ID: uc002idi.1_intron_2_0_chr17_41311745_r.3p
GENE: AK093551(1)
chr17:41311695-41311944-


(1)
AGO1.ip
(1)
AGO2.ip
(1)
B-CELL
(5)
BRAIN
(3)
BREAST
(18)
CELL-LINE
(1)
CERVIX
(2)
HEART
(1)
HELA
(2)
LIVER
(2)
OTHER
(1)
RRP40.ip
(6)
SKIN
(1)
TESTES
(1)
UTERUS
(1)
XRN.ip

Sense strand
ACTCTTGGAGTGAGCCTTTGTTTTTCTTCATTTATAAAAGGAAAAGGGGACTGTACTGTTCACATTTATTTATTTTTTTATTTTTTTAATTGATCATTCTTGGGTGTTTCTCCCAGAGGGGGATTTGGCAGGGTCATAGGACAATAGTGGAGGGAAGGTCAGCAGATAAACAAGTGAACAAAGGTCTCTGGTTTTCCTAGGCAGAGGACCCTGCGGCCTTCCGCAGTGTTTGTGTCCCTGGGTACTTGAG
.......................................................((.(((((............................((((.((((((((.......)))).)))).)))).......(((....)))....))))).))................................................................................................
..................................................51.......................................................................................................156............................................................................................
SizePerfect hitTotal NormPerfect NormSRR189777(GSM714637)
cell line: HEK293clip variant: PAR-CLIPenzyma. (cell line)
SRR189775(GSM714635)
cell line: HEK293clip variant: CLIPenzymatic . (cell line)
SRR189776(GSM714636)
cell line: HEK293clip variant: CLIPenzymatic . (cell line)
SRR189780(GSM714640)
cell line: HEK293clip variant: PAR-CLIPenzyma. (cell line)
SRR189779(GSM714639)
cell line: HEK293clip variant: PAR-CLIPenzyma. (cell line)
SRR189778(GSM714638)
cell line: HEK293clip variant: PAR-CLIPenzyma. (cell line)
DRR000555(DRX000313)
"THP-1 whole cell RNA, no treatment". (cell line)
SRR553576(SRX182782)
source: Testis. (testes)
DRR000556(DRX000314)
"THP-1 whole cell RNA, after 3 day treatment . (cell line)
SRR039622(GSM531985)
HCV(+) Adjacent Tissue Sample. (liver)
DRR000558(DRX000316)
"THP-1 whole cell RNA, after 3 day treatment . (cell line)
DRR000559(DRX000317)
"THP-1 whole cell RNA, no treatment". (cell line)
SRR189781(GSM714641)
cell line: HEK293clip variant: PAR-CLIPenzyma. (cell line)
DRR000557(DRX000315)
"THP-1 whole cell RNA, after 3 day treatment . (cell line)
SRR553572(SRX182778)
source: Frontal Cortex. (Frontal Cortex)
SRR342894(SRX096790)
small RNA seq of Right atrial tissue. (heart)
SRR330901(SRX091739)
tissue: skin psoriatic uninvolveddisease stat. (skin)
SRR207115(GSM721077)
XRN1&2 knockdown. (XRN1/XRN2 cell line)
SRR039623(GSM531986)
HCV(+) HCC Tissue Sample. (liver)
RoviraIPAgo2(Rovira)
total RNA. (ago2 breast)
SRR330889(SRX091727)
tissue: skin psoriatic uninvolveddisease stat. (skin)
SRR189784GSM1105748AGO1(GSM1105748)
small RNA sequencing data. (ago1 hela)
SRR037936(GSM510474)
293cand1. (cell line)
SRR015359(GSM380324)
Germinal Center B cell (GC136). (B cell)
SRR191613(GSM715723)
66genomic small RNA (size selected RNA from t. (breast)
SRR094130(GSM651906)
small RNA(18-35nt)small RNA deep sequencing o. (uterus)
GSM450601(GSM450601)
miRNA sequencing raw reads from post-mortem s. (brain)
SRR207112(GSM721074)
RRP40 knockdown. (RRP40 cell line)
SRR553573(SRX182779)
source: Cerebellum. (Cerebellum)
TAX577740(Rovira)
total RNA. (breast)
SRR189785SRR330897(SRX091735)
tissue: skin psoriatic uninvolveddisease stat. (skin)
SRR095854(SRX039177)
"miRNA were isolated from FirstChoice Human B. (brain)
SRR330887(SRX091725)
tissue: skin psoriatic uninvolveddisease stat. (skin)
SRR330917(SRX091755)
tissue: normal skindisease state: normal. (skin)
SRR390723(GSM850202)
total small RNA. (cell line)
SRR330894(SRX091732)
tissue: skin psoriatic uninvolveddisease stat. (skin)
GSM450602(GSM450602)
miRNA sequencing raw reads from post-mortem s. (brain)
SRR038863(GSM458546)
MM603. (cell line)
GSM450599(GSM450599)
miRNA sequencing raw reads from post-mortem s. (brain)
SRR040043(GSM532928)
G428T. (cervix)
GSM450605(GSM450605)
miRNA sequencing raw reads from post-mortem s. (brain)
SRR342898(SRX096794)
small RNA seq of Right atrial tissue. (heart)
GSM956925Paz8D5(GSM956925)
"cell line: HEK293 cell linepassages: 15-20ip. (cell line)
..........................................................TTCACATTTATTTATTTTTTTATTTTTTTAATTG..............................................................................................................................................................34160.0060.0023.0017.0013.00--7.00---------------------------------------
...........................................................TCACATTTATTTATTTTTTTATTTTTTTAATTG..............................................................................................................................................................33160.0060.0013.0023.0021.00--3.00---------------------------------------
............................................................CACATTTATTTATTTTTTTATTTTTTTAATTG..............................................................................................................................................................32120.0020.007.0011.001.00--1.00---------------------------------------
...........................................................TCACATTTATTTATTTTTTTATTTTTTTAACTG..............................................................................................................................................................3311.000.007.00----4.00---------------------------------------
..........................................................TTCACATTTATTTATTTTTTTATTTTTTTAACTG..............................................................................................................................................................345.000.004.00----1.00---------------------------------------
..........................................................TTCACATTTATTTATTTTTTTATTTTTTTAATT...............................................................................................................................................................3314.004.001.00-3.00------------------------------------------
.....................................................TACTGTTCACATTTATTTATTT...............................................................................................................................................................................2214.004.00-----1.00------3.00--------------------------------
.....................................................................TTATTTTTTTATTTTTTTAACAG..............................................................................................................................................................234.000.00-4.00-------------------------------------------
..............................................................CATTTATTTATTTTTTTATTTTTTTAATTG..............................................................................................................................................................3014.004.001.001.001.00--1.00---------------------------------------
.................................................................TTATTTATTTTTTTATTTTTTTCCAG...............................................................................................................................................................263.000.001.001.001.00------------------------------------------
............................................................CACATTTATTTATTTTTAG...........................................................................................................................................................................193.000.002.001.00-------------------------------------------
...................................................................................................................................................TGGAGGGAAGGTCAGCAGATAAACAAGCGA.........................................................................303.000.00---1.002.00----------------------------------------
.................................................................TTATTTATTTTTTTATTTTTTTCGAG...............................................................................................................................................................263.000.00---3.00-----------------------------------------
...................................................................................................................................................................................................................................GTTTGTGTCCCTGGGTACTCTG.223.000.00---------------1.00----------------1.00-1.00----------
..............................................................CATTTATTTATTTTTTTATTTATTG...................................................................................................................................................................252.000.00--1.00--1.00---------------------------------------
...........................................................TCACATTTATTTATTTTTTTATTTTTTTAATT...............................................................................................................................................................3212.002.00-2.00-------------------------------------------
...........................................................TCACATTTATTTATTTTTTTATTTTTTAATT................................................................................................................................................................312.000.00-2.00-------------------------------------------
.........................................................................................................................................AGGACAATAGTGGAGGGA...............................................................................................1802.002.00------2.00--------------------------------------
.................................................................................................................................................................................................TTCCTAGGCAGAGGACCCTGCGGCCGCAG............................292.000.00---2.00-----------------------------------------
...............................................................................................................................................................................................TTTTCCTAGGCAGAGGACCCTGCGGCCCAC.............................302.000.00---2.00-----------------------------------------
..............................................................................................................................................................................TGAACAAAGGTCTCTGGTTCCC......................................................222.000.00---2.00-----------------------------------------
............................................................CACATTTATTTATTTTTTTATTTTTTTAACTG..............................................................................................................................................................3212.001.002.00--------------------------------------------
.............................................................ACATTTATTTATTTTTTTATTTTTG....................................................................................................................................................................252.000.00-2.00-------------------------------------------
........................................................................................................................................................................AACAAGTGAACAAAGGTCTCTGGTCCTC......................................................282.000.00----2.00----------------------------------------
................................................................TTTATTTATTTTTTTATTTTTTTCCAG...............................................................................................................................................................272.000.00--2.00------------------------------------------
............................................................CACATTTATTTATTTTTTTATTTTTTTAATT...............................................................................................................................................................3112.002.002.00--------------------------------------------
.............................................................................................................................TGGCAGGGTCATAGGACAATAGTGGAGT.................................................................................................282.000.00-------2.00-------------------------------------
...............................................................ATTTATTTATTTTTTTATTTTTTTAATTG..............................................................................................................................................................2912.002.002.00--------------------------------------------
...............................................................................................................................................ATAGTGGAGGGAAGGTCAGCAGGCA..................................................................................252.000.00----2.00----------------------------------------
..................................................................................................................AGAGGGGGATTTGGCAGGGGC...................................................................................................................212.000.00----2.00----------------------------------------
......................................................................TATTTTTTTATTTTTTTAACAG..............................................................................................................................................................221.000.00-1.00-------------------------------------------
.......................................................................................................................GGGATTTGGCAGGGTCATAGGACAATAGTGG....................................................................................................3101.001.00------1.00--------------------------------------
.........................................................................................................................................................GAAGGTCAGCAGATAAACAAGTGAACTCTG...................................................................301.000.00----------------1.00----------------------------
.................................................................................................................................................AGTGGAGGGAAGGTCAGCAGACC..................................................................................231.000.00----1.00----------------------------------------
..............................................................CATTTATTTATTTTTTTATTTTTG....................................................................................................................................................................241.000.00-1.00-------------------------------------------
...........................................................................................................................................................................AAGTGAACAAAGGTCTCTGGTTTCCC.....................................................261.000.00----1.00----------------------------------------
......................................................................................................................................................................................................AGGCAGAGGACCCTGCGGCCGCAG............................241.000.00---1.00-----------------------------------------
...............................................................ATTTATTTATTTTTTTATTTTTTTAACAG..............................................................................................................................................................291.000.001.00--------------------------------------------
...........................................................TCACATTTATTTATTTTTTTATTTTTTTAATTA..............................................................................................................................................................3311.002.00-1.00-------------------------------------------
...........................................................TCACATTTATTTATTTTTTTATTTG......................................................................................................................................................................251.000.00--1.00------------------------------------------
.......................................................................................AATTGATCATTCTTGGGTGTTCCTC..........................................................................................................................................251.000.00----1.00----------------------------------------
...............................................................ATTTATTTATTTTTTTATTTTCAG...................................................................................................................................................................241.000.00-----1.00---------------------------------------
.................................ATAAAAGGAAAAGGGGACTGTACTG................................................................................................................................................................................................2511.001.00----------------------------------------1.00----
.....................................................................................................................................................................................................TAGGCAGAGGACCCTGCGGCCTTCCATAG........................291.000.00-----------------1.00---------------------------
.........................................................................................................................................AGGACAATAGTGGAGGGAAAA............................................................................................211.000.00-------1.00-------------------------------------
...................................................................ATTTATTTTTTTATTTTTTTCAG................................................................................................................................................................231.000.00--1.00------------------------------------------
..................................................................................................................................................................................................TCCTAGGCAGAGGACCCTGCGGCCTCTG............................281.000.00----1.00----------------------------------------
.................................................................................................................................................................................ACAAAGGTCTCTGGTTTTTTTT...................................................221.000.00-----------------------1.00---------------------
...............................................................................................................................GCAGGGTCATAGGACAATAGTGGAGGGT...............................................................................................281.000.00-------1.00-------------------------------------
.........................................................................................................................................AGGACAATAGTGGAGGGAATT............................................................................................211.000.00-------1.00-------------------------------------
....................................................................TTTATTTTTTTATTTTTTTAATTAG.............................................................................................................................................................251.000.001.00--------------------------------------------
....................................................................................................................................................................................AAGGTCTCTGGTTTTTTCC...................................................191.000.00---1.00-----------------------------------------
.....................................................................................................................................................................................................TAGGCAGAGGACCCTGCGGCCCGG.............................241.000.00---1.00-----------------------------------------
...........................................................TCACATTTATTTATTTTTTTATTTTTTTATTTG..............................................................................................................................................................331.000.00--1.00------------------------------------------
............................................................................................................................................................................................................................CCGCAGTGTTTGTGTCCCTGG.........2101.001.00----------1.00----------------------------------
....................................................................................................................................................................GATAAACAAGTGAACAAAGGGCTC..............................................................241.000.00------------------1.00--------------------------
................................................................................................................................................TAGTGGAGGGAAGGTCAGCAGATAAACAAGTT..........................................................................321.000.00-------1.00-------------------------------------
...............................................................ATTTATTTATTTTTTTATTTTTTTCTT................................................................................................................................................................271.000.00---1.00-----------------------------------------
................................................................................................................................................TAGTGGAGGGAAGGTCAGCAGGCAA.................................................................................251.000.00---1.00-----------------------------------------
...............................................................................................................................................ATAGTGGAGGGAAGGTCAGCAGATAAGCGA.............................................................................301.000.00----1.00----------------------------------------
.................................................................................................................................................AGTGGAGGGAAGGTCAGCAAAC...................................................................................221.000.00----1.00----------------------------------------
.............................................................ACATTTATTTATTTTTTTATTTTTTTAATTG..............................................................................................................................................................3111.001.001.00--------------------------------------------
..............................................................CATTTATTTATTTTTTTATTTTTTTTG.................................................................................................................................................................271.000.00-1.00-------------------------------------------
...............................................................ATTTATTTATTTTTTTATCAAG.....................................................................................................................................................................221.000.00--1.00------------------------------------------
.................................................................................................................................................AGTGGAGGGAAGGTCAGCAGACAAC................................................................................251.000.00----1.00----------------------------------------
..................................................................................................................................................................CAGATAAACAAGTGAACTCTG...................................................................211.000.00----------------1.00----------------------------
..................................................................................................................AGAGGGGGATTTGGCAGGGGGAC.................................................................................................................231.000.00---1.00-----------------------------------------
................................................................................................................................................................................................TTTCCTAGGCAGAGGACCCTGCGGCCCG..............................281.000.00---1.00-----------------------------------------
..............................................................................................................................GGCAGGGTCATAGGACAAAAGC......................................................................................................221.000.00---------1.00-----------------------------------
......................................................................................................................................................................................................AGGCAGAGGACCCTGCGGCCTTCCGCACCG......................301.000.00----1.00----------------------------------------
........................................................................................................................................TAGGACAATAGTGGAGGGGGG.............................................................................................211.000.00-------1.00-------------------------------------
.................................................................................................................................................AGTGGAGGGAAGGTCAGCAGATAAACAAGCGA.........................................................................321.000.00----1.00----------------------------------------
..................................................................................................................AGAGGGGGATTTGGCAGGCCAT..................................................................................................................221.000.00----1.00----------------------------------------
..........................................................................................................................................................................................................AGAGGACCCTGCGGCCAAC.............................191.000.00---------------------------------------1.00-----
........................................................................................................................GGATTTGGCAGGGTCATAGGACAATAGGGGA...................................................................................................311.000.00-------------------1.00-------------------------
............................................................CACATTTATTTATTTTTTTATTTATTG...................................................................................................................................................................271.000.00-1.00-------------------------------------------
............................................................CACATTTATTTATTTTTTTATTTTTTTAA.................................................................................................................................................................2911.001.00-1.00-------------------------------------------
....................................................................................................................AGGGGGATTTGGCAGGGGAC..................................................................................................................201.000.00---1.00-----------------------------------------
......................................................................................................................................................AGGGAAGGTCAGCAGATAAACAAGTGAACAA.....................................................................3101.001.00--------1.00------------------------------------
......................................................................................................................................CATAGGACAATAGTGGAGGGAAGATA..........................................................................................261.000.00---------1.00-----------------------------------
..................................................................................................................................................................................................TCCTAGGCAGAGGACCCTGCGGCCTTCCTAG.........................311.000.00---1.00-----------------------------------------
...................................................................ATTTATTTTTTTATTTTTTTAACAG..............................................................................................................................................................251.000.001.00--------------------------------------------
.................................................................................................................................................AGTGGAGGGAAGGTCAGCAGGC...................................................................................221.000.00---1.00-----------------------------------------
...........................................................TCACATTTATTTATTTTTTTATTTTTTTAATCG..............................................................................................................................................................331.000.00-----1.00---------------------------------------
..................................................................TATTTATTTTTTTATTTTCAG...................................................................................................................................................................211.000.00-1.00-------------------------------------------
..........................................................................................................................................................AAGGTCAGCAGATAAACAAGCGA.........................................................................231.000.00---1.00-----------------------------------------
..................................................................................................................................................................................CAAAGGTCTCTGGTTTTCCTAGGCAGAGGA..........................................3001.001.00------1.00--------------------------------------
.....................................................................................................................................TCATAGGACAATAGTGGAGGGAAGGTCA.........................................................................................2801.001.00--------1.00------------------------------------
.....................................................................................................................................................................................................TAGGCAGAGGACCCTGCGGCCTTCCCAG.........................281.000.00---1.00-----------------------------------------
.............................................................ACATTTATTTATTTTTTTATTTTTTTCG.................................................................................................................................................................281.000.001.00--------------------------------------------
........................................................................................................................................................GGAAGGTCAGCAGATAAACAAGTGAACAAAGG..................................................................3201.001.00--------1.00------------------------------------
.....................................................................................................................................................................................................TAGGCAGAGGACCCTGCGGCCGC..............................231.000.00---1.00-----------------------------------------
...............................................................ATTTATTTATTTTTTTATTTTTTAAG.................................................................................................................................................................261.000.00-1.00-------------------------------------------
.................................................................................................................................................................................................TTCCTAGGCAGAGGACCCTGCGGCCTCCCT...........................301.000.00----1.00----------------------------------------
............................................................................................................................................................................................................................CCGCAGTGTTTGTGTAGGG...........191.000.00---------------------------------1.00-----------
...........................................................TCACATTTATTTATTTTTTTATTTTTTTATTTT..............................................................................................................................................................331.000.001.00--------------------------------------------
........................................................................................................................................TAGGACAATAGTGGAGGGAGTG............................................................................................221.000.00--------------------------------------1.00------
........................................................................................................................GGATTTGGCAGGGTCATAGGACAATAGTGGAGG.................................................................................................3301.001.00------1.00--------------------------------------
.............................................................................................................................TGGCAGGGTCATAGGACAATAGTGGAGGTTA..............................................................................................311.000.00-------1.00-------------------------------------
.............................................................................................................................TGGCAGGGTCATAGGACAATAGTGAGGG.................................................................................................281.000.00-------1.00-------------------------------------
..............................................................................................................................GGCAGGGTCATAGGACAATAGTGTAAT.................................................................................................271.000.00--------------1.00------------------------------
............................................................CACATTTATTTATTTTTTAG..........................................................................................................................................................................201.000.00-----1.00---------------------------------------
...............................................................................................................................................................................GAACAAAGGTCTCTGGAA.........................................................181.000.00----------1.00----------------------------------
.................................................................................................................CAGAGGGGGATTTGGCACGGC....................................................................................................................211.000.00------------------------------1.00--------------
..................................................................TATTTATTTTTTTATTTTTTTCCAG...............................................................................................................................................................251.000.001.00--------------------------------------------
.................................................................................................................................................................................................TTCCTAGGCAGAGGACCCTGCGGCCTCCT............................291.000.00----1.00----------------------------------------
......................................................................................................................................................................................................AGGCAGAGGACCCTGCGGCCTGC.............................231.000.00---1.00-----------------------------------------
........................................................................................................................................TAGGACAATAGTGGA...................................................................................................1501.001.00------1.00--------------------------------------
.........................................................................................................................................................................ACAAGTGAACAAAGGTCTCTGGGTC........................................................251.000.00---1.00-----------------------------------------
...................................................................ATTTATTTTTTTATTTTTTTCTGG...............................................................................................................................................................241.000.00---1.00-----------------------------------------
..........................................................TTCACATTTATTTATTTTTTTATTTT......................................................................................................................................................................2611.001.00--1.00------------------------------------------
................................................................................................................................CAGGGTCATAGGACAATAGC......................................................................................................201.000.00-------------1.00-------------------------------
.......................................................................................................................GGGATTTGGCAGGGTCATAGGACAATAGTGGAG..................................................................................................3301.001.00--------1.00------------------------------------
............................................................................................................................................................................AGTGAACAAAGGTCTCTGGTA.........................................................211.000.00-------------------------1.00-------------------
.............................................................ACATTTATTTATTTTTTTATTTTTCG...................................................................................................................................................................261.000.00--1.00------------------------------------------
..................................................................................................................AGAGGGGGATTTGGCAGGGGACA.................................................................................................................231.000.00----1.00----------------------------------------
..............................................................CATTTATTTATTTTTTTATTTATG....................................................................................................................................................................241.000.00-----1.00---------------------------------------
.....................................................................................................................GGGGGATTTGGCAGGGTCATAGGCCA...........................................................................................................261.000.00------------------------1.00--------------------
............................................................................................................................................................................AGTGAACAAAGGTCTCTGGCTC........................................................221.000.00----1.00----------------------------------------
.................................................................................................................................................................................................................................GTGTTTGTGTCCCTGGGTACTCTG.241.000.00---------------1.00-----------------------------
...............................................................................................................................................ATAGTGGAGGGAAGGTCAGCAGACCA.................................................................................261.000.00----1.00----------------------------------------
............................................................................................................................................................................................................AGGACCCTGCGGCCTTCCGCGT........................221.000.00----1.00----------------------------------------
............................................................CACATTTATTTATTTTTTTATTG.......................................................................................................................................................................231.000.00--1.00------------------------------------------
...............................................................................................................................................ATAGTGGAGGGAAGGCAGC........................................................................................191.000.00---1.00-----------------------------------------
.............................................................ACATTTATTTATTTTTTTCTAG.......................................................................................................................................................................221.000.00-----1.00---------------------------------------
.............................................................................................................................................CAATAGTGGAGGGAAGGTCAGCAGATAAAAAA.............................................................................321.000.00-------------------------------------1.00-------
....................................................................................................................................................................................................CTAGGCAGAGGACCCTGTGTT.................................211.000.00-----------------1.00---------------------------
................................................................TTTATTTATTTTTTTATTTTTTTCTAT...............................................................................................................................................................271.000.001.00--------------------------------------------
..........................................................................................................................................................................................................AGAGGACCCTGCGGCCTTCCCGTG........................241.000.00----1.00----------------------------------------
......................................................................................................................................................AGGGAAGGTCAGCAGATAAACAAGCGA.........................................................................271.000.00----1.00----------------------------------------
................................................................................................................................CAGGGTCATAGGACAATAGTGGAGGGTA..............................................................................................281.000.00------------1.00--------------------------------
.............................................................ACATTTATTTATTTTTTTATTTACG....................................................................................................................................................................2551.000.20-0.800.20------------------------------------------
...........................................................................................................................TTTGGCAGGGTCATAGGACAATAGTGGAGT.................................................................................................301.000.00-------1.00-------------------------------------
.................................................................TTATTTATTTTTTTATTTTTTTAATTG..............................................................................................................................................................2711.001.001.00--------------------------------------------
.................................................................................................................................................................................................TTCCTAGGCAGAGGACCCTGCGGCCCGC.............................281.000.00---1.00-----------------------------------------
.......................................................................................................................................................................................GTCTCTGGTTTTCCTAGGC................................................1901.001.00----------1.00----------------------------------
...............................................................ATTTATTTATTTTTTTATTTTTTATC.................................................................................................................................................................261.000.00---1.00-----------------------------------------
..................................................................................................................AGAGGGGGATTTGGCAGGCCA...................................................................................................................211.000.00----1.00----------------------------------------
...........................................................TCACATTTATTTATTTTTTTATTTTTTTAAG................................................................................................................................................................311.000.00-1.00-------------------------------------------
............................................................................................................................................................................................................AGGACCCTGCGGCCTTCCGCAGAG......................241.000.00----1.00----------------------------------------
.......................................................................................................................................................................AAACAAGTGAACAAAGGTCTCTGTAT.........................................................261.000.00------------------------------------------1.00--
............................................................CACATTTATTTATTTTTTTATTTTTG....................................................................................................................................................................261.000.00-----1.00---------------------------------------
........................................................................................................................................TAGGACAATAGTGGAGGGAAGGTAT.........................................................................................251.000.00-------1.00-------------------------------------
...........................................................................................................................................................AGGTCAGCAGATAAACAAGTGAACTCTG...................................................................281.000.00-----------------------------------1.00---------
..............................................................CATTTATTTATTTTTTTATTTTAAG...................................................................................................................................................................251.000.001.00--------------------------------------------
...........................................................................................................................TTTGGCAGGGTCATAGGATTGC.........................................................................................................221.000.00---1.00-----------------------------------------
......................................................................................................................................................AGGGAAGGTCAGCAGATAAACAAACG..........................................................................261.000.00---1.00-----------------------------------------
..................................................................TATTTATTTTTTTATTTTTCATG.................................................................................................................................................................231.000.00--1.00------------------------------------------
............................................................................................................................................................................................................AGGACCCTGCGGCCTTCCGCGTG.......................231.000.00----1.00----------------------------------------
......................TTTCTTCATTTATAAACATC................................................................................................................................................................................................................201.000.00--------------1.00------------------------------
............................................................................................................................................................................................................AGGACCCTGCGGCCTTCCGAGTG.......................231.000.00----1.00----------------------------------------
...............................................................................................................................GCAGGGTCATAGGACAATAGTGGAGGGAAGG............................................................................................3101.001.00--------1.00------------------------------------
................................................................................................................................................................................................................................AGTGTTTGTGTCCCTGGGTACTGAG.251.000.00---1.00-----------------------------------------
.............................................................................................................................TGGCAGGGTCATAGGACAATAGGGGA...................................................................................................261.000.00-------1.00-------------------------------------
.....................................................TACTGTTCACATTTATTTATTTTTTTATTT.......................................................................................................................................................................3011.001.00------------1.00--------------------------------
....................................AAAGGAAAAGGGGACTGTACTGTTCA............................................................................................................................................................................................2611.001.00--------------1.00------------------------------
.............................................................................................................................TGGCAGGGTCATAGGACAATAGTGGAGGGAAGG............................................................................................3301.001.00--------1.00------------------------------------
....................................................................................................................AGGGGGATTTGGCAGTT.....................................................................................................................171.000.00---------------------------1.00-----------------
.........................................................................................TTGATCATTCTTGGGTGTTTCCTGC........................................................................................................................................251.000.00----1.00----------------------------------------
....................................................................TTTATTTTTTTATTTTTTTAATTG..............................................................................................................................................................2420.500.500.50--------------------------------------------
......................................................................TATTTTTTTATTTTTTTAATTG..............................................................................................................................................................2230.330.330.33--------------------------------------------
.............................................................ACATTTATTTATTTTTTTATTTTTT....................................................................................................................................................................2540.250.25-----0.25---------------------------------------
..............................................................CATTTATTTATTTTTTTATTTTTT....................................................................................................................................................................2450.200.20--0.20------------------------------------------
.............................................................ACATTTATTTATTTTTTTATTTATG....................................................................................................................................................................2550.200.200.20--------------------------------------------
.............................................................ACATTTATTTATTTTTTTATTG.......................................................................................................................................................................2250.200.20--0.20------------------------------------------
.............................................................ACATTTATTTATTTTTTTATTT.......................................................................................................................................................................2250.200.20-----0.20---------------------------------------
.............................................................ACATTTATTTATTTTTTTATT........................................................................................................................................................................2150.200.20-0.20-------------------------------------------
.................................................................TTATTTATTTTTTTATTTTTTTAA.................................................................................................................................................................2450.200.20--0.20------------------------------------------

Antisense strand
ACTCTTGGAGTGAGCCTTTGTTTTTCTTCATTTATAAAAGGAAAAGGGGACTGTACTGTTCACATTTATTTATTTTTTTATTTTTTTAATTGATCATTCTTGGGTGTTTCTCCCAGAGGGGGATTTGGCAGGGTCATAGGACAATAGTGGAGGGAAGGTCAGCAGATAAACAAGTGAACAAAGGTCTCTGGTTTTCCTAGGCAGAGGACCCTGCGGCCTTCCGCAGTGTTTGTGTCCCTGGGTACTTGAG
.......................................................((.(((((............................((((.((((((((.......)))).)))).)))).......(((....)))....))))).))................................................................................................
..................................................51.......................................................................................................156............................................................................................
SizePerfect hitTotal NormPerfect NormSRR189777(GSM714637)
cell line: HEK293clip variant: PAR-CLIPenzyma. (cell line)
SRR189775(GSM714635)
cell line: HEK293clip variant: CLIPenzymatic . (cell line)
SRR189776(GSM714636)
cell line: HEK293clip variant: CLIPenzymatic . (cell line)
SRR189780(GSM714640)
cell line: HEK293clip variant: PAR-CLIPenzyma. (cell line)
SRR189779(GSM714639)
cell line: HEK293clip variant: PAR-CLIPenzyma. (cell line)
SRR189778(GSM714638)
cell line: HEK293clip variant: PAR-CLIPenzyma. (cell line)
DRR000555(DRX000313)
"THP-1 whole cell RNA, no treatment". (cell line)
SRR553576(SRX182782)
source: Testis. (testes)
DRR000556(DRX000314)
"THP-1 whole cell RNA, after 3 day treatment . (cell line)
SRR039622(GSM531985)
HCV(+) Adjacent Tissue Sample. (liver)
DRR000558(DRX000316)
"THP-1 whole cell RNA, after 3 day treatment . (cell line)
DRR000559(DRX000317)
"THP-1 whole cell RNA, no treatment". (cell line)
SRR189781(GSM714641)
cell line: HEK293clip variant: PAR-CLIPenzyma. (cell line)
DRR000557(DRX000315)
"THP-1 whole cell RNA, after 3 day treatment . (cell line)
SRR553572(SRX182778)
source: Frontal Cortex. (Frontal Cortex)
SRR342894(SRX096790)
small RNA seq of Right atrial tissue. (heart)
SRR330901(SRX091739)
tissue: skin psoriatic uninvolveddisease stat. (skin)
SRR207115(GSM721077)
XRN1&2 knockdown. (XRN1/XRN2 cell line)
SRR039623(GSM531986)
HCV(+) HCC Tissue Sample. (liver)
RoviraIPAgo2(Rovira)
total RNA. (ago2 breast)
SRR330889(SRX091727)
tissue: skin psoriatic uninvolveddisease stat. (skin)
SRR189784GSM1105748AGO1(GSM1105748)
small RNA sequencing data. (ago1 hela)
SRR037936(GSM510474)
293cand1. (cell line)
SRR015359(GSM380324)
Germinal Center B cell (GC136). (B cell)
SRR191613(GSM715723)
66genomic small RNA (size selected RNA from t. (breast)
SRR094130(GSM651906)
small RNA(18-35nt)small RNA deep sequencing o. (uterus)
GSM450601(GSM450601)
miRNA sequencing raw reads from post-mortem s. (brain)
SRR207112(GSM721074)
RRP40 knockdown. (RRP40 cell line)
SRR553573(SRX182779)
source: Cerebellum. (Cerebellum)
TAX577740(Rovira)
total RNA. (breast)
SRR189785SRR330897(SRX091735)
tissue: skin psoriatic uninvolveddisease stat. (skin)
SRR095854(SRX039177)
"miRNA were isolated from FirstChoice Human B. (brain)
SRR330887(SRX091725)
tissue: skin psoriatic uninvolveddisease stat. (skin)
SRR330917(SRX091755)
tissue: normal skindisease state: normal. (skin)
SRR390723(GSM850202)
total small RNA. (cell line)
SRR330894(SRX091732)
tissue: skin psoriatic uninvolveddisease stat. (skin)
GSM450602(GSM450602)
miRNA sequencing raw reads from post-mortem s. (brain)
SRR038863(GSM458546)
MM603. (cell line)
GSM450599(GSM450599)
miRNA sequencing raw reads from post-mortem s. (brain)
SRR040043(GSM532928)
G428T. (cervix)
GSM450605(GSM450605)
miRNA sequencing raw reads from post-mortem s. (brain)
SRR342898(SRX096794)
small RNA seq of Right atrial tissue. (heart)
GSM956925Paz8D5(GSM956925)
"cell line: HEK293 cell linepassages: 15-20ip. (cell line)
.................................................................................................................................................................GCAGATAAACAAGTGAACAGACC.................................................................. 233.000.00---3.00-----------------------------------------
.........................................................................................................................................................................................................................GGGACACAAACACTGCGGAAG............ 2102.002.00------2.00--------------------------------------
............................................................................................................................................................................................................................AGGGACACAAACACTGCGG........... 1902.002.00------2.00--------------------------------------
...................................................................................................................................................................................................................AGGGACACAAACACTGCGGAAGGCCGCA........... 2802.002.00------2.00--------------------------------------
.......................................................................................................................................................GGGAAGGTCAGCAGATAAACCAC............................................................................ 232.000.00---1.001.00----------------------------------------
.............................................................................................................................................................................................................................AGGGACACAAACACTGCG........... 1802.002.00------1.00------1.00-------------------------------
...............................................................................................................................................................................................................................ACCCAGGGACACAAACACTG....... 2002.002.00------1.00----1.00---------------------------------
...........................................................................................................................................................AGGTCAGCAGATAAACACTG........................................................................... 202.000.00-----------------------------1.00-------------1.00-
.......................................................................................................................................................................................TGCCTAGGAAAACCAGAGAC............................................... 2001.001.00------1.00--------------------------------------
..............................................................................................................................................................................................................................GCAGTGTTTGTGTCCCTT.......... 181.000.00-----------1.00---------------------------------
..............................................................................................................................................................................................................................CAGGGACACAAACACTGC.......... 1801.001.00------1.00--------------------------------------
.................................................................................................................................................................................................................CCTGCGGCCTTCCGCAGTGTTC................... 221.000.00---1.00-----------------------------------------
...........................................................................................ACACCCAAGAATGATC............................................................................................................................................... 1601.001.00-----------1.00---------------------------------
.......................................................................................................................................................................................................GGCAGAGGACCCTGCGGCCTTAGG........................... 241.000.00----1.00----------------------------------------
................................................................................................................................................................................AACAAAGGTCTCTGGTTTTCCTAACT................................................ 261.000.00---------1.00-----------------------------------
.........................................................................................................................................................................................................CAGAGGACCCTGCGGCCTTCCGCAA........................ 251.000.00---1.00-----------------------------------------
.............................................................................................................CTCCCAGAGGGGGATGG............................................................................................................................ 171.000.00---------------------1.00-----------------------
................................................................................................................................................................................AACAAAGGTCTCTGGTTTTT...................................................... 201.000.00------------------1.00--------------------------
.................................................................................................................................................AGTGGAGGGAAGGTCAGCAGATCG................................................................................. 241.000.00-------------------------------1.00-------------
..................................................................................................................................................................................AGGAAAACCAGAGACCTTTG.................................................... 2001.001.00--------1.00------------------------------------
.................................................................................................................................................AGTGGAGGGAAGGTCAGCAGATGTCC............................................................................... 261.000.00---1.00-----------------------------------------
..........................................................................................................................................................................................................................GGGACACAAACACTGCGGAA............ 2001.001.00-----------1.00---------------------------------
.......................................................................................................................................................................................................GGCAGAGGACCCTGCGGCCTTCCGCAAGGA..................... 301.000.00----1.00----------------------------------------
...........................................................................................................................................................................................TCTGCCTAGGAAAACCAG............................................. 1801.001.00----------1.00----------------------------------
....................................................................................................................................................................................................................................TTTGTGTCCCTGGGTAAA.... 181.000.00----------------------------1.00----------------
.......................................................................................................................................................................................................................GCCTTCCGCAGTGTTTTG................. 181.000.00------------------------------------1.00--------
........................................................................................................................................................................................................................AGGGACACAAACACTGCGGAAGG........... 2301.001.00----------1.00----------------------------------
...........................................................................................................................................................................................................................AGGGACACAAACACTGCGGA........... 2001.001.00-----------1.00---------------------------------
........................................................................................................................................................................................................................CCTTCCGCAGTGTTTGTGTCCCTGC......... 251.000.00---------1.00-----------------------------------
......................................................................................................................................................................................................................GGCCTTCCGCAGTGTTTGTGTCCCTGATA....... 291.000.00---------1.00-----------------------------------
..................................................................................................................................................................................................................................AGTACCCAGGGACACAAACA.... 2001.001.00-----------1.00---------------------------------
................................................................................................................................................TAGTGGAGGGAAGGTCAGCAGATAAACACGG........................................................................... 311.000.00---------1.00-----------------------------------
...............................................................................................................................................................................................................................CAGTGTTTGTGTCCCTGGGTTC..... 221.000.00--------------------------1.00------------------
............................................................................................................................................................................................................TGCGGAAGGCCGCAGGGTCCT......................... 2101.001.00--------------------------------------------1.00
.......................................................................................................................................................................................................................GCCTTCCGCAGTGTTTGTGTCCCTGGGTATGT... 321.000.00-------1.00-------------------------------------
.......................................................................................................................................................................................................GGCAGAGGACCCTGCGGCCTAGG............................ 231.000.00----1.00----------------------------------------
........................................................................................................................................................................................................................CAGGGACACAAACACTGCGGAAGG.......... 2401.001.00-------------1.00-------------------------------
..............................................................................................................................................................................................................................TACCCAGGGACACAAACACTGC...... 2201.001.00-------------1.00-------------------------------
.........................................................................................................................................................................................................................GACACAAACACTGCGGAAG.............. 1901.001.00------1.00--------------------------------------
........................................................................................................................................................................................................................CCTTCCGCAGTGTTTGTGTCCCTGGGTACG.... 301.000.00---------1.00-----------------------------------
.........................................................................................................................................................................................................................CTTCCGCAGTGTTTGTTGT.............. 191.000.00-----------------------------------------1.00---
..............................................................................................................................................................................................................GACCCTGCGGCCTTCCGCAGTGCC.................... 241.000.00--------------------1.00------------------------
..........................................................................................................................................................................................................................AGGGACACAAACACTGCGGAA........... 2101.001.00----------1.00----------------------------------
.......................................................................................................................................................................................................................CCCAGGGACACAAACACTGCGGAAGGC........ 2701.001.00------1.00--------------------------------------
......................................................................................................................................................AGGGAAGGTCAGCAGATAAAGAA............................................................................. 231.000.00----------------------1.00----------------------
............................................................................................................................................................................................................................CCGCAGTGTTTGTGTCCCTGTTT....... 231.000.00-------1.00-------------------------------------