ID: uc002hxq.2_intron_3_0_chr17_39913789_r
GENE: JUP(11)
chr17:39913739-39913935-


(1)
AGO2.ip 		(1)
BRAIN 		(7)
BREAST 		(8)
CELL-LINE 		(4)
CERVIX 		(7)
HEART 		(7)
HELA 		(4)
LIVER 		(1)
OTHER 		(44)
SKIN 		(1)
UTERUS 		(1)
XRN.ip

Sense strand
GGCCTCGGCCCCACTCATGGAGTTGCTGCACTCCCGCAACGAGGGCACTGGTGAGCTGGGGGAGGGCAGGAGGCTGGGTCCCACTCCCCCAGCCACGATGGAGGCTGGCCGACGTTTAACCTGGCTTTTCCTTTCCTCTCTGCTCAGCCACCTACGCTGCTGCCGTCCTGTTCCGCATCTCCGAGGACAAGAACCCA
...................................................(((((..((((((((.(((((((..(((...((((..((((((........))))))..)).))...)))..)))..)))).)))))))))))))...................................................
..................................................51..............................................................................................147................................................
SizePerfect hitTotal NormPerfect NormDRR001486(DRX001040)
"Hela long cytoplasmic cell fraction, LNA(+)". (hela)		DRR001485(DRX001039)
"Hela long total cell fraction, LNA(+)". (hela)		SRR342899(SRX096795)
small RNA seq of Left atrial tissue. (heart)		SRR330864(SRX091702)
tissue: skin psoriatic involveddisease state:. (skin)		SRR060169(GSM565979)
5-8F_cytoplasm. (cell line)		RoviraIPAgo2(Rovira)
total RNA. (ago2 breast)		SRR330874(SRX091712)
tissue: skin psoriatic involveddisease state:. (skin)		SRR037940(GSM510478)
293cand5_rep2. (cell line)		SRR039623(GSM531986)
HCV(+) HCC Tissue Sample. (liver)		SRR330872(SRX091710)
tissue: skin psoriatic involveddisease state:. (skin)		GSM1105753INPUT(GSM1105753)
small RNA sequencing data. (hela)		SRR330919(SRX091757)
tissue: normal skindisease state: normal. (skin)		SRR039622(GSM531985)
HCV(+) Adjacent Tissue Sample. (liver)		SRR207116(GSM721078)
Nuclear RNA. (cell line)		SRR342894(SRX096790)
small RNA seq of Right atrial tissue. (heart)		SRR330890(SRX091728)
tissue: skin psoriatic uninvolveddisease stat. (skin)		DRR001482(DRX001036)
"Hela long total cell fraction, control". (hela)		SRR330912(SRX091750)
tissue: normal skindisease state: normal. (skin)		SRR330888(SRX091726)
tissue: skin psoriatic uninvolveddisease stat. (skin)		SRR330903(SRX091741)
tissue: skin psoriatic uninvolveddisease stat. (skin)		SRR330887(SRX091725)
tissue: skin psoriatic uninvolveddisease stat. (skin)		SRR330896(SRX091734)
tissue: skin psoriatic uninvolveddisease stat. (skin)		TAX577742(Rovira)
total RNA. (breast)		SRR207115(GSM721077)
XRN1&2 knockdown. (XRN1/XRN2 cell line)		SRR189786SRR330866(SRX091704)
tissue: skin psoriatic involveddisease state:. (skin)		SRR330878(SRX091716)
tissue: skin psoriatic involveddisease state:. (skin)		SRR330920(SRX091758)
tissue: normal skindisease state: normal. (skin)		TAX577745(Rovira)
total RNA. (breast)		SRR330868(SRX091706)
tissue: skin psoriatic involveddisease state:. (skin)		SRR330861(SRX091699)
tissue: skin psoriatic involveddisease state:. (skin)		SRR330923(SRX091761)
tissue: normal skindisease state: normal. (skin)		SRR330867(SRX091705)
tissue: skin psoriatic involveddisease state:. (skin)		SRR330889(SRX091727)
tissue: skin psoriatic uninvolveddisease stat. (skin)		SRR330865(SRX091703)
tissue: skin psoriatic involveddisease state:. (skin)		SRR189784TAX577580(Rovira)
total RNA. (breast)		SRR330908(SRX091746)
tissue: normal skindisease state: normal. (skin)		SRR330857(SRX091695)
tissue: skin psoriatic involveddisease state:. (skin)		GSM532876(GSM532876)
G547T. (cervix)		SRR039190(GSM494809)
PBMCs were isolated by ficoll gradient from t. (blood)		SRR040028(GSM532913)
G026N. (cervix)		SRR342901(SRX096797)
small RNA seq of Left atrial tissue. (heart)		SRR330891(SRX091729)
tissue: skin psoriatic uninvolveddisease stat. (skin)		SRR330911(SRX091749)
tissue: normal skindisease state: normal. (skin)		SRR330904(SRX091742)
tissue: normal skindisease state: normal. (skin)		SRR330871(SRX091709)
tissue: skin psoriatic involveddisease state:. (skin)		SRR330915(SRX091753)
tissue: normal skindisease state: normal. (skin)		SRR342895(SRX096791)
small RNA seq of Left atrial tissue. (heart)		SRR342897(SRX096793)
small RNA seq of Left atrial tissue. (heart)		TAX577453(Rovira)
total RNA. (breast)		SRR039619(GSM531982)
HBV(+) HCC Tissue Sample 1. (liver)		SRR342896(SRX096792)
small RNA seq of Right atrial tissue. (heart)		SRR330895(SRX091733)
tissue: skin psoriatic uninvolveddisease stat. (skin)		SRR330859(SRX091697)
tissue: skin psoriatic involveddisease state:. (skin)		DRR001487(DRX001041)
"Hela long nuclear cell fraction, LNA(+)". (hela)		SRR330885(SRX091723)
tissue: skin psoriatic uninvolveddisease stat. (skin)		SRR330880(SRX091718)
tissue: skin psoriatic involveddisease state:. (skin)		SRR040034(GSM532919)
G001N. (cervix)		SRR029054(GSM402329)
MCF7_smallRNAseq. (cell line)		SRR330873(SRX091711)
tissue: skin psoriatic involveddisease state:. (skin)		SRR330883(SRX091721)
tissue: skin psoriatic uninvolveddisease stat. (skin)		SRR039625(GSM531988)
HBV(-) HCV(-) HCC Tissue Sample. (liver)		SRR330892(SRX091730)
tissue: skin psoriatic uninvolveddisease stat. (skin)		GSM450601(GSM450601)
miRNA sequencing raw reads from post-mortem s. (brain)		SRR330863(SRX091701)
tissue: skin psoriatic involveddisease state:. (skin)		SRR330922(SRX091760)
tissue: normal skindisease state: normal. (skin)		SRR330898(SRX091736)
tissue: skin psoriatic uninvolveddisease stat. (skin)		SRR330875(SRX091713)
tissue: skin psoriatic involveddisease state:. (skin)		TAX577741(Rovira)
total RNA. (breast)		SRR040038(GSM532923)
G531N. (cervix)		DRR001489(DRX001043)
"Hela short nuclear cell fraction, control". (hela)		DRR001483(DRX001037)
"Hela long cytoplasmic cell fraction, control. (hela)		SRR342900(SRX096796)
small RNA seq of Right atrial tissue. (heart)		TAX577579(Rovira)
total RNA. (breast)		SRR330870(SRX091708)
tissue: skin psoriatic involveddisease state:. (skin)		SRR330860(SRX091698)
tissue: skin psoriatic involveddisease state:. (skin)		SRR330902(SRX091740)
tissue: skin psoriatic uninvolveddisease stat. (skin)		SRR037939(GSM510477)
293cand5_rep1. (cell line)		SRR326280(GSM769510)
total cell content of unperturbed cells was s. (cell line)		GSM956925Paz8D5(GSM956925)
"cell line: HEK293 cell linepassages: 15-20ip. (cell line)		SRR330893(SRX091731)
tissue: skin psoriatic uninvolveddisease stat. (skin)		SRR330917(SRX091755)
tissue: normal skindisease state: normal. (skin)		SRR094131(GSM651907)
small RNA(18-35nt)small RNA deep sequencing o. (uterus)		SRR444060(SRX128908)
Sample 18cDNABarcode: AF-PP-340: ACG CTC TTC . (skin)		SRR330901(SRX091739)
tissue: skin psoriatic uninvolveddisease stat. (skin)
..................................................GTGAGCTGGGGGAGGGCAGGAGGCTGGGTCCCACTCCCCCAGCCACGATGGAGGCTGGCCGACGTTTAACCTGGCTTTTCCTTTCCTCTCTGCTCAGT.................................................98129.006.0014.0012.00-----------------------------------------------------2.00----------------1.00-------------
.............................................................................................................................................................................CGCATCTCCGAGGACAAG......18110.0010.00-------5.002.00---2.00-----------------------------------------------------------------1.00-------
....................................................................................................................................................................................CCGAGGACAAGAACC..1519.009.00--1.00-----------1.00--1.00--1.00--------2.00----------------2.00-----------------------------1.00---------
..................................................GTGAGCTGGGGGAGGGCAGGAGGCTGGGT......................................................................................................................2919.009.00---------2.00------------1.00-----2.00---1.00-1.00------------1.00--1.00-----------------------------------
..................................................GTGAGCTGGGGGAGGGCAGGAGGCTGGGTC.....................................................................................................................3019.009.00-----------1.00-----1.00-1.00-------1.001.00---------------1.00-----1.00--1.00---------------------1.00----------
..................................................GTGAGCTGGGGGAGGGCAGGAGGCTGGGTCC....................................................................................................................3116.006.00--------------------------1.001.00-----1.00---1.001.00-----1.00-----------------------------------------
..................................................GTGAGCTGGGGGAGGGCAGGAGGCTGGGTCCCACTCCCCCAGCCACGATGGAGGCTGGCCGACGTTTAACCTGGCTTTTCCTTTCCTCTCTGCTCAG..................................................9716.006.006.00-------------------------------------------------------------------------------------
..................................................GTGAGCTGGGGGAGGGCAGGAGGCTGGGTCCCACTCCCCCAGCCACGATGGAGGCTGGCCGACGTTTAACCTGGCTTTTCCTTTCCTCTCTGCTCAGTT................................................9915.006.00-4.00--------------1.00---------------------------------------------------------------------
..............................................................................................................................................................................GCATCTCCGAGGACAAGAACC..2115.005.00--3.00-----------1.00---------------------------1.00-------------------------------------------
.............................................................................................................................TTTTCCTTTCCTCTCTGCTCAGT.................................................2315.001.00------------------1.00-2.00----1.00----------------------1.00-------------------------------------
..................................................GTGAGCTGGGGGAGGGCAGGAGGC...........................................................................................................................2414.004.00--1.001.00-1.00---1.00----------------------------------------------------------------------------
...............................................................................................................................................................................CATCTCCGAGGACAAGAACC..2014.004.00--1.00----------3.00------------------------------------------------------------------------
..............................................................................................................................TTTCCTTTCCTCTCTGCTCAGT.................................................224.000.00-----------------1.00---------------------------1.00------2.00---------------------------------
..................................................GTGAGCTGGGGGAGGGCAGGAGGCTGGG.......................................................................................................................2813.003.00---2.00----------------------1.00-----------------------------------------------------------
..................................................GTGAGCTGGGGGAGGGCAGGAGGCTG.........................................................................................................................2613.003.00-----------------------1.00-------------------------1.00-----------------1.00------------------
..................................................GTGAGCTGGGGGAGGGCAGGAGGCT..........................................................................................................................2513.003.00---------------------1.00----1.00----------------------------------1.00------------------------
...............................................................................................CGATGGAGGCTGGCCGACG...................................................................................1913.003.00----3.00---------------------------------------------------------------------------------
..............................................................................................ACGATGGAGGCTGGCCG......................................................................................1713.003.00----------------------1.00---------------------------------------------------1.00--1.00--------
...............................................................................................................................TTCCTTTCCTCTCTGCTCAGT.................................................213.000.00--------------1.00----------------------------------1.00----1.00-------------------------------
.........................................................................................................................................................................GTTCCGCATCTCCGAGGACAAG......2213.003.00--------1.00---2.00-------------------------------------------------------------------------
..............................................................................................ACGATGGAGGCTGGCCGAC....................................................................................1913.003.00-----------1.00------1.00--------------------------------1.00----------------------------------
..............................................................................................................................TTTCCTTTCCTCTCTGCTCAGTT................................................233.000.00----------3.00---------------------------------------------------------------------------
..................................................GTGAGCTGGGGGAGGGCAGGAGGCTGGGTCCCACTCCCCCAGCCACGATGGAGGCTGGCCGACGTTTAACCTGGCTTTTCCTTTCCTCTCTGCTCAGC.................................................9812.002.00-2.00------------------------------------------------------------------------------------
..............................................................................................ACGATGGAGGCTGGCCGA.....................................................................................1812.002.00--------------------------------1.00------------------1.00----------------------------------
......................................................................................................................ACCTGGCTTTTCCTTTCCTCTCTGCTCAGT.................................................302.000.00------------------------1.00-----------------------------------------1.00-------------------
..............................................................................................................................................................................GCATCTCCGAGGACAAGAACCC.2212.002.00---------------2.00----------------------------------------------------------------------
............................................................................................................................CTTTTCCTTTCCTCTCTGCTCAGT.................................................242.000.00-------------------1.00-----------1.00------------------------------------------------------
..................................................................................................................................................................................CTCCGAGGACAAGAAC...1612.002.00--1.00----------------------------------------------------------------------------1.00------
.........................................................................CTGGGTCCCACTCCCCCAGCCACGATGGAGGCTGGCCGACGTTTAACCTGGCTTTTCCTTTCCTCTCTGCTCAGT.................................................752.000.00----------------2.00---------------------------------------------------------------------
..................................................GTGAGCTGGGGGAGGGCAGGT..............................................................................................................................2112.001.00-----------------------2.00--------------------------------------------------------------
........................................................................................................................CTGGCTTTTCCTTTCCTCTCTGCTCAGT.................................................282.000.00-------------------1.00-------------------------------------------1.00----------------------
...............................................................................................................................................................................CATCTCCGAGGACAAGA.....1712.002.00---1.00-------1.00--------------------------------------------------------------------------
....................................................................................................................................................................................CCGAGGACAAGAACCC.1612.002.00------------------------------------------------------1.00------------------1.00------------
....................................................................................................................TAACCTGGCTTTTCCTTTCCTCTCTGCTCAG..................................................3112.002.00------2.00-------------------------------------------------------------------------------
.....................................................................................................................................................................................CGAGGACAAGAACCC.1521.501.50--0.50-----------0.50--------------0.50--------------------------------------------------------
..................................................................................................................................CTTTCCTCTCTGCTCAGTT................................................1961.170.17---------0.33-----0.33---------------0.17--------------------------------------------------0.33---
.....................................................................................................................AACCTGGCTTTTCCTTTCCTCTCTGCTCAGT.................................................311.000.00-------------------------------------------1.00------------------------------------------
..................................................GTGAGCTGGGGGAGGGCAGGAGGCTGGGTCCCACTCCCCCAGCCACGATGGAGGCTGGCCGACGTTTAACCTGGC........................................................................7511.001.00-1.00------------------------------------------------------------------------------------
.............................................................................................................................TTTTCCTTTCCTCTCTGCTCAG..................................................2211.001.00------------------------------------------1.00-------------------------------------------
...............................................................................................................................................................CTGCCGTCCTGTTCCGCATCTCCGAGGACA........3011.001.00-------------------------------------------1.00------------------------------------------
...........................................................................GGGTCCCACTCCCCCAGCCACGC...................................................................................................231.000.00---------------------------------------1.00----------------------------------------------
..................................................................................................................................................GCCACCTACGCTGCTGCCGTCCTGTTCCGC.....................3011.001.00------1.00-------------------------------------------------------------------------------
............................................................................................................................................................................CCGCATCTCCGAGGACAAGAAC...2211.001.00-------------1.00------------------------------------------------------------------------
...............................................................................................CGATGGAGGCTGGCCGACGTTT................................................................................2211.001.00----1.00---------------------------------------------------------------------------------
..................................................GTGAGCTGGGGGAGGGCAGGAGGCTGGGTCCC...................................................................................................................3211.001.00------------------------------------1.00-------------------------------------------------
.............................................................................................................................................................................CGCATCTCCGAGGACAAAAA....201.000.00-----------------------------------------------------------------1.00--------------------
............................................................................................................................CTTTTCCTTTCCTCTCTGCTCAGTT................................................251.000.00--------------------------------------1.00-----------------------------------------------
..................................................GTGAGCTGGGGGAGGGCAGGAGGCTGGGCCCC...................................................................................................................3211.003.00------------------------1.00-------------------------------------------------------------
..................................................GTGAGCTGGGGGAGGGCAGGAGGCTGGT.......................................................................................................................2811.001.00---1.00----------------------------------------------------------------------------------
..............................................................................................................................................................GCTGCCGTCCTGTTCCGCATCTCCGCG............271.000.00----------------------------------------1.00---------------------------------------------
.............................................................................................CACGATGGAGGCTGGCCGA.....................................................................................1911.001.00----1.00---------------------------------------------------------------------------------
................ATGGAGTTGCTGCACTTTAG.................................................................................................................................................................201.000.00-----------------------------------1.00--------------------------------------------------
..................................................GTGAGCTGGGGGAGGGCAGGA..............................................................................................................................2111.001.00----------------------------------------1.00---------------------------------------------
.......................................................................................................GCTGGCCGACGTTTAACCTGGC........................................................................2211.001.00----------1.00---------------------------------------------------------------------------
..................................................GTGAGCTGGGGGAGGGCAGGAGGCTGGGTCCG...................................................................................................................3211.006.00--------------------------------------------------------------1.00-----------------------
.................................CCGCAACGAGGGCACTGCC.................................................................................................................................................1911.001.00-----1.00--------------------------------------------------------------------------------
............................................................................................................................................................................CCGCATCTCCGAGGACAAGAA....2111.001.00-------------------------1.00------------------------------------------------------------
..............................................................................................................................................................................GCATCTCCGAGGACAAG......1711.001.00-------------------------------------1.00------------------------------------------------
............ACTCATGGAGTTGCTGC........................................................................................................................................................................1711.001.00---------------------------------------------------------1.00----------------------------
..................................................GTGAGCTGGGGGAGGG...................................................................................................................................1601.001.00--------------------------------------------------------------------------------1.00-----
..................................................GTGAGCTGGGGGAGGGCAGG...............................................................................................................................2011.001.00-------------------------------1.00------------------------------------------------------
.........................................................................................................................................................................GTTCCGCATCTCCGAGG...........1711.001.00-----------------------------------------------1.00--------------------------------------
...................................................................................................................................TTTCCTCTCTGCTCAGTTTT..............................................201.000.00---------------------------1.00----------------------------------------------------------
..................................................GTGAGCTGGGGGAGGGCAGGAGGCTGGGTCCCACTCCCCCAGCCACGATGGAGGCTGGCCGACGTTTAACCTGGCTTTTCCTTTCCTCTCTGCTCAGTTTT..............................................10111.006.00-1.00------------------------------------------------------------------------------------
..................................................GTGAGCTGGGGGAGGGCAGGAGG............................................................................................................................2311.001.00-----------------------------------------1.00--------------------------------------------
.............................................................GAGGGCAGGAGGCTGGAGAG....................................................................................................................201.000.00----------------------------------------------------------------------1.00---------------
...........................GCACTCCCGCAACGAG..........................................................................................................................................................1611.001.00------1.00-------------------------------------------------------------------------------
..................................................................................................................TTTAACCTGGCTTTTCCTTTCCT............................................................2311.001.00--------------------------------------------------------1.00-----------------------------
.............................................................................................................................................................................CGCATCTCCGAGGACAAGAA....2011.001.00-----------------------------------------------------------------------1.00--------------
.............................................................................................................................TTTTCCTTTCCTCTCTGCTCAGA.................................................2311.001.00--------------------------------------------------------------------1.00-----------------
.................................................................................................................................................AGCCACCTACGCTGCTC...................................171.000.00---------------------------------------------------------------------1.00----------------
..................................................................................................................................................................................CTCCGAGGACAAGAACC..1711.001.00--1.00-----------------------------------------------------------------------------------
.............................................................................................................CGACGTTTAACCTGGCTTTTCCTTTCCTCTCTG.......................................................3311.001.00-----1.00--------------------------------------------------------------------------------
..................................................GTGAGCTGGGGGAGGGCAGGAG.............................................................................................................................2211.001.00---1.00----------------------------------------------------------------------------------
..................................................................................................................................................GCCACCTACGCTGCTGCCGTCCT............................2311.001.00--------1.00-----------------------------------------------------------------------------
............................................................................................CCACGATGGAGGCTGGCCG......................................................................................1911.001.00-----------------------------------------------------1.00--------------------------------
..................................................GTGAGCTGGGGGAGGGCAGGAGGCTGGGCC.....................................................................................................................3011.003.00------------------------1.00-------------------------------------------------------------
..................................................................................................................................................................CCGTCCTGTTCCGCATCTCCGA.............2211.001.00-------------------------1.00------------------------------------------------------------
.................................................................................................................................CCTTTCCTCTCTGCTCAGTT................................................201.000.00------------------------------------------------------------1.00-------------------------
.................................................................................................................................................................................TCTCCGAGGACAAGAA....1611.001.00------------------------------1.00-------------------------------------------------------
........................................................................................................................................................TACGCTGCTGCCGTCCT............................1711.001.00---------------1.00----------------------------------------------------------------------
.................................CCGCAACGAGGGCACTG...................................................................................................................................................1711.001.00----------------------------------1.00---------------------------------------------------
................................................................................................................................................................................ATCTCCGAGGACAAGAAC...1811.001.00---------------------------------1.00----------------------------------------------------
...........................................................................................GCCACGATGGAGGCTGGCCGACGTTTA...............................................................................2711.001.00------------------------------1.00-------------------------------------------------------
..................................................GTGAGCTGGGGGAGGGCAGGAGGCTGGGTCA....................................................................................................................3111.009.00---------------------1.00----------------------------------------------------------------
.....................................................................................CCCCCAGCCACGATGGAGG.............................................................................................1911.001.00------------------1.00-------------------------------------------------------------------
..................................................................................................................TTTAACCTGGCTTTTCCTTTCCTCTCT........................................................2711.001.00-----------------------------------1.00--------------------------------------------------
..................................................GTGAGCTGGGGGAGGGCAGGAGGCTGG........................................................................................................................2711.001.00---------------------1.00----------------------------------------------------------------
.................................................................................CACTCCCCCAGCCACGATGGAGG.............................................................................................2311.001.00-----------1.00--------------------------------------------------------------------------
..................................................GTGAGCTGGGGGAGGGCA.................................................................................................................................1821.001.00--------------------------------------------------------0.50------------------------0.50----
..................................................................CAGGAGGCTGGGTCCCACTCCCCCAG.........................................................................................................2611.001.00-----1.00--------------------------------------------------------------------------------
...............................................................................................................................................................CTGCCGTCCTGTTCCGCATCTCCGAGGAC.........2911.001.00-----1.00--------------------------------------------------------------------------------
.................................................................................CACTCCCCCAGCCACGA...................................................................................................1711.001.00---------------------------------------1.00----------------------------------------------
....................................................................................................................................................................GTCCTGTTCCGCATCTCC...............1811.001.00------------------------------------------------1.00-------------------------------------
...............................................................................................CGATGGAGGCTGGCCGAC....................................................................................1811.001.00----1.00---------------------------------------------------------------------------------
...........................................................................................................................................................................TCCGCATCTCCGAGGACAAG......2011.001.00--------1.00-----------------------------------------------------------------------------
...................................................................................................................................................CCACCTACGCTGCTGC..................................1611.001.00---------------------------------------------1.00----------------------------------------
......................................................................................................................................................................CCTGTTCCGCATCTCCGAGG...........2011.001.00------1.00-------------------------------------------------------------------------------
...................................GCAACGAGGGCACTG...................................................................................................................................................1540.250.25------------------------------0.25-------------------------------------------------------
.........................................................GGGGGAGGGCAGGAGGCT..........................................................................................................................1850.200.20-----------------------------------------------------------------------------------0.20--
..................................................GTGAGCTGGGGGAGGGC..................................................................................................................................1750.200.20------------------------------------------------------------------------------------0.20-
..................................................................................................................................CTTTCCTCTCTGCTCAG..................................................1760.170.17-------------------------------------------------------------------------------------0.17
.................................................................................................................................CCTTTCCTCTCTGCTCA...................................................1770.140.14---------------------------------------------------------0.14----------------------------

Antisense strand
GGCCTCGGCCCCACTCATGGAGTTGCTGCACTCCCGCAACGAGGGCACTGGTGAGCTGGGGGAGGGCAGGAGGCTGGGTCCCACTCCCCCAGCCACGATGGAGGCTGGCCGACGTTTAACCTGGCTTTTCCTTTCCTCTCTGCTCAGCCACCTACGCTGCTGCCGTCCTGTTCCGCATCTCCGAGGACAAGAACCCA
...................................................(((((..((((((((.(((((((..(((...((((..((((((........))))))..)).))...)))..)))..)))).)))))))))))))...................................................
..................................................51..............................................................................................147................................................
SizePerfect hitTotal NormPerfect NormDRR001486(DRX001040)
"Hela long cytoplasmic cell fraction, LNA(+)". (hela)		DRR001485(DRX001039)
"Hela long total cell fraction, LNA(+)". (hela)		SRR342899(SRX096795)
small RNA seq of Left atrial tissue. (heart)		SRR330864(SRX091702)
tissue: skin psoriatic involveddisease state:. (skin)		SRR060169(GSM565979)
5-8F_cytoplasm. (cell line)		RoviraIPAgo2(Rovira)
total RNA. (ago2 breast)		SRR330874(SRX091712)
tissue: skin psoriatic involveddisease state:. (skin)		SRR037940(GSM510478)
293cand5_rep2. (cell line)		SRR039623(GSM531986)
HCV(+) HCC Tissue Sample. (liver)		SRR330872(SRX091710)
tissue: skin psoriatic involveddisease state:. (skin)		GSM1105753INPUT(GSM1105753)
small RNA sequencing data. (hela)		SRR330919(SRX091757)
tissue: normal skindisease state: normal. (skin)		SRR039622(GSM531985)
HCV(+) Adjacent Tissue Sample. (liver)		SRR207116(GSM721078)
Nuclear RNA. (cell line)		SRR342894(SRX096790)
small RNA seq of Right atrial tissue. (heart)		SRR330890(SRX091728)
tissue: skin psoriatic uninvolveddisease stat. (skin)		DRR001482(DRX001036)
"Hela long total cell fraction, control". (hela)		SRR330912(SRX091750)
tissue: normal skindisease state: normal. (skin)		SRR330888(SRX091726)
tissue: skin psoriatic uninvolveddisease stat. (skin)		SRR330903(SRX091741)
tissue: skin psoriatic uninvolveddisease stat. (skin)		SRR330887(SRX091725)
tissue: skin psoriatic uninvolveddisease stat. (skin)		SRR330896(SRX091734)
tissue: skin psoriatic uninvolveddisease stat. (skin)		TAX577742(Rovira)
total RNA. (breast)		SRR207115(GSM721077)
XRN1&2 knockdown. (XRN1/XRN2 cell line)		SRR189786SRR330866(SRX091704)
tissue: skin psoriatic involveddisease state:. (skin)		SRR330878(SRX091716)
tissue: skin psoriatic involveddisease state:. (skin)		SRR330920(SRX091758)
tissue: normal skindisease state: normal. (skin)		TAX577745(Rovira)
total RNA. (breast)		SRR330868(SRX091706)
tissue: skin psoriatic involveddisease state:. (skin)		SRR330861(SRX091699)
tissue: skin psoriatic involveddisease state:. (skin)		SRR330923(SRX091761)
tissue: normal skindisease state: normal. (skin)		SRR330867(SRX091705)
tissue: skin psoriatic involveddisease state:. (skin)		SRR330889(SRX091727)
tissue: skin psoriatic uninvolveddisease stat. (skin)		SRR330865(SRX091703)
tissue: skin psoriatic involveddisease state:. (skin)		SRR189784TAX577580(Rovira)
total RNA. (breast)		SRR330908(SRX091746)
tissue: normal skindisease state: normal. (skin)		SRR330857(SRX091695)
tissue: skin psoriatic involveddisease state:. (skin)		GSM532876(GSM532876)
G547T. (cervix)		SRR039190(GSM494809)
PBMCs were isolated by ficoll gradient from t. (blood)		SRR040028(GSM532913)
G026N. (cervix)		SRR342901(SRX096797)
small RNA seq of Left atrial tissue. (heart)		SRR330891(SRX091729)
tissue: skin psoriatic uninvolveddisease stat. (skin)		SRR330911(SRX091749)
tissue: normal skindisease state: normal. (skin)		SRR330904(SRX091742)
tissue: normal skindisease state: normal. (skin)		SRR330871(SRX091709)
tissue: skin psoriatic involveddisease state:. (skin)		SRR330915(SRX091753)
tissue: normal skindisease state: normal. (skin)		SRR342895(SRX096791)
small RNA seq of Left atrial tissue. (heart)		SRR342897(SRX096793)
small RNA seq of Left atrial tissue. (heart)		TAX577453(Rovira)
total RNA. (breast)		SRR039619(GSM531982)
HBV(+) HCC Tissue Sample 1. (liver)		SRR342896(SRX096792)
small RNA seq of Right atrial tissue. (heart)		SRR330895(SRX091733)
tissue: skin psoriatic uninvolveddisease stat. (skin)		SRR330859(SRX091697)
tissue: skin psoriatic involveddisease state:. (skin)		DRR001487(DRX001041)
"Hela long nuclear cell fraction, LNA(+)". (hela)		SRR330885(SRX091723)
tissue: skin psoriatic uninvolveddisease stat. (skin)		SRR330880(SRX091718)
tissue: skin psoriatic involveddisease state:. (skin)		SRR040034(GSM532919)
G001N. (cervix)		SRR029054(GSM402329)
MCF7_smallRNAseq. (cell line)		SRR330873(SRX091711)
tissue: skin psoriatic involveddisease state:. (skin)		SRR330883(SRX091721)
tissue: skin psoriatic uninvolveddisease stat. (skin)		SRR039625(GSM531988)
HBV(-) HCV(-) HCC Tissue Sample. (liver)		SRR330892(SRX091730)
tissue: skin psoriatic uninvolveddisease stat. (skin)		GSM450601(GSM450601)
miRNA sequencing raw reads from post-mortem s. (brain)		SRR330863(SRX091701)
tissue: skin psoriatic involveddisease state:. (skin)		SRR330922(SRX091760)
tissue: normal skindisease state: normal. (skin)		SRR330898(SRX091736)
tissue: skin psoriatic uninvolveddisease stat. (skin)		SRR330875(SRX091713)
tissue: skin psoriatic involveddisease state:. (skin)		TAX577741(Rovira)
total RNA. (breast)		SRR040038(GSM532923)
G531N. (cervix)		DRR001489(DRX001043)
"Hela short nuclear cell fraction, control". (hela)		DRR001483(DRX001037)
"Hela long cytoplasmic cell fraction, control. (hela)		SRR342900(SRX096796)
small RNA seq of Right atrial tissue. (heart)		TAX577579(Rovira)
total RNA. (breast)		SRR330870(SRX091708)
tissue: skin psoriatic involveddisease state:. (skin)		SRR330860(SRX091698)
tissue: skin psoriatic involveddisease state:. (skin)		SRR330902(SRX091740)
tissue: skin psoriatic uninvolveddisease stat. (skin)		SRR037939(GSM510477)
293cand5_rep1. (cell line)		SRR326280(GSM769510)
total cell content of unperturbed cells was s. (cell line)		GSM956925Paz8D5(GSM956925)
"cell line: HEK293 cell linepassages: 15-20ip. (cell line)		SRR330893(SRX091731)
tissue: skin psoriatic uninvolveddisease stat. (skin)		SRR330917(SRX091755)
tissue: normal skindisease state: normal. (skin)		SRR094131(GSM651907)
small RNA(18-35nt)small RNA deep sequencing o. (uterus)		SRR444060(SRX128908)
Sample 18cDNABarcode: AF-PP-340: ACG CTC TTC . (skin)		SRR330901(SRX091739)
tissue: skin psoriatic uninvolveddisease stat. (skin)
...........................................................................................................................GCTTTTCCTTTCCTCTTGT....................................................... 191.000.00----------------------------------------------------------1.00---------------------------
..................................................GTGAGCTGGGGGAGGGTT................................................................................................................................. 181.000.00---------1.00----------------------------------------------------------------------------
.........................................................GGGGGAGGGCAGGAGGCC.......................................................................................................................... 181.000.00-----------------------------------------1.00--------------------------------------------
..................................................................................ACTCCCCCAGCCACGATTA................................................................................................ 191.000.00----------------------------------------------------------------1.00---------------------
.....................................................................GAGGCTGGGTCCCACTAA.............................................................................................................. 181.000.00-----------------------------------------------------------1.00--------------------------
..............................................................................................................................................CTCAGCCACCTACGCTA...................................... 171.000.00------------------------------------1.00-------------------------------------------------
..............................................................................................................................................CTCAGCCACCTACGCTTG..................................... 181.000.00----------------------1.00---------------------------------------------------------------