ID: uc002hua.3_intron_3_0_chr17_38285881_f.5p
GENE: (4)
chr17:38285831-38286080+


(1)
AGO1.ip 		(1)
AGO1.ip OTHER.mut 		(1)
AGO2.ip 		(9)
B-CELL 		(10)
BRAIN 		(11)
BREAST 		(28)
CELL-LINE 		(3)
CERVIX 		(1)
FIBROBLAST 		(7)
HEART 		(5)
HELA 		(1)
KIDNEY 		(8)
LIVER 		(4)
OTHER 		(1)
RRP40.ip 		(25)
SKIN 		(1)
TESTES 		(2)
XRN.ip

Sense strand
ACCGTTACCATTACGGGAATCCTCTCCAAAGAAGGAGGAGACTGTAGCAAGTAAGGCATAGAGAACACTTGCTCTTATACCCTAGTGGTGGCGGTCAAGCTAACAAGTGTGAAAATGCCTTTGGCATTTTTAAAAAAGTGCAATCAATAAAGCAGAGTTCTGTCAAGAATGAGTAAGTTAACAGCCAGAGACAGACACTGTGCAGGCATTGCAAATAGATGGAATTACAGCAAAATGTGCTCAATGTATT
....................................................(((((((.....(((((((.........((....)).(((......)))..)))))))....)))))))..(((((((....))))))).............................................................................................................
..................................................51.....................................................................................................154..............................................................................................
SizePerfect hitTotal NormPerfect NormSRR207115(GSM721077)
XRN1&2 knockdown. (XRN1/XRN2 cell line)		SRR189784SRR039622(GSM531985)
HCV(+) Adjacent Tissue Sample. (liver)		SRR553576(SRX182782)
source: Testis. (testes)		SRR553572(SRX182778)
source: Frontal Cortex. (Frontal Cortex)		SRR343335SRR039620(GSM531983)
HBV(+) Adjacent Tissue Sample 2. (liver)		SRR033712(GSM497057)
Burkitt Lymphoma (BL510). (B cell)		SRR039625(GSM531988)
HBV(-) HCV(-) HCC Tissue Sample. (liver)		SRR189779(GSM714639)
cell line: HEK293clip variant: PAR-CLIPenzyma. (cell line)		DRR001486(DRX001040)
"Hela long cytoplasmic cell fraction, LNA(+)". (hela)		SRR326282(GSM769512)
"Dicer mRNA was knocked down using siDicer, t. (cell line)		RoviraIPAgo2(Rovira)
total RNA. (ago2 breast)		SRR039623(GSM531986)
HCV(+) HCC Tissue Sample. (liver)		SRR342899(SRX096795)
small RNA seq of Left atrial tissue. (heart)		SRR189786SRR343334SRR342901(SRX096797)
small RNA seq of Left atrial tissue. (heart)		GSM1105748AGO1(GSM1105748)
small RNA sequencing data. (ago1 hela)		GSM450601(GSM450601)
miRNA sequencing raw reads from post-mortem s. (brain)		GSM450602(GSM450602)
miRNA sequencing raw reads from post-mortem s. (brain)		GSM450599(GSM450599)
miRNA sequencing raw reads from post-mortem s. (brain)		SRR207116(GSM721078)
Nuclear RNA. (cell line)		GSM450605(GSM450605)
miRNA sequencing raw reads from post-mortem s. (brain)		SRR342897(SRX096793)
small RNA seq of Left atrial tissue. (heart)		SRR330913(SRX091751)
tissue: normal skindisease state: normal. (skin)		SRR189782SRR330879(SRX091717)
tissue: skin psoriatic involveddisease state:. (skin)		SRR342894(SRX096790)
small RNA seq of Right atrial tissue. (heart)		SRR553573(SRX182779)
source: Cerebellum. (Cerebellum)		SRR189785SRR033727(GSM497072)
HIV-positive DL (HIV412). (B cell)		GSM450610(GSM450610)
miRNA sequencing raw reads from post-mortem s. (brain)		SRR033715(GSM497060)
Mantle Cell Lymphoma (Mino122). (B cell)		SRR342900(SRX096796)
small RNA seq of Right atrial tissue. (heart)		SRR342896(SRX096792)
small RNA seq of Right atrial tissue. (heart)		SRR326281(GSM769511)
"Dicer mRNA was knocked down using siDicer, c. (cell line)		SRR330865(SRX091703)
tissue: skin psoriatic involveddisease state:. (skin)		SRR039191(GSM494810)
PBMCs were isolated by ficoll gradient from t. (blood)		SRR326279(GSM769509)
cytoplasmic fraction was isolated using PARIS. (cell line)		SRR330885(SRX091723)
tissue: skin psoriatic uninvolveddisease stat. (skin)		GSM450609(GSM450609)
miRNA sequencing raw reads from post-mortem s. (brain)		SRR330864(SRX091702)
tissue: skin psoriatic involveddisease state:. (skin)		SRR060984(GSM569188)
Human plasma cell [09-001]. (cell line)		SRR207118(GSM721080)
RRP40 knockdown. (RRP40 cell line)		SRR039612(GSM531975)
Human Normal Liver Tissue Sample 2. (liver)		TAX577739(Rovira)
total RNA. (breast)		SRR207114(GSM721076)
"IP against AGO 1 & 2, RRP40 knockdown". (ago1/2 RRP40 cell line)		SRR189780(GSM714640)
cell line: HEK293clip variant: PAR-CLIPenzyma. (cell line)		SRR107296(GSM677703)
18-30nt fraction of small RNA. (cell line)		SRR326280(GSM769510)
total cell content of unperturbed cells was s. (cell line)		SRR342898(SRX096794)
small RNA seq of Right atrial tissue. (heart)		SRR033723(GSM497068)
L1236 cell line (L1236). (B cell)		SRR330878(SRX091716)
tissue: skin psoriatic involveddisease state:. (skin)		GSM450598(GSM450598)
miRNA sequencing raw reads from post-mortem s. (brain)		SRR207119(GSM721081)
XRN1&2 knockdown. (XRN1/XRN2 cell line)		TAX577745(Rovira)
total RNA. (breast)		SRR191605(GSM715715)
76genomic small RNA (size selected RNA from t. (breast)		DRR001488(DRX001042)
"Hela short nuclear cell fraction, LNA(+)". (hela)		SRR330872(SRX091710)
tissue: skin psoriatic involveddisease state:. (skin)		SRR039616(GSM531979)
HBV(+) Distal Tissue Sample 1. (liver)		GSM450606(GSM450606)
miRNA sequencing raw reads from post-mortem s. (brain)		SRR029054(GSM402329)
MCF7_smallRNAseq. (cell line)		TAX577580(Rovira)
total RNA. (breast)		SRR060983(GSM569187)
Human pre-germinal center B cell [09-001]. (cell line)		SRR330883(SRX091721)
tissue: skin psoriatic uninvolveddisease stat. (skin)		SRR330908(SRX091746)
tissue: normal skindisease state: normal. (skin)		DRR000555(DRX000313)
"THP-1 whole cell RNA, no treatment". (cell line)		GSM532876(GSM532876)
G547T. (cervix)		SRR039614(GSM531977)
HBV-infected Liver Tissue. (liver)		SRR189787SRR039190(GSM494809)
PBMCs were isolated by ficoll gradient from t. (blood)		DRR000557(DRX000315)
"THP-1 whole cell RNA, after 3 day treatment . (cell line)		SRR189783SRR330863(SRX091701)
tissue: skin psoriatic involveddisease state:. (skin)		SRR033717(GSM497062)
Mentle Cell Lymphoma (MCL112). (B cell)		SRR330922(SRX091760)
tissue: normal skindisease state: normal. (skin)		SRR039618(GSM531981)
HBV(+) Side Tissue Sample 1. (liver)		SRR330910(SRX091748)
tissue: normal skindisease state: normal. (skin)		SRR330903(SRX091741)
tissue: skin psoriatic uninvolveddisease stat. (skin)		SRR037937(GSM510475)
293cand2. (cell line)		SRR015364(GSM380329)
Plasma B cells (PC44). (B cell)		SRR039192(GSM494811)
K562 cell line is derived from a CML patient . (cell line)		SRR033721(GSM497066)
Ly3 cell line (Ly3). (B cell)		SRR060982(GSM569186)
Human centrocyte [09-001]. (cell line)		SRR095854(SRX039177)
"miRNA were isolated from FirstChoice Human B. (brain)		GSM450603(GSM450603)
miRNA sequencing raw reads from post-mortem s. (brain)		TAX577741(Rovira)
total RNA. (breast)		SRR015447(SRR015447)
nuclear small RNAs. (breast)		SRR330899(SRX091737)
tissue: skin psoriatic uninvolveddisease stat. (skin)		SRR330919(SRX091757)
tissue: normal skindisease state: normal. (skin)		SRR038859(GSM458542)
MM386. (cell line)		SRR330901(SRX091739)
tissue: skin psoriatic uninvolveddisease stat. (skin)		SRR039635(GSM518472)
THP1_nuc_sRNAs. (cell line)		SRR191411(GSM715521)
21genomic small RNA (size selected RNA from t. (breast)		DRR000559(DRX000317)
"THP-1 whole cell RNA, no treatment". (cell line)		DRR001489(DRX001043)
"Hela short nuclear cell fraction, control". (hela)		SRR330868(SRX091706)
tissue: skin psoriatic involveddisease state:. (skin)		DRR001483(DRX001037)
"Hela long cytoplasmic cell fraction, control. (hela)		TAX577579(Rovira)
total RNA. (breast)		SRR330870(SRX091708)
tissue: skin psoriatic involveddisease state:. (skin)		SRR060168(GSM565978)
5-8F_nucleus. (cell line)		SRR330915(SRX091753)
tissue: normal skindisease state: normal. (skin)		SRR015360(GSM380325)
Plasma B cells (PC137). (B cell)		SRR363673(GSM830250)
cell type: human foreskin fibroblasts (HFF)tr. (fibroblast)		SRR040024(GSM532909)
G613N. (cervix)		SRR038862(GSM458545)
MM472. (cell line)		GSM956925Paz8D5(GSM956925)
"cell line: HEK293 cell linepassages: 15-20ip. (cell line)		SRR330876(SRX091714)
tissue: skin psoriatic involveddisease state:. (skin)		SRR330916(SRX091754)
tissue: normal skindisease state: normal. (skin)		SRR033729(GSM497074)
splenic MZL (Splenic414). (B cell)		SRR060981(GSM569185)
Human centroblast [09-001]. (cell line)		TAX577743(Rovira)
total RNA. (breast)		SRR444049(SRX128897)
Sample 9cDNABarcode: AF-PP-334: ACG CTC TTC C. (skin)		SRR444060(SRX128908)
Sample 18cDNABarcode: AF-PP-340: ACG CTC TTC . (skin)		SRR040010(GSM532895)
G529N. (cervix)		SRR060169(GSM565979)
5-8F_cytoplasm. (cell line)		TAX577453(Rovira)
total RNA. (breast)		SRR330909(SRX091747)
tissue: normal skindisease state: normal. (skin)		SRR330867(SRX091705)
tissue: skin psoriatic involveddisease state:. (skin)		SRR553575(SRX182781)
source: Kidney. (Kidney)
............................................................................................................................CATTTTTAAAAAAGTGCAATCAAAAG....................................................................................................2615.000.00-9.00---5.00----------1.00--------------------------------------------------------------------------------------------------------
.........................CCAAAGAAGGAGGAGACTGTAGCAA........................................................................................................................................................................................................25111.0011.007.00----------1.00---------------1.00---------------------------------------------------1.00----------------------------1.00------------
.............................AGAAGGAGGAGACTGTAGCAA........................................................................................................................................................................................................2118.008.00---1.00---5.00----------------------------------------------------1.00-----------1.00------------------------------------------------
...................................AGGAGACTGTAGCAAGTAAGGCA................................................................................................................................................................................................2318.008.00------1.00-2.00----1.001.00-----1.00----------------------------1.00---------1.00-------------------------------------------------------------
.........................CCAAAGAAGGAGGAGACTGTAGCAAG.......................................................................................................................................................................................................2617.007.003.00-----------1.00-----------------------2.00--------------1.00---------------------------------------------------------------------
.........................CCAAAGAAGGAGGAGACTGTAGCAAGT......................................................................................................................................................................................................2716.006.001.00----------1.00---------------------2.00--1.00-------------1.00----------------------------------------------------------------------
................................AGGAGGAGACTGTAGCAAGTAAGGCA................................................................................................................................................................................................2616.006.00--1.001.00------------------2.00--------------1.00-----------------------------------------------------1.00-----------------------------
..................................GAGGAGACTGTAGCAA........................................................................................................................................................................................................1615.005.00----3.00--------------------------------------------------------------1.00----------------------------1.00------------------------
........................TCCAAAGAAGGAGGAGACTGTAGCAAGGT.....................................................................................................................................................................................................295.000.00---5.00---------------------------------------------------------------------------------------------------------------------
...................................AGGAGACTGTAGCAAGTAAGGC.................................................................................................................................................................................................2215.005.00------2.00----------1.00-------------2.00-----------------------------------------------------------------------------------------
...............................AAGGAGGAGACTGTAGCAAGTAAGG..................................................................................................................................................................................................2515.005.00--------------1.00---------2.00---------------2.00--------------------------------------------------------------------------------
...........................AAAGAAGGAGGAGACTGTAGCA.........................................................................................................................................................................................................2214.004.004.00------------------------------------------------------------------------------------------------------------------------
..................................GAGGAGACTGTAGCAAGTAAGGCA................................................................................................................................................................................................2414.004.00-------------------1.002.001.00---------------------------------------------------------------------------------------------------
.............................................................................................................................ATTTTTAAAAAAGTGCAATCAAAAG....................................................................................................254.000.00-4.00-----------------------------------------------------------------------------------------------------------------------
.........................CCAAAGAAGGAGGAGACTGTAGCA.........................................................................................................................................................................................................2414.004.002.00---1.00---------------------------------------------1.00----------------------------------------------------------------------
...........................AAAGAAGGAGGAGACTGTAG...........................................................................................................................................................................................................2014.004.00-----------------1.00-----1.00-----------1.00------------------------------------------------------------------1.00------------------
................................AGGAGGAGACTGTAGCAAGTAAGGCATAGAGAACACTTGCTCTTATACCCTAGTGGTGGCGGTCAAGCTAACAAGTGTGAAAATGCCTTTGGCATTTT........................................................................................................................9814.004.00----------4.00--------------------------------------------------------------------------------------------------------------
..................................GAGGAGACTGTAGCAAGTAAGGC.................................................................................................................................................................................................2313.003.00--1.00-1.00---------------------------------------1.00----------------------------------------------------------------------------
..........................CAAAGAAGGAGGAGACTGTAG...........................................................................................................................................................................................................2113.003.00------------------1.00----------------------------2.00-------------------------------------------------------------------------
..........................CAAAGAAGGAGGAGACTGTAGCAAGT......................................................................................................................................................................................................2613.003.001.00--1.00-----------------------------------1.00---------------------------------------------------------------------------------
.............................AGAAGGAGGAGACTGTAGCAAGT......................................................................................................................................................................................................2313.003.00--1.00---1.00----------------------------------------------------------------------1.00-------------------------------------------
..........................................................................................................................................................................................AGAGACAGACACTGTGCAGGCA..........................................2213.003.00--1.00-----2.00----------------------------------------------------------------------------------------------------------------
.............................AGAAGGAGGAGACTGTAGC..........................................................................................................................................................................................................1913.003.00-----------------1.00----------------1.00-----------------1.00--------------------------------------------------------------------
......................................AGACTGTAGCAAGTAAGGCA................................................................................................................................................................................................2013.003.00--1.00--------------------------------------1.00-------------------------------------------------------1.00-----------------------
...............................AAGGAGGAGACTGTAGCAAGTAAG...................................................................................................................................................................................................2413.003.00-------------------------1.00-----------------------1.00-----------------------------------------------------1.00-----------------
..............................................................................................................................................ATCAATAAAGCAGAGTTCTGT.......................................................................................2113.003.00-------3.00-----------------------------------------------------------------------------------------------------------------
.........................CCAAAGAAGGAGGAGACTGTAGCAAT.......................................................................................................................................................................................................2613.0011.003.00------------------------------------------------------------------------------------------------------------------------
.................................GGAGGAGACTGTAGCAAGTAAGGCATA..............................................................................................................................................................................................2713.003.00-------------1.00----------1.00------------------------------------------------------------------------------------1.00-----------
......................................AGACTGTAGCAAGTAAGGCATAG.............................................................................................................................................................................................2313.003.00--1.00------------------1.00-------------------------------1.00-------------------------------------------------------------------
................GAATCCTCTCCAAAGAAGGAGGAGACTGTAGCAAGTAAGGCATAGAGAACACTTGCTCTTATACCCTAGTGGTGGCGGTCAAGCTAA...................................................................................................................................................8713.003.00----------3.00--------------------------------------------------------------------------------------------------------------
...................................................................................................................................AAAAAAGTGCAATCAAAG.....................................................................................................183.000.00-----3.00-------------------------------------------------------------------------------------------------------------------
.............................AGAAGGAGGAGACTGTAGCAAGTAAGGC.................................................................................................................................................................................................2813.003.00--2.00---------------------------------------1.00------------------------------------------------------------------------------
...............................AAGGAGGAGACTGTAGCAA........................................................................................................................................................................................................1912.002.00---------------------------------------------------------------------------------------------1.00----------------1.00----------
.............................AGAAGGAGGAGACTGTAGCAAGTAA....................................................................................................................................................................................................2512.002.00------2.00------------------------------------------------------------------------------------------------------------------
..................................GAGGAGACTGTAGCAAGTAAGGCATAG.............................................................................................................................................................................................2712.002.00----2.00--------------------------------------------------------------------------------------------------------------------
......................................AGACTGTAGCAAGTAAGGCAT...............................................................................................................................................................................................2112.002.00--------------------------------1.00---------------------1.00------------------------------------------------------------------
.....................................................AGGCATAGAGAACACTTG...................................................................................................................................................................................1812.002.00----------------------------1.00------1.00-------------------------------------------------------------------------------------
.............................AGAAGGAGGAGACTGTAGCAAGTA.....................................................................................................................................................................................................2412.002.00--------------------1.00--------1.00-------------------------------------------------------------------------------------------
.........................CCAAAGAAGGAGGAGACTGTAG...........................................................................................................................................................................................................2212.002.001.00-----------------1.00------------------------------------------------------------------------------------------------------
.............................AGAAGGAGGAGACTGTA............................................................................................................................................................................................................1712.002.00-------------------2.00-----------------------------------------------------------------------------------------------------
............................................................................................................................................CAATCAATAAAGCAGAGTCCTG........................................................................................222.000.00-2.00-----------------------------------------------------------------------------------------------------------------------
............................AAGAAGGAGGAGACTGTAGCAAT.......................................................................................................................................................................................................232.000.002.00------------------------------------------------------------------------------------------------------------------------
......................................AGACTGTAGCAAGTAAGGCATAGAGAAC........................................................................................................................................................................................2812.002.00---------------------------------------------2.00---------------------------------------------------------------------------
....................................GGAGACTGTAGCAAGTAAGGCA................................................................................................................................................................................................2212.002.00-------------------------------1.001.00----------------------------------------------------------------------------------------
............................AAGAAGGAGGAGACTGTAGCAAGTAAGGCA................................................................................................................................................................................................3012.002.00----2.00--------------------------------------------------------------------------------------------------------------------
..............................GAAGGAGGAGACTGTAGCAAGTAAGGCAT...............................................................................................................................................................................................2912.002.00------------2.00------------------------------------------------------------------------------------------------------------
......................................AGACTGTAGCAAGTAAGGCATAGAG...........................................................................................................................................................................................2512.002.00--1.00----------1.00-----------------------------------------------------------------------------------------------------------
...........................................................................................................................................................................................................................TGGAATTACAGCAAAATGTGCTCAATGTAT.3012.002.00---2.00---------------------------------------------------------------------------------------------------------------------
...........................AAAGAAGGAGGAGACTGTA............................................................................................................................................................................................................1912.002.00--------------------------------1.00-----------------------------1.00----------------------------------------------------------
........................TCCAAAGAAGGAGGAGACTGTAG...........................................................................................................................................................................................................2312.002.00------------------2.00------------------------------------------------------------------------------------------------------
.................................GGAGGAGACTGTAGCAA........................................................................................................................................................................................................1712.002.00----1.00------------------------------------------------------------------------------------------1.00-------------------------
..........................CAAAGAAGGAGGAGACTGTAGCAA........................................................................................................................................................................................................2412.002.00-----------2.00-------------------------------------------------------------------------------------------------------------
...............................AAGGAGGAGACTGTAGCAAGGCG....................................................................................................................................................................................................232.000.00---------2.00---------------------------------------------------------------------------------------------------------------
.......................................................................................................................................AAGTGCAATCAATAAAGCAGAGTCCTG........................................................................................272.000.00---------------2.00---------------------------------------------------------------------------------------------------------
...........................AAAGAAGGAGGAGACTGTAGCAAG.......................................................................................................................................................................................................2412.002.00------------------------------------------------------------------------------------1.00--------------1.00---------------------
.............................................................................................................................ATTTTTAAAAAAGTGCAATTTTT......................................................................................................232.000.00----------------2.00--------------------------------------------------------------------------------------------------------
.................................GGAGGAGACTGTAGCAAGTAAGGCA................................................................................................................................................................................................2512.002.00--1.00----------------------------------1.00-----------------------------------------------------------------------------------
....................................................................................................................................................................................ACAGCCAGAGACAGACACTGTGCAGGCATCGC......................................322.000.00------------------------------------------------2.00------------------------------------------------------------------------
....................................GGAGACTGTAGCAAGGTG....................................................................................................................................................................................................182.000.001.00----------------------------------------------------------------------1.00-------------------------------------------------
...................................AGGAGACTGTAGCAAGTAAG...................................................................................................................................................................................................2012.002.00-------------------------1.00-------------------------------------------------------------------------------------1.00---------
............................AAGAAGGAGGAGACTGTAGCAAGGTG....................................................................................................................................................................................................262.000.00--------2.00----------------------------------------------------------------------------------------------------------------
...........................AAAGAAGGAGGAGACTGTAGCAAGTAAGGCA................................................................................................................................................................................................3112.002.00----2.00--------------------------------------------------------------------------------------------------------------------
...............................AAGGAGGAGACTGTAGCAAGTAAGGCATA..............................................................................................................................................................................................2912.002.00--1.00-------------------------------------------------------1.00--------------------------------------------------------------
..............................GAAGGAGGAGACTGTAGCAAGTAAGGC.................................................................................................................................................................................................2712.002.00--1.00-1.00--------------------------------------------------------------------------------------------------------------------
.............................................................................................GTCAAGCTAACAAGTGCATG.........................................................................................................................................202.000.00------------------------------1.00---------------------------------------1.00--------------------------------------------------
...................................................................................................................................AAAAAAGTGCAATCAATAAAGA.................................................................................................222.000.00-----1.00----------1.00--------------------------------------------------------------------------------------------------------
...........................AAAGAAGGAGGAGACTGTAGCAA........................................................................................................................................................................................................2312.002.002.00------------------------------------------------------------------------------------------------------------------------
....................................GGAGACTGTAGCAAGTAAGGC.................................................................................................................................................................................................2112.002.00------1.00----------------------------------------------------------------------------------1.00-------------------------------
..........................CAAAGAAGGAGGAGACTGTAGCAAG.......................................................................................................................................................................................................2512.002.00-----------1.00--------------------------------------------------------------------------------------------1.00----------------
........................TCCAAAGAAGGAGGAGACTGTAGCA.........................................................................................................................................................................................................2512.002.00---2.00---------------------------------------------------------------------------------------------------------------------
...................................................................................................................................................................CAAGAATGAGTAAGTTAACAGCCAGAGACA.........................................................3012.002.00---------------------------2.00---------------------------------------------------------------------------------------------
..........................................................................................................................................................................................AGAGACAGACACTGTGCAGGCATTGCA.....................................2712.002.00--2.00----------------------------------------------------------------------------------------------------------------------
........................................................................................................................................AGTGCAATCAATAAAGCAGAGTTCTG........................................................................................2612.002.00--------------------------2.00----------------------------------------------------------------------------------------------
........................................................................................................................................................................................CCAGAGACAGACACTGTGCAGGC...........................................2312.002.00----------------------2.00--------------------------------------------------------------------------------------------------
...................................AGGAGACTGTAGCAAGTAA....................................................................................................................................................................................................1912.002.00---1.00-----------------------------1.00---------------------------------------------------------------------------------------
..........................CAAAGAAGGAGGAGACTGTAGCA.........................................................................................................................................................................................................2312.002.00-----------1.00---------------------------1.00---------------------------------------------------------------------------------
....................................GGAGACTGTAGCAAGTAAGGCGT...............................................................................................................................................................................................2311.002.00---------------------1.00---------------------------------------------------------------------------------------------------
................................AGGAGGAGACTGTAGCAAGCAA....................................................................................................................................................................................................221.000.00---------------1.00---------------------------------------------------------------------------------------------------------
...........................AAAGAAGGAGGAGACTGTAGCAAGTAAG...................................................................................................................................................................................................2811.001.00--1.00----------------------------------------------------------------------------------------------------------------------
..................................................GTAAGGCATAGAGAACACTT....................................................................................................................................................................................2011.001.00--1.00----------------------------------------------------------------------------------------------------------------------
...............................AAGGAGGAGACTGTAGCAAGTAAGGCATAG.............................................................................................................................................................................................3011.001.00----1.00--------------------------------------------------------------------------------------------------------------------
...........................AAAGAAGGAGGAGACTGTAGCAAGTAAGGCAT...............................................................................................................................................................................................3211.001.00-----------------1.00-------------------------------------------------------------------------------------------------------
.......................................................................................................................................AAGTGCAATCAATAAAGCAGAGTTCTG........................................................................................2711.001.00---------------1.00---------------------------------------------------------------------------------------------------------
............................AAGAAGGAGGAGACTGTA............................................................................................................................................................................................................1811.001.00----------------------------------------------------------------------------------1.00--------------------------------------
............................................................................................................................................CAATCAATAAAGCAGAGTTCCG........................................................................................221.000.00-1.00-----------------------------------------------------------------------------------------------------------------------
.....................................................................................................................................................................AGAATGAGTAAGTTAACAGCCAGAGACA.........................................................2811.001.00--------------------------------------------------------------------------1.00----------------------------------------------
................................AGGAGGAGACTGTAGCAAGTAAGGCT................................................................................................................................................................................................2611.001.00-------------------------------------------1.00-----------------------------------------------------------------------------
............ACGGGAATCCTCTCCAAAGAAGGAGGA...................................................................................................................................................................................................................2711.001.00--------------------------------------------1.00----------------------------------------------------------------------------
.................................GGAGGAGACTGTAGCAAGTAAGGCATAGAGAAC........................................................................................................................................................................................3311.001.00----1.00--------------------------------------------------------------------------------------------------------------------
................................AGGAGGAGACTGTAGCAAGTAAG...................................................................................................................................................................................................2311.001.00---1.00---------------------------------------------------------------------------------------------------------------------
............................AAGAAGGAGGAGACTGTAGCAAGTAAGGCATAGAGAACACTTGCTTTTT.............................................................................................................................................................................491.000.00----------1.00--------------------------------------------------------------------------------------------------------------
.....................................................................................................................................................................................CAGCCAGAGACAGACACTGTGCA..............................................2311.001.00--------1.00----------------------------------------------------------------------------------------------------------------
..................................GAGGAGACTGTAGCAAGGTGT...................................................................................................................................................................................................211.000.00---------------------------------------------------------------------------------------1.00---------------------------------
................................AGGAGGAGACTGTAGCAAGTAAGGC.................................................................................................................................................................................................2511.001.00----------------------------------1.00--------------------------------------------------------------------------------------
.........................CCAAAGAAGGAGGAGACTGTAGCAAAAA.....................................................................................................................................................................................................2811.0011.00-----------1.00-------------------------------------------------------------------------------------------------------------
............................................................................................................................................................................................AGACAGACACTGTGCAGGCATCGC......................................241.000.00---------1.00---------------------------------------------------------------------------------------------------------------
......ACCATTACGGGAATCCTCTCCAAAGAAGGAGG....................................................................................................................................................................................................................3211.001.00----------------------------------------------------------------------------------------------------1.00--------------------
......................TCTCCAAAGAAGGAGGAGACTGTAGC..........................................................................................................................................................................................................2611.001.00---1.00---------------------------------------------------------------------------------------------------------------------
.........................................CTGTAGCAAGTAAGGC.................................................................................................................................................................................................1611.001.00------------------------------------------------------------------1.00------------------------------------------------------
...............................AAGGAGGAGACTGTAGCAAGTAAGGC.................................................................................................................................................................................................2611.001.00----------------------------------1.00--------------------------------------------------------------------------------------
.......................................................................................................................................AAGTGCAATCAATAAAGCAGAGTTCCG........................................................................................271.000.00-1.00-----------------------------------------------------------------------------------------------------------------------
..............................................................................................TCAAGCTAACAAGTGTGAAA........................................................................................................................................2011.001.00---------------------------------------------------------------------------------------------------------1.00---------------
..................................GAGGAGACTGTAGCAAGTAAGG..................................................................................................................................................................................................2211.001.00-----------------------------------------1.00-------------------------------------------------------------------------------
....................................GGAGACTGTAGCAAGTAAGGCATAGAGAACACTT....................................................................................................................................................................................3411.001.00------------1.00------------------------------------------------------------------------------------------------------------
.............................AGAAGGAGGAGACTGTAGCAAGTAAGGCA................................................................................................................................................................................................2911.001.00--------------1.00----------------------------------------------------------------------------------------------------------
....................................................................................................................................AAAAAGTGCAATCAATAAAG..................................................................................................2011.001.00-1.00-----------------------------------------------------------------------------------------------------------------------
.............................................................................................................................................AATCAATAAAGCAGAGTTCAG........................................................................................211.000.00--------------------------------------1.00----------------------------------------------------------------------------------
.............................AGAAGGAGGAGACTGTAGCAAGTAAG...................................................................................................................................................................................................2611.001.00------1.00------------------------------------------------------------------------------------------------------------------
...............................AAGGAGGAGACTGTAGCAAGTAAGGGT................................................................................................................................................................................................2711.005.00-------------------------------------------1.00-----------------------------------------------------------------------------
............................................................................................................................................CAATCAATAAAGCAGAGTTCTGTC......................................................................................2411.001.00-----------------------1.00-------------------------------------------------------------------------------------------------
...................................................................................................................................................TAAAGCAGAGTTCTGTCAA....................................................................................1911.001.00-------------------1.00-----------------------------------------------------------------------------------------------------
................................AGGAGGAGACTGTAGCAAGTAAGGG.................................................................................................................................................................................................251.000.00---------------------------------------------------------------------------------1.00---------------------------------------
.............................................................................................................................................................................................................GCATTGCAAATAGATGGAATTACA.....................2411.001.00----------------------------1.00--------------------------------------------------------------------------------------------
..........................CAAAGAAGGAGGAGACTGTAGCAAGC......................................................................................................................................................................................................2611.002.001.00------------------------------------------------------------------------------------------------------------------------
.............................AGAAGGAGGAGACTGTAGCAAGGTG....................................................................................................................................................................................................251.000.00--------------------------------------------------------1.00----------------------------------------------------------------
.......................CTCCAAAGAAGGAGGAGACTGTA............................................................................................................................................................................................................2311.001.00---------------------1.00---------------------------------------------------------------------------------------------------
.........................CCAAAGAAGGAGGAGACTGTAGCAATT......................................................................................................................................................................................................2711.0011.001.00------------------------------------------------------------------------------------------------------------------------
................................AGGAGGAGACTGTAGCAAGGTG....................................................................................................................................................................................................221.000.00---------1.00---------------------------------------------------------------------------------------------------------------
.........................................................................................................................................................................................CAGAGACAGACACTGTGCAGGCAT.........................................2411.001.00----------------------------------------------------------------1.00--------------------------------------------------------
......................................AGACTGTAGCAAGTAAGGC.................................................................................................................................................................................................1911.001.00-----------------------1.00-------------------------------------------------------------------------------------------------
...................................AGGAGACTGTAGCAAGGTG....................................................................................................................................................................................................191.000.00------------------------------------------------------1.00------------------------------------------------------------------
............ACGGGAATCCTCTCCAA.............................................................................................................................................................................................................................1711.001.00----------------------------------------------1.00--------------------------------------------------------------------------
...................................................TAAGGCATAGAGAACAC......................................................................................................................................................................................1711.001.00--------------------------------------------------------------------------------------1.00----------------------------------
............................................................................................GGTCAAGCTAACAAGTGC............................................................................................................................................181.000.00-------------------------------------------------------------------------1.00-----------------------------------------------
....................................................AAGGCATAGAGAACACTTG...................................................................................................................................................................................1911.001.00----------------------------------------------------------------------------1.00--------------------------------------------
.......................................................................................................................................AAGTGCAATCAATAAAGCAGAGTTCT.........................................................................................2611.001.00-1.00-----------------------------------------------------------------------------------------------------------------------
....................................................AAGGCATAGAGAACACTT....................................................................................................................................................................................1811.001.00-----------------------------------------------------------------------------------1.00-------------------------------------
..............GGGAATCCTCTCCAAAGAAG........................................................................................................................................................................................................................2011.001.00--------------------------------------------------------------------1.00----------------------------------------------------
.................................GGAGGAGACTGTAGCAAGTAAGGCAT...............................................................................................................................................................................................2611.001.00-----------------------------------------------------------------------------------------------------1.00-------------------
.......................CTCCAAAGAAGGAGGAGACTGTAGCAA........................................................................................................................................................................................................2711.001.00-----------------------------1.00-------------------------------------------------------------------------------------------
.................................GGAGGAGACTGTAGCAAGTAAGGCATAG.............................................................................................................................................................................................2811.001.00----------------------------------------------------------------------------------------------------------1.00--------------
..........................CAAAGAAGGAGGAGACTGTAGCAAGTAAGG..................................................................................................................................................................................................3011.001.00-----------------------------1.00-------------------------------------------------------------------------------------------
..............................GAAGGAGGAGACTGTAGCAAGG......................................................................................................................................................................................................221.000.001.00------------------------------------------------------------------------------------------------------------------------
............................AAGAAGGAGGAGACTGTAGCAAGTA.....................................................................................................................................................................................................2511.001.00------------------------------------------------------------------------------------------1.00------------------------------
....................................................AAGGCATAGAGAACACTTGCTC................................................................................................................................................................................2211.001.00--------1.00----------------------------------------------------------------------------------------------------------------
.............................AGAAGGAGGAGACTGTAGCAAATA.....................................................................................................................................................................................................2411.008.00--1.00----------------------------------------------------------------------------------------------------------------------
........................TCCAAAGAAGGAGGAGACTGTAGCAAGTAAGG..................................................................................................................................................................................................3211.001.00-------------------------------------------------------1.00-----------------------------------------------------------------
...............................AAGGAGGAGACTGTAGCA.........................................................................................................................................................................................................1811.001.00---------------------------------------------------------------------------1.00---------------------------------------------
............................AAGAAGGAGGAGACTGTAGCAAGGT.....................................................................................................................................................................................................251.000.00-----------------------------------------------------------------------------------------------------------1.00-------------
..........................................................................................................................................................................................AGAGACAGACACTGTGCA..............................................1821.001.00-------------1.00-----------------------------------------------------------------------------------------------------------
..........................................................................................................................................................................................AGAGACAGACACTGTGCAGGCATT........................................2411.001.00-----------------------1.00-------------------------------------------------------------------------------------------------
...................................AGGAGACTGTAGCAAGTAAGGCAT...............................................................................................................................................................................................2411.001.001.00------------------------------------------------------------------------------------------------------------------------
.............................AGAAGGAGGAGACTGTAGCAAGGCG....................................................................................................................................................................................................251.000.00---------1.00---------------------------------------------------------------------------------------------------------------
.....................................GAGACTGTAGCAAGTAAGGCAT...............................................................................................................................................................................................2211.001.00-------------1.00-----------------------------------------------------------------------------------------------------------
...............................................................................................................................................................................................................ATTGCAAATAGATGGAATTACA.....................2211.001.00---------------------------------------------------------1.00---------------------------------------------------------------
..........................CAAAGAAGGAGGAGACTGTAGCAAGTAAGGCA................................................................................................................................................................................................3211.001.00-------------------------------------------------------1.00-----------------------------------------------------------------
............................................................................................................................................CAATCAATAAAGCAGAGTTCTG........................................................................................2211.001.00-1.00-----------------------------------------------------------------------------------------------------------------------
........................................................................................................................................................................................CCAGAGACAGACACTAGA................................................181.000.00------1.00------------------------------------------------------------------------------------------------------------------
.........................................................................................................................................GTGCAATCAATAAAGCAGAGTTCTG........................................................................................2511.001.00---------------1.00---------------------------------------------------------------------------------------------------------
...............................AAGGAGGAGACTGTAGCAAGGTG....................................................................................................................................................................................................231.000.00---------1.00---------------------------------------------------------------------------------------------------------------
..............GGGAATCCTCTCCAAAGAAGG.......................................................................................................................................................................................................................2111.001.00--------------------------------------------------------------------------------------------1.00----------------------------
...................................................................................................................................................................CAAGAATGAGTAAGTTAACAGCCAGAGACAGACACTGTGCAGGCATTGCAAATAGATGGAATTACAGCAAAATGA............751.000.00--------------------------------------------------------------------------------------------------1.00----------------------
..........................................................................................................................................................GAGTTCTGTCAAGAATGAGTA...........................................................................2111.001.00----------------------------------------------------------------------------------------------1.00--------------------------
...................................................TAAGGCATAGAGAACACTT....................................................................................................................................................................................1911.001.00-----------------------------------1.00-------------------------------------------------------------------------------------
..........................CAAAGAAGGAGGAGACTGTAGC..........................................................................................................................................................................................................2211.001.00-------------------------1.00-----------------------------------------------------------------------------------------------
.........................................................................CTTATACCCTAGTGGTGGCGGT...........................................................................................................................................................2211.001.00--------------------------------------------------------------------------------1.00----------------------------------------
................................................AAGTAAGGCATAGAGAACACTCTC..................................................................................................................................................................................2411.001.00---1.00---------------------------------------------------------------------------------------------------------------------
......................................AGACTGTAGCAAGTAAGGGC................................................................................................................................................................................................2011.001.00----------------------------------------------------1.00--------------------------------------------------------------------
................................................AAGTAAGGCATAGAGAACACT.....................................................................................................................................................................................2111.001.00--------------1.00----------------------------------------------------------------------------------------------------------
.....................................GAGACTGTAGCAAGTAAGGCATA..............................................................................................................................................................................................2311.001.00-------------1.00-----------------------------------------------------------------------------------------------------------
......................................AGACTGTAGCAAGTAAGG..................................................................................................................................................................................................1811.001.00------------------------------------------------------------------------------1.00------------------------------------------
.............................AGAAGGAGGAGACTGTAA...........................................................................................................................................................................................................1811.002.00---------------------------------------------------------------------1.00---------------------------------------------------
...........TACGGGAATCCTCTCCAA.............................................................................................................................................................................................................................1811.001.00--------------1.00----------------------------------------------------------------------------------------------------------
................................AGGAGGAGACTGTAGCAAGTAAGGT.................................................................................................................................................................................................251.000.00----------------------------------------------1.00--------------------------------------------------------------------------
.............................................................................................GTCAAGCTAACAAGTGCAT..........................................................................................................................................191.000.00------------------------------1.00------------------------------------------------------------------------------------------
..............................GAAGGAGGAGACTGTAGCAAGTAAGG..................................................................................................................................................................................................2611.001.00---------------------------------------------------------------1.00---------------------------------------------------------
..............................................................................................................................TTTTTAAAAAAGTGCAATCAAAAAG...................................................................................................251.000.00-1.00-----------------------------------------------------------------------------------------------------------------------
.......................................................................CTCTTATACCCTAGTGGTGGCGGTC..........................................................................................................................................................2511.001.00--------------------------1.00----------------------------------------------------------------------------------------------
.............................................................................................................................................AATCAATAAAGCAGAGTTCTG........................................................................................2111.001.00--------------------------------------1.00----------------------------------------------------------------------------------
.............................AGAAGGAGGAGACTGTAG...........................................................................................................................................................................................................1811.001.00---1.00---------------------------------------------------------------------------------------------------------------------
............................AAGAAGGAGGAGACTGTAGCAAGTAAGGC.................................................................................................................................................................................................2911.001.00---1.00---------------------------------------------------------------------------------------------------------------------
....................................GGAGACTGTAGCAAGTAAGGCAT...............................................................................................................................................................................................2311.001.00---------------------------------------------------1.00---------------------------------------------------------------------
...................................AGGAGACTGTAGCAAGTAAGGCATAGAGAAC........................................................................................................................................................................................3111.001.00------------1.00------------------------------------------------------------------------------------------------------------
................................................................................................................................................CAATAAAGCAGAGTTCCG........................................................................................181.000.00-1.00-----------------------------------------------------------------------------------------------------------------------
..............................GAAGGAGGAGACTGTAGCAAGTAAAGCA................................................................................................................................................................................................281.000.00----1.00--------------------------------------------------------------------------------------------------------------------
........................................................................................................................................................................................CCAGAGACAGACACTGTGCAGGCACTGC......................................281.000.00---------1.00---------------------------------------------------------------------------------------------------------------
...........................AAAGAAGGAGGAGACTGTAGCAATT......................................................................................................................................................................................................2511.002.00-------------------------------------------------------------1.00-----------------------------------------------------------
.................................GGAGGAGACTGTAGCAAGTAAGGCATAGA............................................................................................................................................................................................2911.001.00--1.00----------------------------------------------------------------------------------------------------------------------
..........................................................................................................................................................................................AGAGACAGACACTGTGCAGGCATTGC......................................2611.001.00--1.00----------------------------------------------------------------------------------------------------------------------
............................................................................................................................CATTTTTAAAAAAGTGCAATCAAAAAA...................................................................................................271.000.00-1.00-----------------------------------------------------------------------------------------------------------------------
..........................CAAAGAAGGAGGAGACTGTAGCAAGTA.....................................................................................................................................................................................................2711.001.00------------------------------------------1.00------------------------------------------------------------------------------
...........................AAAGAAGGAGGAGACTGTAGCAAGTAAGGCATA..............................................................................................................................................................................................3311.001.00----1.00--------------------------------------------------------------------------------------------------------------------
...........................AAAGAAGGAGGAGACTGTAGCAAGT......................................................................................................................................................................................................2511.001.001.00------------------------------------------------------------------------------------------------------------------------
................................AGGAGGAGACTGTAGCAAGTAAGGTT................................................................................................................................................................................................261.000.00-----------------------------------------------------1.00-------------------------------------------------------------------
...................................AGGAGACTGTAGCAAGTAAGGCATAGAGAACA.......................................................................................................................................................................................3211.001.00------------1.00------------------------------------------------------------------------------------------------------------
.CCGTTACCATTACGGGAATC.....................................................................................................................................................................................................................................2011.001.00-------------------------------------------------------------------------------------1.00-----------------------------------
..........................................................................................................................................................................................AGAGACAGACACTGTGCAGGCATTG.......................................2511.001.00--1.00----------------------------------------------------------------------------------------------------------------------
..............................................................................................................................................ATCAATAAAGCAGAGTTCTGTC......................................................................................2211.001.00----------------------------------------------------------------------------------------1.00--------------------------------
.....................................................................................................................................................................................................CTGTGCAGGCATTGCAAATAGATGGA...........................2611.001.00----------------------------1.00--------------------------------------------------------------------------------------------
................................AGGAGGAGACTGTAG...........................................................................................................................................................................................................1590.560.56----0.11-------------------0.33-----------------------------------------------------------------------------------------------0.11
...............................AAGGAGGAGACTGTAG...........................................................................................................................................................................................................1640.500.50----0.25-------------------0.25------------------------------------------------------------------------------------------------
.......................................................................................................................................AAGTGCAATCAATAAAG..................................................................................................1720.500.50--------------------------0.50----------------------------------------------------------------------------------------------
.............................................................................................GTCAAGCTAACAAGT..............................................................................................................................................1560.500.50-----0.17----------0.33--------------------------------------------------------------------------------------------------------
................................................................................................................................TTTAAAAAAGTGCAATCAAAAG....................................................................................................2220.500.50----------------0.50--------------------------------------------------------------------------------------------------------
................................................................................................................................TTTAAAAAAGTGCAATCAA.......................................................................................................1920.500.50-------------------------------------------------------------------------------------------------------------------0.50-----
........................TCCAAAGAAGGAGGAGA.................................................................................................................................................................................................................1720.500.50-----------------------------------------------------------------------------------------------------------------0.50-------
...........................AAAGAAGGAGGAGACTGT.............................................................................................................................................................................................................1820.500.50--------------------------------------------------------------------------------------------------------------------0.50----
...........................AAAGAAGGAGGAGACTG..............................................................................................................................................................................................................1750.400.40--------------------------------------------------------0.20------------------------------------------------------------0.20---
............................AAGAAGGAGGAGACTGT.............................................................................................................................................................................................................1730.330.33-----------------0.33-------------------------------------------------------------------------------------------------------
.............................AGAAGGAGGAGACTGT.............................................................................................................................................................................................................1680.120.12-----------------------------------------------------------------------------------------------------------------------0.12-
................................AGGAGGAGACTGTAGGTC........................................................................................................................................................................................................1890.110.56-------------------------0.11-----------------------------------------------------------------------------------------------
................................AGGAGGAGACTGTAGGTT........................................................................................................................................................................................................1890.110.560.11------------------------------------------------------------------------------------------------------------------------
..................................GAGGAGACTGTAGCA.........................................................................................................................................................................................................1590.110.11----0.11--------------------------------------------------------------------------------------------------------------------

Antisense strand
ACCGTTACCATTACGGGAATCCTCTCCAAAGAAGGAGGAGACTGTAGCAAGTAAGGCATAGAGAACACTTGCTCTTATACCCTAGTGGTGGCGGTCAAGCTAACAAGTGTGAAAATGCCTTTGGCATTTTTAAAAAAGTGCAATCAATAAAGCAGAGTTCTGTCAAGAATGAGTAAGTTAACAGCCAGAGACAGACACTGTGCAGGCATTGCAAATAGATGGAATTACAGCAAAATGTGCTCAATGTATT
....................................................(((((((.....(((((((.........((....)).(((......)))..)))))))....)))))))..(((((((....))))))).............................................................................................................
..................................................51.....................................................................................................154..............................................................................................
SizePerfect hitTotal NormPerfect NormSRR207115(GSM721077)
XRN1&2 knockdown. (XRN1/XRN2 cell line)		SRR189784SRR039622(GSM531985)
HCV(+) Adjacent Tissue Sample. (liver)		SRR553576(SRX182782)
source: Testis. (testes)		SRR553572(SRX182778)
source: Frontal Cortex. (Frontal Cortex)		SRR343335SRR039620(GSM531983)
HBV(+) Adjacent Tissue Sample 2. (liver)		SRR033712(GSM497057)
Burkitt Lymphoma (BL510). (B cell)		SRR039625(GSM531988)
HBV(-) HCV(-) HCC Tissue Sample. (liver)		SRR189779(GSM714639)
cell line: HEK293clip variant: PAR-CLIPenzyma. (cell line)		DRR001486(DRX001040)
"Hela long cytoplasmic cell fraction, LNA(+)". (hela)		SRR326282(GSM769512)
"Dicer mRNA was knocked down using siDicer, t. (cell line)		RoviraIPAgo2(Rovira)
total RNA. (ago2 breast)		SRR039623(GSM531986)
HCV(+) HCC Tissue Sample. (liver)		SRR342899(SRX096795)
small RNA seq of Left atrial tissue. (heart)		SRR189786SRR343334SRR342901(SRX096797)
small RNA seq of Left atrial tissue. (heart)		GSM1105748AGO1(GSM1105748)
small RNA sequencing data. (ago1 hela)		GSM450601(GSM450601)
miRNA sequencing raw reads from post-mortem s. (brain)		GSM450602(GSM450602)
miRNA sequencing raw reads from post-mortem s. (brain)		GSM450599(GSM450599)
miRNA sequencing raw reads from post-mortem s. (brain)		SRR207116(GSM721078)
Nuclear RNA. (cell line)		GSM450605(GSM450605)
miRNA sequencing raw reads from post-mortem s. (brain)		SRR342897(SRX096793)
small RNA seq of Left atrial tissue. (heart)		SRR330913(SRX091751)
tissue: normal skindisease state: normal. (skin)		SRR189782SRR330879(SRX091717)
tissue: skin psoriatic involveddisease state:. (skin)		SRR342894(SRX096790)
small RNA seq of Right atrial tissue. (heart)		SRR553573(SRX182779)
source: Cerebellum. (Cerebellum)		SRR189785SRR033727(GSM497072)
HIV-positive DL (HIV412). (B cell)		GSM450610(GSM450610)
miRNA sequencing raw reads from post-mortem s. (brain)		SRR033715(GSM497060)
Mantle Cell Lymphoma (Mino122). (B cell)		SRR342900(SRX096796)
small RNA seq of Right atrial tissue. (heart)		SRR342896(SRX096792)
small RNA seq of Right atrial tissue. (heart)		SRR326281(GSM769511)
"Dicer mRNA was knocked down using siDicer, c. (cell line)		SRR330865(SRX091703)
tissue: skin psoriatic involveddisease state:. (skin)		SRR039191(GSM494810)
PBMCs were isolated by ficoll gradient from t. (blood)		SRR326279(GSM769509)
cytoplasmic fraction was isolated using PARIS. (cell line)		SRR330885(SRX091723)
tissue: skin psoriatic uninvolveddisease stat. (skin)		GSM450609(GSM450609)
miRNA sequencing raw reads from post-mortem s. (brain)		SRR330864(SRX091702)
tissue: skin psoriatic involveddisease state:. (skin)		SRR060984(GSM569188)
Human plasma cell [09-001]. (cell line)		SRR207118(GSM721080)
RRP40 knockdown. (RRP40 cell line)		SRR039612(GSM531975)
Human Normal Liver Tissue Sample 2. (liver)		TAX577739(Rovira)
total RNA. (breast)		SRR207114(GSM721076)
"IP against AGO 1 & 2, RRP40 knockdown". (ago1/2 RRP40 cell line)		SRR189780(GSM714640)
cell line: HEK293clip variant: PAR-CLIPenzyma. (cell line)		SRR107296(GSM677703)
18-30nt fraction of small RNA. (cell line)		SRR326280(GSM769510)
total cell content of unperturbed cells was s. (cell line)		SRR342898(SRX096794)
small RNA seq of Right atrial tissue. (heart)		SRR033723(GSM497068)
L1236 cell line (L1236). (B cell)		SRR330878(SRX091716)
tissue: skin psoriatic involveddisease state:. (skin)		GSM450598(GSM450598)
miRNA sequencing raw reads from post-mortem s. (brain)		SRR207119(GSM721081)
XRN1&2 knockdown. (XRN1/XRN2 cell line)		TAX577745(Rovira)
total RNA. (breast)		SRR191605(GSM715715)
76genomic small RNA (size selected RNA from t. (breast)		DRR001488(DRX001042)
"Hela short nuclear cell fraction, LNA(+)". (hela)		SRR330872(SRX091710)
tissue: skin psoriatic involveddisease state:. (skin)		SRR039616(GSM531979)
HBV(+) Distal Tissue Sample 1. (liver)		GSM450606(GSM450606)
miRNA sequencing raw reads from post-mortem s. (brain)		SRR029054(GSM402329)
MCF7_smallRNAseq. (cell line)		TAX577580(Rovira)
total RNA. (breast)		SRR060983(GSM569187)
Human pre-germinal center B cell [09-001]. (cell line)		SRR330883(SRX091721)
tissue: skin psoriatic uninvolveddisease stat. (skin)		SRR330908(SRX091746)
tissue: normal skindisease state: normal. (skin)		DRR000555(DRX000313)
"THP-1 whole cell RNA, no treatment". (cell line)		GSM532876(GSM532876)
G547T. (cervix)		SRR039614(GSM531977)
HBV-infected Liver Tissue. (liver)		SRR189787SRR039190(GSM494809)
PBMCs were isolated by ficoll gradient from t. (blood)		DRR000557(DRX000315)
"THP-1 whole cell RNA, after 3 day treatment . (cell line)		SRR189783SRR330863(SRX091701)
tissue: skin psoriatic involveddisease state:. (skin)		SRR033717(GSM497062)
Mentle Cell Lymphoma (MCL112). (B cell)		SRR330922(SRX091760)
tissue: normal skindisease state: normal. (skin)		SRR039618(GSM531981)
HBV(+) Side Tissue Sample 1. (liver)		SRR330910(SRX091748)
tissue: normal skindisease state: normal. (skin)		SRR330903(SRX091741)
tissue: skin psoriatic uninvolveddisease stat. (skin)		SRR037937(GSM510475)
293cand2. (cell line)		SRR015364(GSM380329)
Plasma B cells (PC44). (B cell)		SRR039192(GSM494811)
K562 cell line is derived from a CML patient . (cell line)		SRR033721(GSM497066)
Ly3 cell line (Ly3). (B cell)		SRR060982(GSM569186)
Human centrocyte [09-001]. (cell line)		SRR095854(SRX039177)
"miRNA were isolated from FirstChoice Human B. (brain)		GSM450603(GSM450603)
miRNA sequencing raw reads from post-mortem s. (brain)		TAX577741(Rovira)
total RNA. (breast)		SRR015447(SRR015447)
nuclear small RNAs. (breast)		SRR330899(SRX091737)
tissue: skin psoriatic uninvolveddisease stat. (skin)		SRR330919(SRX091757)
tissue: normal skindisease state: normal. (skin)		SRR038859(GSM458542)
MM386. (cell line)		SRR330901(SRX091739)
tissue: skin psoriatic uninvolveddisease stat. (skin)		SRR039635(GSM518472)
THP1_nuc_sRNAs. (cell line)		SRR191411(GSM715521)
21genomic small RNA (size selected RNA from t. (breast)		DRR000559(DRX000317)
"THP-1 whole cell RNA, no treatment". (cell line)		DRR001489(DRX001043)
"Hela short nuclear cell fraction, control". (hela)		SRR330868(SRX091706)
tissue: skin psoriatic involveddisease state:. (skin)		DRR001483(DRX001037)
"Hela long cytoplasmic cell fraction, control. (hela)		TAX577579(Rovira)
total RNA. (breast)		SRR330870(SRX091708)
tissue: skin psoriatic involveddisease state:. (skin)		SRR060168(GSM565978)
5-8F_nucleus. (cell line)		SRR330915(SRX091753)
tissue: normal skindisease state: normal. (skin)		SRR015360(GSM380325)
Plasma B cells (PC137). (B cell)		SRR363673(GSM830250)
cell type: human foreskin fibroblasts (HFF)tr. (fibroblast)		SRR040024(GSM532909)
G613N. (cervix)		SRR038862(GSM458545)
MM472. (cell line)		GSM956925Paz8D5(GSM956925)
"cell line: HEK293 cell linepassages: 15-20ip. (cell line)		SRR330876(SRX091714)
tissue: skin psoriatic involveddisease state:. (skin)		SRR330916(SRX091754)
tissue: normal skindisease state: normal. (skin)		SRR033729(GSM497074)
splenic MZL (Splenic414). (B cell)		SRR060981(GSM569185)
Human centroblast [09-001]. (cell line)		TAX577743(Rovira)
total RNA. (breast)		SRR444049(SRX128897)
Sample 9cDNABarcode: AF-PP-334: ACG CTC TTC C. (skin)		SRR444060(SRX128908)
Sample 18cDNABarcode: AF-PP-340: ACG CTC TTC . (skin)		SRR040010(GSM532895)
G529N. (cervix)		SRR060169(GSM565979)
5-8F_cytoplasm. (cell line)		TAX577453(Rovira)
total RNA. (breast)		SRR330909(SRX091747)
tissue: normal skindisease state: normal. (skin)		SRR330867(SRX091705)
tissue: skin psoriatic involveddisease state:. (skin)		SRR553575(SRX182781)
source: Kidney. (Kidney)
........................................................................................................................................................................................TGCAATGCCTGCACAGTGTCTGTCTCTGG..................................... 2911.001.00-----------------------------------------------------------------1.00-------------------------------------------------------
........................................................................................................................................................................................................................AGATGGAATTACAGCACCAA.............. 201.000.00------------------------------1.00------------------------------------------------------------------------------------------
...............................................................................ACACTTGTTAGCTTGACCGCCACCACTAGGG............................................................................................................................................ 3111.001.00---------1.00---------------------------------------------------------------------------------------------------------------
......................................................AGTGTTCTCTATGCC..................................................................................................................................................................................... 1550.600.60------------------------------------------------------------------------------------------------------------------0.60------
........................................................................................................................................................TCTTGACAGAACTCTG.................................................................................. 1620.500.50-------------------------0.50-----------------------------------------------------------------------------------------------
..............................TACAGTCTCCTCCTTC............................................................................................................................................................................................................ 1620.500.50-0.50-----------------------------------------------------------------------------------------------------------------------
......................................................................................................................................................................................................................................CATTGAGCACATTTTG.... 1670.290.29-----------------------------------------------------------------------------------------------------------------0.29-------
........................................................................................................................................................CTTGACAGAACTCTG................................................................................... 1570.290.29------------------------0.14---------------------------------------------------------------------------------------------0.14--