ID: uc002hky.2_intron_6_0_chr17_34497962_r.3p
GENE: TBC1D3B(7)
chr17:34497912-34498161-


(3)
CELL-LINE
(1)
CERVIX
(2)
HEART
(1)
HELA
(1)
OTHER
(4)
SKIN
(1)
TESTES

Sense strand
GTACAACTGGGCTATTTGCATGTCACAGATGTGGATTTTACTGAAACATTTCTTCAAGAGTCTCAGGCCCTGAAGAGCTCACTGCTTATCTGGTGAAACATCTGAACCTGAAATGGGATTTGCTGTTAGGCTTTGTAGACAAAGTGAAATTAACAACATCTGCACAAAACAAACCAAAGCCCCCTTTCTCTGTTTCCTAGGCAGCGGGAACTACTCCACATCCTCCTGGCATATGAGGAGTATAACCCGG
.................................................................((((...((.((((((((........)))))..........(((.....)))....))).)).))))......................................................................................................................
.................................................................66...................................................................135.................................................................................................................
SizePerfect hitTotal NormPerfect NormSRR553576(SRX182782)
source: Testis. (testes)
SRR342899(SRX096795)
small RNA seq of Left atrial tissue. (heart)
SRR189784SRR330863(SRX091701)
tissue: skin psoriatic involveddisease state:. (skin)
SRR330904(SRX091742)
tissue: normal skindisease state: normal. (skin)
SRR189780(GSM714640)
cell line: HEK293clip variant: PAR-CLIPenzyma. (cell line)
SRR207110(GSM721072)
Nuclear RNA. (cell line)
SRR037942(GSM510480)
293DroshaTN_cand5. (cell line)
DRR001486(DRX001040)
"Hela long cytoplasmic cell fraction, LNA(+)". (hela)
SRR330877(SRX091715)
tissue: skin psoriatic involveddisease state:. (skin)
SRR553573(SRX182779)
source: Cerebellum. (Cerebellum)
SRR330901(SRX091739)
tissue: skin psoriatic uninvolveddisease stat. (skin)
SRR342897(SRX096793)
small RNA seq of Left atrial tissue. (heart)
SRR040011(GSM532896)
G529T. (cervix)
................................................................................................................ATGGGATTTGCTGTTAGGC.......................................................................................................................19821.6221.6221.50-------0.12-----
............................................................................................................TGAAATGGGATTTGCTGTTAGGCTTTGTAGACAA............................................................................................................3486.006.006.00-------------
.........................................................................................CTGGTGAAACATCTGAACC..............................................................................................................................................1963.673.673.67-------------
..............................................................................................................................TAGGCTTTGTAGACAA............................................................................................................1693.673.673.67-------------
............................................................................................................TGAAATGGGATTTGCTGTTAGGCTTTGTAG................................................................................................................3081.751.751.75-------------
............................................................................................................TGAAATGGGATTTGCTGTTAGGC.......................................................................................................................2381.381.381.38-------------
......................................................................TGAAGAGCTCACTGCAC...................................................................................................................................................................171.000.00--1.00-----------
.................GCATGTCACAGATGTGCA.......................................................................................................................................................................................................................181.000.001.00-------------
............................................................................................................TGAAATGGGATTTGCTGTTAGG........................................................................................................................2281.001.001.00-------------
..........GCTATTTGCATGTCACAGATGTGGAAAA....................................................................................................................................................................................................................281.000.001.00-------------
......................................................................................................................................................TAACAACATCTGCACAAAACAAAAGC..........................................................................261.000.001.00-------------
..........................................................................................................CCTGAAATGGGATTTGCTGTTAAAAA......................................................................................................................261.000.00---1.00----------
.........................CAGATGTGGATTTTACTGAAAAAA.........................................................................................................................................................................................................241.000.001.00-------------
........................................................AGAGTCTCAGGCCCTGAAGAGCTCACCGC.....................................................................................................................................................................291.000.00-----1.00--------
................................................................................................................ATGGGATTTGCTGTTAAGC.......................................................................................................................191.000.001.00-------------
.............................................................................................................GAAATGGGATTTGCTGTTACGC.......................................................................................................................221.000.001.00-------------
...................................................................................................................................TTTGTAGACAAAGTGAAAAA...................................................................................................201.000.001.00-------------
................................................................AGGCCCTGAAGAGCTGCTT.......................................................................................................................................................................191.000.00----1.00---------
.........................CAGATGTGGATTTTACTGAAACAA.........................................................................................................................................................................................................241.000.001.00-------------
.................GCATGTCACAGATGTGGAAA.....................................................................................................................................................................................................................201.000.001.00-------------
...................................................................................................................................TTTGTAGACAAAGTGAAATTA..................................................................................................2180.880.880.88-------------
............................................................................................................TGAAATGGGATTTGCTGTTAGGCTTTGTAGA...............................................................................................................3180.750.750.75-------------
.................................................................................................................TGGGATTTGCTGTTAGGCT......................................................................................................................1980.750.750.75-------------
...........................................................................................................................TGTTAGGCTTTGTAGACAA............................................................................................................1980.620.620.50-------0.12-----
................................................................................................................ATGGGATTTGCTGTTAGG........................................................................................................................1880.620.620.62-------------
............................................................................................................TGAAATGGGATTTGCTGTTAGGCTTTGTAGAC..............................................................................................................3280.620.620.62-------------
...............................................................................................................................AGGCTTTGTAGACAAAG..........................................................................................................1790.560.560.11-----0.44-------
............................................................................................................TGAAATGGGATTTGCTGTTAGGCT......................................................................................................................2480.500.500.50-------------
...................................................................................................................................TTTGTAGACAAAGTGAAATT...................................................................................................2090.440.440.44-------------
...............................................ATTTCTTCAAGAGTCTCAGGCCCTGAAGAGC............................................................................................................................................................................3180.380.380.38-------------
.............................................................................................................................TTAGGCTTTGTAGACAA............................................................................................................1780.380.380.38-------------
..............................................................................................................AAATGGGATTTGCTGTTAG.........................................................................................................................1980.380.380.38-------------
......................................................................................................TGAACCTGAAATGGGATTTGCTGTTAGGC.......................................................................................................................2980.380.380.38-------------
.......................................................................................................................TTGCTGTTAGGCTTTGTAG................................................................................................................1980.380.380.38-------------
..............................................................................................................................TAGGCTTTGTAGACAAAGT.........................................................................................................1980.380.380.38-------------
.......................................................................................................................................TAGACAAAGTGAAATTAAC................................................................................................1980.380.380.38-------------
.............................................................................................................................................................................................................................CCTCCTGGCATATGAGGAGTATAACC...2660.330.33-------0.33------
............................................................................................GTGAAACATCTGAACC..............................................................................................................................................1660.330.330.33-------------
...................................................................................................................................................................................................CCTAGGCAGCGGGAACTAC....................................1980.250.25---------0.25----
............................................................................................................TGAAATGGGATTTGCTGTTAGGCTTTGTA.................................................................................................................2980.250.250.25-------------
................................................................................................................ATGGGATTTGCTGTTAGGCTTTGTAGACAA............................................................................................................3080.250.250.25-------------
......................................TACTGAAACATTTCTTCAAGAGTC............................................................................................................................................................................................2480.250.250.25-------------
.................................................................................................................TGGGATTTGCTGTTAGGC.......................................................................................................................1880.250.250.25-------------
................................................................................................................ATGGGATTTGCTGTTAG.........................................................................................................................1780.250.250.25-------------
.........................................................................................................................GCTGTTAGGCTTTGTAGACAAAGTGAAATTAAC................................................................................................3380.250.250.25-------------
....................................................................................................TCTGAACCTGAAATGGGATTTGCTGTTAGGC.......................................................................................................................3180.250.250.25-------------
..................................................................................................................GGGATTTGCTGTTAGGC.......................................................................................................................1790.220.220.22-------------
.............................................................................................TGAAACATCTGAACCTGAAATGGGATT..................................................................................................................................2760.170.170.17-------------
..................................................................................................................................................................................................TCCTAGGCAGCGGGAACTACTCCA................................2460.170.17------------0.17-
.....................................................................................................................................................................................................................CTCCACATCCTCCTGGCATATGAGGAGT.........2860.170.170.17-------------
..............................................................................TCACTGCTTATCTGGTGAAACATCTGAACC..............................................................................................................................................3060.170.170.17-------------
...............................................................................................................................................................................................................................TCCTGGCATATGAGGAGTAT.......2060.170.17----------0.17---
......................................................................................TATCTGGTGAAACATCTGAACC..............................................................................................................................................2260.170.170.17-------------
.......................................................................................ATCTGGTGAAACATCTGAACCTGAAATGGGA....................................................................................................................................3160.170.170.17-------------
..........................................................................................TGGTGAAACATCTGAACCTGAAATGGG.....................................................................................................................................2760.170.170.17-------------
...............................................................................................AAACATCTGAACCTGAAATGGGA....................................................................................................................................2360.170.170.17-------------
............................................................................................GTGAAACATCTGAACCTGAAATGGGATTTGC...............................................................................................................................3160.170.170.17-------------
.......................................................................................ATCTGGTGAAACATCTGAACCTG............................................................................................................................................2360.170.170.17-------------
................................................................................................................................................................................................................................CCTGGCATATGAGGAGTATAACC...2360.170.17-----------0.17--
........................................................................................TCTGGTGAAACATCTGAACCTGAAATGGGA....................................................................................................................................3060.170.170.17-------------
..............................................................................................................................................................TCTGCACAAAACAAACCAAAGC......................................................................2280.120.120.12-------------
......................................................................................................................TTTGCTGTTAGGCTTTGTAGACAAAGTGA.......................................................................................................2980.120.120.12-------------
...................................................................................................................................TTTGTAGACAAAGTGAAATTAACA...............................................................................................2480.120.120.12-------------
................................................................................................................ATGGGATTTGCTGTTAGGCTTTGTAGA...............................................................................................................2780.120.120.12-------------
..............................................................................................................................................................TCTGCACAAAACAAACCAAA........................................................................2080.120.120.12-------------
...................................................................................................................................TTTGTAGACAAAGTGAAATTAACAACATCTG........................................................................................3180.120.120.12-------------
..............................................CATTTCTTCAAGAGTCTCAGGC......................................................................................................................................................................................2280.120.120.12-------------
......................................................................................................................................GTAGACAAAGTGAAATTAACAAC.............................................................................................2380.120.120.12-------------
............................................................................................................TGAAATGGGATTTGCTGTTAGGCTTTGTAGAAGT............................................................................................................3480.120.750.12-------------
...............................................ATTTCTTCAAGAGTCTCAGGC......................................................................................................................................................................................2180.120.120.12-------------
..................................................................................................................GGGATTTGCTGTTAGGCTTTG...................................................................................................................2180.120.120.12-------------
............................................................................................................TGAAATGGGATTTGCTGTTAGGCTTTGTAGACA.............................................................................................................3380.120.120.12-------------
..............................................................................................................................................................TCTGCACAAAACAAACCAAAGCC.....................................................................2380.120.120.12-------------
..............................................................................................................................................................TCTGCACAAAACAAACCA..........................................................................1880.120.120.12-------------
....................................................................................................................................TTGTAGACAAAGTGAAATTAACAACATCTG........................................................................................3080.120.120.12-------------
............................................................................................................................GTTAGGCTTTGTAGACAAA...........................................................................................................1980.120.120.12-------------
...........................................................................................................CTGAAATGGGATTTGCTGTTAGGC.......................................................................................................................2480.120.120.12-------------
.........................................................................................................................GCTGTTAGGCTTTGTAGACAAAGTGAAATTAACA...............................................................................................3480.120.120.12-------------
.......................................................................................................................TTGCTGTTAGGCTTTGTAGACAA............................................................................................................2380.120.120.12-------------
.................................................................................................................TGGGATTTGCTGTTAGGCTTTGTAGACAA............................................................................................................2980.120.120.12-------------
............................................................................................................TGAAATGGGATTTGCTGTTAGGCTTT....................................................................................................................2680.120.120.12-------------
................................................................................................................ATGGGATTTGCTGTTAGGCTTTGTAGACAAA...........................................................................................................3180.120.120.12-------------
..........................................................................................................................CTGTTAGGCTTTGTAGACAA............................................................................................................2080.120.120.12-------------
.............................................................................................................................TTAGGCTTTGTAGACAAAGTGAAATTAACAAC.............................................................................................3280.120.120.12-------------
......................................................................................................................................GTAGACAAAGTGAAATTAACAACATCTG........................................................................................2880.120.120.12-------------
..............................................................................................................................TAGGCTTTGTAGACAAA...........................................................................................................1780.120.120.12-------------
................................................................................................................ATGGGATTTGCTGTTAGGCTTTGTAGACAAAGT.........................................................................................................3380.120.120.12-------------
.......................................................................................................................TTGCTGTTAGGCTTTGTAGACAAAGT.........................................................................................................2680.120.120.12-------------
..........................................................................................................................CTGTTAGGCTTTGTAGACAAAGTGAA......................................................................................................2680.120.120.12-------------
....................................................................................................TCTGAACCTGAAATGGGATTTGCTGT............................................................................................................................2680.120.120.12-------------
.................................................................................................................................................GAAATTAACAACATCTGCACAAA..................................................................................2380.120.120.12-------------
................................................................................................................ATGGGATTTGCTGTTAGGT.......................................................................................................................1980.120.620.12-------------
..............................................CATTTCTTCAAGAGTCTCAGGCC.....................................................................................................................................................................................2380.120.120.12-------------
..............................................................................................................................................AGTGAAATTAACAACATCTGCACAA...................................................................................2580.120.120.12-------------
...........................................................................................................................TGTTAGGCTTTGTAGACAAAGTGAAATTAAC................................................................................................3180.120.120.12-------------
...................................................................................................................GGATTTGCTGTTAGGCTTTGTAGACAAA...........................................................................................................2880.120.120.12-------------
..............................................CATTTCTTCAAGAGTCTCAGG.......................................................................................................................................................................................2180.120.120.12-------------
.........................................................................................................................GCTGTTAGGCTTTGTAGAC..............................................................................................................1980.120.120.12-------------
..............................................................................................................................................AGTGAAATTAACAACATCT.........................................................................................1980.120.120.12-------------
..................................................................................................................GGGATTTGCTGTTAGGCTT.....................................................................................................................1980.120.120.12-------------
............................................................................................................TGAAATGGGATTTGCTGTTA..........................................................................................................................2080.120.120.12-------------
.................................................................................................................TGGGATTTGCTGTTAGGCTTTGTAGACAAAG..........................................................................................................3180.120.120.12-------------
................................................................................................................ATGGGATTTGCTGTTAGGCTTTGTAGACAAAGTA........................................................................................................3480.120.120.12-------------
.................................................................................................................TGGGATTTGCTGTTAGG........................................................................................................................1780.120.120.12-------------
..............................................................................................................................................................TCTGCACAAAACAAACCAAAA.......................................................................2180.120.120.12-------------
...........................................................................................................CTGAAATGGGATTTGCTGTTAGG........................................................................................................................2380.120.120.12-------------
...............................................................CAGGCCCTGAAGAGCTCACTGCTT...................................................................................................................................................................2490.110.110.11-------------
....................................................................................................................................TTGTAGACAAAGTGAAATT...................................................................................................1990.110.110.11-------------
....................................................................................................................................TTGTAGACAAAGTGAAAT....................................................................................................1890.110.110.11-------------
........................................................................................................................................................................ACAAACCAAAGCCCCCTTTCTC............................................................2290.110.11-------------0.11

Antisense strand
GTACAACTGGGCTATTTGCATGTCACAGATGTGGATTTTACTGAAACATTTCTTCAAGAGTCTCAGGCCCTGAAGAGCTCACTGCTTATCTGGTGAAACATCTGAACCTGAAATGGGATTTGCTGTTAGGCTTTGTAGACAAAGTGAAATTAACAACATCTGCACAAAACAAACCAAAGCCCCCTTTCTCTGTTTCCTAGGCAGCGGGAACTACTCCACATCCTCCTGGCATATGAGGAGTATAACCCGG
.................................................................((((...((.((((((((........)))))..........(((.....)))....))).)).))))......................................................................................................................
.................................................................66...................................................................135.................................................................................................................
SizePerfect hitTotal NormPerfect NormSRR553576(SRX182782)
source: Testis. (testes)
SRR342899(SRX096795)
small RNA seq of Left atrial tissue. (heart)
SRR189784SRR330863(SRX091701)
tissue: skin psoriatic involveddisease state:. (skin)
SRR330904(SRX091742)
tissue: normal skindisease state: normal. (skin)
SRR189780(GSM714640)
cell line: HEK293clip variant: PAR-CLIPenzyma. (cell line)
SRR207110(GSM721072)
Nuclear RNA. (cell line)
SRR037942(GSM510480)
293DroshaTN_cand5. (cell line)
DRR001486(DRX001040)
"Hela long cytoplasmic cell fraction, LNA(+)". (hela)
SRR330877(SRX091715)
tissue: skin psoriatic involveddisease state:. (skin)
SRR553573(SRX182779)
source: Cerebellum. (Cerebellum)
SRR330901(SRX091739)
tissue: skin psoriatic uninvolveddisease stat. (skin)
SRR342897(SRX096793)
small RNA seq of Left atrial tissue. (heart)
SRR040011(GSM532896)
G529T. (cervix)
...................................................................................................................................................................................CCCCCTTTCTCTGTTTCCTAGGGC............................................... 242.000.002.00-------------
.........................CAGATGTGGATTTTACTGAAACATTTCTTCAA................................................................................................................................................................................................. 321.000.001.00-------------
..................................................TCTTCAAGAGTCTCACT....................................................................................................................................................................................... 171.000.00-1.00------------
..................................................................CAGATAAGCAGTGAGCTCTTCAGGGC.............................................................................................................................................................. 2690.330.330.33-------------
..............................................................................................................................................................................................................TATGCCAGGAGGATGTGGAGTAGTTCC................. 2760.170.170.17-------------
..........................................................................................................................................................................................................GAGGATGTGGAGTAGTTCCCGCT......................... 2360.170.170.17-------------
.............................................................................................................................................................................................................GCCAGGAGGATGTGGAGTAGTTCCC.................... 2560.170.170.17-------------
..............................................................................................................................................................................................ATGTGGAGTAGTTCCCGCTGCCTAGGAAACA............................. 3160.170.170.17-------------
............................................................................................................................................................................TAGGAAACAGAGAAAGGGGGCTTTGGT................................................... 2780.120.120.12-------------
...............................................TGAGACTCTTGAAGAAAT......................................................................................................................................................................................... 1880.120.120.12-------------
...............................................................................................................................................................................TAGGAAACAGAGAAAGGGGGCTTT................................................... 2480.120.120.12-------------
..................................................................AGATAAGCAGTGAGCTCTTCAGGGC............................................................................................................................................................... 2590.110.110.11-------------