state:. (skin)
SRR040038(GSM532923)
G531N. (cervix)
DRR000559(DRX000317)
"THP-1 whole cell RNA, no treatment". (cell line)
DRR001489(DRX001043)
"Hela short nuclear cell fraction, control". (hela)
GSM450608(GSM450608)
miRNA sequencing raw reads from post-mortem s. (brain)
SRR038860(GSM458543)
MM426. (cell line)
SRR189786SRR040032(GSM532917)
G603N. (cervix)
SRR330894(SRX091732)
tissue: skin psoriatic uninvolveddisease stat. (skin)
SRR330902(SRX091740)
tissue: skin psoriatic uninvolveddisease stat. (skin)
GSM450602(GSM450602)
miRNA sequencing raw reads from post-mortem s. (brain)
TAX577589(Rovira)
total RNA. (breast)
SRR039622(GSM531985)
HCV(+) Adjacent Tissue Sample. (liver)
SRR326282(GSM769512)
"Dicer mRNA was knocked down using siDicer, t. (cell line)
SRR033728(GSM497073)
MALT (MALT413). (B cell)
SRR038853(GSM458536)
MELB. (cell line)
SRR342898(SRX096794)
small RNA seq of Right atrial tissue. (heart)
SRR040035(GSM532920)
G001T. (cervix)
SRR342896(SRX096792)
small RNA seq of Right atrial tissue. (heart)
SRR189778(GSM714638)
cell line: HEK293clip variant: PAR-CLIPenzyma. (cell line)
SRR330895(SRX091733)
tissue: skin psoriatic uninvolveddisease stat. (skin)
SRR039624(GSM531987)
HBV(-) HCV(-) Adjacent Tissue Sample. (liver)
SRR040015(GSM532900)
G623T. (cervix)
SRR330887(SRX091725)
tissue: skin psoriatic uninvolveddisease stat. (skin)
SRR330884(SRX091722)
tissue: skin psoriatic uninvolveddisease stat. (skin)
SRR330915(SRX091753)
tissue: normal skindisease state: normal. (skin)
SRR342900(SRX096796)
small RNA seq of Right atrial tissue. (heart)
SRR553573(SRX182779)
source: Cerebellum. (Cerebellum)
SRR330899(SRX091737)
tissue: skin psoriatic uninvolveddisease stat. (skin)
SRR330893(SRX091731)
tissue: skin psoriatic uninvolveddisease stat. (skin)
SRR553574(SRX182780)
source: Heart. (Heart)
.................................................................................................................................................................................................GAAGGGAGTGCCGGGGGCCGGAT.................................. 2312.002.00--------------------------------2.00---------------------------------------------------------------------
....................................................................................CGCGGGGGCGCGCGGGGGGGG................................................................................................................................................. 212.000.00--------1.00-----1.00---------------------------------------------------------------------------------------
...................................................................................................................................................................................................................CCTTCCCCAGCAGGCACG..................... 181.000.00---------------------------------------------------------------------------1.00--------------------------
.................................................................................................................................................................................................................CCCTAGGCCTGCTGGGGAAGGGA.................. 2311.001.00---------------------------------------------------------------------1.00--------------------------------
...........................................................................................................................................................................................CGGAGCATCCGGCCCTATC............................................ 191.000.00-------------------------------------------------------------1.00----------------------------------------
.............................................GCCGTCGGAGCACCTCGC........................................................................................................................................................................................... 1811.001.00--------------------------------------------------------------------------1.00---------------------------
........................................................................................................................................................................................GAGCGGAGCATCCGGCA................................................. 171.000.00--------------------------------------------------1.00---------------------------------------------------
......................................................................................................................GCGGCCCCAGCCGGGGAGCC................................................................................................................ 201.000.00---1.00--------------------------------------------------------------------------------------------------
.......................................................CCGACGGCCGGGCGGGCGGGCAGGCCGGGCGGGC................................................................................................................................................................. 341.000.00----------------------------------------------------------------------------------1.00-------------------
.................................................................................GGGCGCGGGGGCGCGCGTA...................................................................................................................................................... 1971.000.00------------------------------------------1.00-----------------------------------------------------------
.................................................................................GGGCGCGGGGGCGCGCA........................................................................................................................................................ 171.000.00--------1.00---------------------------------------------------------------------------------------------
..............................................................................................................................................................................................................CACTCCCTTCCCCAGTTTA......................... 191.000.00---------------------------------------------------------------------------------1.00--------------------
................................................................................GCGCGCCCCCGCGCCCG......................................................................................................................................................... 1750.600.60--------0.40-----0.20---------------------------------------------------------------------------------------