ID: uc002ign.0
GENE: SLC25A39(11)
chr17:42397435-42397613-


(2)
AGO1.ip 		(1)
AGO1.ip OTHER.mut 		(3)
AGO2.ip 		(1)
AGO3.ip 		(10)
B-CELL 		(6)
BRAIN 		(8)
BREAST 		(29)
CELL-LINE 		(1)
FIBROBLAST 		(4)
HEART 		(5)
HELA 		(6)
LIVER 		(3)
OTHER 		(1)
RRP40.ip 		(17)
SKIN 		(1)
TESTES 		(1)
UTERUS 		(1)
XRN.ip

Sense strand
GCTGCTGCGGAGGATCCGGGCCGAGTCGGGCACCAAGGGACTCTTTGCAGGTCAGTGTGTGGGTGTCGGGGGTGGGGGCATGGCGGACCTGCGACCTGACCCCTGACACGGGCCTCCTTTCCACTGCAGGCTTCCTTCCTCGGATCATCAAGGCTGCCCCCTCCTGTGCCATCATGATC
..........................................................((..(((((((((((.((((((.((....)))))..))).)))))))))))..))..................................................................
..................................................51..............................................................115..............................................................
SizePerfect hitTotal NormPerfect NormSRR207113(GSM721075)
IP against AGO 1 & 2. (ago1/2 cell line)		SRR326279(GSM769509)
cytoplasmic fraction was isolated using PARIS. (cell line)		SRR326282(GSM769512)
"Dicer mRNA was knocked down using siDicer, t. (cell line)		SRR326280(GSM769510)
total cell content of unperturbed cells was s. (cell line)		GSM1105749AGO2(GSM1105749)
small RNA sequencing data. (ago2 hela)		SRR387910(GSM843862)
antibody for ip: Ago2. (ago2 cell line)		SRR207114(GSM721076)
"IP against AGO 1 & 2, RRP40 knockdown". (ago1/2 RRP40 cell line)		SRR326281(GSM769511)
"Dicer mRNA was knocked down using siDicer, c. (cell line)		SRR207110(GSM721072)
Nuclear RNA. (cell line)		GSM1105750AGO3(GSM1105750)
small RNA sequencing data. (ago3 hela)		RoviraIPAgo2(Rovira)
total RNA. (ago2 breast)		SRR037935(GSM510473)
293cand3. (cell line)		SRR037936(GSM510474)
293cand1. (cell line)		GSM450608(GSM450608)
miRNA sequencing raw reads from post-mortem s. (brain)		SRR039623(GSM531986)
HCV(+) HCC Tissue Sample. (liver)		SRR037942(GSM510480)
293DroshaTN_cand5. (cell line)		SRR189784GSM1105748AGO1(GSM1105748)
small RNA sequencing data. (ago1 hela)		SRR343332(GSM796035)
"KSHV (HHV8), EBV (HHV-4)". (cell line)		GSM1105753INPUT(GSM1105753)
small RNA sequencing data. (hela)		SRR033721(GSM497066)
Ly3 cell line (Ly3). (B cell)		SRR033727(GSM497072)
HIV-positive DL (HIV412). (B cell)		SRR039622(GSM531985)
HCV(+) Adjacent Tissue Sample. (liver)		GSM541796(GSM541796)
undifferentiated human embryonic stem cells. (cell line)		SRR207116(GSM721078)
Nuclear RNA. (cell line)		SRR033723(GSM497068)
L1236 cell line (L1236). (B cell)		SRR033711(GSM497056)
GCB DLBCL (GCB110). (B cell)		SRR033722(GSM497067)
KMS12 cell line (KMS12). (B cell)		SRR330872(SRX091710)
tissue: skin psoriatic involveddisease state:. (skin)		SRR033719(GSM497064)
6hr Activated B cell line (ABC158). (B cell)		SRR191598(GSM715708)
79genomic small RNA (size selected RNA from t. (breast)		SRR330888(SRX091726)
tissue: skin psoriatic uninvolveddisease stat. (skin)		SRR553572(SRX182778)
source: Frontal Cortex. (Frontal Cortex)		GSM450604(GSM450604)
miRNA sequencing raw reads from post-mortem s. (brain)		SRR330891(SRX091729)
tissue: skin psoriatic uninvolveddisease stat. (skin)		SRR033724(GSM497069)
L428 cell line (L428). (B cell)		SRR189782SRR189779(GSM714639)
cell line: HEK293clip variant: PAR-CLIPenzyma. (cell line)		SRR330901(SRX091739)
tissue: skin psoriatic uninvolveddisease stat. (skin)		SRR033720(GSM497065)
EBV activated B cell line (EBV159). (B cell)		SRR330870(SRX091708)
tissue: skin psoriatic involveddisease state:. (skin)		GSM450600(GSM450600)
miRNA sequencing raw reads from post-mortem s. (brain)		SRR060168(GSM565978)
5-8F_nucleus. (cell line)		SRR342895(SRX096791)
small RNA seq of Left atrial tissue. (heart)		SRR342899(SRX096795)
small RNA seq of Left atrial tissue. (heart)		SRR039616(GSM531979)
HBV(+) Distal Tissue Sample 1. (liver)		SRR039621(GSM531984)
HBV(+) HCC Tissue Sample 2. (liver)		DRR000555(DRX000313)
"THP-1 whole cell RNA, no treatment". (cell line)		SRR039625(GSM531988)
HBV(-) HCV(-) HCC Tissue Sample. (liver)		SRR330906(SRX091744)
tissue: normal skindisease state: normal. (skin)		SRR039190(GSM494809)
PBMCs were isolated by ficoll gradient from t. (blood)		SRR207112(GSM721074)
RRP40 knockdown. (RRP40 cell line)		SRR330863(SRX091701)
tissue: skin psoriatic involveddisease state:. (skin)		SRR039618(GSM531981)
HBV(+) Side Tissue Sample 1. (liver)		SRR330885(SRX091723)
tissue: skin psoriatic uninvolveddisease stat. (skin)		SRR037943(GSM510481)
293DcrTN. (cell line)		GSM450609(GSM450609)
miRNA sequencing raw reads from post-mortem s. (brain)		SRR553573(SRX182779)
source: Cerebellum. (Cerebellum)		DRR000558(DRX000316)
"THP-1 whole cell RNA, after 3 day treatment . (cell line)		SRR037937(GSM510475)
293cand2. (cell line)		SRR015364(GSM380329)
Plasma B cells (PC44). (B cell)		SRR189785SRR038855(GSM458538)
D10. (cell line)		SRR039192(GSM494811)
K562 cell line is derived from a CML patient . (cell line)		SRR330887(SRX091725)
tissue: skin psoriatic uninvolveddisease stat. (skin)		TAX577739(Rovira)
total RNA. (breast)		SRR094132(GSM651908)
small RNA(18-35nt)small RNA deep sequencing o. (uterus)		SRR330917(SRX091755)
tissue: normal skindisease state: normal. (skin)		SRR191523(GSM715633)
107genomic small RNA (size selected RNA from . (breast)		SRR189780(GSM714640)
cell line: HEK293clip variant: PAR-CLIPenzyma. (cell line)		SRR330861(SRX091699)
tissue: skin psoriatic involveddisease state:. (skin)		TAX577742(Rovira)
total RNA. (breast)		SRR390723(GSM850202)
total small RNA. (cell line)		DRR001489(DRX001043)
"Hela short nuclear cell fraction, control". (hela)		SRR033713(GSM497058)
Burkitt Lymphoma (BL115). (B cell)		SRR330862(SRX091700)
tissue: skin psoriatic involveddisease state:. (skin)		SRR207115(GSM721077)
XRN1&2 knockdown. (XRN1/XRN2 cell line)		SRR330868(SRX091706)
tissue: skin psoriatic involveddisease state:. (skin)		SRR553576(SRX182782)
source: Testis. (testes)		SRR330894(SRX091732)
tissue: skin psoriatic uninvolveddisease stat. (skin)		GSM450599(GSM450599)
miRNA sequencing raw reads from post-mortem s. (brain)		TAX577738(Rovira)
total RNA. (breast)		SRR363673(GSM830250)
cell type: human foreskin fibroblasts (HFF)tr. (fibroblast)		SRR342897(SRX096793)
small RNA seq of Left atrial tissue. (heart)		TAX577453(Rovira)
total RNA. (breast)		SRR191455(GSM715565)
181genomic small RNA (size selected RNA from . (breast)		SRR342898(SRX096794)
small RNA seq of Right atrial tissue. (heart)		GSM450597(GSM450597)
miRNA sequencing raw reads from post-mortem s. (brain)		SRR330916(SRX091754)
tissue: normal skindisease state: normal. (skin)		SRR060981(GSM569185)
Human centroblast [09-001]. (cell line)		SRR189781(GSM714641)
cell line: HEK293clip variant: PAR-CLIPenzyma. (cell line)		SRR038852(GSM458535)
QF1160MB. (cell line)		SRR330914(SRX091752)
tissue: normal skindisease state: normal. (skin)		SRR330902(SRX091740)
tissue: skin psoriatic uninvolveddisease stat. (skin)
.........................................................................................TGCGACCTGACCCCTGACACGG....................................................................22132.0032.007.006.007.002.002.00--2.00-2.001.00------------------------------------------------1.00-------------------1.00--------1.00-----
.........................................................................................TGCGACCTGACCCCTGACACGT....................................................................22119.0010.0011.00---5.00-1.00---------1.00-----------------------------------------------------1.00-----------------------
.........................................................................................TGCGACCTGACCCCTGACACGGA...................................................................23117.0032.005.001.00--2.004.001.001.00----------------------1.00----1.00---------------1.00------------------------------------------
.........................................................................................TGCGACCTGACCCCTGACACGTT...................................................................23117.0010.009.00-1.00-1.001.00-----------1.001.00-----1.00-----------------------------1.00-------------1.00-------------------------
.........................................................................................TGCGACCTGACCCCTGACACGGGC..................................................................24116.0016.001.001.001.006.00---1.00--3.00-------------------1.002.00--------------------------------------------------------------
.........................................................................................TGCGACCTGACCCCTGACACG.....................................................................21110.0010.001.00-----4.00-----4.00--------------------------------------------------------------------1.00------------
...................................................................................CGGACCTGCGACCTGACC..............................................................................1819.009.00-1.004.00-------------------------------------1.00---1.00----1.00--------------------------------1.00-----------
.................................CAAGGGACTCTTTGCAG.................................................................................................................................1718.008.00--------7.00--------------------------------------1.00----------------------------------------------
.........................................................................................TGCGACCTGACCCCTGACACGGT...................................................................2318.0032.00-3.00-1.00--1.001.00-------------------1.00----------------------1.00-------------------------------------------
.........................................................................................TGCGACCTGACCCCTGACACGA....................................................................2216.0010.00-1.00---2.00-------------1.00-------------------------------------1.00------------------1.00-----------------
.........................................................................................TGCGACCTGACCCCTGACACGGGA..................................................................2415.005.00---2.00-----------3.00------------------------------------------------------------------------------
.........................................................................................TGCGACCTGACCCCTGACACGGG...................................................................2315.005.00-3.00-2.00------------------------------------------------------------------------------------------
...........................................................................GGGCATGGCGGACCTGCGACCTGACCC.............................................................................2715.005.00-----------5.00----------------------------------------------------------------------------------
...........................................................TGGGTGTCGGGGGTGGGGGCA...................................................................................................2114.004.00-----------------------------2.00---------2.00------------------------------------------------------
.................................................................................GGCGGACCTGCGACCTGAC...............................................................................1914.004.00-------2.00---------------1.00----------------------------------1.00-----------------------------------
.........................................................................................TGCGACCTGACCCCTGACA.......................................................................1914.004.00--1.001.00-------------2.00----------------------------------------------------------------------------
.................GGGCCGAGTCGGGCACCAAG..............................................................................................................................................2013.003.00----------------------1.00----------------------1.001.00-----------------------------------------------
......................................................GTGTGTGGGTGTCGGGGGTGGGGGCA...................................................................................................2613.003.00----------------------------------2.00------------------------------------1.00----------------------
.........................................................................................TGCGACCTGACCCCTGACACGGGT..................................................................2413.005.00-----2.00----------------------------------------------------------1.00-----------------------------
........................................................................................CTGCGACCTGACCCCTGACACGT....................................................................233.000.00---------3.00------------------------------------------------------------------------------------
................................................................................TGGCGGACCTGCGACCTGAC...............................................................................2013.003.00--1.001.00--------------1.00---------------------------------------------------------------------------
................................................................................TGGCGGACCTGCGACCTGACCC.............................................................................2213.003.00--1.00--------------------2.00----------------------------------------------------------------------
.........................................................................................TGCGACCTGACCCCTGACACGTA...................................................................2313.0010.00-1.00-------1.00--------------------------1.00---------------------------------------------------------
................................CCAAGGGACTCTTTGCAGA................................................................................................................................1912.001.00-------------------------2.00--------------------------------------------------------------------
............................................................................................GACCTGACCCCTGACACGTT...................................................................202.000.00-------------------2.00--------------------------------------------------------------------------
...................................AGGGACTCTTTGCAGGCT..............................................................................................................................182.000.00--------------1.00-----1.00-------------------------------------------------------------------------
..........................CGGGCACCAAGGGACTCTTTGCAGGC...............................................................................................................................262.000.00--------------------------------------2.00-------------------------------------------------------
........................................................................................CTGCGACCTGACCCCTGACACGG....................................................................2312.002.00----1.00-1.00---------------------------------------------------------------------------------------
..................................AAGGGACTCTTTGCAGGCTTC............................................................................................................................212.000.00----------------------1.00------------------------------1.00----------------------------------------
......................................................GTGTGTGGGTGTCGGGGGTG.........................................................................................................2012.002.00-------------------------------------------2.00--------------------------------------------------
.........................................................................................TGCGACCTGACCCCTGACACGAAT..................................................................2412.0010.00------------------1.00------------------------------------1.00--------------------------------------
..................................................GTCAGTGTGTGGGTGTCGGGGGTG.........................................................................................................2412.002.00------------------------------------1.00------------------------1.00--------------------------------
..................................................GTCAGTGTGTGGGTGTCGGTA............................................................................................................212.000.00--------------------------2.00-------------------------------------------------------------------
.........................................................................................TGCGACCTGACCCCTGACACGGTT..................................................................2411.0032.00---1.00------------------------------------------------------------------------------------------
.CTGCTGCGGAGGATCCGGG...............................................................................................................................................................1911.001.00----------1.00-----------------------------------------------------------------------------------
...............CCGGGCCGAGTCGGGCACCA................................................................................................................................................2011.001.00-------------------------------------------------------------------------------------------1.00--
.........................................................................................TGCGACCTGACCCCTGACACGTAT..................................................................2411.0010.00------------------------------------------------------------------1.00---------------------------
........................................................GTGTGGGTGTCGGGGGTG.........................................................................................................1811.001.00----------------------------1.00-----------------------------------------------------------------
.......................................................................................................................................TTCCTCGGATCATCAAGGT.........................1911.001.00--------------------------1.00-------------------------------------------------------------------
.........................................................................................TGCGACCTGACCCCTGACACGTCT..................................................................2411.0010.00--------------------------------------------------------------1.00-------------------------------
................CGGGCCGAGTCGGGCACCAAGGGACTCTTCG....................................................................................................................................311.000.00------------------------------------------------------------------------------------------1.00---
.......CGGAGGATCCGGGCCGAGTCGGGCAC..................................................................................................................................................2611.001.00------------------------------------------1.00---------------------------------------------------
.................................CAAGGGACTCTTTGCAGAA...............................................................................................................................1911.008.00------------------------------------------------------------1.00---------------------------------
........................................................................................CTGCGACCTGACCCCTGAAA.......................................................................201.000.00-----------------------------------1.00----------------------------------------------------------
..........................................................................................GCGACCTGACCCCTGACAAA.....................................................................201.000.001.00---------------------------------------------------------------------------------------------
.....TGCGGAGGATCCGGGCCGAGTCGGGC....................................................................................................................................................2611.001.00---------------------------------------------------------------1.00------------------------------
..............TCCGGGCCGAGTCGGGCACCAAGGGAC..........................................................................................................................................2711.001.00-1.00--------------------------------------------------------------------------------------------
.........................................................................................TGCGACCTGACCCCTGACACCGGC..................................................................2411.001.00---1.00------------------------------------------------------------------------------------------
..........................................................................................................................................CTCGGATCATCAAGGCTGC......................1911.001.00----------------------------------------1.00-----------------------------------------------------
........................GTCGGGCACCAAGGGACTCTTTGCAG.................................................................................................................................2611.001.00------------------------1.00---------------------------------------------------------------------
............................................................................GGCATGGCGGACCTGCGACCTGACCC.............................................................................2611.001.00----------------------------1.00-----------------------------------------------------------------
................CGGGCCGAGTCGGGCACCAA...............................................................................................................................................2011.001.00--------------1.00-------------------------------------------------------------------------------
.......................AGTCGGGCACCAAGGGAC..........................................................................................................................................1811.001.00---------------------1.00------------------------------------------------------------------------
...........................GGGCACCAAGGGACTCTTTGCAGGCT..............................................................................................................................2611.001.00-1.00--------------------------------------------------------------------------------------------
.................................................................................................................................................CATCAAGGCTGCCCCCTCC...............1911.001.00-------------------------------------------------------------------------------------1.00--------
.........................................................................................TGCGACCTGACCCCTGACACGGCA..................................................................2411.0032.00---1.00------------------------------------------------------------------------------------------
.........................................................................................TGCGACCTGACCCCTGACACGTTT..................................................................2411.0010.00-----------------------------------------------------------------1.00----------------------------
.........................................................................................TGCGACCTGACCCCTGACCGG.....................................................................211.000.00-1.00--------------------------------------------------------------------------------------------
...........................GGGCACCAAGGGACTCTTTGCAGGCTTC............................................................................................................................2811.001.00----------------------1.00-----------------------------------------------------------------------
.........................................................................................TGCGACCTGACCCCTGACACAAA...................................................................2311.001.00------------------------------------------------1.00---------------------------------------------
......GCGGAGGATCCGGGCCGAGTCGGGCACC.................................................................................................................................................2811.001.00--------------------------------------------------------------------------------------1.00-------
.........................................................................................TGCGACCTGACCCCTGACACGGTA..................................................................2411.0032.00---------------------------1.00------------------------------------------------------------------
.........GAGGATCCGGGCCGAGTC........................................................................................................................................................1811.001.00---------------------1.00------------------------------------------------------------------------
...................................AGGGACTCTTTGCAGGCTT.............................................................................................................................191.000.00--------------------1.00-------------------------------------------------------------------------
...................GCCGAGTCGGGCACCAAGG.............................................................................................................................................1911.001.00--------------1.00-------------------------------------------------------------------------------
...........................GGGCACCAAGGGACTCTTTGCAGG................................................................................................................................2411.001.00----------1.00-----------------------------------------------------------------------------------
....................................................................................GGACCTGCGACCTGACC..............................................................................1711.001.00-1.00--------------------------------------------------------------------------------------------
.........................................................................................TGCGACCTGACCCCTGACATGTC...................................................................2311.004.00--1.00-------------------------------------------------------------------------------------------
.........................................................................................................................................CCTCGGATCATCAAGGCTGC......................2011.001.00------------------------1.00---------------------------------------------------------------------
..........AGGATCCGGGCCGAGTCGGGCA...................................................................................................................................................2211.001.00------------------------------------------1.00---------------------------------------------------
...................GCCGAGTCGGGCACCCCCG.............................................................................................................................................191.000.00------------------------------------------------------------------------------------1.00---------
.........GAGGATCCGGGCCGAGTCGGGCACC.................................................................................................................................................2511.001.00--------------------------------------------------------------------------------1.00-------------
.................GGGCCGAGTCGGGCACCAAGGGACT.........................................................................................................................................2511.001.00---------------------------------------------------------------------------1.00------------------
.........................TCGGGCACCAAGGGACTC........................................................................................................................................1811.001.00--1.00-------------------------------------------------------------------------------------------
.........................................................................................TGCGACCTGACCCCTGACACAAT...................................................................2311.001.00------------------------------------------------------------------------1.00---------------------
.......CGGAGGATCCGGGCCGAGTCGGGCACCAAGGG............................................................................................................................................3211.001.00--------------------------------1.00-------------------------------------------------------------
...................................AGGGACTCTTTGCAGGCTTC............................................................................................................................201.000.00--------------1.00-------------------------------------------------------------------------------
.........................TCGGGCACCAAGGGACTCTTTGCAGGC...............................................................................................................................271.000.00------------------------------------------------------------------------------1.00---------------
........................................CTCTTTGCAGGTCAGTGT.........................................................................................................................1811.001.00----------------------------------------------------1.00-----------------------------------------
...........................................................................GGGCATGGCGGACCTGCGACCTGAC...............................................................................2511.001.00-------1.00--------------------------------------------------------------------------------------
........................GTCGGGCACCAAGGGACTCTTTGCAGGCTTC............................................................................................................................311.000.00--------------------------------1.00-------------------------------------------------------------
..........................CGGGCACCAAGGGAC..........................................................................................................................................1511.001.00-1.00--------------------------------------------------------------------------------------------
.........................................................................................TGCGACCTGACCCCTGACACAGT...................................................................2311.001.00----1.00-----------------------------------------------------------------------------------------
.................................CAAGGGACTCTTTGCAGG................................................................................................................................1811.001.00-------------------------------------------------------------------1.00--------------------------
........................................................................................................................................TCCTCGGATCATCAAGGCT........................1911.001.00---------------------1.00------------------------------------------------------------------------
........................................................................................................................................TCCTCGGATCATCAAGGCTTA......................2111.001.00-------------------------1.00--------------------------------------------------------------------
..................................AAGGGACTCTTTGCAGGC...............................................................................................................................181.000.00-----------------------------------------------------------------------------------1.00----------
.......................................................................................................................................TTCCTCGGATCATCAAGG..........................1811.001.00--------------------1.00-------------------------------------------------------------------------
.........................................................................................TGCGACCTGACCCCTGACACGTC...................................................................2311.0010.00---------1.00------------------------------------------------------------------------------------
.........................................................................................TGCGACCTGACCCCTGACACGCT...................................................................2311.0010.00----------------1.00-----------------------------------------------------------------------------
............................................................................GGCATGGCGGACCTGCGAC....................................................................................1911.001.00-----------------------------------------------------------------------------------------1.00----
.........................................................................................TGCGACCTGACCCCTGACAC......................................................................2011.001.00-1.00--------------------------------------------------------------------------------------------
.........................................................................................TGCGACCTGACCCCTGACACGAAA..................................................................2411.0010.00-----1.00----------------------------------------------------------------------------------------
.................................................................................GGCGGACCTGCGACCTGA................................................................................1811.001.00-----------------------------------------------------------------------------1.00----------------
.............ATCCGGGCCGAGTCGGGCAC..................................................................................................................................................2011.001.00-------------------------------------------------------------------------1.00--------------------
................................CCAAGGGACTCTTTGCAG.................................................................................................................................1811.001.00--------------------------------------------------------------------------1.00-------------------
.........................TCGGGCACCAAGGGA...........................................................................................................................................1520.500.50-0.50--------------------------------------------------------------------------------------------
..............................................................................................................................CAGGCTTCCTTCCTCGG....................................1730.330.33-0.33--------------------------------------------------------------------------------------------
..............................................................GTGTCGGGGGTGGGGGCA...................................................................................................1850.200.20---------------------------0.20------------------------------------------------------------------

Antisense strand
GCTGCTGCGGAGGATCCGGGCCGAGTCGGGCACCAAGGGACTCTTTGCAGGTCAGTGTGTGGGTGTCGGGGGTGGGGGCATGGCGGACCTGCGACCTGACCCCTGACACGGGCCTCCTTTCCACTGCAGGCTTCCTTCCTCGGATCATCAAGGCTGCCCCCTCCTGTGCCATCATGATC
..........................................................((..(((((((((((.((((((.((....)))))..))).)))))))))))..))..................................................................
..................................................51..............................................................115..............................................................
SizePerfect hitTotal NormPerfect NormSRR207113(GSM721075)
IP against AGO 1 & 2. (ago1/2 cell line)		SRR326279(GSM769509)
cytoplasmic fraction was isolated using PARIS. (cell line)		SRR326282(GSM769512)
"Dicer mRNA was knocked down using siDicer, t. (cell line)		SRR326280(GSM769510)
total cell content of unperturbed cells was s. (cell line)		GSM1105749AGO2(GSM1105749)
small RNA sequencing data. (ago2 hela)		SRR387910(GSM843862)
antibody for ip: Ago2. (ago2 cell line)		SRR207114(GSM721076)
"IP against AGO 1 & 2, RRP40 knockdown". (ago1/2 RRP40 cell line)		SRR326281(GSM769511)
"Dicer mRNA was knocked down using siDicer, c. (cell line)		SRR207110(GSM721072)
Nuclear RNA. (cell line)		GSM1105750AGO3(GSM1105750)
small RNA sequencing data. (ago3 hela)		RoviraIPAgo2(Rovira)
total RNA. (ago2 breast)		SRR037935(GSM510473)
293cand3. (cell line)		SRR037936(GSM510474)
293cand1. (cell line)		GSM450608(GSM450608)
miRNA sequencing raw reads from post-mortem s. (brain)		SRR039623(GSM531986)
HCV(+) HCC Tissue Sample. (liver)		SRR037942(GSM510480)
293DroshaTN_cand5. (cell line)		SRR189784GSM1105748AGO1(GSM1105748)
small RNA sequencing data. (ago1 hela)		SRR343332(GSM796035)
"KSHV (HHV8), EBV (HHV-4)". (cell line)		GSM1105753INPUT(GSM1105753)
small RNA sequencing data. (hela)		SRR033721(GSM497066)
Ly3 cell line (Ly3). (B cell)		SRR033727(GSM497072)
HIV-positive DL (HIV412). (B cell)		SRR039622(GSM531985)
HCV(+) Adjacent Tissue Sample. (liver)		GSM541796(GSM541796)
undifferentiated human embryonic stem cells. (cell line)		SRR207116(GSM721078)
Nuclear RNA. (cell line)		SRR033723(GSM497068)
L1236 cell line (L1236). (B cell)		SRR033711(GSM497056)
GCB DLBCL (GCB110). (B cell)		SRR033722(GSM497067)
KMS12 cell line (KMS12). (B cell)		SRR330872(SRX091710)
tissue: skin psoriatic involveddisease state:. (skin)		SRR033719(GSM497064)
6hr Activated B cell line (ABC158). (B cell)		SRR191598(GSM715708)
79genomic small RNA (size selected RNA from t. (breast)		SRR330888(SRX091726)
tissue: skin psoriatic uninvolveddisease stat. (skin)		SRR553572(SRX182778)
source: Frontal Cortex. (Frontal Cortex)		GSM450604(GSM450604)
miRNA sequencing raw reads from post-mortem s. (brain)		SRR330891(SRX091729)
tissue: skin psoriatic uninvolveddisease stat. (skin)		SRR033724(GSM497069)
L428 cell line (L428). (B cell)		SRR189782SRR189779(GSM714639)
cell line: HEK293clip variant: PAR-CLIPenzyma. (cell line)		SRR330901(SRX091739)
tissue: skin psoriatic uninvolveddisease stat. (skin)		SRR033720(GSM497065)
EBV activated B cell line (EBV159). (B cell)		SRR330870(SRX091708)
tissue: skin psoriatic involveddisease state:. (skin)		GSM450600(GSM450600)
miRNA sequencing raw reads from post-mortem s. (brain)		SRR060168(GSM565978)
5-8F_nucleus. (cell line)		SRR342895(SRX096791)
small RNA seq of Left atrial tissue. (heart)		SRR342899(SRX096795)
small RNA seq of Left atrial tissue. (heart)		SRR039616(GSM531979)
HBV(+) Distal Tissue Sample 1. (liver)		SRR039621(GSM531984)
HBV(+) HCC Tissue Sample 2. (liver)		DRR000555(DRX000313)
"THP-1 whole cell RNA, no treatment". (cell line)		SRR039625(GSM531988)
HBV(-) HCV(-) HCC Tissue Sample. (liver)		SRR330906(SRX091744)
tissue: normal skindisease state: normal. (skin)		SRR039190(GSM494809)
PBMCs were isolated by ficoll gradient from t. (blood)		SRR207112(GSM721074)
RRP40 knockdown. (RRP40 cell line)		SRR330863(SRX091701)
tissue: skin psoriatic involveddisease state:. (skin)		SRR039618(GSM531981)
HBV(+) Side Tissue Sample 1. (liver)		SRR330885(SRX091723)
tissue: skin psoriatic uninvolveddisease stat. (skin)		SRR037943(GSM510481)
293DcrTN. (cell line)		GSM450609(GSM450609)
miRNA sequencing raw reads from post-mortem s. (brain)		SRR553573(SRX182779)
source: Cerebellum. (Cerebellum)		DRR000558(DRX000316)
"THP-1 whole cell RNA, after 3 day treatment . (cell line)		SRR037937(GSM510475)
293cand2. (cell line)		SRR015364(GSM380329)
Plasma B cells (PC44). (B cell)		SRR189785SRR038855(GSM458538)
D10. (cell line)		SRR039192(GSM494811)
K562 cell line is derived from a CML patient . (cell line)		SRR330887(SRX091725)
tissue: skin psoriatic uninvolveddisease stat. (skin)		TAX577739(Rovira)
total RNA. (breast)		SRR094132(GSM651908)
small RNA(18-35nt)small RNA deep sequencing o. (uterus)		SRR330917(SRX091755)
tissue: normal skindisease state: normal. (skin)		SRR191523(GSM715633)
107genomic small RNA (size selected RNA from . (breast)		SRR189780(GSM714640)
cell line: HEK293clip variant: PAR-CLIPenzyma. (cell line)		SRR330861(SRX091699)
tissue: skin psoriatic involveddisease state:. (skin)		TAX577742(Rovira)
total RNA. (breast)		SRR390723(GSM850202)
total small RNA. (cell line)		DRR001489(DRX001043)
"Hela short nuclear cell fraction, control". (hela)		SRR033713(GSM497058)
Burkitt Lymphoma (BL115). (B cell)		SRR330862(SRX091700)
tissue: skin psoriatic involveddisease state:. (skin)		SRR207115(GSM721077)
XRN1&2 knockdown. (XRN1/XRN2 cell line)		SRR330868(SRX091706)
tissue: skin psoriatic involveddisease state:. (skin)		SRR553576(SRX182782)
source: Testis. (testes)		SRR330894(SRX091732)
tissue: skin psoriatic uninvolveddisease stat. (skin)		GSM450599(GSM450599)
miRNA sequencing raw reads from post-mortem s. (brain)		TAX577738(Rovira)
total RNA. (breast)		SRR363673(GSM830250)
cell type: human foreskin fibroblasts (HFF)tr. (fibroblast)		SRR342897(SRX096793)
small RNA seq of Left atrial tissue. (heart)		TAX577453(Rovira)
total RNA. (breast)		SRR191455(GSM715565)
181genomic small RNA (size selected RNA from . (breast)		SRR342898(SRX096794)
small RNA seq of Right atrial tissue. (heart)		GSM450597(GSM450597)
miRNA sequencing raw reads from post-mortem s. (brain)		SRR330916(SRX091754)
tissue: normal skindisease state: normal. (skin)		SRR060981(GSM569185)
Human centroblast [09-001]. (cell line)		SRR189781(GSM714641)
cell line: HEK293clip variant: PAR-CLIPenzyma. (cell line)		SRR038852(GSM458535)
QF1160MB. (cell line)		SRR330914(SRX091752)
tissue: normal skindisease state: normal. (skin)		SRR330902(SRX091740)
tissue: skin psoriatic uninvolveddisease stat. (skin)
............................................................................................................................................................CCCCCTCCTGTGCCAAAT..... 185.000.00-------------3.00------------------------------------------1.00------------------------------1.00------
............................................................................................................................................................CCCCCTCCTGTGCCATAT..... 182.000.00---------------------------------1.00-------1.00----------------------------------------------------
.........GAGGATCCGGGCCGAGT......................................................................................................................................................... 172.000.00-------------------------------------2.00--------------------------------------------------------
............................................................................................................................................................CCCCCTCCTGTGCCATATT.... 191.000.00---------------------------------1.00------------------------------------------------------------
...........................................................TGGGTGTCGGGGGTGGGGG..................................................................................................... 191.000.00----------------1.00-----------------------------------------------------------------------------
............................................................................................................................................................CCCCCTCCTGTGCCAAACT.... 191.000.00-----------------------------------------1.00----------------------------------------------------
............................................................................................................................................................CCCCCTCCTGTGCCAAAC..... 181.000.00-------------1.00--------------------------------------------------------------------------------
..................................................................................................................................................ATCAAGGCTGCCCCCTTG............... 181.000.00---------------------------------------------------------------------1.00------------------------
...............................................................................................................TGCAGTGGAAAGGAGGC................................................... 1720.500.50--------------------------------------------------------------------------------------------0.50-
.................................................................................................CCCGTGTCAGGGGTC................................................................... 1530.330.33---------------------------------------------------------------------------------------------0.33