ID: uc002ifm.1_intron_2_0_chr17_42254309_f.5p
GENE: ASB16(3)
chr17:42254259-42254508+


(1)
B-CELL
(1)
BREAST
(3)
CELL-LINE
(4)
CERVIX
(2)
HEART
(2)
HELA
(1)
KIDNEY
(3)
LIVER
(3)
OTHER
(6)
SKIN
(1)
TESTES

Sense strand
CCAGGGCGAGACTGCGCTGAACACGGCGTGCGCTGGGGCCGAGGGCCCAGGTAGCTGCAGGCGACACCAGGCTGCGGCGCGCCGGCTCCTGGAGGCTGGAGCTGATGCCCGGGCGGCCGGGCGCAAGCGCCACACGCCGCTGCACAACGCTTGTGCCAACGGCTGCGGGGGCCTGGCCGAGCTGCTGCTGCGTTACGGGGCCCGCGCTGAGGTCCCCAATGGGGCGGGCCACACGCCCATGGACTGTGCG
..........................................................................................................((((..(((((((((((((((((......((....))....))))))))))..)))))))..))))..............................................................................
.....................................................................................................102.............................................................................182..................................................................
SizePerfect hitTotal NormPerfect NormSRR326279(GSM769509)
cytoplasmic fraction was isolated using PARIS. (cell line)
SRR326281(GSM769511)
"Dicer mRNA was knocked down using siDicer, c. (cell line)
SRR330895(SRX091733)
tissue: skin psoriatic uninvolveddisease stat. (skin)
SRR189780(GSM714640)
cell line: HEK293clip variant: PAR-CLIPenzyma. (cell line)
DRR001489(DRX001043)
"Hela short nuclear cell fraction, control". (hela)
SRR039622(GSM531985)
HCV(+) Adjacent Tissue Sample. (liver)
SRR039623(GSM531986)
HCV(+) HCC Tissue Sample. (liver)
DRR001488(DRX001042)
"Hela short nuclear cell fraction, LNA(+)". (hela)
SRR189784SRR040029(GSM532914)
G026T. (cervix)
SRR553575(SRX182781)
source: Kidney. (Kidney)
SRR040037(GSM532922)
G243T. (cervix)
SRR189782SRR191621(GSM715731)
16genomic small RNA (size selected RNA from t. (breast)
SRR039617(GSM531980)
HBV(+) Adjacent Tissue Sample 1. (liver)
SRR189785SRR040008(GSM532893)
G727N. (cervix)
SRR330884(SRX091722)
tissue: skin psoriatic uninvolveddisease stat. (skin)
SRR330899(SRX091737)
tissue: skin psoriatic uninvolveddisease stat. (skin)
SRR040014(GSM532899)
G623N. (cervix)
SRR342900(SRX096796)
small RNA seq of Right atrial tissue. (heart)
SRR444060(SRX128908)
Sample 18cDNABarcode: AF-PP-340: ACG CTC TTC . (skin)
SRR553576(SRX182782)
source: Testis. (testes)
SRR342897(SRX096793)
small RNA seq of Left atrial tissue. (heart)
SRR033711(GSM497056)
GCB DLBCL (GCB110). (B cell)
SRR330883(SRX091721)
tissue: skin psoriatic uninvolveddisease stat. (skin)
SRR330906(SRX091744)
tissue: normal skindisease state: normal. (skin)
..........................................................................................................GCCCGGGCGGCCGGGCG...............................................................................................................................17140.0040.0026.0014.00-------------------------
..............................................................................................................................................................ACGGCTGCGGGGGCCTCAGG........................................................................202.000.00---2.00-----------------------
..........................................................................................................GCCCGGGCGGCCGGGCGCG.............................................................................................................................192.000.001.001.00-------------------------
..........................................................................................................GCCCGGGCGGCCGGGC................................................................................................................................1631.001.000.330.67-------------------------
....................................................................AGGCTGCGGCGCGCCGAGA...................................................................................................................................................................191.000.00-------------1.00-------------
......................................................................................................................................................................GGGGGCCTGGCCGAGCCGTG................................................................201.000.00--------1.00------------------
................CTGAACACGGCGTGCGCTGGGGC...................................................................................................................................................................................................................2311.001.00-----------------------1.00---
.........................................................................................TGGAGGCTGGAGCTGATGCCCGGGC........................................................................................................................................2511.001.00----------------------1.00----
..........................................................................CGGCGCGCCGGCTCCGGG..............................................................................................................................................................181.000.00---------1.00-----------------
.........................................................................GCGGCGCGCCGGCTCCCCCG.............................................................................................................................................................201.000.00-----------------1.00---------
..............................................................GACACCAGGCTGCGGCGCGCCGGC....................................................................................................................................................................2411.001.00------------------1.00--------
...........................................................................GGCGCGCCGGCTCCTCCTC............................................................................................................................................................191.000.00---------------------1.00-----
......................................CCGAGGGCCCAGGTAGGGGT................................................................................................................................................................................................201.000.00-------1.00-------------------
.....................................................................GGCTGCGGCGCGCCGTGG...................................................................................................................................................................181.000.00------------------------1.00--
....GGCGAGACTGCGCTGAACACGGCGTGCG..........................................................................................................................................................................................................................2811.001.00--------------------1.00------
..................................................................................CGGCTCCTGGAGGCTTA.......................................................................................................................................................171.000.00----------1.00----------------
..........................................................................................................GCCCGGGCGGCCGGGCGCC.............................................................................................................................191.000.00---------------1.00-----------
...................................................................................................................GCCGGGCGCAAGCGCC.......................................................................................................................1620.500.50-------------------------0.50-
.......................................................................................CCTGGAGGCTGGAGCTG..................................................................................................................................................1760.170.17--------------------------0.17

Antisense strand
CCAGGGCGAGACTGCGCTGAACACGGCGTGCGCTGGGGCCGAGGGCCCAGGTAGCTGCAGGCGACACCAGGCTGCGGCGCGCCGGCTCCTGGAGGCTGGAGCTGATGCCCGGGCGGCCGGGCGCAAGCGCCACACGCCGCTGCACAACGCTTGTGCCAACGGCTGCGGGGGCCTGGCCGAGCTGCTGCTGCGTTACGGGGCCCGCGCTGAGGTCCCCAATGGGGCGGGCCACACGCCCATGGACTGTGCG
..........................................................................................................((((..(((((((((((((((((......((....))....))))))))))..)))))))..))))..............................................................................
.....................................................................................................102.............................................................................182..................................................................
SizePerfect hitTotal NormPerfect NormSRR326279(GSM769509)
cytoplasmic fraction was isolated using PARIS. (cell line)
SRR326281(GSM769511)
"Dicer mRNA was knocked down using siDicer, c. (cell line)
SRR330895(SRX091733)
tissue: skin psoriatic uninvolveddisease stat. (skin)
SRR189780(GSM714640)
cell line: HEK293clip variant: PAR-CLIPenzyma. (cell line)
DRR001489(DRX001043)
"Hela short nuclear cell fraction, control". (hela)
SRR039622(GSM531985)
HCV(+) Adjacent Tissue Sample. (liver)
SRR039623(GSM531986)
HCV(+) HCC Tissue Sample. (liver)
DRR001488(DRX001042)
"Hela short nuclear cell fraction, LNA(+)". (hela)
SRR189784SRR040029(GSM532914)
G026T. (cervix)
SRR553575(SRX182781)
source: Kidney. (Kidney)
SRR040037(GSM532922)
G243T. (cervix)
SRR189782SRR191621(GSM715731)
16genomic small RNA (size selected RNA from t. (breast)
SRR039617(GSM531980)
HBV(+) Adjacent Tissue Sample 1. (liver)
SRR189785SRR040008(GSM532893)
G727N. (cervix)
SRR330884(SRX091722)
tissue: skin psoriatic uninvolveddisease stat. (skin)
SRR330899(SRX091737)
tissue: skin psoriatic uninvolveddisease stat. (skin)
SRR040014(GSM532899)
G623N. (cervix)
SRR342900(SRX096796)
small RNA seq of Right atrial tissue. (heart)
SRR444060(SRX128908)
Sample 18cDNABarcode: AF-PP-340: ACG CTC TTC . (skin)
SRR553576(SRX182782)
source: Testis. (testes)
SRR342897(SRX096793)
small RNA seq of Left atrial tissue. (heart)
SRR033711(GSM497056)
GCB DLBCL (GCB110). (B cell)
SRR330883(SRX091721)
tissue: skin psoriatic uninvolveddisease stat. (skin)
SRR330906(SRX091744)
tissue: normal skindisease state: normal. (skin)
..........................................................................................................GCCCGGGCGGCCGGGCGGGA............................................................................................................................ 2013.000.001.002.00-------------------------
..........................................................................................................GCCCGGGCGGCCGGGCG............................................................................................................................... 1733.000.002.001.00-------------------------
..........................................................................................................GCCCGGGCGGCCGGGCGGG............................................................................................................................. 1913.000.002.001.00-------------------------
..........................................................................CCAGGAGCCGGCGCGCCG.............................................................................................................................................................. 1813.003.00--3.00------------------------
................................................................................................................................................................CGGCCAGGCCCCCGCAGCC....................................................................... 1912.002.00-----2.00---------------------
...........................................................................................................GCGCCCGGCCGCCCGGG.............................................................................................................................. 1712.002.001.001.00-------------------------
.............................................................................AGCCTCCAGGAGCCGGCGCG......................................................................................................................................................... 2011.001.00--------------1.00------------
...........................................................................................................CCCGGGCGGCCGGGCGCC............................................................................................................................. 181.000.001.00--------------------------
.........................................................................................................................................................................................................CCGCGCTGAGGTCCCCTCGA............................. 201.000.00-----------1.00---------------
............................TGCGCTGGGGCCGAGGA............................................................................................................................................................................................................. 171.000.00----1.00----------------------
..................................................................................................................................AGCGTTGTGCAGCGGCGTGTG................................................................................................... 2111.001.00------1.00--------------------
...................................................................................................................................................................................................................................GTCCATGGGCGTGTGGC...... 1711.001.00----1.00----------------------
.........................................................................TCCAGGAGCCGGCGCGCCGC............................................................................................................................................................. 2011.001.00----------------1.00----------
...........................................................................................................CCCGGGCGGCCGGGCGCGCCG.......................................................................................................................... 211.000.001.00--------------------------
...........................................................................................................CCCGGGCGGCCGGGCGCGCG........................................................................................................................... 201.000.001.00--------------------------
...........................................................................................................CCCGGGCGGCCGGGCGCGG............................................................................................................................ 191.000.00-1.00-------------------------
.................................................................................................................................................AACGCTTGTGCCAACCGTG...................................................................................... 191.000.00------------1.00--------------
.........................................................................................................TGCCCGGGCGGCCGGCCCT.............................................................................................................................. 191.000.00-------------------1.00-------
...........................................................................................GAGGCTGGAGCTGATGCAG............................................................................................................................................ 191.000.00------1.00--------------------