ID: uc002iqm.2_intron_46_0_chr17_48276689_r
GENE: (4)
chr17:48276639-48276828-


(1)
AGO1.ip
(3)
BRAIN
(10)
BREAST
(9)
CELL-LINE
(3)
CERVIX
(3)
FIBROBLAST
(2)
HEART
(1)
HELA
(8)
LIVER
(1)
OTHER
(49)
SKIN
(3)
UTERUS
(1)
XRN.ip

Sense strand
CCCCAATCCCACAGGGACCCAAGGGAGACACTGGCCCCCGAGGCCCAAGGGTAAGCGTTGCACTCTGGGCTGTGGGGGGCTGCAGGTGGGCATGGCTCTCGGCCCCACGCTCACCCCGGCCCCGCCCTCTCCCCCTGCAGGGACCCGCAGGCCCCCCTGGCCGAGATGGCATCCCTGGACAGCCTGGACT
.....................................................................(((..(((((.....(((((((..(((.....)))....)))))))..(((...)))....)))))..)))..................................................
...................................................................68......................................................................140................................................
SizePerfect hitTotal NormPerfect NormSRR107296(GSM677703)
18-30nt fraction of small RNA. (cell line)
DRR001485(DRX001039)
"Hela long total cell fraction, LNA(+)". (hela)
SRR107297(GSM677704)
18-30nt fraction of small RNA. (cell line)
SRR330874(SRX091712)
tissue: skin psoriatic involveddisease state:. (skin)
SRR330913(SRX091751)
tissue: normal skindisease state: normal. (skin)
SRR094129(GSM651905)
small RNA(18-35nt)small RNA deep sequencing o. (uterus)
SRR037876(GSM522374)
fibroblasts_cell_culture. (fibroblast)
SRR038854(GSM458537)
MM653. (cell line)
SRR330894(SRX091732)
tissue: skin psoriatic uninvolveddisease stat. (skin)
SRR330912(SRX091750)
tissue: normal skindisease state: normal. (skin)
SRR207110(GSM721072)
Nuclear RNA. (cell line)
SRR094131(GSM651907)
small RNA(18-35nt)small RNA deep sequencing o. (uterus)
SRR330864(SRX091702)
tissue: skin psoriatic involveddisease state:. (skin)
SRR330896(SRX091734)
tissue: skin psoriatic uninvolveddisease stat. (skin)
SRR330919(SRX091757)
tissue: normal skindisease state: normal. (skin)
SRR330881(SRX091719)
tissue: skin psoriatic uninvolveddisease stat. (skin)
SRR330867(SRX091705)
tissue: skin psoriatic involveddisease state:. (skin)
SRR330880(SRX091718)
tissue: skin psoriatic involveddisease state:. (skin)
SRR039625(GSM531988)
HBV(-) HCV(-) HCC Tissue Sample. (liver)
SRR330910(SRX091748)
tissue: normal skindisease state: normal. (skin)
SRR330903(SRX091741)
tissue: skin psoriatic uninvolveddisease stat. (skin)
TAX577740(Rovira)
total RNA. (breast)
SRR040008(GSM532893)
G727N. (cervix)
SRR390723(GSM850202)
total small RNA. (cell line)
SRR330916(SRX091754)
tissue: normal skindisease state: normal. (skin)
SRR330914(SRX091752)
tissue: normal skindisease state: normal. (skin)
SRR330905(SRX091743)
tissue: normal skindisease state: normal. (skin)
SRR330904(SRX091742)
tissue: normal skindisease state: normal. (skin)
SRR330885(SRX091723)
tissue: skin psoriatic uninvolveddisease stat. (skin)
SRR330870(SRX091708)
tissue: skin psoriatic involveddisease state:. (skin)
SRR330887(SRX091725)
tissue: skin psoriatic uninvolveddisease stat. (skin)
SRR444059(SRX128907)
Sample 17cDNABarcode: AF-PP-339: ACG CTC TTC . (skin)
SRR330872(SRX091710)
tissue: skin psoriatic involveddisease state:. (skin)
SRR039616(GSM531979)
HBV(+) Distal Tissue Sample 1. (liver)
SRR191528(GSM715638)
130genomic small RNA (size selected RNA from . (breast)
TAX577580(Rovira)
total RNA. (breast)
SRR330873(SRX091711)
tissue: skin psoriatic involveddisease state:. (skin)
SRR330879(SRX091717)
tissue: skin psoriatic involveddisease state:. (skin)
SRR039615(GSM531978)
Severe Chronic Hepatitis B Liver Tissue. (liver)
SRR039620(GSM531983)
HBV(+) Adjacent Tissue Sample 2. (liver)
SRR191604(GSM715714)
74genomic small RNA (size selected RNA from t. (breast)
SRR330906(SRX091744)
tissue: normal skindisease state: normal. (skin)
SRR191590(GSM715700)
48genomic small RNA (size selected RNA from t. (breast)
GSM450601(GSM450601)
miRNA sequencing raw reads from post-mortem s. (brain)
SRR191592(GSM715702)
59genomic small RNA (size selected RNA from t. (breast)
SRR207113(GSM721075)
IP against AGO 1 & 2. (ago1/2 cell line)
SRR444058(SRX128906)
Sample 16cDNABarcode: AF-PP-335: ACG CTC TTC . (skin)
SRR330863(SRX091701)
tissue: skin psoriatic involveddisease state:. (skin)
SRR191407(GSM715517)
81genomic small RNA (size selected RNA from t. (breast)
SRR039618(GSM531981)
HBV(+) Side Tissue Sample 1. (liver)
SRR330890(SRX091728)
tissue: skin psoriatic uninvolveddisease stat. (skin)
SRR330898(SRX091736)
tissue: skin psoriatic uninvolveddisease stat. (skin)
SRR342901(SRX096797)
small RNA seq of Left atrial tissue. (heart)
SRR191588(GSM715698)
52genomic small RNA (size selected RNA from t. (breast)
SRR326279(GSM769509)
cytoplasmic fraction was isolated using PARIS. (cell line)
SRR040009(GSM532894)
G727T. (cervix)
SRR039617(GSM531980)
HBV(+) Adjacent Tissue Sample 1. (liver)
SRR330909(SRX091747)
tissue: normal skindisease state: normal. (skin)
SRR330897(SRX091735)
tissue: skin psoriatic uninvolveddisease stat. (skin)
SRR040031(GSM532916)
G013T. (cervix)
TAX577739(Rovira)
total RNA. (breast)
SRR330884(SRX091722)
tissue: skin psoriatic uninvolveddisease stat. (skin)
SRR094132(GSM651908)
small RNA(18-35nt)small RNA deep sequencing o. (uterus)
TAX577741(Rovira)
total RNA. (breast)
SRR330917(SRX091755)
tissue: normal skindisease state: normal. (skin)
SRR330871(SRX091709)
tissue: skin psoriatic involveddisease state:. (skin)
SRR330861(SRX091699)
tissue: skin psoriatic involveddisease state:. (skin)
SRR363676(GSM830253)
cell type: human foreskin fibroblasts (HFF)tr. (fibroblast)
SRR207115(GSM721077)
XRN1&2 knockdown. (XRN1/XRN2 cell line)
SRR330877(SRX091715)
tissue: skin psoriatic involveddisease state:. (skin)
SRR189786SRR330915(SRX091753)
tissue: normal skindisease state: normal. (skin)
SRR330869(SRX091707)
tissue: skin psoriatic involveddisease state:. (skin)
SRR342897(SRX096793)
small RNA seq of Left atrial tissue. (heart)
SRR330866(SRX091704)
tissue: skin psoriatic involveddisease state:. (skin)
GSM450597(GSM450597)
miRNA sequencing raw reads from post-mortem s. (brain)
SRR330878(SRX091716)
tissue: skin psoriatic involveddisease state:. (skin)
SRR363674(GSM830251)
cell type: human foreskin fibroblasts (HFF)tr. (fibroblast)
SRR330886(SRX091724)
tissue: skin psoriatic uninvolveddisease stat. (skin)
GSM450598(GSM450598)
miRNA sequencing raw reads from post-mortem s. (brain)
SRR330895(SRX091733)
tissue: skin psoriatic uninvolveddisease stat. (skin)
SRR326281(GSM769511)
"Dicer mRNA was knocked down using siDicer, c. (cell line)
SRR039624(GSM531987)
HBV(-) HCV(-) Adjacent Tissue Sample. (liver)
SRR330859(SRX091697)
tissue: skin psoriatic involveddisease state:. (skin)
SRR330902(SRX091740)
tissue: skin psoriatic uninvolveddisease stat. (skin)
SRR330868(SRX091706)
tissue: skin psoriatic involveddisease state:. (skin)
SRR444045(SRX128893)
Sample 6cDNABarcode: AF-PP-341: ACG CTC TTC C. (skin)
SRR039623(GSM531986)
HCV(+) HCC Tissue Sample. (liver)
SRR330865(SRX091703)
tissue: skin psoriatic involveddisease state:. (skin)
SRR444060(SRX128908)
Sample 18cDNABarcode: AF-PP-340: ACG CTC TTC . (skin)
SRR330923(SRX091761)
tissue: normal skindisease state: normal. (skin)
SRR330862(SRX091700)
tissue: skin psoriatic involveddisease state:. (skin)
.......................................................................................................................CCCCGCCCTCTCCCCCTGCAGT.................................................2217.001.00--------1.00------1.00--------2.00----1.001.00----------1.00--------------------------------------------------
........................................................................TGGGGGGCTGCAGGTGGGCATGG...............................................................................................2315.005.00--4.00--------------------1.00--------------------------------------------------------------------
............AGGGACCCAAGGGAGACAC...............................................................................................................................................................1915.005.00-----2.00------------2.00--------------1.00----------------------------------------------------------
.........................................................................................................................................................CCCCTGGCCGAGATGGC....................1715.005.00----1.00------------1.00------------------1.00-------------1.00-----------------------------1.00-----------
........................................................................TGGGGGGCTGCAGGTGGGCATGGA..............................................................................................2415.005.00--1.00---3.00----------------------------1.00--------------------------------------------------------
..................................................................................................................................................................GAGATGGCATCCCTGGACAGC.......2114.004.001.00--------1.00----2.00-----------------------------------------------------------------------------
..............................................................................................................................................................GGCCGAGATGGCATCCCTGGACA.........2314.004.003.00------1.00------------------------------------------------------------------------------------
..................................................GTAAGCGTTGCACTCTGGGCTGTGGGGGGCTGCAGGTGGGCATGGCTCTCGGCCCCACGCTCACC...........................................................................6514.004.00-4.00------------------------------------------------------------------------------------------
............AGGGACCCAAGGGAGACACT..............................................................................................................................................................2014.004.001.00----------1.00----------------------------------------1.00---------1.00-----------------------------
.........................................................................................................................................................................CATCCCTGGACAGCCTGG...1814.004.00---3.001.00---------------------------------------------------------------------------------------
..................................................GTAAGCGTTGCACTCTGGGCTGTGGGGGGCTGCAGGTGGGCATGGCTCTCGGCCCCACGCTCACCCCGGCCCCGCCCTCTCCCCCTGCAG..................................................9014.004.00-4.00------------------------------------------------------------------------------------------
............AGGGACCCAAGGGAGACA................................................................................................................................................................1814.004.003.00----------------------------------------------------------1.00--------------------------------
.......................................................................................................................................................CCCCCCTGGCCGAGATGGC....................1913.003.00----------2.00---------1.00-----------------------------------------------------------------------
..................................................................................................................................................................GAGATGGCATCCCTGGACA.........1913.003.001.00------------1.00-------------------------1.00----------------------------------------------------
.............GGGACCCAAGGGAGACAC...............................................................................................................................................................1813.003.003.00-------------------------------------------------------------------------------------------
...............................................................................................................................................................GCCGAGATGGCATCCCTGGACA.........2213.003.002.00------1.00------------------------------------------------------------------------------------
.............GGGACCCAAGGGAGACACT..............................................................................................................................................................1913.003.001.00----2.00--------------------------------------------------------------------------------------
..........................................................................................................................................................................ATCCCTGGACAGCCTGGC..182.000.00-------------------2.00------------------------------------------------------------------------
.................................................................................................................................................................CGAGATGGCATCCCTGGAC..........1912.002.00----------------------------------------------------------1.00-------------1.00-------------------
........................................................................TGGGGGGCTGCAGGTGGGCAT.................................................................................................2112.002.001.00-1.00-----------------------------------------------------------------------------------------
.............................................................................................................................................................TGGCCGAGATGGCATCCCTGGACA.........2412.002.002.00-------------------------------------------------------------------------------------------
.................................................................................................................................................................CGAGATGGCATCCCTGGACAGCCT.....2412.002.00-------1.00-----------------1.00------------------------------------------------------------------
....................AAGGGAGACACTGGCCCCCGAGGCCC................................................................................................................................................2612.002.002.00-------------------------------------------------------------------------------------------
.....................................................................................................................................................................ATGGCATCCCTGGACAGCCTGGA..2312.002.00-----------------------------------------------------------------------1.00-----------1.00--------
....................................................................................................................................................................GATGGCATCCCTGGACAGC.......1912.002.00----2.00---------------------------------------------------------------------------------------
............................................................................................................................................................CTGGCCGAGATGGCATCCCTGGACA.........2512.002.00---------------1.00-----------------------------------------------------------1.00----------------
......................................................................TGTGGGGGGCTGCAGGTGGGCA..................................................................................................2211.001.00---------------------------------------------1.00----------------------------------------------
...............................................................................CTGCAGGTGGGCATGGCTCTAA.........................................................................................221.000.001.00-------------------------------------------------------------------------------------------
....................................CCCGAGGCCCAAGGGGA.........................................................................................................................................171.000.00-------------1.00------------------------------------------------------------------------------
........................................................................TGGGGGGCTGCAGGTGGGCATGGT..............................................................................................2411.005.00--1.00-----------------------------------------------------------------------------------------
........................................................................................................................CCCGCCCTCTCCCCCTCCC...................................................191.000.00----------------------1.00---------------------------------------------------------------------
.....................................................................................GTGGGCATGGCTCTCGGC.......................................................................................1811.001.00---------------------------1.00----------------------------------------------------------------
........................................................................TGGGGGGCTGCAGGTGGGCATGGTA.............................................................................................2511.005.00------1.00-------------------------------------------------------------------------------------
................................................................................................................................................................CCGAGATGGCATCCCTGG............1811.001.00-------------------------------------------------1.00------------------------------------------
...............................................................TCTGGGCTGTGGGGGGC..............................................................................................................1721.001.00------------------------------------------------------1.00-------------------------------------
..............................CTGGCCCCCGAGGCCCAAGGGG..........................................................................................................................................2211.001.00------------------------------------------1.00-------------------------------------------------
.......................................................................................................................CCCCGCCCTCTCCCCCTGCAG..................................................2111.001.00--------------------------------------------------------------------------1.00-----------------
............AGGGACCCAAGGGAGACACTGG............................................................................................................................................................2211.001.00---------1.00----------------------------------------------------------------------------------
.............................ACTGGCCCCCGAGGCCCAAGGC...........................................................................................................................................221.000.00----------------------------------------------------------------------1.00---------------------
.................CCCAAGGGAGACACTGGCCCCCGAGGCCC................................................................................................................................................2911.001.00----1.00---------------------------------------------------------------------------------------
......................................................................................................................................................GCCCCCCTGGCCGAGTGT......................181.000.00---------------------1.00----------------------------------------------------------------------
.....................................................................................................................................................GGCCCCCCTGGCCGAGATGGC....................2111.001.00------------1.00-------------------------------------------------------------------------------
.......................................................................................................................................................CCCCCCTGGCCGAGACGGC....................191.000.00----------1.00---------------------------------------------------------------------------------
.......................................................................................................................CCCCGCCCTCTCCCCCTGCAGTA................................................2311.001.00-------------------------------------1.00------------------------------------------------------
............................................................................................................................................................................CCCTGGACAGCCTGGACCGGC211.000.00--------------------1.00-----------------------------------------------------------------------
....................................................................................................................................................................GATGGCATCCCTGGACAG........1811.001.00---1.00----------------------------------------------------------------------------------------
................................................................................................................................................CCGCAGGCCCCCCTGGCCGAGATGGCATC.................2911.001.00-------------------------------------------------------------1.00------------------------------
.................................................................................................................................................................CGAGATGGCATCCCTGGACA.........2011.001.001.00-------------------------------------------------------------------------------------------
...............................................................................................................................................................GCCGAGATGGCATCCCTGGACAGCCT.....2611.001.00-----------1.00--------------------------------------------------------------------------------
..................................................GTAAGCGTTGCACTCTGGGCTGTGGGGGGCTGCAGGTGGGCATGGCTCTCGGCCCCACGCTCACCCCGGCCCCGCCCTCTCCCCCTGCAC..................................................901.000.00-1.00------------------------------------------------------------------------------------------
.............GGGACCCAAGGGAGAAGCC..............................................................................................................................................................191.000.001.00-------------------------------------------------------------------------------------------
.............................................................................................GGCTCTCGGCCCCACGCTCACC...........................................................................2211.001.00-------------------------------------------------------------------1.00------------------------
.............GGGACCCAAGGGAGACACTGGCCCCCGAGGCC.................................................................................................................................................3211.001.00---------------------1.00----------------------------------------------------------------------
................................................GGGTAAGCGTTGCACTCTGGGCT.......................................................................................................................2311.001.00-----------------1.00--------------------------------------------------------------------------
.........................................................................................................................................................CCCCTGGCCGAGATGGCAT..................1911.001.00------------------------------------------------------------------1.00-------------------------
..................................................GTAAGCGTTGCACTCTGGG.........................................................................................................................1911.001.00----------------------------------------------1.00---------------------------------------------
....................AAGGGAGACACTGGCCCCCGAGGCCCAA..............................................................................................................................................2811.001.001.00-------------------------------------------------------------------------------------------
..........................................................................................................ACGCTCACCCCGGCCCCGCCA...............................................................211.000.00-----------------------------------------------------------------1.00--------------------------
..........................................................................................CATGGCTCTCGGCCCCACGCTCACCCCGGC......................................................................3011.001.00--------1.00-----------------------------------------------------------------------------------
.....................................................................................................................................................................ATGGCATCCCTGGACAGCC......1911.001.001.00-------------------------------------------------------------------------------------------
..................................................................................................................................................................GAGATGGCATCCCTGGACAGCCTGG...2511.001.00---------------------------------------------------------------1.00----------------------------
......................GGGAGACACTGGCCCCCGAGG...................................................................................................................................................2111.001.00--------------------------------------------------------1.00-----------------------------------
..................................................................................................................................................................GAGATGGCATCCCTGGACAGCC......2211.001.00----------------------------1.00---------------------------------------------------------------
.......CCCACAGGGACCCAAGGGAGA..................................................................................................................................................................2111.001.00----------------------------------1.00---------------------------------------------------------
.................................................................................................................................................CGCAGGCCCCCCTGGCCGAGATGGC....................2511.001.00------------1.00-------------------------------------------------------------------------------
.............................ACTGGCCCCCGAGGCCC................................................................................................................................................1711.001.00--------------------------------1.00-----------------------------------------------------------
.......................................................................................................................CCCCGCCCTCTCCCCCTGCAGA.................................................2211.001.00-------------------------------1.00------------------------------------------------------------
...........................................................................................................CGCTCACCCCGGCCCCGCCCTCTTT..........................................................251.000.00-----------------------------------------------------------------------------1.00--------------
............................................................................................................................................................CTGGCCGAGATGGCAT..................1611.001.00------------1.00-------------------------------------------------------------------------------
................................................................................................................................................................CCGAGATGGCATCCCTGGACAGCCTGGAC.2911.001.00--------1.00-----------------------------------------------------------------------------------
.....................AGGGAGACACTGGCCCCCG......................................................................................................................................................1911.001.001.00-------------------------------------------------------------------------------------------
............AGGGACCCAAGGGAGACACTGGC...........................................................................................................................................................2311.001.001.00-------------------------------------------------------------------------------------------
............AGGGACCCAAGGGAGACACTGGCC..........................................................................................................................................................2411.001.001.00-------------------------------------------------------------------------------------------
........................................................................................................................................................CCCCCTGGCCGAGATGGCATCCC...............2311.001.00---1.00----------------------------------------------------------------------------------------
............................................................................................................................................................CTGGCCGAGATGGCATCCCTGGA...........2311.001.00----------------------------------------------------------------------------------1.00---------
................................................................................................................................................................CCGAGATGGCATCCCTGGACAG........2211.001.00----------------------------------------1.00---------------------------------------------------
.......................................................................GTGGGGGGCTGCAGGTGGGCT..................................................................................................211.000.001.00-------------------------------------------------------------------------------------------
.............GGGACCCAAGGGAGACA................................................................................................................................................................1721.001.00-----1.00--------------------------------------------------------------------------------------
..............................CTGGCCCCCGAGGCCCAAGGG...........................................................................................................................................2111.001.00---------------------------------------------------------------------1.00----------------------
.....................................................................................................................................................GGCCCCCCTGGCCGAGATGGCATCCCTGGAC..........3111.001.00----------------1.00---------------------------------------------------------------------------
......................................................................................TGGGCATGGCTCTCGGC.......................................................................................1711.001.00-------------------------------------------------------------------------1.00------------------
..................................................................................................................................................GCAGGCCCCCCTGGCCGAGATGGC....................2411.001.00--------------1.00-----------------------------------------------------------------------------
...................CAAGGGAGACACTGGCCCCCGAGGCCC................................................................................................................................................2711.001.001.00-------------------------------------------------------------------------------------------
......................................................................................................................................................................TGGCATCCCTGGACAGCCTGGACTTAGG281.000.00----------------1.00---------------------------------------------------------------------------
......................................................GCGTTGCACTCTGGGCTGGGGG..................................................................................................................221.000.00-----------------------1.00--------------------------------------------------------------------
...............................................................................CTGCAGGTGGGCATGGCTCTCG.........................................................................................2211.001.00-------------------------------------------------------------------------------1.00------------
..................................................................................................................................................................GAGATGGCATCCCTGGACAG........2011.001.001.00-------------------------------------------------------------------------------------------
......................................CGAGGCCCAAGGGTAAGCGT....................................................................................................................................2011.001.00---------------------------------------------------1.00----------------------------------------
................................................................................................................................................................CCGAGATGGCATCCCTGGACA.........2111.001.001.00-------------------------------------------------------------------------------------------
.........................................................................................................................................................CCCCTGGCCGAGATGGCATC.................2011.001.00----------------------------------------------------------------1.00---------------------------
.....................AGGGAGACACTGGCCCCCGC.....................................................................................................................................................2011.001.00----------------------1.00---------------------------------------------------------------------
.....................AGGGAGACACTGGCCCCCGAGGCCC................................................................................................................................................2511.001.001.00-------------------------------------------------------------------------------------------
............AGGGACCCAAGGGAGACACCGGC...........................................................................................................................................................2311.005.00---------1.00----------------------------------------------------------------------------------
........................................................................TGGGGGGCTGCAGGTGGGC...................................................................................................1911.001.00--------------------------------------------------------------------1.00-----------------------
................ACCCAAGGGAGACACTGG............................................................................................................................................................1811.001.00-----------------------------------------------------1.00--------------------------------------
.................................................................................................................................TCCCCCTGCAGGGACCA............................................171.000.00------------------------------------------------------------1.00-------------------------------
..........................................................................................................................................................................ATCCCTGGACAGCCTGGA..1811.001.00------------------------------------------------1.00-------------------------------------------
...............................................................................................................................................................GCCGAGATGGCATCCCTGGACAGCC......2511.001.001.00-------------------------------------------------------------------------------------------
................................................................................TGCAGGTGGGCATGGCTCTCGG........................................................................................2211.001.00-----------1.00--------------------------------------------------------------------------------
......................................................................................................................................................................TGGCATCCCTGGACAGCCTGGA..2211.001.00--------------------------1.00-----------------------------------------------------------------
........................................................................TGGGGGGCTGCAGGTGGGCATG................................................................................................2211.001.00-------1.00------------------------------------------------------------------------------------
...................CAAGGGAGACACTGGCCCCCGAGGCC.................................................................................................................................................2611.001.001.00-------------------------------------------------------------------------------------------
.........................AGACACTGGCCCCCG......................................................................................................................................................1511.001.00---1.00----------------------------------------------------------------------------------------
.........................................................................................................................................................CCCCTGGCCGAGATGGCA...................1811.001.00----------------------------------------------------------------------------1.00---------------
.....................................................................................................................................................GGCCCCCCTGGCCGAGATGGCATCCCTG.............2811.001.00-----------------------------------------------1.00--------------------------------------------
..............................................................................................................................................................GGCCGAGATGGCATCCC...............1711.001.00-------------1.00------------------------------------------------------------------------------
...........................................................................GGGGCTGCAGGTGGGCATGGCTC............................................................................................2311.001.00--------------------------------------1.00-----------------------------------------------------
.............GGGACCCAAGGGAGACACTGGCCC.........................................................................................................................................................2411.001.00--------------------------------------------1.00-----------------------------------------------
........................................................................TGGGGGGCTGCAGGTGGGCATGGAT.............................................................................................2511.005.001.00-------------------------------------------------------------------------------------------
............AGGGACCCAAGGGAGAC.................................................................................................................................................................1730.670.67----------------------------0.33------------------------------------------------------------0.33--
.................CCCAAGGGAGACACTGG............................................................................................................................................................1730.670.67---------------------------0.33------------------------------------------------------------0.33---
...........................................................................................................................................................................TCCCTGGACAGCCTGGAC.1820.500.50---------------0.50----------------------------------------------------------------------------
.....................................................................................................................................................................ATGGCATCCCTGGACAG........1720.500.50-------------------------------------------------------------------------------------0.50------
..............................................................CTCTGGGCTGTGGGGGGC..............................................................................................................1820.500.50---------------------------------------------------------------------------------------0.50----
...............GACCCAAGGGAGACACTG.............................................................................................................................................................1820.500.50--------------------------------------------------------------------------------------0.50-----
..............................................................................................................................................................................CTGGACAGCCTGGACT1650.400.40-------------------------0.20-----------------------------------------------------------0.20------
........................................................................................................................................................................GCATCCCTGGACAGCC......1630.330.33-------------------------0.33------------------------------------------------------------------
.................................................................................................................................................................CGAGATGGCATCCCT..............1540.250.25-------------------------------------------------------------------------------------------0.25
...............................................................................CTGCAGGTGGGCATGGC..............................................................................................1740.250.25------------------------------------------------------------------------------------------0.25-
..............................................................................................GCTCTCGGCCCCACGC................................................................................1640.250.25-----------------------------0.25--------------------------------------------------------------
..................CCAAGGGAGACACTGG............................................................................................................................................................1650.200.20----0.20---------------------------------------------------------------------------------------
.............GGGACCCAAGGGAGAC.................................................................................................................................................................1650.200.20------------------------------0.20-------------------------------------------------------------
.....................................................................................................................................................................ATGGCATCCCTGGACA.........1670.140.14--------0.14-----------------------------------------------------------------------------------
..............GGACCCAAGGGAGAC.................................................................................................................................................................1570.140.14---------------------------0.14----------------------------------------------------------------
...........................................................................................................................................................................TCCCTGGACAGCCTGG...1680.120.12--------0.12-----------------------------------------------------------------------------------
....................AAGGGAGACACTGGC...........................................................................................................................................................1590.110.11-------------------------------0.11------------------------------------------------------------

Antisense strand
CCCCAATCCCACAGGGACCCAAGGGAGACACTGGCCCCCGAGGCCCAAGGGTAAGCGTTGCACTCTGGGCTGTGGGGGGCTGCAGGTGGGCATGGCTCTCGGCCCCACGCTCACCCCGGCCCCGCCCTCTCCCCCTGCAGGGACCCGCAGGCCCCCCTGGCCGAGATGGCATCCCTGGACAGCCTGGACT
.....................................................................(((..(((((.....(((((((..(((.....)))....)))))))..(((...)))....)))))..)))..................................................
...................................................................68......................................................................140................................................
SizePerfect hitTotal NormPerfect NormSRR107296(GSM677703)
18-30nt fraction of small RNA. (cell line)
DRR001485(DRX001039)
"Hela long total cell fraction, LNA(+)". (hela)
SRR107297(GSM677704)
18-30nt fraction of small RNA. (cell line)
SRR330874(SRX091712)
tissue: skin psoriatic involveddisease state:. (skin)
SRR330913(SRX091751)
tissue: normal skindisease state: normal. (skin)
SRR094129(GSM651905)
small RNA(18-35nt)small RNA deep sequencing o. (uterus)
SRR037876(GSM522374)
fibroblasts_cell_culture. (fibroblast)
SRR038854(GSM458537)
MM653. (cell line)
SRR330894(SRX091732)
tissue: skin psoriatic uninvolveddisease stat. (skin)
SRR330912(SRX091750)
tissue: normal skindisease state: normal. (skin)
SRR207110(GSM721072)
Nuclear RNA. (cell line)
SRR094131(GSM651907)
small RNA(18-35nt)small RNA deep sequencing o. (uterus)
SRR330864(SRX091702)
tissue: skin psoriatic involveddisease state:. (skin)
SRR330896(SRX091734)
tissue: skin psoriatic uninvolveddisease stat. (skin)
SRR330919(SRX091757)
tissue: normal skindisease state: normal. (skin)
SRR330881(SRX091719)
tissue: skin psoriatic uninvolveddisease stat. (skin)
SRR330867(SRX091705)
tissue: skin psoriatic involveddisease state:. (skin)
SRR330880(SRX091718)
tissue: skin psoriatic involveddisease state:. (skin)
SRR039625(GSM531988)
HBV(-) HCV(-) HCC Tissue Sample. (liver)
SRR330910(SRX091748)
tissue: normal skindisease state: normal. (skin)
SRR330903(SRX091741)
tissue: skin psoriatic uninvolveddisease stat. (skin)
TAX577740(Rovira)
total RNA. (breast)
SRR040008(GSM532893)
G727N. (cervix)
SRR390723(GSM850202)
total small RNA. (cell line)
SRR330916(SRX091754)
tissue: normal skindisease state: normal. (skin)
SRR330914(SRX091752)
tissue: normal skindisease state: normal. (skin)
SRR330905(SRX091743)
tissue: normal skindisease state: normal. (skin)
SRR330904(SRX091742)
tissue: normal skindisease state: normal. (skin)
SRR330885(SRX091723)
tissue: skin psoriatic uninvolveddisease stat. (skin)
SRR330870(SRX091708)
tissue: skin psoriatic involveddisease state:. (skin)
SRR330887(SRX091725)
tissue: skin psoriatic uninvolveddisease stat. (skin)
SRR444059(SRX128907)
Sample 17cDNABarcode: AF-PP-339: ACG CTC TTC . (skin)
SRR330872(SRX091710)
tissue: skin psoriatic involveddisease state:. (skin)
SRR039616(GSM531979)
HBV(+) Distal Tissue Sample 1. (liver)
SRR191528(GSM715638)
130genomic small RNA (size selected RNA from . (breast)
TAX577580(Rovira)
total RNA. (breast)
SRR330873(SRX091711)
tissue: skin psoriatic involveddisease state:. (skin)
SRR330879(SRX091717)
tissue: skin psoriatic involveddisease state:. (skin)
SRR039615(GSM531978)
Severe Chronic Hepatitis B Liver Tissue. (liver)
SRR039620(GSM531983)
HBV(+) Adjacent Tissue Sample 2. (liver)
SRR191604(GSM715714)
74genomic small RNA (size selected RNA from t. (breast)
SRR330906(SRX091744)
tissue: normal skindisease state: normal. (skin)
SRR191590(GSM715700)
48genomic small RNA (size selected RNA from t. (breast)
GSM450601(GSM450601)
miRNA sequencing raw reads from post-mortem s. (brain)
SRR191592(GSM715702)
59genomic small RNA (size selected RNA from t. (breast)
SRR207113(GSM721075)
IP against AGO 1 & 2. (ago1/2 cell line)
SRR444058(SRX128906)
Sample 16cDNABarcode: AF-PP-335: ACG CTC TTC . (skin)
SRR330863(SRX091701)
tissue: skin psoriatic involveddisease state:. (skin)
SRR191407(GSM715517)
81genomic small RNA (size selected RNA from t. (breast)
SRR039618(GSM531981)
HBV(+) Side Tissue Sample 1. (liver)
SRR330890(SRX091728)
tissue: skin psoriatic uninvolveddisease stat. (skin)
SRR330898(SRX091736)
tissue: skin psoriatic uninvolveddisease stat. (skin)
SRR342901(SRX096797)
small RNA seq of Left atrial tissue. (heart)
SRR191588(GSM715698)
52genomic small RNA (size selected RNA from t. (breast)
SRR326279(GSM769509)
cytoplasmic fraction was isolated using PARIS. (cell line)
SRR040009(GSM532894)
G727T. (cervix)
SRR039617(GSM531980)
HBV(+) Adjacent Tissue Sample 1. (liver)
SRR330909(SRX091747)
tissue: normal skindisease state: normal. (skin)
SRR330897(SRX091735)
tissue: skin psoriatic uninvolveddisease stat. (skin)
SRR040031(GSM532916)
G013T. (cervix)
TAX577739(Rovira)
total RNA. (breast)
SRR330884(SRX091722)
tissue: skin psoriatic uninvolveddisease stat. (skin)
SRR094132(GSM651908)
small RNA(18-35nt)small RNA deep sequencing o. (uterus)
TAX577741(Rovira)
total RNA. (breast)
SRR330917(SRX091755)
tissue: normal skindisease state: normal. (skin)
SRR330871(SRX091709)
tissue: skin psoriatic involveddisease state:. (skin)
SRR330861(SRX091699)
tissue: skin psoriatic involveddisease state:. (skin)
SRR363676(GSM830253)
cell type: human foreskin fibroblasts (HFF)tr. (fibroblast)
SRR207115(GSM721077)
XRN1&2 knockdown. (XRN1/XRN2 cell line)
SRR330877(SRX091715)
tissue: skin psoriatic involveddisease state:. (skin)
SRR189786SRR330915(SRX091753)
tissue: normal skindisease state: normal. (skin)
SRR330869(SRX091707)
tissue: skin psoriatic involveddisease state:. (skin)
SRR342897(SRX096793)
small RNA seq of Left atrial tissue. (heart)
SRR330866(SRX091704)
tissue: skin psoriatic involveddisease state:. (skin)
GSM450597(GSM450597)
miRNA sequencing raw reads from post-mortem s. (brain)
SRR330878(SRX091716)
tissue: skin psoriatic involveddisease state:. (skin)
SRR363674(GSM830251)
cell type: human foreskin fibroblasts (HFF)tr. (fibroblast)
SRR330886(SRX091724)
tissue: skin psoriatic uninvolveddisease stat. (skin)
GSM450598(GSM450598)
miRNA sequencing raw reads from post-mortem s. (brain)
SRR330895(SRX091733)
tissue: skin psoriatic uninvolveddisease stat. (skin)
SRR326281(GSM769511)
"Dicer mRNA was knocked down using siDicer, c. (cell line)
SRR039624(GSM531987)
HBV(-) HCV(-) Adjacent Tissue Sample. (liver)
SRR330859(SRX091697)
tissue: skin psoriatic involveddisease state:. (skin)
SRR330902(SRX091740)
tissue: skin psoriatic uninvolveddisease stat. (skin)
SRR330868(SRX091706)
tissue: skin psoriatic involveddisease state:. (skin)
SRR444045(SRX128893)
Sample 6cDNABarcode: AF-PP-341: ACG CTC TTC C. (skin)
SRR039623(GSM531986)
HCV(+) HCC Tissue Sample. (liver)
SRR330865(SRX091703)
tissue: skin psoriatic involveddisease state:. (skin)
SRR444060(SRX128908)
Sample 18cDNABarcode: AF-PP-340: ACG CTC TTC . (skin)
SRR330923(SRX091761)
tissue: normal skindisease state: normal. (skin)
SRR330862(SRX091700)
tissue: skin psoriatic involveddisease state:. (skin)
...........................................................................................................................CCTGCAGGGGGAGAGGGC................................................. 1821.001.00--------------------------0.50---------------------------------------------------------0.50-------
...............................................................................................................................................CCAGGGGGGCCTGCGGG.............................. 1711.001.00---------------------------------------------------------------------------------1.00----------
........CCACAGGGACCCAAGGCAAT.................................................................................................................................................................. 201.000.00---------------------------------------------------------1.00----------------------------------
......TCCCACAGGGACCCAAGGA..................................................................................................................................................................... 191.000.00------------------------------------------------------------------------------1.00-------------
........................................................................................................................CCCGCCCTCTCCCCCTAGC................................................... 191.000.00-------------------------------------------------------1.00------------------------------------
.........................................................................................................................CCGCCCTCTCCCCCTTCT................................................... 181.000.00-------------------------------------------1.00------------------------------------------------
...........................................................................................................................CTGCAGGGGGAGAGGGC.................................................. 1730.330.33------------------------------------------------------------------------------------0.33-------