ID: uc002hnk.2_intron_46_0_chr17_35627753_r.3p
GENE: (8)
chr17:35627703-35627952-


(4)
BREAST
(9)
CELL-LINE
(1)
HEART
(1)
LIVER
(4)
OTHER
(3)
SKIN

Sense strand
GGCAATTTCTTTTGGTTCAACCTAATACTACAAATATTGTTCTACTATTTATTTTTTCATAGTGTATCTTGAAGATCTTTCTATTTTATTGTATTTAGAATTACTAAATGACTGCATTCTTAAAGGGAGAAAAATGCCAGTTTTCTCCTTCCCTGGTAATAACACTGTTTCTTCTATTTTTTTTTTCTTTCTTTTTGAAGGCAGCTGAGGAAGTTGGATATCCAGTAATGATCAAGGCCTCAGAGGGAGG
.......................................................................................................................................(((((............))))).......((((..((((......................))))))))..............................................
.......................................................................................................................................136...................................................................206..........................................
SizePerfect hitTotal NormPerfect NormSRR189780(GSM714640)
cell line: HEK293clip variant: PAR-CLIPenzyma. (cell line)
SRR189779(GSM714639)
cell line: HEK293clip variant: PAR-CLIPenzyma. (cell line)
SRR189781(GSM714641)
cell line: HEK293clip variant: PAR-CLIPenzyma. (cell line)
SRR189778(GSM714638)
cell line: HEK293clip variant: PAR-CLIPenzyma. (cell line)
SRR189777(GSM714637)
cell line: HEK293clip variant: PAR-CLIPenzyma. (cell line)
SRR189776(GSM714636)
cell line: HEK293clip variant: CLIPenzymatic . (cell line)
SRR189784SRR189782SRR189775(GSM714635)
cell line: HEK293clip variant: CLIPenzymatic . (cell line)
SRR330913(SRX091751)
tissue: normal skindisease state: normal. (skin)
SRR189787SRR191588(GSM715698)
52genomic small RNA (size selected RNA from t. (breast)
SRR037937(GSM510475)
293cand2. (cell line)
SRR039617(GSM531980)
HBV(+) Adjacent Tissue Sample 1. (liver)
SRR189785TAX577739(Rovira)
total RNA. (breast)
SRR191474(GSM715584)
16genomic small RNA (size selected RNA from t. (breast)
SRR060168(GSM565978)
5-8F_nucleus. (cell line)
TAX577744(Rovira)
total RNA. (breast)
SRR342897(SRX096793)
small RNA seq of Left atrial tissue. (heart)
SRR330865(SRX091703)
tissue: skin psoriatic involveddisease state:. (skin)
SRR330905(SRX091743)
tissue: normal skindisease state: normal. (skin)
....................................................................................................................................................................................TTTTTTCTTTCTTTTTGAAGCG................................................223.000.00-3.00--------------------
................................................................................................................................................................................TTTTTTTTTTCTTTCTTTTTGCCC..................................................243.000.001.002.00--------------------
...............................................................................................................................................................................ATTTTTTTTTTCTTTCTTTTTGAGTTG................................................272.000.002.00---------------------
...............................................................................................................................................................................ATTTTTTTTTTCTTTCTTTTTGAGACC................................................272.000.002.00---------------------
..............................................................................................................................................................................TATTTTTTTTTTCTTTCTTTTTGCG...................................................252.000.00-2.00--------------------
..........................................................................................................................................................................CTTCTATTTTTTTTTTCTTTCTTTTTG.....................................................2712.002.00---2.00------------------
...............................................................................................................................................................................ATTTTTTTTTTCTTTCTTTTTAA....................................................231.000.00--1.00-------------------
........................................................................................................................................................................TTCTTCTATTTTTTTTTTCTTTCTTTTTG.....................................................2911.001.00-----1.00----------------
..............................................................................................................................................................................TATTTTTTTTTTCTTTCTCTAG......................................................221.000.00--------------1.00-------
.......................................................................................................................................................................TTTCTTCTATTTTTTTTTACAG.............................................................221.000.00---1.00------------------
............................................................................................................................................TTTTCTCCTTCCCTGGGCAG..........................................................................................201.000.00------1.00---------------
...........................................ACTATTTATTTTTTCAAG.............................................................................................................................................................................................181.000.00-----1.00----------------
................................................................................................................................................................................TTTTTTTTTTCTTTCTTTTTGGTA..................................................241.000.00-1.00--------------------
.........................................................................................................................................................................TCTTCTATTTTTTTTTTCTTTTTA.........................................................241.000.00-----1.00----------------
................................................................................................................................................................................TTTTTTTTTTCTTTCTTTTAATC...................................................231.000.00-1.00--------------------
...............................................................................................................................................................................ATTTTTTTTTTCTTTCTTAATG.....................................................221.000.00-1.00--------------------
................................................................................................................................................................................TTTTTTTTTTCTTTCTTTTTGGCCT.................................................251.000.00-1.00--------------------
...............................................................................................................................................................................ATTTTTTTTTTCTTTCTTTTTGC....................................................231.000.001.00---------------------
.......................................TTCTACTATTTATTTTTTCATA.............................................................................................................................................................................................2211.001.00--1.00-------------------
..........TTTGGTTCAACCTAATTT..............................................................................................................................................................................................................................181.000.00------1.00---------------
...............................................................................................................................................................................ATTTTTTTTTTCTTTCTTTTTGGCT..................................................251.000.001.00---------------------
..................................................................................................................................................................................TTTTTTTTCTTTCTTTTTGGGT..................................................221.000.001.00---------------------
.............................................................................................................................................................................................................TGAGGAAGTTGGATATATAT.........................201.000.00------------------1.00---
................................................................................................................................................................................TTTTTTTTTTCTTTCTTTTTGGCAG.................................................251.000.001.00---------------------
..........................................................................................................................................................................CTTCTATTTTTTTTTTCTCAAT..........................................................221.000.00--1.00-------------------
..................................................................................................................................................................................TTTTTTTTCTTTCTTTTTGAGTT.................................................231.000.00-1.00--------------------
..................................................................................................................................................................................TTTTTTTTCTTTCTTTTTGGTA..................................................221.000.001.00---------------------
...............................................................................................................................................................................ATTTTTTTTTTCTTTCTTTTGGGG...................................................241.000.001.00---------------------
..........................................................................................................................................................................CTTCTATTTTTTTTTTCTTTCTTTTGAG....................................................281.000.001.00---------------------
..................................................................................................................................................................................TTTTTTTTCTTTCTTTTTACC...................................................211.000.001.00---------------------
.................................................................................................................................................................................TTTTTTTTTCTTTCTTTTTGGGTT.................................................241.000.00-1.00--------------------
.............................................................................................................................................................................................................TGAGGAAGTTGGATATTT...........................181.000.00----------1.00-----------
...............................................................................................................................................................................ATTTTTTTTTTCTTTCTTTTTGGTG..................................................251.000.001.00---------------------
......................................................................................................................................................................................................AGGCAGCTGAGGAAGTTGG.................................1911.001.00-------------1.00--------
...............................................................................................................................................................................ATTTTTTTTTTCTTTCTTTTTGGCC..................................................251.000.001.00---------------------
...................................................................................................................................................................................TTTTTTTCTTTCTTTTTGGCTA.................................................221.000.001.00---------------------
.................................................................................................................................................................................TTTTTTTTTCTTTCTTTTTGGCC..................................................231.000.00-1.00--------------------
...........................................ACTATTTATTTTTTCCTG.............................................................................................................................................................................................181.000.00---1.00------------------
......................................................................................................................................................................................................AGGCAGCTGAGGAAGTTGGATA..............................2211.001.00-----------------1.00----
..............................................................................................................................................................................................................GAGGAAGTTGGATATCCAGTAATG....................2411.001.00-----------1.00----------
...............................................................................................................................................................................ATTTTTTTTTTCTTTCTTTTTGATTGG................................................271.000.00--1.00-------------------
.................................................................................................................................................................................TTTTTTTTTCTTTCTTTTTGAGC..................................................231.000.00-1.00--------------------
..............................................................................................................................................................................TATTTTTTTTTTCTTTCTATTC......................................................221.000.00--1.00-------------------
................................................................................................................................................................................TTTTTTTTTTCTTTCTTTTTAACT..................................................241.000.001.00---------------------
...............................................................................................................................................................................ATTTTTTTTTTCTTTCTTTACAG....................................................231.000.00----1.00-----------------
...............................................................................................................................................................................................................................AGTAATGATCAAGGCCTCAGAGGGAG.2611.001.00---------1.00------------
...............................................................................................................................................................................ATTTTTTTTTTCTTTCTTTGCC.....................................................221.000.001.00---------------------
................................................................................................................................................................................TTTTTTTTTTCTTTCTTTTTGACGG.................................................251.000.001.00---------------------
..........................................................................................................................................................................CTTCTATTTTTTTTTTCTCA............................................................201.000.00--1.00-------------------
.......................................................................................................................................................................TTTCTTCTATTTTTTTTTTCTTTCTTTTTG.....................................................3011.001.00--------1.00-------------
................................................................................................................................................................................TTTTTTTTTTCTTTCTTTTTGTTG..................................................241.000.001.00---------------------
...............................................TTTATTTTTTCATAGTCTTC.......................................................................................................................................................................................201.000.00-------1.00--------------
...............................................................................................................................................................................ATTTTTTTTTTCTTTCTTTTGGCC...................................................241.000.001.00---------------------
.................................................................................................................................................................................TTTTTTTTTCTTTCTTTTTGGCTG.................................................241.000.001.00---------------------
................................................................................................................................................................................TTTTTTTTTTCTTTCTTTTAAAG...................................................231.000.00----1.00-----------------
..................................................................................................................................................................................................................AAGTTGGATATCCAGTAATG....................2011.001.00----------------1.00-----
................................................................................................................................................................................TTTTTTTTTTCTTTCTTTTTGGCC..................................................241.000.00-1.00--------------------
............................................................................................................................................................................TCTATTTTTTTTTTCTTTCTTTTTAAAG..................................................281.000.00--1.00-------------------
..............................................................................................................................................................................TATTTTTTTTTTCTTTCCTG........................................................201.000.00----1.00-----------------
...................................................................................................................................................................................TTTTTTTCTTTCTTTTTGGGG..................................................211.000.00----1.00-----------------
.............................................................................................................................................................................................................TGAGGAAGTTGGATATATA..........................191.000.00-------1.00--------------
..............................................................................................................................................................................TATTTTTTTTTTCTTTCCTAG.......................................................211.000.00----1.00-----------------
.....................................................................................................................................................................................TTTTTCTTTCTTTTTGAAGCGG...............................................221.000.00-1.00--------------------
................................................................................................................................................................................TTTTTTTTTTCTTTCTTTTATTT...................................................231.000.00---1.00------------------
.............................................................................................................................................................................................................TGAGGAAGTTGGATATGTGG.........................201.000.00---------------1.00------
...................................................................................................................................................................................TTTTTTTCTTTCTTTTTGGATG.................................................221.000.001.00---------------------
..............................................................................................................................................................................TATTTTTTTTTTCTTTCGGC........................................................201.000.001.00---------------------
................................................................................................................................................................................................................................GTAATGATCAAGGCCT..........1620.500.50--------------------0.50-
.........................................................................................................................................................................TCTTCTATTTTTTTTTTCTT.............................................................2080.120.120.12---------------------
...........................................................................................................................................................................................................GCTGAGGAAGTTGGAT...............................1680.120.12---------------------0.12

Antisense strand
GGCAATTTCTTTTGGTTCAACCTAATACTACAAATATTGTTCTACTATTTATTTTTTCATAGTGTATCTTGAAGATCTTTCTATTTTATTGTATTTAGAATTACTAAATGACTGCATTCTTAAAGGGAGAAAAATGCCAGTTTTCTCCTTCCCTGGTAATAACACTGTTTCTTCTATTTTTTTTTTCTTTCTTTTTGAAGGCAGCTGAGGAAGTTGGATATCCAGTAATGATCAAGGCCTCAGAGGGAGG
.......................................................................................................................................(((((............))))).......((((..((((......................))))))))..............................................
.......................................................................................................................................136...................................................................206..........................................
SizePerfect hitTotal NormPerfect NormSRR189780(GSM714640)
cell line: HEK293clip variant: PAR-CLIPenzyma. (cell line)
SRR189779(GSM714639)
cell line: HEK293clip variant: PAR-CLIPenzyma. (cell line)
SRR189781(GSM714641)
cell line: HEK293clip variant: PAR-CLIPenzyma. (cell line)
SRR189778(GSM714638)
cell line: HEK293clip variant: PAR-CLIPenzyma. (cell line)
SRR189777(GSM714637)
cell line: HEK293clip variant: PAR-CLIPenzyma. (cell line)
SRR189776(GSM714636)
cell line: HEK293clip variant: CLIPenzymatic . (cell line)
SRR189784SRR189782SRR189775(GSM714635)
cell line: HEK293clip variant: CLIPenzymatic . (cell line)
SRR330913(SRX091751)
tissue: normal skindisease state: normal. (skin)
SRR189787SRR191588(GSM715698)
52genomic small RNA (size selected RNA from t. (breast)
SRR037937(GSM510475)
293cand2. (cell line)
SRR039617(GSM531980)
HBV(+) Adjacent Tissue Sample 1. (liver)
SRR189785TAX577739(Rovira)
total RNA. (breast)
SRR191474(GSM715584)
16genomic small RNA (size selected RNA from t. (breast)
SRR060168(GSM565978)
5-8F_nucleus. (cell line)
TAX577744(Rovira)
total RNA. (breast)
SRR342897(SRX096793)
small RNA seq of Left atrial tissue. (heart)
SRR330865(SRX091703)
tissue: skin psoriatic involveddisease state:. (skin)
SRR330905(SRX091743)
tissue: normal skindisease state: normal. (skin)
......................................GTTCTACTATTTATTTCTG................................................................................................................................................................................................. 191.000.00-------------------1.00--
...............................................................................TCTATTTTATTGTATTTTT........................................................................................................................................................ 191.000.00------------1.00---------