ID: uc002htb.2_intron_2_0_chr17_37934264_r.3p
GENE: (6)
chr17:37934214-37934463-


(11)
B-CELL
(9)
BREAST
(7)
CELL-LINE
(3)
CERVIX
(1)
HEART
(5)
LIVER
(2)
OTHER
(3)
SKIN

Sense strand
TTAACATAAACAGAGCAGTAAATCTGGGGCACCATGCTTTTTTTTCAAAGTTGTTAAGAATTATATCAGTCTGCAGGTGTCACACGCAGTTACTCAGAATCAGAAAGAAGGCTGATCGGGGGTTAGATCTCCATCTATCTATCTTTTTGCAACCAACCACGTCCAGGCTGTTTATTTAATACTTCCTCTTGCTAATGAAGGTACTGGTTGGGGATGGGTCGAGCTTTCCCATCTCGGCATAAGACTGCAA
......................................................................((((..(((...)))))))..((((...(((((........)))))...))))...............................................................................................................................
..................................................51......................................................................123.............................................................................................................................
SizePerfect hitTotal NormPerfect NormSRR189784SRR033728(GSM497073)
MALT (MALT413). (B cell)
SRR039615(GSM531978)
Severe Chronic Hepatitis B Liver Tissue. (liver)
SRR039622(GSM531985)
HCV(+) Adjacent Tissue Sample. (liver)
SRR387909(GSM843861)
specific-host: Homo sapienshost cell line: Su. (cell line)
SRR060984(GSM569188)
Human plasma cell [09-001]. (cell line)
SRR033716(GSM497061)
Mentle Cell Lymphoma (MCL114). (B cell)
SRR033727(GSM497072)
HIV-positive DL (HIV412). (B cell)
SRR191615(GSM715725)
94genomic small RNA (size selected RNA from t. (breast)
SRR039623(GSM531986)
HCV(+) HCC Tissue Sample. (liver)
SRR040015(GSM532900)
G623T. (cervix)
SRR191410(GSM715520)
20genomic small RNA (size selected RNA from t. (breast)
SRR033712(GSM497057)
Burkitt Lymphoma (BL510). (B cell)
SRR191614(GSM715724)
92genomic small RNA (size selected RNA from t. (breast)
SRR033718(GSM497063)
Multiple Myeloma (U266). (B cell)
SRR060983(GSM569187)
Human pre-germinal center B cell [09-001]. (cell line)
SRR040010(GSM532895)
G529N. (cervix)
SRR033717(GSM497062)
Mentle Cell Lymphoma (MCL112). (B cell)
SRR033710(GSM497055)
GCB DLBCL (GCB385). (B cell)
SRR191556(GSM715666)
45genomic small RNA (size selected RNA from t. (breast)
SRR191606(GSM715716)
84genomic small RNA (size selected RNA from t. (breast)
SRR040036(GSM532921)
G243N. (cervix)
SRR191565(GSM715675)
92genomic small RNA (size selected RNA from t. (breast)
SRR191589(GSM715699)
69genomic small RNA (size selected RNA from t. (breast)
SRR037937(GSM510475)
293cand2. (cell line)
SRR191631(GSM715741)
75genomic small RNA (size selected RNA from t. (breast)
SRR189785SRR033721(GSM497066)
Ly3 cell line (Ly3). (B cell)
SRR189779(GSM714639)
cell line: HEK293clip variant: PAR-CLIPenzyma. (cell line)
SRR330902(SRX091740)
tissue: skin psoriatic uninvolveddisease stat. (skin)
SRR060986(GSM569190)
Human memory B cell [09-001]. (cell line)
SRR330866(SRX091704)
tissue: skin psoriatic involveddisease state:. (skin)
SRR191550(GSM715660)
27genomic small RNA (size selected RNA from t. (breast)
SRR033711(GSM497056)
GCB DLBCL (GCB110). (B cell)
SRR444044(SRX128892)
Sample 5cDNABarcode: AF-PP-340: ACG CTC TTC C. (skin)
SRR039614(GSM531977)
HBV-infected Liver Tissue. (liver)
SRR342894(SRX096790)
small RNA seq of Right atrial tissue. (heart)
SRR039618(GSM531981)
HBV(+) Side Tissue Sample 1. (liver)
SRR033730(GSM497075)
Lymphoblastic (ALL411). (B cell)
SRR033729(GSM497074)
splenic MZL (Splenic414). (B cell)
SRR189780(GSM714640)
cell line: HEK293clip variant: PAR-CLIPenzyma. (cell line)
...........................................................ATTATATCAGTCTGCACTTG...........................................................................................................................................................................2018.000.0017.00-------------------------1.00--------------
..............................................................................................................GCTGATCGGGGGTTAGAT..........................................................................................................................1817.007.00-5.00-----------------1.00------------1.00--------
.....................................................................................................AGAAAGAAGGCTGATCGG...................................................................................................................................1823.503.50-1.501.00---------1.00----------------------------
...........................................................................................................AAGGCTGATCGGGGG................................................................................................................................1513.003.00----3.00------------------------------------
..................................................................................................ATCAGAAAGAAGGCTGAT......................................................................................................................................1822.502.50-0.501.50---------------------------------0.50----
................................................................................................GAATCAGAAAGAAGGCTGATCGGGGGTT..............................................................................................................................2812.002.00---2.00-------------------------------------
......................................................................................................................................................................................................AGGTACTGGTTGGGGATGG.................................1912.002.00---------2.00-------------------------------
.....................................................................................................................................................................................................................................CATCTCGGCATAAGACTG...1812.002.00------1.00--------------------1.00-------------
.........................................................................................................................................................................................CTCTTGCTAATGAAGGTA...............................................1812.002.00-----------1.00----------1.00------------------
......................................................................................................GAAAGAAGGCTGATCGGG..................................................................................................................................1832.002.00-0.67-0.33---------------------------------0.330.330.33-
.........................................................................................................AGAAGGCTGATCGGGGGTT..............................................................................................................................1911.001.00--------1.00--------------------------------
..................................................................................................................................................................................................ATGAAGGTACTGGTTGGGGATGG.................................2311.001.00--1.00--------------------------------------
.......................................................................................................AAAGAAGGCTGATCGGGGG................................................................................................................................1911.001.00-1.00---------------------------------------
.................................................................................ACACGCAGTTACTCAGAATCAG...................................................................................................................................................2211.001.00-----------------1.00-----------------------
..........................................................................................TACTCAGAATCAGAAAGAAGGCT.........................................................................................................................................2311.001.00--------1.00--------------------------------
............................................................................................................AGGCTGATCGGGGGTTAG............................................................................................................................1811.001.00----------1.00------------------------------
...........................................................................................................AAGGCTGATCGGGGGTTAGATCTC.......................................................................................................................2411.001.00------1.00----------------------------------
.................................................................................................................................................................................................................GGGGATGGGTCGAGCTTT.......................1811.001.00--------------------1.00--------------------
..................................................................................................ATCAGAAAGAAGGCTGATCGG...................................................................................................................................2111.001.00-------------------------1.00---------------
.....................................................................................................AGAAAGAAGGCTGATCGGGGGTTAGA...........................................................................................................................2611.001.00-----1.00-----------------------------------
....................................................................................................................................................................................................GAAGGTACTGGTTGGGGATGG.................................2111.001.00-----1.00-----------------------------------
..................................................................................................................................................................................................ATGAAGGTACTGGTTGGG......................................1811.001.00-------------1.00---------------------------
........................................................................................................................................................................................................GTACTGGTTGGGGATGGG................................1821.001.00---0.50-------------------------------0.50-----
...................................................................................................TCAGAAAGAAGGCTGATCG....................................................................................................................................1911.001.00---1.00-------------------------------------
.............................................................................................TCAGAATCAGAAAGAAGG...........................................................................................................................................1811.001.00----------1.00------------------------------
....................................................................................................CAGAAAGAAGGCTGATCGGG..................................................................................................................................2011.001.00--------------1.00--------------------------
................................................................................................................................................................................................................TGGGGATGGGTCGAGCTTT.......................1911.001.00--1.00--------------------------------------
................................................................ATCAGTCTGCAGGTGTCA........................................................................................................................................................................1811.001.00-1.00---------------------------------------
.......................................................................................................AAAGAAGGCTGATCGGGG.................................................................................................................................1811.001.00-1.00---------------------------------------
.....................................................................................................................................................................................................................ATGGGTCGAGCTTTCCCA...................1811.001.00-1.00---------------------------------------
..........................................................................................................................................................................................................ACTGGTTGGGGATGGGACCT............................201.000.00------------------------1.00----------------
....................................................................................................................................................................................................................................CCATCTCGGCATAAGACT....1811.001.00-------------------------------1.00---------
......................................................................................................................................................................................................AGGTACTGGTTGGGGATGGG................................2011.001.00-------1.00---------------------------------
................................................................................................GAATCAGAAAGAAGGCTGATC.....................................................................................................................................2111.001.00-----------------------1.00-----------------
.................................................................................................AATCAGAAAGAAGGCTGGT......................................................................................................................................191.000.00----------------------------------1.00------
..............................ACCATGCTTTTTTTTC............................................................................................................................................................................................................1680.120.12----------------------------------------0.12

Antisense strand
TTAACATAAACAGAGCAGTAAATCTGGGGCACCATGCTTTTTTTTCAAAGTTGTTAAGAATTATATCAGTCTGCAGGTGTCACACGCAGTTACTCAGAATCAGAAAGAAGGCTGATCGGGGGTTAGATCTCCATCTATCTATCTTTTTGCAACCAACCACGTCCAGGCTGTTTATTTAATACTTCCTCTTGCTAATGAAGGTACTGGTTGGGGATGGGTCGAGCTTTCCCATCTCGGCATAAGACTGCAA
......................................................................((((..(((...)))))))..((((...(((((........)))))...))))...............................................................................................................................
..................................................51......................................................................123.............................................................................................................................
SizePerfect hitTotal NormPerfect NormSRR189784SRR033728(GSM497073)
MALT (MALT413). (B cell)
SRR039615(GSM531978)
Severe Chronic Hepatitis B Liver Tissue. (liver)
SRR039622(GSM531985)
HCV(+) Adjacent Tissue Sample. (liver)
SRR387909(GSM843861)
specific-host: Homo sapienshost cell line: Su. (cell line)
SRR060984(GSM569188)
Human plasma cell [09-001]. (cell line)
SRR033716(GSM497061)
Mentle Cell Lymphoma (MCL114). (B cell)
SRR033727(GSM497072)
HIV-positive DL (HIV412). (B cell)
SRR191615(GSM715725)
94genomic small RNA (size selected RNA from t. (breast)
SRR039623(GSM531986)
HCV(+) HCC Tissue Sample. (liver)
SRR040015(GSM532900)
G623T. (cervix)
SRR191410(GSM715520)
20genomic small RNA (size selected RNA from t. (breast)
SRR033712(GSM497057)
Burkitt Lymphoma (BL510). (B cell)
SRR191614(GSM715724)
92genomic small RNA (size selected RNA from t. (breast)
SRR033718(GSM497063)
Multiple Myeloma (U266). (B cell)
SRR060983(GSM569187)
Human pre-germinal center B cell [09-001]. (cell line)
SRR040010(GSM532895)
G529N. (cervix)
SRR033717(GSM497062)
Mentle Cell Lymphoma (MCL112). (B cell)
SRR033710(GSM497055)
GCB DLBCL (GCB385). (B cell)
SRR191556(GSM715666)
45genomic small RNA (size selected RNA from t. (breast)
SRR191606(GSM715716)
84genomic small RNA (size selected RNA from t. (breast)
SRR040036(GSM532921)
G243N. (cervix)
SRR191565(GSM715675)
92genomic small RNA (size selected RNA from t. (breast)
SRR191589(GSM715699)
69genomic small RNA (size selected RNA from t. (breast)
SRR037937(GSM510475)
293cand2. (cell line)
SRR191631(GSM715741)
75genomic small RNA (size selected RNA from t. (breast)
SRR189785SRR033721(GSM497066)
Ly3 cell line (Ly3). (B cell)
SRR189779(GSM714639)
cell line: HEK293clip variant: PAR-CLIPenzyma. (cell line)
SRR330902(SRX091740)
tissue: skin psoriatic uninvolveddisease stat. (skin)
SRR060986(GSM569190)
Human memory B cell [09-001]. (cell line)
SRR330866(SRX091704)
tissue: skin psoriatic involveddisease state:. (skin)
SRR191550(GSM715660)
27genomic small RNA (size selected RNA from t. (breast)
SRR033711(GSM497056)
GCB DLBCL (GCB110). (B cell)
SRR444044(SRX128892)
Sample 5cDNABarcode: AF-PP-340: ACG CTC TTC C. (skin)
SRR039614(GSM531977)
HBV-infected Liver Tissue. (liver)
SRR342894(SRX096790)
small RNA seq of Right atrial tissue. (heart)
SRR039618(GSM531981)
HBV(+) Side Tissue Sample 1. (liver)
SRR033730(GSM497075)
Lymphoblastic (ALL411). (B cell)
SRR033729(GSM497074)
splenic MZL (Splenic414). (B cell)
SRR189780(GSM714640)
cell line: HEK293clip variant: PAR-CLIPenzyma. (cell line)
...............................................................................................................................................................................................................................CTTTCCCATCTCGGCGGCT........ 191.000.00---------------------1.00-------------------
.....................................................................................................................................................CAACCAACCACGTCCTCT................................................................................... 181.000.00----------------1.00------------------------
..........................................................GTGACACCTGCAGACTGATATAATT....................................................................................................................................................................... 2511.001.00------------------------------1.00----------
.........................................................................AACTGCGTGTGACACCTG............................................................................................................................................................... 1811.001.00---------------------------------1.00-------
....................................................................................TCTGATTCTGAGTAACTGCG.................................................................................................................................................. 2011.001.00------------------1.00----------------------
..................................................................................TTTCTGATTCTGAGTAACTGCGTG................................................................................................................................................ 2411.001.00---------------1.00-------------------------
.....................................................................................TCTGATTCTGAGTAACTGC.................................................................................................................................................. 1911.001.00-------1.00---------------------------------
........................................................AGAATTATATCAGTCTGG................................................................................................................................................................................ 181.000.00-----------------------------1.00-----------
............................................................................................................AGGCTGATCGGGGGTTGGCC.......................................................................................................................... 201.000.00----------------------------1.00------------