ID: uc002hux.2_intron_9_0_chr17_38802100_r.5p
GENE: SMARCE1(1)
chr17:38803825-38804074-


(1)
AGO2.ip 		(14)
B-CELL 		(1)
BRAIN 		(14)
BREAST 		(33)
CELL-LINE 		(15)
CERVIX 		(1)
FIBROBLAST 		(6)
HEART 		(3)
HELA 		(4)
LIVER 		(2)
OTHER 		(1)
RRP40.ip 		(24)
SKIN 		(1)
TESTES 		(1)
UTERUS 		(1)
XRN.ip

Sense strand
GGGACAAAGGGAAGCGAAGCCGGAGCTGCGGGCGCTTTTTCTGCCCGCGGGTGAGTGTTTCCAAGTGGGACGGACCGGGTCGGTGGGTGCAAGTCGTGGTGTCCCCGCTTGGCTAGACCCCGAGTTCCCGGGGGTTGCTGGGGTTCAGCCTTGGCCGTGGGGCCAGAGCCAGGAGCCGGTTGAGGCCTCCTTGAGGCCTAGCAGAGCGAGGGTTGGGAGGGAGTCCCATCTGGGGCCCCCTCCTTGGAGG
........................................................................((((((.((.(((((..((........))..)))))..((((..(((((.(((.((....))..))))))))..)))).(((((....))))).......)).)))))).....................................................................
..................................................................67...................................................................................................................184................................................................
SizePerfect hitTotal NormPerfect NormSRR037937(GSM510475)
293cand2. (cell line)		SRR207110(GSM721072)
Nuclear RNA. (cell line)		GSM532876(GSM532876)
G547T. (cervix)		SRR553572(SRX182778)
source: Frontal Cortex. (Frontal Cortex)		SRR033728(GSM497073)
MALT (MALT413). (B cell)		SRR207116(GSM721078)
Nuclear RNA. (cell line)		SRR033729(GSM497074)
splenic MZL (Splenic414). (B cell)		SRR037944(GSM510482)
293DcrTN_cand5. (cell line)		SRR033710(GSM497055)
GCB DLBCL (GCB385). (B cell)		RoviraIPAgo2(Rovira)
total RNA. (ago2 breast)		SRR553573(SRX182779)
source: Cerebellum. (Cerebellum)		SRR033727(GSM497072)
HIV-positive DL (HIV412). (B cell)		SRR039193(GSM494812)
HL60 cell line is derived from acute promyelo. (cell line)		TAX577743(Rovira)
total RNA. (breast)		SRR033719(GSM497064)
6hr Activated B cell line (ABC158). (B cell)		SRR037936(GSM510474)
293cand1. (cell line)		SRR444049(SRX128897)
Sample 9cDNABarcode: AF-PP-334: ACG CTC TTC C. (skin)		SRR033720(GSM497065)
EBV activated B cell line (EBV159). (B cell)		SRR039635(GSM518472)
THP1_nuc_sRNAs. (cell line)		SRR207115(GSM721077)
XRN1&2 knockdown. (XRN1/XRN2 cell line)		SRR444044(SRX128892)
Sample 5cDNABarcode: AF-PP-340: ACG CTC TTC C. (skin)		SRR207111(GSM721073)
Whole cell RNA. (cell line)		DRR000556(DRX000314)
"THP-1 whole cell RNA, after 3 day treatment . (cell line)		SRR330903(SRX091741)
tissue: skin psoriatic uninvolveddisease stat. (skin)		SRR191630(GSM715740)
70genomic small RNA (size selected RNA from t. (breast)		TAX577739(Rovira)
total RNA. (breast)		SRR189779(GSM714639)
cell line: HEK293clip variant: PAR-CLIPenzyma. (cell line)		SRR444052(SRX128900)
Sample 12cDNABarcode: AF-PP-340: ACG CTC TTC . (skin)		SRR038859(GSM458542)
MM386. (cell line)		SRR330874(SRX091712)
tissue: skin psoriatic involveddisease state:. (skin)		SRR033713(GSM497058)
Burkitt Lymphoma (BL115). (B cell)		SRR330877(SRX091715)
tissue: skin psoriatic involveddisease state:. (skin)		SRR060168(GSM565978)
5-8F_nucleus. (cell line)		SRR039622(GSM531985)
HCV(+) Adjacent Tissue Sample. (liver)		SRR033730(GSM497075)
Lymphoblastic (ALL411). (B cell)		SRR040020(GSM532905)
G699N_2. (cervix)		SRR039619(GSM531982)
HBV(+) HCC Tissue Sample 1. (liver)		SRR038854(GSM458537)
MM653. (cell line)		SRR038860(GSM458543)
MM426. (cell line)		SRR342897(SRX096793)
small RNA seq of Left atrial tissue. (heart)		SRR342900(SRX096796)
small RNA seq of Right atrial tissue. (heart)		SRR342899(SRX096795)
small RNA seq of Left atrial tissue. (heart)		SRR330867(SRX091705)
tissue: skin psoriatic involveddisease state:. (skin)		DRR001488(DRX001042)
"Hela short nuclear cell fraction, LNA(+)". (hela)		SRR330921(SRX091759)
tissue: normal skindisease state: normal. (skin)		SRR330865(SRX091703)
tissue: skin psoriatic involveddisease state:. (skin)		SRR039616(GSM531979)
HBV(+) Distal Tissue Sample 1. (liver)		SRR040018(GSM532903)
G701N. (cervix)		SRR330912(SRX091750)
tissue: normal skindisease state: normal. (skin)		SRR094129(GSM651905)
small RNA(18-35nt)small RNA deep sequencing o. (uterus)		GSM532878(GSM532878)
G691T. (cervix)		SRR060983(GSM569187)
Human pre-germinal center B cell [09-001]. (cell line)		SRR033722(GSM497067)
KMS12 cell line (KMS12). (B cell)		SRR330914(SRX091752)
tissue: normal skindisease state: normal. (skin)		SRR040010(GSM532895)
G529N. (cervix)		SRR191421(GSM715531)
122genomic small RNA (size selected RNA from . (breast)		SRR039625(GSM531988)
HBV(-) HCV(-) HCC Tissue Sample. (liver)		SRR330888(SRX091726)
tissue: skin psoriatic uninvolveddisease stat. (skin)		SRR342894(SRX096790)
small RNA seq of Right atrial tissue. (heart)		SRR330907(SRX091745)
tissue: normal skindisease state: normal. (skin)		DRR000557(DRX000315)
"THP-1 whole cell RNA, after 3 day treatment . (cell line)		SRR207112(GSM721074)
RRP40 knockdown. (RRP40 cell line)		SRR040016(GSM532901)
G645N. (cervix)		SRR330898(SRX091736)
tissue: skin psoriatic uninvolveddisease stat. (skin)		SRR342901(SRX096797)
small RNA seq of Left atrial tissue. (heart)		SRR330885(SRX091723)
tissue: skin psoriatic uninvolveddisease stat. (skin)		SRR330891(SRX091729)
tissue: skin psoriatic uninvolveddisease stat. (skin)		GSM532874(GSM532874)
G699T. (cervix)		DRR000558(DRX000316)
"THP-1 whole cell RNA, after 3 day treatment . (cell line)		SRR060984(GSM569188)
Human plasma cell [09-001]. (cell line)		SRR033716(GSM497061)
Mentle Cell Lymphoma (MCL114). (B cell)		SRR040031(GSM532916)
G013T. (cervix)		SRR060982(GSM569186)
Human centrocyte [09-001]. (cell line)		SRR033725(GSM497070)
Unmutated CLL (CLLU626). (B cell)		SRR033726(GSM497071)
Mututated CLL (CLLM633). (B cell)		SRR095854(SRX039177)
"miRNA were isolated from FirstChoice Human B. (brain)		SRR040007(GSM532892)
G601T. (cervix)		SRR039636(GSM518473)
THP1_cyto_sRNAs. (cell line)		SRR191549(GSM715659)
105genomic small RNA (size selected RNA from . (breast)		GSM532890(GSM532890)
G576T. (cervix)		SRR040039(GSM532924)
G531T. (cervix)		SRR040025(GSM532910)
G613T. (cervix)		SRR191551(GSM715661)
32genomic small RNA (size selected RNA from t. (breast)		SRR189780(GSM714640)
cell line: HEK293clip variant: PAR-CLIPenzyma. (cell line)		SRR330919(SRX091757)
tissue: normal skindisease state: normal. (skin)		TAX577742(Rovira)
total RNA. (breast)		SRR390723(GSM850202)
total small RNA. (cell line)		DRR001489(DRX001043)
"Hela short nuclear cell fraction, control". (hela)		SRR553576(SRX182782)
source: Testis. (testes)		TAX577579(Rovira)
total RNA. (breast)		SRR040032(GSM532917)
G603N. (cervix)		SRR330902(SRX091740)
tissue: skin psoriatic uninvolveddisease stat. (skin)		SRR191558(GSM715668)
61genomic small RNA (size selected RNA from t. (breast)		SRR038863(GSM458546)
MM603. (cell line)		TAX577738(Rovira)
total RNA. (breast)		SRR033714(GSM497059)
Burkitt Lymphoma (BL134). (B cell)		SRR342895(SRX096791)
small RNA seq of Left atrial tissue. (heart)		SRR444054(SRX128902)
Sample 14cDNABarcode: AF-PP-342: ACG CTC TTC . (skin)		SRR029131(GSM416760)
MCF7. (cell line)		TAX577453(Rovira)
total RNA. (breast)		SRR038862(GSM458545)
MM472. (cell line)		GSM956925Paz8D5(GSM956925)
"cell line: HEK293 cell linepassages: 15-20ip. (cell line)		SRR363674(GSM830251)
cell type: human foreskin fibroblasts (HFF)tr. (fibroblast)		SRR330876(SRX091714)
tissue: skin psoriatic involveddisease state:. (skin)		SRR330916(SRX091754)
tissue: normal skindisease state: normal. (skin)		TAX577745(Rovira)
total RNA. (breast)		SRR037933(GSM510471)
293cand4_rep2. (cell line)		SRR033711(GSM497056)
GCB DLBCL (GCB110). (B cell)		GSM359177(GSM359177)
hela_nucl_a. (hela)		SRR040015(GSM532900)
G623T. (cervix)		SRR038852(GSM458535)
QF1160MB. (cell line)		GSM339995(GSM339995)
hues6NP. (cell line)		SRR191626(GSM715736)
36genomic small RNA (size selected RNA from t. (breast)		SRR038858(GSM458541)
MEL202. (cell line)		SRR040024(GSM532909)
G613N. (cervix)		SRR330860(SRX091698)
tissue: skin psoriatic involveddisease state:. (skin)		SRR330879(SRX091717)
tissue: skin psoriatic involveddisease state:. (skin)		SRR189785SRR189776(GSM714636)
cell line: HEK293clip variant: CLIPenzymatic . (cell line)		SRR330905(SRX091743)
tissue: normal skindisease state: normal. (skin)
.......................................................................GGACCGGGTCGGTGGCGC.................................................................................................................................................................18119.0012.00-4.00-2.00----1.001.00-1.00--------3.00------------------1.00-------------1.00-1.00--1.00------------------1.00-------------1.00--1.00-------------------------
.............................................................................................................................................................................................................................AGTCCCATCTGGGGCGCCA..........1918.000.006.00------1.00-----3.00-3.00--------------------------------------------------1.00--1.00--1.00-------------------------1.00-------1.00-------------
.......................................................................GGACCGGGTCGGTGG....................................................................................................................................................................15112.0012.00---2.00------4.00------------------1.00------------1.00--------------1.00-------1.00--1.00-----------------------------------1.00---------------
..........GAAGCGAAGCCGGAGCTG..............................................................................................................................................................................................................................18110.0010.00----4.00-3.00----1.00------1.00--------------------------------------------------------------------------------------1.00--------------
............................................................................................................................................................................................................................GAGTCCCATCTGGGGTGCC...........199.000.00--2.00----3.00-------------------1.00-----------------------------------1.00---1.00------------1.00---------------------------------------
............................................................CCAAGTGGGACGGACCGGGTCGGTG.....................................................................................................................................................................2516.006.00--------------3.00--3.00------------------------------------------------------------------------------------------------------
.....AAAGGGAAGCGAAGCCGGAG.................................................................................................................................................................................................................................2015.005.00----------------2.00----------1.00-------2.00------------------------------------------------------------------------------------
.......................................................................GGACCGGGTCGGTGGCG..................................................................................................................................................................1715.0012.00--1.00---------------------2.00----1.00----------1.00-------------------------------------------------------------------------------
.......AGGGAAGCGAAGCCGGAG.................................................................................................................................................................................................................................1815.005.00------------------------------------1.00------------------------1.001.00-------------1.00--------------------------------1.00----------
..GACAAAGGGAAGCGAAGCCGG...................................................................................................................................................................................................................................2114.004.00-----4.00------------------------------------------------------------------------------------------------------------------
......AAGGGAAGCGAAGCCGGAG.................................................................................................................................................................................................................................1913.003.00---1.00--------------------------------1.00----------1.00------------------------------------------------------------------------
.............................................................CAAGTGGGACGGACCGGG...........................................................................................................................................................................1813.003.00------------------1.001.00--------------1.00-------------------------------------------------------------------------------------
...........AAGCGAAGCCGGAGCTGCGGG..........................................................................................................................................................................................................................2113.003.00----1.00---2.00---------------------------------------------------------------------------------------------------------------
................................................................GTGGGACGGACCGGGTCGGT......................................................................................................................................................................2013.003.00-2.00---1.00------------------------------------------------------------------------------------------------------------------
.......................................................................GGACCGGGTCGGTGGC...................................................................................................................................................................1613.0012.00---1.00--------------------------------------------1.00---------------------------------------1.00-------------------------------
...........................................................TCCAAGTGGGACGGACCG.............................................................................................................................................................................1813.003.00-------------------------------------1.00-------------------------------------------------------1.00-------------1.00------------
..GACAAAGGGAAGCGAAGCCGGAGC................................................................................................................................................................................................................................2413.003.00------3.00-----------------------------------------------------------------------------------------------------------------
...........................................................TCCAAGTGGGACGGACCGG............................................................................................................................................................................1912.002.00----------------------------1.00----------------------1.00--------------------------------------------------------------------
....................CGGAGCTGCGGGCGCT......................................................................................................................................................................................................................1612.002.00--------------------------------------------1.00---------------1.00-----------------------------------------------------------
........GGGAAGCGAAGCCGGAGCTG..............................................................................................................................................................................................................................2012.002.00------------1.00----------------------------------------------------------------------------1.00------------------------------
............................................................................................................................................................................................................................GAGTCCCATCTGGGGTGC............182.000.00-------------------1.00---1.00------------------------------------------------------------------------------------------------
.....AAAGGGAAGCGAAGCCGG...................................................................................................................................................................................................................................1812.002.00-------------------------1.00-------------------------------------------------------1.00--------------------------------------
...........AAGCGAAGCCGGAGCTGC.............................................................................................................................................................................................................................1822.002.00----------------------------------0.50---0.50------------------------------------------------------------------------0.50--0.50-----
..GACAAAGGGAAGCGAAGCCG....................................................................................................................................................................................................................................2012.002.00---------2.00--------------------------------------------------------------------------------------------------------------
...........................................................................................................................................................CGTGGGGCCAGAGCCAGGAGCCGGT......................................................................2512.002.00------------------------------2.00-----------------------------------------------------------------------------------------
.....AAAGGGAAGCGAAGCCGGAGCTG..............................................................................................................................................................................................................................2312.002.00----1.00--------------------------------------------------------------------------------1.00----------------------------------
.............................................................................................................................................................................................................................AGTCCCATCTGGGGCGCAA..........191.000.001.00-----------------------------------------------------------------------------------------------------------------------
..........GAAGCGAAGCCGGAGCTGCTG...........................................................................................................................................................................................................................2111.001.00---------------------1.00--------------------------------------------------------------------------------------------------
...........................................................................................................................................................................................................GAGCGAGGGTTGGGAGGG.............................1811.001.00------------------1.00-----------------------------------------------------------------------------------------------------
............AGCGAAGCCGGAGCTGCGGG..........................................................................................................................................................................................................................2011.001.00-----------1.00------------------------------------------------------------------------------------------------------------
.......................................................................GGACCGGGTCGGTGGCGCC................................................................................................................................................................1911.0012.00------------------------------------------------------------------------------------------1.00-----------------------------
.............................................................CAAGTGGGACGGACCGGGTCGGTG.....................................................................................................................................................................2411.001.00-------------------------------------------------------------------------1.00----------------------------------------------
.......AGGGAAGCGAAGCCGGAGCTGCGGGCGCC......................................................................................................................................................................................................................291.000.00-----------------------------------------------------------------------------------1.00------------------------------------
............................................................................................................................................................................................................................GAGTCCCATCTGGGGTTCC...........191.000.00--1.00---------------------------------------------------------------------------------------------------------------------
..GACAAAGGGAAGCGAAGCCGT...................................................................................................................................................................................................................................2111.002.00-----1.00------------------------------------------------------------------------------------------------------------------
......................................................................CGGACCGGGTCGGTGGCGC.................................................................................................................................................................191.000.00---------------------------------------------------------------------------1.00--------------------------------------------
..........................................................TTCCAAGTGGGACGGAC...............................................................................................................................................................................1711.001.00---------------------1.00--------------------------------------------------------------------------------------------------
................................................................GTGGGACGGACCGGGTCGG.......................................................................................................................................................................1911.001.00----------------------1.00-------------------------------------------------------------------------------------------------
...............GAAGCCGGAGCTGCGGGCGCT......................................................................................................................................................................................................................2111.001.00----------------------------------------------------1.00-------------------------------------------------------------------
...ACAAAGGGAAGCGAAGCCGGAGCT...............................................................................................................................................................................................................................2411.001.00---------1.00--------------------------------------------------------------------------------------------------------------
.......................................................................GGACCGGGTCGGTGGCGA.................................................................................................................................................................1811.0012.00--1.00---------------------------------------------------------------------------------------------------------------------
.......................................................................GGACCGGGTCGGTGGGTG.................................................................................................................................................................1811.001.00-----------1.00------------------------------------------------------------------------------------------------------------
...ACAAAGGGAAGCGAAGCCGGAGCTGC.............................................................................................................................................................................................................................2611.001.00------------------------------------------------------------------------------------------------------------1.00-----------
..........................................................................CCGGGTCGGTGGGTGGGGC.............................................................................................................................................................191.000.00------------------------------------------------------------------------------------------------------1.00-----------------
.........GGAAGCGAAGCCGGAGCTG..............................................................................................................................................................................................................................1911.001.00---------------------------------------------------------------------------------------------------1.00--------------------
....................CGGAGCTGCGGGCGCTAA....................................................................................................................................................................................................................1811.002.00-----------------------------------------------------------------------------------------------1.00------------------------
.....AAAGGGAAGCGAAGCCGGA..................................................................................................................................................................................................................................1911.001.00--------------------------------------------------1.00---------------------------------------------------------------------
...............GAAGCCGGAGCTGCGGG..........................................................................................................................................................................................................................1711.001.00----------------------------------------------------------------------------------1.00-------------------------------------
............................................................................................................................................................................................................................GAGTCCCATCTGGGGCGACA..........201.000.00----------------1.00-------------------------------------------------------------------------------------------------------
......AAGGGAAGCGAAGCCGGAGC................................................................................................................................................................................................................................2011.001.00------------------------------------------------------------------------------------------------1.00-----------------------
.........................CTGCGGGCGCTTTTTTTTT..............................................................................................................................................................................................................191.000.00-----------------------------------------------------------------------1.00------------------------------------------------
......AAGGGAAGCGAAGCCGGA..................................................................................................................................................................................................................................1811.001.00---------------------------------------------1.00--------------------------------------------------------------------------
.........................................................................ACCGGGTCGGTGGGTGCA...............................................................................................................................................................1811.001.00------------1.00-----------------------------------------------------------------------------------------------------------
................AAGCCGGAGCTGCGGGCGCTTT....................................................................................................................................................................................................................2211.001.00-------------1.00----------------------------------------------------------------------------------------------------------
..................................................GTGAGTGTTTCCAAGTGGGACGGACCGG............................................................................................................................................................................2811.001.00--------------------------------------------------------1.00---------------------------------------------------------------
..........GAAGCGAAGCCGGAGCTGCGGGCGCTTTT...................................................................................................................................................................................................................2911.001.00------------1.00-----------------------------------------------------------------------------------------------------------
.......................................................................GGACCGGGTCGGTGGATGG................................................................................................................................................................1911.0012.00----------------------------------------------1.00-------------------------------------------------------------------------
......................................................................................GTGCAAGTCGTGGTGTCCCC................................................................................................................................................2011.001.00----------------------------------------------------------------------1.00-------------------------------------------------
.....................................................................ACGGACCGGGTCGGTGGG...................................................................................................................................................................1811.001.00-------------------------------------------------------------------------------------------------------1.00----------------
..................GCCGGAGCTGCGGGCGGA......................................................................................................................................................................................................................181.000.00-1.00----------------------------------------------------------------------------------------------------------------------
............................................................................................................................................................................................................................GAGTCCCATCTGGGGAGCC...........191.000.00-------1.00----------------------------------------------------------------------------------------------------------------
.......AGGGAAGCGAAGCCGGAGCTGCGGG..........................................................................................................................................................................................................................2511.001.00------------1.00-----------------------------------------------------------------------------------------------------------
......AAGGGAAGCGAAGCCGGAGCTGCGGGCG........................................................................................................................................................................................................................2811.001.00---------------------------------1.00--------------------------------------------------------------------------------------
...................CCGGAGCTGCGGGCGC.......................................................................................................................................................................................................................1611.001.00-------------------------------------------1.00----------------------------------------------------------------------------
..........................................................................................................................AGTTCCCGGGGGTTGCTGGGG...........................................................................................................2111.001.00-----------------------1.00------------------------------------------------------------------------------------------------
...............................................................................TCGGTGGGTGCAAGTCGTGGTG.....................................................................................................................................................2211.001.00--------------------------------------------------------------------------1.00---------------------------------------------
...............GAAGCCGGAGCTGCGGGCGC.......................................................................................................................................................................................................................2011.001.00------------------------------------------------------------------------------1.00-----------------------------------------
...........AAGCGAAGCCGGAGCTGCGGGCG........................................................................................................................................................................................................................2311.001.00----------------------------1.00-------------------------------------------------------------------------------------------
...ACAAAGGGAAGCGAAGCCGG...................................................................................................................................................................................................................................2011.001.00-------------------------------------------------------------------------------1.00----------------------------------------
..........GAAGCGAAGCCGGAGCT...............................................................................................................................................................................................................................1711.001.00-------------------------------------------------1.00----------------------------------------------------------------------
............................................................CCAAGTGGGACGGACCGGGTCGG.......................................................................................................................................................................2311.001.00--------------------------------1.00---------------------------------------------------------------------------------------
......AAGGGAAGCGAAGCCGGAGCTGCGGGCGC.......................................................................................................................................................................................................................2911.001.00--------------------------1.00---------------------------------------------------------------------------------------------
............AGCGAAGCCGGAGCTGCG............................................................................................................................................................................................................................1811.001.00--------------------------------------1.00---------------------------------------------------------------------------------
..................GCCGGAGCTGCGGGCGCTTTTT..................................................................................................................................................................................................................2211.001.00--------------------------------------------------------------------------------------------------------------1.00---------
.............................................................................................................................................................TGGGGCCAGAGCCAGGAGCCGGTTG....................................................................2511.001.00--------------------------1.00---------------------------------------------------------------------------------------------
...............................................................................................................................................................................................................GAGGGTTGGGAGGGAGTC.........................1811.001.00-----------------------------------------------------------1.00------------------------------------------------------------
........................................................................................................................................................................................................GCAGAGCGAGGGTTGTAG................................181.000.001.00-----------------------------------------------------------------------------------------------------------------------
..............CGAAGCCGGAGCTGCGGGCG........................................................................................................................................................................................................................2011.001.00-----------------------------------------------------------------------------------------------------1.00------------------
.....AAAGGGAAGCGAAGCCG....................................................................................................................................................................................................................................1711.001.00----------------------------------------------------------------1.00-------------------------------------------------------
................AAGCCGGAGCTGCGGGC.........................................................................................................................................................................................................................1711.001.00--------------------------------------------------------------------------------------1.00---------------------------------
.........................................................TTTCCAAGTGGGACGGAC...............................................................................................................................................................................1811.001.00---------------------------------------------------------------------------------------1.00--------------------------------
..........GAAGCGAAGCCGGAGCTGC.............................................................................................................................................................................................................................1911.001.00--------------------------------------------------------------------------------------------1.00---------------------------
.....AAAGGGAAGCGAAGCCGGAGCTGCG............................................................................................................................................................................................................................2511.001.00---1.00--------------------------------------------------------------------------------------------------------------------
.............GCGAAGCCGGAGCTGCGGGCGCT......................................................................................................................................................................................................................2311.001.00----------------------------------------------------------------------------------------------------1.00-------------------
.......AGGGAAGCGAAGCCGGAGCTG..............................................................................................................................................................................................................................2111.001.00------------------------------------------------------1.00-----------------------------------------------------------------
............................................................CCAAGTGGGACGGACCGGG...........................................................................................................................................................................1911.001.00-------------------1.00----------------------------------------------------------------------------------------------------
...........................................................TCCAAGTGGGACGGACC..............................................................................................................................................................................1711.001.00-------------------------------1.00----------------------------------------------------------------------------------------
...ACAAAGGGAAGCGAAGCCGGAG.................................................................................................................................................................................................................................2211.001.00-------------------------------------------------------------------------------------------------1.00----------------------
...............GAAGCCGGAGCTGCGGGCT........................................................................................................................................................................................................................191.000.00--1.00---------------------------------------------------------------------------------------------------------------------
..............................................................................GTCGGTGGGTGCAAGTCGTGGTGTCCCC................................................................................................................................................2811.001.00------------------------------------------------------------------------------------1.00-----------------------------------
.GGACAAAGGGAAGCGAAGCCGGAGCTGC.............................................................................................................................................................................................................................2811.001.00-------------------------------1.00----------------------------------------------------------------------------------------
.........GGAAGCGAAGCCGGAGCTGC.............................................................................................................................................................................................................................2011.001.00----------------------1.00-------------------------------------------------------------------------------------------------
..................GCCGGAGCTGCGGGCGCT......................................................................................................................................................................................................................1811.001.00--------------------------------1.00---------------------------------------------------------------------------------------
......AAGGGAAGCGAAGCCGGAGCTG..............................................................................................................................................................................................................................2211.001.00---------------------------------1.00--------------------------------------------------------------------------------------
..................GCCGGAGCTGCGGGCGCTTTTCTG................................................................................................................................................................................................................241.000.00--------1.00---------------------------------------------------------------------------------------------------------------
...........AAGCGAAGCCGGAGCT...............................................................................................................................................................................................................................1620.500.50---------------------------------------0.50--------------------------------------------------------------------------------
...........AAGCGAAGCCGGAGCTG..............................................................................................................................................................................................................................1720.500.50----------------------------------------------------------------------------------------------------------------0.50-------
......................................................................................................................CCCGAGTTCCCGGGG.....................................................................................................................1530.330.33-------------------------------------------------------------------------------------------------------------------0.33----
.................................GCTTTTTCTGCCCGC..........................................................................................................................................................................................................1540.250.25--------------------------------------------------------------------------------------------------------------------0.25---
......AAGGGAAGCGAAGCC.....................................................................................................................................................................................................................................1550.200.20----------------------------------------0.20-------------------------------------------------------------------------------
..................GCCGGAGCTGCGGGC.........................................................................................................................................................................................................................1580.120.12-----------------------------------------------------------------------------------------------------------------------0.12

Antisense strand
GGGACAAAGGGAAGCGAAGCCGGAGCTGCGGGCGCTTTTTCTGCCCGCGGGTGAGTGTTTCCAAGTGGGACGGACCGGGTCGGTGGGTGCAAGTCGTGGTGTCCCCGCTTGGCTAGACCCCGAGTTCCCGGGGGTTGCTGGGGTTCAGCCTTGGCCGTGGGGCCAGAGCCAGGAGCCGGTTGAGGCCTCCTTGAGGCCTAGCAGAGCGAGGGTTGGGAGGGAGTCCCATCTGGGGCCCCCTCCTTGGAGG
........................................................................((((((.((.(((((..((........))..)))))..((((..(((((.(((.((....))..))))))))..)))).(((((....))))).......)).)))))).....................................................................
..................................................................67...................................................................................................................184................................................................
SizePerfect hitTotal NormPerfect NormSRR037937(GSM510475)
293cand2. (cell line)		SRR207110(GSM721072)
Nuclear RNA. (cell line)		GSM532876(GSM532876)
G547T. (cervix)		SRR553572(SRX182778)
source: Frontal Cortex. (Frontal Cortex)		SRR033728(GSM497073)
MALT (MALT413). (B cell)		SRR207116(GSM721078)
Nuclear RNA. (cell line)		SRR033729(GSM497074)
splenic MZL (Splenic414). (B cell)		SRR037944(GSM510482)
293DcrTN_cand5. (cell line)		SRR033710(GSM497055)
GCB DLBCL (GCB385). (B cell)		RoviraIPAgo2(Rovira)
total RNA. (ago2 breast)		SRR553573(SRX182779)
source: Cerebellum. (Cerebellum)		SRR033727(GSM497072)
HIV-positive DL (HIV412). (B cell)		SRR039193(GSM494812)
HL60 cell line is derived from acute promyelo. (cell line)		TAX577743(Rovira)
total RNA. (breast)		SRR033719(GSM497064)
6hr Activated B cell line (ABC158). (B cell)		SRR037936(GSM510474)
293cand1. (cell line)		SRR444049(SRX128897)
Sample 9cDNABarcode: AF-PP-334: ACG CTC TTC C. (skin)		SRR033720(GSM497065)
EBV activated B cell line (EBV159). (B cell)		SRR039635(GSM518472)
THP1_nuc_sRNAs. (cell line)		SRR207115(GSM721077)
XRN1&2 knockdown. (XRN1/XRN2 cell line)		SRR444044(SRX128892)
Sample 5cDNABarcode: AF-PP-340: ACG CTC TTC C. (skin)		SRR207111(GSM721073)
Whole cell RNA. (cell line)		DRR000556(DRX000314)
"THP-1 whole cell RNA, after 3 day treatment . (cell line)		SRR330903(SRX091741)
tissue: skin psoriatic uninvolveddisease stat. (skin)		SRR191630(GSM715740)
70genomic small RNA (size selected RNA from t. (breast)		TAX577739(Rovira)
total RNA. (breast)		SRR189779(GSM714639)
cell line: HEK293clip variant: PAR-CLIPenzyma. (cell line)		SRR444052(SRX128900)
Sample 12cDNABarcode: AF-PP-340: ACG CTC TTC . (skin)		SRR038859(GSM458542)
MM386. (cell line)		SRR330874(SRX091712)
tissue: skin psoriatic involveddisease state:. (skin)		SRR033713(GSM497058)
Burkitt Lymphoma (BL115). (B cell)		SRR330877(SRX091715)
tissue: skin psoriatic involveddisease state:. (skin)		SRR060168(GSM565978)
5-8F_nucleus. (cell line)		SRR039622(GSM531985)
HCV(+) Adjacent Tissue Sample. (liver)		SRR033730(GSM497075)
Lymphoblastic (ALL411). (B cell)		SRR040020(GSM532905)
G699N_2. (cervix)		SRR039619(GSM531982)
HBV(+) HCC Tissue Sample 1. (liver)		SRR038854(GSM458537)
MM653. (cell line)		SRR038860(GSM458543)
MM426. (cell line)		SRR342897(SRX096793)
small RNA seq of Left atrial tissue. (heart)		SRR342900(SRX096796)
small RNA seq of Right atrial tissue. (heart)		SRR342899(SRX096795)
small RNA seq of Left atrial tissue. (heart)		SRR330867(SRX091705)
tissue: skin psoriatic involveddisease state:. (skin)		DRR001488(DRX001042)
"Hela short nuclear cell fraction, LNA(+)". (hela)		SRR330921(SRX091759)
tissue: normal skindisease state: normal. (skin)		SRR330865(SRX091703)
tissue: skin psoriatic involveddisease state:. (skin)		SRR039616(GSM531979)
HBV(+) Distal Tissue Sample 1. (liver)		SRR040018(GSM532903)
G701N. (cervix)		SRR330912(SRX091750)
tissue: normal skindisease state: normal. (skin)		SRR094129(GSM651905)
small RNA(18-35nt)small RNA deep sequencing o. (uterus)		GSM532878(GSM532878)
G691T. (cervix)		SRR060983(GSM569187)
Human pre-germinal center B cell [09-001]. (cell line)		SRR033722(GSM497067)
KMS12 cell line (KMS12). (B cell)		SRR330914(SRX091752)
tissue: normal skindisease state: normal. (skin)		SRR040010(GSM532895)
G529N. (cervix)		SRR191421(GSM715531)
122genomic small RNA (size selected RNA from . (breast)		SRR039625(GSM531988)
HBV(-) HCV(-) HCC Tissue Sample. (liver)		SRR330888(SRX091726)
tissue: skin psoriatic uninvolveddisease stat. (skin)		SRR342894(SRX096790)
small RNA seq of Right atrial tissue. (heart)		SRR330907(SRX091745)
tissue: normal skindisease state: normal. (skin)		DRR000557(DRX000315)
"THP-1 whole cell RNA, after 3 day treatment . (cell line)		SRR207112(GSM721074)
RRP40 knockdown. (RRP40 cell line)		SRR040016(GSM532901)
G645N. (cervix)		SRR330898(SRX091736)
tissue: skin psoriatic uninvolveddisease stat. (skin)		SRR342901(SRX096797)
small RNA seq of Left atrial tissue. (heart)		SRR330885(SRX091723)
tissue: skin psoriatic uninvolveddisease stat. (skin)		SRR330891(SRX091729)
tissue: skin psoriatic uninvolveddisease stat. (skin)		GSM532874(GSM532874)
G699T. (cervix)		DRR000558(DRX000316)
"THP-1 whole cell RNA, after 3 day treatment . (cell line)		SRR060984(GSM569188)
Human plasma cell [09-001]. (cell line)		SRR033716(GSM497061)
Mentle Cell Lymphoma (MCL114). (B cell)		SRR040031(GSM532916)
G013T. (cervix)		SRR060982(GSM569186)
Human centrocyte [09-001]. (cell line)		SRR033725(GSM497070)
Unmutated CLL (CLLU626). (B cell)		SRR033726(GSM497071)
Mututated CLL (CLLM633). (B cell)		SRR095854(SRX039177)
"miRNA were isolated from FirstChoice Human B. (brain)		SRR040007(GSM532892)
G601T. (cervix)		SRR039636(GSM518473)
THP1_cyto_sRNAs. (cell line)		SRR191549(GSM715659)
105genomic small RNA (size selected RNA from . (breast)		GSM532890(GSM532890)
G576T. (cervix)		SRR040039(GSM532924)
G531T. (cervix)		SRR040025(GSM532910)
G613T. (cervix)		SRR191551(GSM715661)
32genomic small RNA (size selected RNA from t. (breast)		SRR189780(GSM714640)
cell line: HEK293clip variant: PAR-CLIPenzyma. (cell line)		SRR330919(SRX091757)
tissue: normal skindisease state: normal. (skin)		TAX577742(Rovira)
total RNA. (breast)		SRR390723(GSM850202)
total small RNA. (cell line)		DRR001489(DRX001043)
"Hela short nuclear cell fraction, control". (hela)		SRR553576(SRX182782)
source: Testis. (testes)		TAX577579(Rovira)
total RNA. (breast)		SRR040032(GSM532917)
G603N. (cervix)		SRR330902(SRX091740)
tissue: skin psoriatic uninvolveddisease stat. (skin)		SRR191558(GSM715668)
61genomic small RNA (size selected RNA from t. (breast)		SRR038863(GSM458546)
MM603. (cell line)		TAX577738(Rovira)
total RNA. (breast)		SRR033714(GSM497059)
Burkitt Lymphoma (BL134). (B cell)		SRR342895(SRX096791)
small RNA seq of Left atrial tissue. (heart)		SRR444054(SRX128902)
Sample 14cDNABarcode: AF-PP-342: ACG CTC TTC . (skin)		SRR029131(GSM416760)
MCF7. (cell line)		TAX577453(Rovira)
total RNA. (breast)		SRR038862(GSM458545)
MM472. (cell line)		GSM956925Paz8D5(GSM956925)
"cell line: HEK293 cell linepassages: 15-20ip. (cell line)		SRR363674(GSM830251)
cell type: human foreskin fibroblasts (HFF)tr. (fibroblast)		SRR330876(SRX091714)
tissue: skin psoriatic involveddisease state:. (skin)		SRR330916(SRX091754)
tissue: normal skindisease state: normal. (skin)		TAX577745(Rovira)
total RNA. (breast)		SRR037933(GSM510471)
293cand4_rep2. (cell line)		SRR033711(GSM497056)
GCB DLBCL (GCB110). (B cell)		GSM359177(GSM359177)
hela_nucl_a. (hela)		SRR040015(GSM532900)
G623T. (cervix)		SRR038852(GSM458535)
QF1160MB. (cell line)		GSM339995(GSM339995)
hues6NP. (cell line)		SRR191626(GSM715736)
36genomic small RNA (size selected RNA from t. (breast)		SRR038858(GSM458541)
MEL202. (cell line)		SRR040024(GSM532909)
G613N. (cervix)		SRR330860(SRX091698)
tissue: skin psoriatic involveddisease state:. (skin)		SRR330879(SRX091717)
tissue: skin psoriatic involveddisease state:. (skin)		SRR189785SRR189776(GSM714636)
cell line: HEK293clip variant: CLIPenzymatic . (cell line)		SRR330905(SRX091743)
tissue: normal skindisease state: normal. (skin)
...........................................................................CGGGTCGGTGGGTGCACCT............................................................................................................................................................ 191.000.00--1.00---------------------------------------------------------------------------------------------------------------------
...........................................................................................................................................................................GGAGCCGGTTGAGGCGGT............................................................. 181.000.00-------------------------1.00----------------------------------------------------------------------------------------------
......................................................................................................CCCCGCTTGGCTAGACCCT................................................................................................................................. 191.000.00-----------------------------------------1.00------------------------------------------------------------------------------
....................CGGAGCTGCGGGCGCCTGG................................................................................................................................................................................................................... 190.250.00---------------------------------------------------------------------------------------------------------------------0.25--
....................GCGCCCGCAGCTCCG....................................................................................................................................................................................................................... 1540.250.25----------------------------------------------------------------------------------------------------------------------0.25-