ID: uc002icc.2_intron_3_0_chr17_41106985_r
GENE: (8)
chr17:41106935-41107224-


(2)
AGO1.ip
(1)
AGO1.ip OTHER.mut
(2)
AGO2.ip
(9)
B-CELL
(7)
BRAIN
(11)
BREAST
(32)
CELL-LINE
(10)
CERVIX
(1)
FIBROBLAST
(4)
HEART
(5)
HELA
(7)
LIVER
(3)
OTHER
(1)
RRP40.ip
(22)
SKIN
(3)
UTERUS
(1)
XRN.ip

Sense strand
ATGTGGAAGCAGTGAAAAAGCTCCAGAACTCCACCAAGATCCTGCAGAAGGTGATTTATTCCATGGAGGGTAGAGAGGGCATGGGCCCTGCCTAGGATAGGCTCTGCAGACTTGGTCTTCTGCCTAAACAGATGTGTAGTTTGTCAAAGTGGGAGTGAGGGGAGAATGAGGTGGAGGGAAGCTGATACTCTCTATTGTTATCCTTTCCATTTATCTACTGAGTTACCATATCCATTTCAGAATAACCTGAATCTGCTCAGAGACCTGGCTGTGCACATTGCCCATAGCCT
.......................................................................................................................................................((((((.((..((.(((((((((((((.........))))))))).)))).))..)).....((....))...........))))))....................................................
......................................................................................................................................................151......................................................................................240................................................
SizePerfect hitTotal NormPerfect NormSRR553572(SRX182778)
source: Frontal Cortex. (Frontal Cortex)
SRR039635(GSM518472)
THP1_nuc_sRNAs. (cell line)
GSM1105753INPUT(GSM1105753)
small RNA sequencing data. (hela)
DRR000556(DRX000314)
"THP-1 whole cell RNA, after 3 day treatment . (cell line)
SRR039636(GSM518473)
THP1_cyto_sRNAs. (cell line)
DRR000558(DRX000316)
"THP-1 whole cell RNA, after 3 day treatment . (cell line)
SRR387910(GSM843862)
antibody for ip: Ago2. (ago2 cell line)
SRR037944(GSM510482)
293DcrTN_cand5. (cell line)
SRR029124(GSM416753)
HeLa. (hela)
SRR330890(SRX091728)
tissue: skin psoriatic uninvolveddisease stat. (skin)
SRR037876(GSM522374)
fibroblasts_cell_culture. (fibroblast)
SRR094132(GSM651908)
small RNA(18-35nt)small RNA deep sequencing o. (uterus)
DRR000557(DRX000315)
"THP-1 whole cell RNA, after 3 day treatment . (cell line)
SRR039622(GSM531985)
HCV(+) Adjacent Tissue Sample. (liver)
SRR330859(SRX091697)
tissue: skin psoriatic involveddisease state:. (skin)
SRR330878(SRX091716)
tissue: skin psoriatic involveddisease state:. (skin)
SRR444060(SRX128908)
Sample 18cDNABarcode: AF-PP-340: ACG CTC TTC . (skin)
SRR039637(GSM518474)
THP1_total_sRNAs. (cell line)
DRR001488(DRX001042)
"Hela short nuclear cell fraction, LNA(+)". (hela)
SRR060983(GSM569187)
Human pre-germinal center B cell [09-001]. (cell line)
SRR342894(SRX096790)
small RNA seq of Right atrial tissue. (heart)
GSM450604(GSM450604)
miRNA sequencing raw reads from post-mortem s. (brain)
SRR444049(SRX128897)
Sample 9cDNABarcode: AF-PP-334: ACG CTC TTC C. (skin)
SRR189785SRR189779(GSM714639)
cell line: HEK293clip variant: PAR-CLIPenzyma. (cell line)
SRR553573(SRX182779)
source: Cerebellum. (Cerebellum)
SRR094131(GSM651907)
small RNA(18-35nt)small RNA deep sequencing o. (uterus)
SRR207111(GSM721073)
Whole cell RNA. (cell line)
SRR039614(GSM531977)
HBV-infected Liver Tissue. (liver)
SRR039615(GSM531978)
Severe Chronic Hepatitis B Liver Tissue. (liver)
DRR001489(DRX001043)
"Hela short nuclear cell fraction, control". (hela)
SRR342897(SRX096793)
small RNA seq of Left atrial tissue. (heart)
SRR207113(GSM721075)
IP against AGO 1 & 2. (ago1/2 cell line)
SRR040014(GSM532899)
G623N. (cervix)
SRR060986(GSM569190)
Human memory B cell [09-001]. (cell line)
SRR060169(GSM565979)
5-8F_cytoplasm. (cell line)
RoviraIPAgo2(Rovira)
total RNA. (ago2 breast)
SRR330872(SRX091710)
tissue: skin psoriatic involveddisease state:. (skin)
SRR330880(SRX091718)
tissue: skin psoriatic involveddisease state:. (skin)
SRR040018(GSM532903)
G701N. (cervix)
SRR040041(GSM532926)
G612T. (cervix)
SRR330912(SRX091750)
tissue: normal skindisease state: normal. (skin)
SRR191552(GSM715662)
42genomic small RNA (size selected RNA from t. (breast)
DRR000555(DRX000313)
"THP-1 whole cell RNA, no treatment". (cell line)
SRR040037(GSM532922)
G243T. (cervix)
SRR039190(GSM494809)
PBMCs were isolated by ficoll gradient from t. (blood)
SRR330863(SRX091701)
tissue: skin psoriatic involveddisease state:. (skin)
SRR330922(SRX091760)
tissue: normal skindisease state: normal. (skin)
SRR060984(GSM569188)
Human plasma cell [09-001]. (cell line)
SRR189782SRR015358(GSM380323)
NaÌøve B Cell (Naive39). (B cell)
SRR039617(GSM531980)
HBV(+) Adjacent Tissue Sample 1. (liver)
SRR330887(SRX091725)
tissue: skin psoriatic uninvolveddisease stat. (skin)
SRR033727(GSM497072)
HIV-positive DL (HIV412). (B cell)
SRR191549(GSM715659)
105genomic small RNA (size selected RNA from . (breast)
TAX577741(Rovira)
total RNA. (breast)
SRR330896(SRX091734)
tissue: skin psoriatic uninvolveddisease stat. (skin)
SRR037932(GSM510470)
293cand4_rep1. (cell line)
SRR189780(GSM714640)
cell line: HEK293clip variant: PAR-CLIPenzyma. (cell line)
SRR039193(GSM494812)
HL60 cell line is derived from acute promyelo. (cell line)
SRR015448(SRR015448)
cytoplasmic small RNAs. (breast)
SRR040038(GSM532923)
G531N. (cervix)
SRR189786SRR330915(SRX091753)
tissue: normal skindisease state: normal. (skin)
SRR191582(GSM715692)
95genomic small RNA (size selected RNA from t. (breast)
SRR342895(SRX096791)
small RNA seq of Left atrial tissue. (heart)
SRR038853(GSM458536)
MELB. (cell line)
SRR191572(GSM715682)
66genomic small RNA (size selected RNA from t. (breast)
SRR040020(GSM532905)
G699N_2. (cervix)
SRR040035(GSM532920)
G001T. (cervix)
SRR342896(SRX096792)
small RNA seq of Right atrial tissue. (heart)
SRR033729(GSM497074)
splenic MZL (Splenic414). (B cell)
SRR037933(GSM510471)
293cand4_rep2. (cell line)
SRR033711(GSM497056)
GCB DLBCL (GCB110). (B cell)
SRR189777(GSM714637)
cell line: HEK293clip variant: PAR-CLIPenzyma. (cell line)
SRR189781(GSM714641)
cell line: HEK293clip variant: PAR-CLIPenzyma. (cell line)
SRR038852(GSM458535)
QF1160MB. (cell line)
SRR207112(GSM721074)
RRP40 knockdown. (RRP40 cell line)
SRR033719(GSM497064)
6hr Activated B cell line (ABC158). (B cell)
SRR029054(GSM402329)
MCF7_smallRNAseq. (cell line)
GSM450609(GSM450609)
miRNA sequencing raw reads from post-mortem s. (brain)
SRR033720(GSM497065)
EBV activated B cell line (EBV159). (B cell)
DRR000559(DRX000317)
"THP-1 whole cell RNA, no treatment". (cell line)
SRR039625(GSM531988)
HBV(-) HCV(-) HCC Tissue Sample. (liver)
SRR207115(GSM721077)
XRN1&2 knockdown. (XRN1/XRN2 cell line)
SRR330889(SRX091727)
tissue: skin psoriatic uninvolveddisease stat. (skin)
GSM1105748AGO1(GSM1105748)
small RNA sequencing data. (ago1 hela)
SRR015446(SRR015446)
smallRNAs high-throughput sequencing Total. (breast)
SRR039620(GSM531983)
HBV(+) Adjacent Tissue Sample 2. (liver)
GSM450607(GSM450607)
miRNA sequencing raw reads from post-mortem s. (brain)
SRR330906(SRX091744)
tissue: normal skindisease state: normal. (skin)
SRR191586(GSM715696)
197genomic small RNA (size selected RNA from . (breast)
GSM532871(GSM532871)
G652N. (cervix)
SRR060985(GSM569189)
Human naive B cell [09-001]. (cell line)
SRR330923(SRX091761)
tissue: normal skindisease state: normal. (skin)
SRR330904(SRX091742)
tissue: normal skindisease state: normal. (skin)
SRR033726(GSM497071)
Mututated CLL (CLLM633). (B cell)
SRR095854(SRX039177)
"miRNA were isolated from FirstChoice Human B. (brain)
GSM450603(GSM450603)
miRNA sequencing raw reads from post-mortem s. (brain)
SRR040017(GSM532902)
G645T. (cervix)
GSM450608(GSM450608)
miRNA sequencing raw reads from post-mortem s. (brain)
SRR330902(SRX091740)
tissue: skin psoriatic uninvolveddisease stat. (skin)
SRR330920(SRX091758)
tissue: normal skindisease state: normal. (skin)
GSM450598(GSM450598)
miRNA sequencing raw reads from post-mortem s. (brain)
SRR330895(SRX091733)
tissue: skin psoriatic uninvolveddisease stat. (skin)
SRR060981(GSM569185)
Human centroblast [09-001]. (cell line)
SRR207114(GSM721076)
"IP against AGO 1 & 2, RRP40 knockdown". (ago1/2 RRP40 cell line)
SRR444043(SRX128891)
Sample 4cDNABarcode: AF-PP-339: ACG CTC TTC C. (skin)
SRR040028(GSM532913)
G026N. (cervix)
SRR033724(GSM497069)
L428 cell line (L428). (B cell)
TAX577744(Rovira)
total RNA. (breast)
SRR326282(GSM769512)
"Dicer mRNA was knocked down using siDicer, t. (cell line)
SRR033723(GSM497068)
L1236 cell line (L1236). (B cell)
TAX577745(Rovira)
total RNA. (breast)
SRR039611(GSM531974)
Human Normal Liver Tissue Sample 1. (liver)
SRR094130(GSM651906)
small RNA(18-35nt)small RNA deep sequencing o. (uterus)
SRR330893(SRX091731)
tissue: skin psoriatic uninvolveddisease stat. (skin)
...........................................................................................................................................................TGAGGGGAGAATGAGGTGGAG..................................................................................................................21216.5016.501.50--1.000.50-1.00------------------0.50--1.500.500.50------0.50-----------------1.00-------1.00---------0.50-----------0.50-0.50-0.500.500.500.50-0.500.50---0.50-0.500.50-0.500.50-----------
...........................................................................................................................................................TGAGGGGAGAATGAGGTGGAA..................................................................................................................21215.0011.50-1.00---1.00--2.00---1.001.00---1.00-------1.00-------------1.00-1.001.001.00-1.00----------1.00--------------1.00---------------------------------------------
...........................................................................................................................................................TGAGGGGAGAATGAGGTGGAAA.................................................................................................................22212.0011.501.00--1.00----1.00----------2.00---------1.00---1.00------------------1.001.001.00-------------1.00-------1.00----------------------------------------
...........................................................................................................................................................TGAGGGGAGAATGAGGTGGA...................................................................................................................20211.5011.500.500.50-0.500.50------------0.502.00--------0.50---------0.50-----------------------------------0.50----0.500.50-0.500.50---0.50-0.50----0.50--0.50-0.50-0.50--0.50-------------
...........................................................................................................................................................TGAGGGGAGAATGAGGTGG....................................................................................................................1936.006.000.33--0.330.33------0.330.33--------------0.67-----0.330.33------------------------------------------0.67----0.33-0.67------------------------0.33-0.33-0.330.33--
...........................................................................................................................................................TGAGGGGAGAATGAGGTG.....................................................................................................................1835.675.670.670.33---------1.67-----0.33-------0.330.330.33--------------------------------------------------0.330.33-0.33-0.67---------------------------------
...........................................................................................................................................................TGAGGGGAGAATGAGGTGGAGT.................................................................................................................2225.0016.501.001.00-------1.00-1.00------------------------------------------------1.00--------------------------------------------------------
...........................................................................................................................................................TGAGGGGAGAATGAGGTGGAAT.................................................................................................................2224.0011.501.00-----------------------------1.00----------------1.00----------------1.00----------------------------------------------------
..............................................................................................................................................................GGGGAGAATGAGGTGGAAA.................................................................................................................194.000.00-------4.00-------------------------------------------------------------------------------------------------------------
.............................................................................................................................................................AGGGGAGAATGAGGTGGAGT.................................................................................................................204.000.00--4.00------------------------------------------------------------------------------------------------------------------
...........................................................................................................................................................TGAGGGGAGAATGAGGTGGAAG.................................................................................................................2223.0011.50---------------2.00------------------------------1.00----------------------------------------------------------------------
...........................................................................................................................................................TGAGGGGAGAATGAGGTGGAAC.................................................................................................................2223.0011.50------3.00--------------------------------------------------------------------------------------------------------------
...........................................................................................................................................................TGAGGGGAGAATGAGGT......................................................................................................................1752.202.20------------0.20-------------0.400.20-------------------------------------------------0.20----------------------------0.400.40-------0.200.20
...........................................................................................................................................................TGAGGGGAGAATGAGGTGA....................................................................................................................1932.005.67-0.33------------------------------1.33-------------------------------------------------------------------------------0.33----
......................CCAGAACTCCACCAAGATCCTGCAGAAGA...............................................................................................................................................................................................................................................292.000.001.00---------------------------------------------------------------------1.00----------------------------------------------
...........................................................................................................................................................TGAGGGGAGAATGAGGTGGATA.................................................................................................................2222.0011.50-1.00-------------------------------------------------1.00-----------------------------------------------------------------
...........................................................................................................................................................TGAGGGGAGAATGAGGTGGAGC.................................................................................................................2222.0016.50---------------------1.00---------------------------------------------1.00-------------------------------------------------
.............GAAAAAGCTCCAGAACTCTG.................................................................................................................................................................................................................................................................202.000.00--------------------2.00------------------------------------------------------------------------------------------------
.............................................................................................................................................................................................................................GTTACCATATCCATTTG....................................................172.000.00-----------------------2.00---------------------------------------------------------------------------------------------
...........................................................................................................................................................TGAGGGGAGAATGAGGTGGAT..................................................................................................................2122.0011.50-1.00------------------------------------------------1.00------------------------------------------------------------------
................................ACCAAGATCCTGCAGAAG................................................................................................................................................................................................................................................1812.002.00-1.00-1.00-----------------------------------------------------------------------------------------------------------------
...........................................................................................................................................................TGAGGGGAGAATGAGGTGGAGTAA...............................................................................................................2422.0016.50----1.00---------1.00------------------------------------------------------------------------------------------------------
..........................................................................................................................................................................................................................TGAGTTACCATATCCATTTCAT..................................................222.000.00---------------------------------------------------------1.00--------------1.00--------------------------------------------
.......................CAGAACTCCACCAAGATCCTGCAGAAG................................................................................................................................................................................................................................................2711.001.00-------------------------------1.00-------------------------------------------------------------------------------------
.......................................................................................................................................................................................................................................................................CCTGGCTGTGCACATTGTCCC......211.000.00-------------------------------------------------1.00-------------------------------------------------------------------
...........................................................................................................................................................TGAGGGGAGAATGAGGTGGAGG.................................................................................................................2211.001.00---------------------1.00-----------------------------------------------------------------------------------------------
........................AGAACTCCACCAAGATCCTGCAGAAGAA..............................................................................................................................................................................................................................................281.000.00-------------1.00-------------------------------------------------------------------------------------------------------
...........................................................................................................................................................TGAGGGGAGAATGAG........................................................................................................................1501.001.00---1.00-----------------------------------------------------------------------------------------------------------------
...........................................................................................................................................................TGAGGGGAGAATGAGGTGGAGTTAT..............................................................................................................2521.0016.50--------------------------1.00------------------------------------------------------------------------------------------
.........................................................................................................GCAGACTTGGTCTTCTGTGT.....................................................................................................................................................................201.000.00----------1.00----------------------------------------------------------------------------------------------------------
...........................................................................................................................................................TGAGGGGAGAATGAGGTGGATAAT...............................................................................................................2421.0011.50----------------------------------1.00----------------------------------------------------------------------------------
...........................................................................................................................................................TGAGGGGAGAATGAGGTGGATTTT...............................................................................................................2421.0011.50-----1.00---------------------------------------------------------------------------------------------------------------
...........................................................................................................................................................TGAGGGGAGAATGAGGTGGAGCAAG..............................................................................................................2521.0016.50------------1.00--------------------------------------------------------------------------------------------------------
.................................................................................TGGGCCCTGCCTAGGATAGGCTCTGCAGACCAG................................................................................................................................................................................331.000.00------------------------1.00--------------------------------------------------------------------------------------------
.....................TCCAGAACTCCACCAAGATCCT.......................................................................................................................................................................................................................................................2211.001.00--1.00------------------------------------------------------------------------------------------------------------------
...................................................................GGGTAGAGAGGGCATTAT.............................................................................................................................................................................................................181.000.00----------1.00----------------------------------------------------------------------------------------------------------
......................CCAGAACTCCACCAAGATCCTGCAGAAGAATA............................................................................................................................................................................................................................................321.000.00------------------------------------1.00--------------------------------------------------------------------------------
..............................................................................................................................................................................................TCTATTGTTATCCTTTGTT.................................................................................191.000.00--------------------------------------------------------------------------1.00------------------------------------------
...........................................................................................................................................................TGAGGGGAGAATGAGGTGGAAAGA...............................................................................................................2421.0011.50----1.00----------------------------------------------------------------------------------------------------------------
.....................................................................................................................................................TGGGAGTGAGGGGAGAATGAGGTGGA...................................................................................................................2611.001.001.00--------------------------------------------------------------------------------------------------------------------
...........................................................................................................................................................TGAGGGGAGAATGAGGTGGAAGA................................................................................................................2321.0011.50-----1.00---------------------------------------------------------------------------------------------------------------
..................................................................AGGGTAGAGAGGGCAAAGA.............................................................................................................................................................................................................191.000.00-------------------------------------------------------------1.00-------------------------------------------------------
........................................................................................TGCCTAGGATAGGCTCTGCAG.....................................................................................................................................................................................2111.001.00--------------------------------------1.00------------------------------------------------------------------------------
...........................................................................................................................................................TGAGGGGAGAATGAGGTGGATTT................................................................................................................2321.0011.50------------------------------------------------------------------1.00--------------------------------------------------
........................................................................GAGAGGGCATGGGCCGTT........................................................................................................................................................................................................181.000.00----------------------------------------1.00----------------------------------------------------------------------------
..................................................................................................................................................................................................................................................................AGAGACCTGGCTGTGCACATTGC.........2311.001.00-----------------------------------1.00---------------------------------------------------------------------------------
...............................................................TGGAGGGTAGAGAGGGCATGGGCCCGCCT......................................................................................................................................................................................................291.000.00----------------------------------------------------------1.00----------------------------------------------------------
...........................................................................................................................................................TGAGGGGAGAATGAGGTGGAGTT................................................................................................................2321.0016.50------------------------------------------------1.00--------------------------------------------------------------------
.......................................................................................................................................................................................................................................................TGAATCTGCTCAGAGACCTGGCT....................2321.001.00-------------0.50-----------------0.50-------------------------------------------------------------------------------------
...........................................................................................................................................................TGAGGGGAGAATGAGGTGGAGTTT...............................................................................................................2421.0016.50--1.00------------------------------------------------------------------------------------------------------------------
.......................................................................................................................................GTAGTTTGTCAAAGTGGGAG.......................................................................................................................................2011.001.00--------------1.00------------------------------------------------------------------------------------------------------
..........................................................................................................................................................GTGAGGGGAGAATGAGGTGGAGAA................................................................................................................241.000.00---1.00-----------------------------------------------------------------------------------------------------------------
...........................................................................................................................................................TGAGGGGAGAATGAGGTGGAGTAT...............................................................................................................2421.0016.50----1.00----------------------------------------------------------------------------------------------------------------
..................................................................................................................................................................AGAATGAGGTGGAGGGAAGCTGATAAA.....................................................................................................271.000.00-----------------------------------------------------------1.00---------------------------------------------------------
.......................CAGAACTCCACCAAGATCCTGCAGAAGAA..............................................................................................................................................................................................................................................2911.001.00-----------------------------------------------------------------1.00---------------------------------------------------
.......................................................................................................................................................................................................................................CCATTTCAGAATAACCTGAATA.....................................221.000.00-----1.00---------------------------------------------------------------------------------------------------------------
..................................................................................................................................................AAGTGGGAGTGAGGGGAGA.............................................................................................................................1911.001.00--------------------------------------------1.00------------------------------------------------------------------------
............................................................................................................................................................................................................................................................CTGCTCAGAGACCTGGCTGTGC................2220.500.50-------------------------------------------------------------------------------------------------0.50-------------------
..................................................................................................................................................................................................................................................................AGAGACCTGGCTGTGCACA.............1920.500.50--------------------------------------------------------------------------------0.50------------------------------------
...........................................................................................................................................................TGAGGGGAGAATGAGGTGGT...................................................................................................................2030.336.00--------------0.33------------------------------------------------------------------------------------------------------
...........................................................................................................................................................TGAGGGGAGAATGAGGTGGTGA.................................................................................................................2230.336.00--------------------------------------------------------------------------------0.33------------------------------------
...........................................................................................................................................................TGAGGGGAGAATGAGGTGAAT..................................................................................................................2130.335.67------------------------------------------------------------------------------------------------------------0.33--------
...........................................................................................................................................................TGAGGGGAGAATGAGGTGGTAT.................................................................................................................2230.336.00--------------------------------------------------------------------------------------------------------------0.33------
...........................................................................................................................................................TGAGGGGAGAATGAGGTGT....................................................................................................................1930.335.67-0.33-------------------------------------------------------------------------------------------------------------------
...........................................................................................................................................................TGAGGGGAGAATGAGGTAGC...................................................................................................................2050.202.20-----------------0.20---------------------------------------------------------------------------------------------------
...........................................................................................................................................................TGAGGGGAGAATGAGGTATC...................................................................................................................2050.202.20-----------------------------------0.20---------------------------------------------------------------------------------
................................................................GGAGGGTAGAGAGGGC..................................................................................................................................................................................................................1670.140.14---------------0.14-----------------------------------------------------------------------------------------------------

Antisense strand
ATGTGGAAGCAGTGAAAAAGCTCCAGAACTCCACCAAGATCCTGCAGAAGGTGATTTATTCCATGGAGGGTAGAGAGGGCATGGGCCCTGCCTAGGATAGGCTCTGCAGACTTGGTCTTCTGCCTAAACAGATGTGTAGTTTGTCAAAGTGGGAGTGAGGGGAGAATGAGGTGGAGGGAAGCTGATACTCTCTATTGTTATCCTTTCCATTTATCTACTGAGTTACCATATCCATTTCAGAATAACCTGAATCTGCTCAGAGACCTGGCTGTGCACATTGCCCATAGCCT
.......................................................................................................................................................((((((.((..((.(((((((((((((.........))))))))).)))).))..)).....((....))...........))))))....................................................
......................................................................................................................................................151......................................................................................240................................................
SizePerfect hitTotal NormPerfect NormSRR553572(SRX182778)
source: Frontal Cortex. (Frontal Cortex)
SRR039635(GSM518472)
THP1_nuc_sRNAs. (cell line)
GSM1105753INPUT(GSM1105753)
small RNA sequencing data. (hela)
DRR000556(DRX000314)
"THP-1 whole cell RNA, after 3 day treatment . (cell line)
SRR039636(GSM518473)
THP1_cyto_sRNAs. (cell line)
DRR000558(DRX000316)
"THP-1 whole cell RNA, after 3 day treatment . (cell line)
SRR387910(GSM843862)
antibody for ip: Ago2. (ago2 cell line)
SRR037944(GSM510482)
293DcrTN_cand5. (cell line)
SRR029124(GSM416753)
HeLa. (hela)
SRR330890(SRX091728)
tissue: skin psoriatic uninvolveddisease stat. (skin)
SRR037876(GSM522374)
fibroblasts_cell_culture. (fibroblast)
SRR094132(GSM651908)
small RNA(18-35nt)small RNA deep sequencing o. (uterus)
DRR000557(DRX000315)
"THP-1 whole cell RNA, after 3 day treatment . (cell line)
SRR039622(GSM531985)
HCV(+) Adjacent Tissue Sample. (liver)
SRR330859(SRX091697)
tissue: skin psoriatic involveddisease state:. (skin)
SRR330878(SRX091716)
tissue: skin psoriatic involveddisease state:. (skin)
SRR444060(SRX128908)
Sample 18cDNABarcode: AF-PP-340: ACG CTC TTC . (skin)
SRR039637(GSM518474)
THP1_total_sRNAs. (cell line)
DRR001488(DRX001042)
"Hela short nuclear cell fraction, LNA(+)". (hela)
SRR060983(GSM569187)
Human pre-germinal center B cell [09-001]. (cell line)
SRR342894(SRX096790)
small RNA seq of Right atrial tissue. (heart)
GSM450604(GSM450604)
miRNA sequencing raw reads from post-mortem s. (brain)
SRR444049(SRX128897)
Sample 9cDNABarcode: AF-PP-334: ACG CTC TTC C. (skin)
SRR189785SRR189779(GSM714639)
cell line: HEK293clip variant: PAR-CLIPenzyma. (cell line)
SRR553573(SRX182779)
source: Cerebellum. (Cerebellum)
SRR094131(GSM651907)
small RNA(18-35nt)small RNA deep sequencing o. (uterus)
SRR207111(GSM721073)
Whole cell RNA. (cell line)
SRR039614(GSM531977)
HBV-infected Liver Tissue. (liver)
SRR039615(GSM531978)
Severe Chronic Hepatitis B Liver Tissue. (liver)
DRR001489(DRX001043)
"Hela short nuclear cell fraction, control". (hela)
SRR342897(SRX096793)
small RNA seq of Left atrial tissue. (heart)
SRR207113(GSM721075)
IP against AGO 1 & 2. (ago1/2 cell line)
SRR040014(GSM532899)
G623N. (cervix)
SRR060986(GSM569190)
Human memory B cell [09-001]. (cell line)
SRR060169(GSM565979)
5-8F_cytoplasm. (cell line)
RoviraIPAgo2(Rovira)
total RNA. (ago2 breast)
SRR330872(SRX091710)
tissue: skin psoriatic involveddisease state:. (skin)
SRR330880(SRX091718)
tissue: skin psoriatic involveddisease state:. (skin)
SRR040018(GSM532903)
G701N. (cervix)
SRR040041(GSM532926)
G612T. (cervix)
SRR330912(SRX091750)
tissue: normal skindisease state: normal. (skin)
SRR191552(GSM715662)
42genomic small RNA (size selected RNA from t. (breast)
DRR000555(DRX000313)
"THP-1 whole cell RNA, no treatment". (cell line)
SRR040037(GSM532922)
G243T. (cervix)
SRR039190(GSM494809)
PBMCs were isolated by ficoll gradient from t. (blood)
SRR330863(SRX091701)
tissue: skin psoriatic involveddisease state:. (skin)
SRR330922(SRX091760)
tissue: normal skindisease state: normal. (skin)
SRR060984(GSM569188)
Human plasma cell [09-001]. (cell line)
SRR189782SRR015358(GSM380323)
NaÌøve B Cell (Naive39). (B cell)
SRR039617(GSM531980)
HBV(+) Adjacent Tissue Sample 1. (liver)
SRR330887(SRX091725)
tissue: skin psoriatic uninvolveddisease stat. (skin)
SRR033727(GSM497072)
HIV-positive DL (HIV412). (B cell)
SRR191549(GSM715659)
105genomic small RNA (size selected RNA from . (breast)
TAX577741(Rovira)
total RNA. (breast)
SRR330896(SRX091734)
tissue: skin psoriatic uninvolveddisease stat. (skin)
SRR037932(GSM510470)
293cand4_rep1. (cell line)
SRR189780(GSM714640)
cell line: HEK293clip variant: PAR-CLIPenzyma. (cell line)
SRR039193(GSM494812)
HL60 cell line is derived from acute promyelo. (cell line)
SRR015448(SRR015448)
cytoplasmic small RNAs. (breast)
SRR040038(GSM532923)
G531N. (cervix)
SRR189786SRR330915(SRX091753)
tissue: normal skindisease state: normal. (skin)
SRR191582(GSM715692)
95genomic small RNA (size selected RNA from t. (breast)
SRR342895(SRX096791)
small RNA seq of Left atrial tissue. (heart)
SRR038853(GSM458536)
MELB. (cell line)
SRR191572(GSM715682)
66genomic small RNA (size selected RNA from t. (breast)
SRR040020(GSM532905)
G699N_2. (cervix)
SRR040035(GSM532920)
G001T. (cervix)
SRR342896(SRX096792)
small RNA seq of Right atrial tissue. (heart)
SRR033729(GSM497074)
splenic MZL (Splenic414). (B cell)
SRR037933(GSM510471)
293cand4_rep2. (cell line)
SRR033711(GSM497056)
GCB DLBCL (GCB110). (B cell)
SRR189777(GSM714637)
cell line: HEK293clip variant: PAR-CLIPenzyma. (cell line)
SRR189781(GSM714641)
cell line: HEK293clip variant: PAR-CLIPenzyma. (cell line)
SRR038852(GSM458535)
QF1160MB. (cell line)
SRR207112(GSM721074)
RRP40 knockdown. (RRP40 cell line)
SRR033719(GSM497064)
6hr Activated B cell line (ABC158). (B cell)
SRR029054(GSM402329)
MCF7_smallRNAseq. (cell line)
GSM450609(GSM450609)
miRNA sequencing raw reads from post-mortem s. (brain)
SRR033720(GSM497065)
EBV activated B cell line (EBV159). (B cell)
DRR000559(DRX000317)
"THP-1 whole cell RNA, no treatment". (cell line)
SRR039625(GSM531988)
HBV(-) HCV(-) HCC Tissue Sample. (liver)
SRR207115(GSM721077)
XRN1&2 knockdown. (XRN1/XRN2 cell line)
SRR330889(SRX091727)
tissue: skin psoriatic uninvolveddisease stat. (skin)
GSM1105748AGO1(GSM1105748)
small RNA sequencing data. (ago1 hela)
SRR015446(SRR015446)
smallRNAs high-throughput sequencing Total. (breast)
SRR039620(GSM531983)
HBV(+) Adjacent Tissue Sample 2. (liver)
GSM450607(GSM450607)
miRNA sequencing raw reads from post-mortem s. (brain)
SRR330906(SRX091744)
tissue: normal skindisease state: normal. (skin)
SRR191586(GSM715696)
197genomic small RNA (size selected RNA from . (breast)
GSM532871(GSM532871)
G652N. (cervix)
SRR060985(GSM569189)
Human naive B cell [09-001]. (cell line)
SRR330923(SRX091761)
tissue: normal skindisease state: normal. (skin)
SRR330904(SRX091742)
tissue: normal skindisease state: normal. (skin)
SRR033726(GSM497071)
Mututated CLL (CLLM633). (B cell)
SRR095854(SRX039177)
"miRNA were isolated from FirstChoice Human B. (brain)
GSM450603(GSM450603)
miRNA sequencing raw reads from post-mortem s. (brain)
SRR040017(GSM532902)
G645T. (cervix)
GSM450608(GSM450608)
miRNA sequencing raw reads from post-mortem s. (brain)
SRR330902(SRX091740)
tissue: skin psoriatic uninvolveddisease stat. (skin)
SRR330920(SRX091758)
tissue: normal skindisease state: normal. (skin)
GSM450598(GSM450598)
miRNA sequencing raw reads from post-mortem s. (brain)
SRR330895(SRX091733)
tissue: skin psoriatic uninvolveddisease stat. (skin)
SRR060981(GSM569185)
Human centroblast [09-001]. (cell line)
SRR207114(GSM721076)
"IP against AGO 1 & 2, RRP40 knockdown". (ago1/2 RRP40 cell line)
SRR444043(SRX128891)
Sample 4cDNABarcode: AF-PP-339: ACG CTC TTC C. (skin)
SRR040028(GSM532913)
G026N. (cervix)
SRR033724(GSM497069)
L428 cell line (L428). (B cell)
TAX577744(Rovira)
total RNA. (breast)
SRR326282(GSM769512)
"Dicer mRNA was knocked down using siDicer, t. (cell line)
SRR033723(GSM497068)
L1236 cell line (L1236). (B cell)
TAX577745(Rovira)
total RNA. (breast)
SRR039611(GSM531974)
Human Normal Liver Tissue Sample 1. (liver)
SRR094130(GSM651906)
small RNA(18-35nt)small RNA deep sequencing o. (uterus)
SRR330893(SRX091731)
tissue: skin psoriatic uninvolveddisease stat. (skin)
...........GTGAAAAAGCTCCAGACC..................................................................................................................................................................................................................................................................... 182.000.00----------------2.00----------------------------------------------------------------------------------------------------
...........GTGAAAAAGCTCCAGAACC.................................................................................................................................................................................................................................................................... 192.000.00---------2.00-----------------------------------------------------------------------------------------------------------
...........GTGAAAAAGCTCCAGACCT.................................................................................................................................................................................................................................................................... 192.000.00----------------------2.00----------------------------------------------------------------------------------------------
.................................................................................................TAGGCTCTGCAGACTTGAAC............................................................................................................................................................................. 201.000.00------------------------1.00--------------------------------------------------------------------------------------------
.............................................................CATGGAGGGTAGAGATGC................................................................................................................................................................................................................... 181.000.00----------1.00----------------------------------------------------------------------------------------------------------
......................................................................................................................................................................................................................................................................ACCTGGCTGTGCACATTGTGTA...... 221.000.00--------------------------------------------------------------1.00------------------------------------------------------
..............AAAAAGCTCCAGAACGCC.................................................................................................................................................................................................................................................................. 181.000.00---------------------------------------------------------------------1.00-----------------------------------------------
..............................................................................................................................................................GGGGAGAATGAGGTGGAC.................................................................................................................. 181.000.00---------------------------------------------------------------------------1.00-----------------------------------------
..........................................................................................................................ACACATCTGTTTAGG......................................................................................................................................................... 1580.120.12----------------0.12----------------------------------------------------------------------------------------------------