uc002hgr.2_intron_14_0_chr17_30219814

CACCATGTTGGCCAGGCTGGTTTCAATCTCCTGACCTCAAGTGATCCGCCCGCTTCGGCTTCACAAAGTGGTGGGATTACAGGTGTGAGCCACCGCATCCAACCTGAAATTTGCTTGTTTTTAGCAAAATTAATTAATGCAAAGGTGTATTATATGTAAAGGTCAAATTTGGGCAGCTTACTACATTGCTTTTCTTGCAGGACGATGTTCAACTTTGGCTCTCCTATGTGGCTTTTTGTAAGAAGTGGGT
...................................................................((((((((....(((((..((((....)).))..))))).....((((((..(((.((.........(((((((....))))))).........)).)))..)))))).))))))))..(((.......)))...................................................
............................................................61.........................................................................................................................................200................................................

Size

Perfect hit

Total Norm

Perfect Norm

SRR189780(GSM714640)
cell line: HEK293clip variant: PAR-CLIPenzyma. (cell line)

SRR037940(GSM510478)
293cand5_rep2. (cell line)

SRR037939(GSM510477)
293cand5_rep1. (cell line)

SRR189779(GSM714639)
cell line: HEK293clip variant: PAR-CLIPenzyma. (cell line)

SRR029124(GSM416753)
HeLa. (hela)

SRR330865(SRX091703)
tissue: skin psoriatic involveddisease state:. (skin)

SRR189784

SRR029128(GSM416757)
H520. (cell line)

DRR000559(DRX000317)
"THP-1 whole cell RNA, no treatment". (cell line)

SRR207115(GSM721077)
XRN1&2 knockdown. (XRN1/XRN2 cell line)

SRR330868(SRX091706)
tissue: skin psoriatic involveddisease state:. (skin)

SRR330859(SRX091697)
tissue: skin psoriatic involveddisease state:. (skin)

SRR553572(SRX182778)
source: Frontal Cortex. (Frontal Cortex)

SRR039621(GSM531984)
HBV(+) HCC Tissue Sample 2. (liver)

TAX577588(Rovira)
total RNA. (breast)

SRR039625(GSM531988)
HBV(-) HCV(-) HCC Tissue Sample. (liver)

SRR191592(GSM715702)
59genomic small RNA (size selected RNA from t. (breast)

SRR029129(GSM416758)
SW480. (cell line)

DRR000556(DRX000314)
"THP-1 whole cell RNA, after 3 day treatment . (cell line)

GSM416733(GSM416733)
HEK293. (cell line)

SRR189782

SRR330911(SRX091749)
tissue: normal skindisease state: normal. (skin)

SRR033716(GSM497061)
Mentle Cell Lymphoma (MCL114). (B cell)

SRR037931(GSM510469)
293GFP. (cell line)

SRR330887(SRX091725)
tissue: skin psoriatic uninvolveddisease stat. (skin)

TAX577741(Rovira)
total RNA. (breast)

SRR038861(GSM458544)
MM466. (cell line)

SRR330871(SRX091709)
tissue: skin psoriatic involveddisease state:. (skin)

SRR040014(GSM532899)
G623N. (cervix)

SRR330861(SRX091699)
tissue: skin psoriatic involveddisease state:. (skin)

SRR330901(SRX091739)
tissue: skin psoriatic uninvolveddisease stat. (skin)

SRR107296(GSM677703)
18-30nt fraction of small RNA. (cell line)

TAX577738(Rovira)
total RNA. (breast)

TAX577743(Rovira)
total RNA. (breast)

SRR189781(GSM714641)
cell line: HEK293clip variant: PAR-CLIPenzyma. (cell line)

.................................................................................................................................................................................TTACTACATTGCTTTTCTTGCAGA.................................................

20.00

4.00

12.00

8.00

................................................................................................................................................................................CTTACTACATTGCTTTTCTTGCAG..................................................

10.00

2.00

1.00

2.00

1.00

........................................................................................................................................................................TTGGGCAGCTTACTACATTGCTTTTCTTGCAG..................................................

4.00

2.00

1.00

4.00

2.00

1.00

................................................................................................................................................................................CTTACTACATTGCTTTTCTTGCAGA.................................................

3.00

10.00

1.00

2.00

.......................................................................................................................................................................TTTGGGCAGCTTACTACATTGCTTTTCTTGCAG..................................................

2.00

1.00

........................................................................................................................................................................TTGGGCAGCTTACTACATTGCTTTTCTTGCAGA.................................................

2.00

4.00

2.00

...............................TGACCTCAAGTGATCCGCCATAA....................................................................................................................................................................................................

1.00

0.00

1.00

....ATGTTGGCCAGGCTGGTTCTA.................................................................................................................................................................................................................................

1.00

0.00

1.00

.................................................................................................................................................................................TTACTACATTGCTTTTCTTGCAT..................................................

1.00

0.00

1.00

......................................AAGTGATCCGCCCGCTTCGGCTAGG...........................................................................................................................................................................................

1.00

0.00

1.00

.............................................................................................................................................................................CAGCTTACTACATTGCTTTTCTTGCAT..................................................

1.00

0.00

1.00

.................................................................AAGTGGTGGGATTACAGGTGAAC..................................................................................................................................................................

1.00

0.00

1.00

................................................................................................................................................................................CTTACTACATTGCTTTTCTTG.....................................................

1.00

............................................................................................................................................................................................................................CTCCTATGTGGCTTTTTGTAAGAAGTG...

1.00

..............................................................................................................................AAATTAATTAATGCAAAAAA........................................................................................................

1.00

0.00

1.00

..................................................................AGTGGTGGGATTACAGGT......................................................................................................................................................................

1.00

...............................................................................................................................AATTAATTAATGCAAACTA........................................................................................................

1.00

0.00

1.00

...............................TGACCTCAAGTGATCCGCAAT......................................................................................................................................................................................................

1.00

0.00

1.00

................................................................AAAGTGGTGGGATTACAGGTGTGAGCAACC............................................................................................................................................................

1.00

0.00

1.00

..................................................................................................................................................................................TACTACATTGCTTTTCTTGCAG..................................................

1.00

..............................................................................................................................................................................................TTTCTTGCAGGACGATCA..........................................

1.00

0.00

1.00

...............................TGACCTCAAGTGATCCGCCCGCTTTAG................................................................................................................................................................................................

1.00

0.00

1.00

CACCATGTTGGCCAGGCTGGTTTCAATCTCCTGACCTCAAGTGATCCGCCCGCTTCGGCTTCACAAAGTGGTGGGATTACAGGTGTGAGCCACCGCATCCAACCTGAAATTTGCTTGTTTTTAGCAAAATTAATTAATGCAAAGGTGTATTATATGTAAAGGTCAAATTTGGGCAGCTTACTACATTGCTTTTCTTGCAGGACGATGTTCAACTTTGGCTCTCCTATGTGGCTTTTTGTAAGAAGTGGGT ...................................................................((((((((....(((((..((((....)).))..))))).....((((((..(((.((.........(((((((....))))))).........)).)))..)))))).))))))))..(((.......)))................................................... ............................................................61.........................................................................................................................................200................................................	Size	Perfect hit	Total Norm	Perfect Norm	SRR189780(GSM714640) cell line: HEK293clip variant: PAR-CLIPenzyma. (cell line)	SRR037940(GSM510478) 293cand5_rep2. (cell line)	SRR037939(GSM510477) 293cand5_rep1. (cell line)	SRR189779(GSM714639) cell line: HEK293clip variant: PAR-CLIPenzyma. (cell line)	SRR029124(GSM416753) HeLa. (hela)	SRR330865(SRX091703) tissue: skin psoriatic involveddisease state:. (skin)	SRR189784	SRR029128(GSM416757) H520. (cell line)	DRR000559(DRX000317) "THP-1 whole cell RNA, no treatment". (cell line)	SRR207115(GSM721077) XRN1&2 knockdown. (XRN1/XRN2 cell line)	SRR330868(SRX091706) tissue: skin psoriatic involveddisease state:. (skin)	SRR330859(SRX091697) tissue: skin psoriatic involveddisease state:. (skin)	SRR553572(SRX182778) source: Frontal Cortex. (Frontal Cortex)	SRR039621(GSM531984) HBV(+) HCC Tissue Sample 2. (liver)	TAX577588(Rovira) total RNA. (breast)	SRR039625(GSM531988) HBV(-) HCV(-) HCC Tissue Sample. (liver)	SRR191592(GSM715702) 59genomic small RNA (size selected RNA from t. (breast)	SRR029129(GSM416758) SW480. (cell line)	DRR000556(DRX000314) "THP-1 whole cell RNA, after 3 day treatment . (cell line)	GSM416733(GSM416733) HEK293. (cell line)	SRR189782	SRR330911(SRX091749) tissue: normal skindisease state: normal. (skin)	SRR033716(GSM497061) Mentle Cell Lymphoma (MCL114). (B cell)	SRR037931(GSM510469) 293GFP. (cell line)	SRR330887(SRX091725) tissue: skin psoriatic uninvolveddisease stat. (skin)	TAX577741(Rovira) total RNA. (breast)	SRR038861(GSM458544) MM466. (cell line)	SRR330871(SRX091709) tissue: skin psoriatic involveddisease state:. (skin)	SRR040014(GSM532899) G623N. (cervix)	SRR330861(SRX091699) tissue: skin psoriatic involveddisease state:. (skin)	SRR330901(SRX091739) tissue: skin psoriatic uninvolveddisease stat. (skin)	SRR107296(GSM677703) 18-30nt fraction of small RNA. (cell line)	TAX577738(Rovira) total RNA. (breast)	TAX577743(Rovira) total RNA. (breast)	SRR189781(GSM714641) cell line: HEK293clip variant: PAR-CLIPenzyma. (cell line)
......GTTGGCCAGGCTGGTTTGGTG...............................................................................................................................................................................................................................	21		2.00	0.00	1.00	-	-	1.00	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-
......GTTGGCCAGGCTGGTTTGGGG...............................................................................................................................................................................................................................	21		2.00	0.00	2.00	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-
...............................................................................CAGGTGTGAGCCACCGCATCCACGT..................................................................................................................................................	25		1.00	0.00	1.00	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-
......GTTGGCCAGGCTGGTTTCAGGTG.............................................................................................................................................................................................................................	23		1.00	0.00	1.00	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-
.............................................CCGCCCGCTTCGGCTTTCT..........................................................................................................................................................................................	19		1.00	0.00	-	-	-	1.00	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-
...........................CTCCTGACCTCAAGTGATCCGCCCCCCG...................................................................................................................................................................................................	28		1.00	0.00	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	1.00
...........................CTCCTGACCTCAAGTGATCCGCCCGCG....................................................................................................................................................................................................	27		1.00	0.00	1.00	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-
...........................CTCCTGACCTCAAGTGATCCGCCCGCTTCGTG...............................................................................................................................................................................................	32		1.00	0.00	-	-	-	1.00	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-
..................................................................................................................................................................................................................AACTTTGGCTCTCCTAAA......................	18		1.00	0.00	-	-	-	-	-	-	-	-	-	-	-	-	-	1.00	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-
..........................TCTCCTGACCTCAAGTGATCCGCCA.......................................................................................................................................................................................................	25		1.00	0.00	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	1.00	-	-	-	-	-	-	-	-	-	-	-	-
.......TTGGCCAGGCTGGTTTCAATCTCCTGCA.......................................................................................................................................................................................................................	28		1.00	0.00	-	-	-	1.00	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-
......GTTGGCCAGGCTGGTTTGGAG...............................................................................................................................................................................................................................	21		1.00	0.00	1.00	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-
......GTTGGCCAGGCTGGTTTGGC................................................................................................................................................................................................................................	20		1.00	0.00	1.00	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-
...........................CTCCTGACCTCAAGTGATCCGCCCGCTCTC.................................................................................................................................................................................................	30		1.00	0.00	1.00	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-
........................................GCCGAAGCGGGCGGATCAC...............................................................................................................................................................................................	19	0	1.00	1.00	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	1.00	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-
...........................CTCCTGACCTCAAGTGATCCGCCCGCTCTTG................................................................................................................................................................................................	31		1.00	0.00	-	-	-	1.00	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-
.......TTGGCCAGGCTGGTTTCAAGGCG............................................................................................................................................................................................................................	23		1.00	0.00	-	-	-	1.00	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-
...........................................................................................................................................................................................................................TCTTACAAAAAGCCACATAGGAGA.......	24	1	1.00	1.00	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	1.00	-	-	-	-
..............................................................................ACAGGTGTGAGCCACCGCATTCC.....................................................................................................................................................	23		1.00	0.00	1.00	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-
.................................................CCGCTTCGGCTTCACCCA.......................................................................................................................................................................................	18		1.00	0.00	-	-	-	-	-	-	1.00	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-
....................................................................................................................................................................................................TTGAACATCGTCCTGC......................................	16	2	0.50	0.50	-	-	-	-	-	-	-	-	-	-	-	-	0.50	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-