ID: uc002hfr.3_intron_0_0_chr17_29111462_r.5p
GENE: (7)
chr17:29112737-29112986-


(4)
BRAIN
(11)
CELL-LINE
(1)
HEART
(1)
HELA
(3)
LIVER
(3)
OTHER
(7)
SKIN
(1)
TESTES
(1)
UTERUS

Sense strand
TGGATATGACTCTCTGCAGCGGGATCAAGCTGTGTGCATTAGTACAAATGGTAAGAGATAAATAACTGTCATTCTCTTGGAAATATATTAATTATTTTAGTAATATGTGAATCTGTTCCAGTTCCATACATTTATAGTAGGAGATGAGAAAATTTAGGTATTTTTCTTTTTCTTTTTTTTTTTTTTTATTATGAAGTCTCACTCCATCACTCAGGCTGGAGTACAGTGGCATGATCGTAGCCCGCTGCAG
..................................................................................................................................((((((((((((((.(((((((...(((......)))......))))))).)))))))))))))).......................................................
................................................................................................................................129....................................................................200................................................
SizePerfect hitTotal NormPerfect NormSRR189776(GSM714636)
cell line: HEK293clip variant: CLIPenzymatic . (cell line)
SRR189775(GSM714635)
cell line: HEK293clip variant: CLIPenzymatic . (cell line)
SRR189778(GSM714638)
cell line: HEK293clip variant: PAR-CLIPenzyma. (cell line)
SRR189777(GSM714637)
cell line: HEK293clip variant: PAR-CLIPenzyma. (cell line)
SRR189779(GSM714639)
cell line: HEK293clip variant: PAR-CLIPenzyma. (cell line)
SRR189780(GSM714640)
cell line: HEK293clip variant: PAR-CLIPenzyma. (cell line)
SRR189781(GSM714641)
cell line: HEK293clip variant: PAR-CLIPenzyma. (cell line)
SRR039622(GSM531985)
HCV(+) Adjacent Tissue Sample. (liver)
SRR553576(SRX182782)
source: Testis. (testes)
DRR001488(DRX001042)
"Hela short nuclear cell fraction, LNA(+)". (hela)
SRR330912(SRX091750)
tissue: normal skindisease state: normal. (skin)
SRR037936(GSM510474)
293cand1. (cell line)
SRR039620(GSM531983)
HBV(+) Adjacent Tissue Sample 2. (liver)
SRR094130(GSM651906)
small RNA(18-35nt)small RNA deep sequencing o. (uterus)
SRR189787GSM450601(GSM450601)
miRNA sequencing raw reads from post-mortem s. (brain)
SRR330863(SRX091701)
tissue: skin psoriatic involveddisease state:. (skin)
SRR342901(SRX096797)
small RNA seq of Left atrial tissue. (heart)
SRR444049(SRX128897)
Sample 9cDNABarcode: AF-PP-334: ACG CTC TTC C. (skin)
SRR330904(SRX091742)
tissue: normal skindisease state: normal. (skin)
SRR189785SRR189786GSM450602(GSM450602)
miRNA sequencing raw reads from post-mortem s. (brain)
SRR330869(SRX091707)
tissue: skin psoriatic involveddisease state:. (skin)
GSM450599(GSM450599)
miRNA sequencing raw reads from post-mortem s. (brain)
GSM450605(GSM450605)
miRNA sequencing raw reads from post-mortem s. (brain)
SRR330886(SRX091724)
tissue: skin psoriatic uninvolveddisease stat. (skin)
SRR039623(GSM531986)
HCV(+) HCC Tissue Sample. (liver)
SRR060981(GSM569185)
Human centroblast [09-001]. (cell line)
SRR330859(SRX091697)
tissue: skin psoriatic involveddisease state:. (skin)
SRR029125(GSM416754)
U2OS. (cell line)
DRR000556(DRX000314)
"THP-1 whole cell RNA, after 3 day treatment . (cell line)
..........................................................................................................................................................................TCTTTTTTTTTTTTTTTATTAAATG.......................................................2554.000.0019.0022.005.005.00--3.00-------------------------
................................................................................................................................................................TTTTTCTTTTTCTTTTTTTTTTTTTTTACATG..........................................................3210.000.004.003.003.00-----------------------------
................................................................................................................................................................TTTTTCTTTTTCTTTTTTTTTTTTTCTAG.............................................................299.000.00-1.005.003.00----------------------------
...........................................................................................................................................................................CTTTTTTTTTTTTTTTATTAAATG.......................................................248.000.002.004.001.001.00----------------------------
................................................................................................................................................................TTTTTCTTTTTCTTTTTTTTTTTTTTTATATG..........................................................328.000.003.003.00-2.00----------------------------
.................................................................................................................................................................TTTTCTTTTTCTTTTTTTTTTTTTTTACACA..........................................................316.000.002.004.00------------------------------
..........................................................................................................................................................................TCTTTTTTTTTTTTTTTATTAAATT.......................................................255.000.002.003.00------------------------------
..........................................................................................................................................................................TCTTTTTTTTTTTTTTTATTAAAG........................................................245.000.003.00-2.00-----------------------------
...............................................................................................................................................................ATTTTTCTTTTTCTTTTTTTTTTATT.................................................................264.000.00----4.00---------------------------
................................................................................................................................................................TTTTTCTTTTTCTTTTTTTTTTTTTTTATAG...........................................................313.000.002.00--1.00----------------------------
..........................................................................................................................................................................TCTTTTTTTTTTTTTTTATTAAAAG.......................................................253.000.00-2.001.00-----------------------------
...............................................................................................................................................................ATTTTTCTTTTTCTTTTTTTTTTTTCGG...............................................................283.000.00-----3.00--------------------------
................................................................................................................................................................TTTTTCTTTTTCTTTTTTTTTTTTTCCAG.............................................................293.000.00--1.001.00--1.00-------------------------
.................................................................................................................................................................TTTTCTTTTTCTTTTTTTTTTTTTTTACG............................................................293.000.002.001.00------------------------------
.....................................................................................................................................................................CTTTTTCTTTTTTTTTTTTTTTATTTCAG........................................................292.000.00--2.00-----------------------------
.......................................................................................................................................................................TTTTCTTTTTTTTTTTTTTTATTATAG........................................................272.000.001.001.00------------------------------
.................................................................................................................................................................TTTTCTTTTTCTTTTTTTTTTTTTTTACAAG..........................................................312.000.001.001.00------------------------------
................................................................................................................................................................TTTTTCTTTTTCTTTTTTTTTTTTTTTATATT..........................................................322.000.001.00--1.00----------------------------
...............................................................................................................................................................ATTTTTCTTTTTCTTTTTTTTTTCG..................................................................252.000.00-1.00-1.00----------------------------
.....................................................................................................................................................................CTTTTTCTTTTTTTTTTTTTTTATTAATG........................................................292.000.002.00-------------------------------
................................................................................................................................................................................................................ACTCAGGCTGGAGTACAGGGTG....................222.000.00----2.00---------------------------
..................................................................................................................................................................TTTCTTTTTCTTTTTTTTTTTTTTTATTTCG.........................................................312.000.00-----2.00--------------------------
...............................................................................................................................................................ATTTTTCTTTTTCTTTTTTTTTTTTTACG..............................................................292.000.00-1.001.00-----------------------------
...............................................................................................................................................................ATTTTTCTTTTTCTTTTTTTTTTTTTAG...............................................................282.000.002.00-------------------------------
.....................................................................................................................................................................CTTTTTCTTTTTTTTTTTTTTTATTTG..........................................................272.000.001.00-1.00-----------------------------
......................................................................................................................................................................TTTTTCTTTTTTTTTTTTTTTATTCTG.........................................................272.000.00-1.00-1.00----------------------------
..................................................................................................................................................................TTTCTTTTTCTTTTTTTTTTTTTTTATTTCTG........................................................322.000.001.001.00------------------------------
................................................................................................................................................................TTTTTCTTTTTCTTTTTTTTTTTTTATAT.............................................................292.000.00---2.00----------------------------
..............................................................................................................................................................TATTTTTCTTTTTCTTTTTTTTTTTAACG...............................................................292.000.002.00-------------------------------
...............................................................................................................................................................ATTTTTCTTTTTCTTTTTTCAAG....................................................................232.000.00---2.00----------------------------
....................................................................................................................................................................TCTTTTTCTTTTTTTTTTTTTTTACG............................................................262.000.00---1.00-1.00--------------------------
.......................................................................................................................................................................TTTTCTTTTTTTTTTTTTTTATTCTT.........................................................262.000.00-2.00------------------------------
.................................................................................................................................................................TTTTCTTTTTCTTTTTTTTTTTTTTTATTTCTG........................................................332.000.00-2.00------------------------------
..............................................................................................................................................................TATTTTTCTTTTTCTTTTTTTTTTTTTATTG.............................................................312.000.00-1.001.00-----------------------------
...............................................................................................................................................................ATTTTTCTTTTTCTTTTTTTTTTCAG.................................................................262.000.00----2.00---------------------------
..................................................................................................................................................................TTTCTTTTTCTTTTTTTTTTTTTTTACACA..........................................................302.000.001.001.00------------------------------
................................................................................................................................................................TTTTTCTTTTTCTTTTTTTTTTTTTCACG.............................................................292.000.001.00-1.00-----------------------------
.....................................................................................................................................................................CTTTTTCTTTTTTTTTTTTTTTATTTCTG........................................................292.000.001.00--1.00----------------------------
..............................................................................................................................................................TATTTTTCTTTTTCTTTTTTTTTTTTTCGG..............................................................301.000.00-----1.00--------------------------
........................................................................................................................................................................TTTCTTTTTTTTTTTTTTTATGGCA.........................................................251.000.00----1.00---------------------------
................................................................................................................................................................................................................ACTCAGGCTGGAGTACAGCGAC....................221.000.00----1.00---------------------------
.....................................................................................................................................................................CTTTTTCTTTTTTTTTTTTTTTATTACAG........................................................291.000.001.00-------------------------------
................................................................................................................................................................TTTTTCTTTTTCTTTTTTTTTTTTTTTAGGTT..........................................................321.000.00----1.00---------------------------
......................................................................................................................................................................TTTTTCTTTTTTTTTTTTTTTATTCCTG........................................................281.000.00----1.00---------------------------
.......................................................................................................................................................................TTTTCTTTTTTTTTTTTTTTATTATCAG.......................................................281.000.00-1.00------------------------------
..............................................................................................................................................................TATTTTTCTTTTTCTTTTTTTTTTTTTCCAG.............................................................311.000.00---1.00----------------------------
...............................................................................................................................................................ATTTTTCTTTTTCTTTTTTTTTTTTGGTA..............................................................291.000.00-----1.00--------------------------
...............................................................................................................................................................ATTTTTCTTTTTCTTTTTTTTTTTTTTGGTA............................................................311.000.00----1.00---------------------------
.......................................................................................................................................................................TTTTCTTTTTTTTTTTTTTTATAACA.........................................................261.000.00-1.00------------------------------
......................................................................................................................................................................TTTTTCTTTTTTTTTTTTTTTATCATT.........................................................271.000.00------1.00-------------------------
.......................................................................................................................................................................TTTTCTTTTTTTTTTTTTTTATTAAG.........................................................261.000.001.00-------------------------------
.......................................................................................................................................................................TTTTCTTTTTTTTTTTTTTTATTATTCAG......................................................291.000.001.00-------------------------------
..............................................................................................................................................................TATTTTTCTTTTTCTTTTTTTTTTTTTTTATTAT..........................................................3411.001.00-1.00------------------------------
....................................................................................................................................................................TCTTTTTCTTTTTTTTTTTTTTTACTGG..........................................................281.000.00-----1.00--------------------------
...............................................................................................................................................................ATTTTTCTTTTTCTTTTTTTTATTG..................................................................251.000.00--1.00-----------------------------
.................................................................................................................................................................TTTTCTTTTTCTTTTTTTTTTTTTTTATTTCT.........................................................321.000.001.00-------------------------------
.................AGCGGGATCAAGCTGTGTGCATCAG................................................................................................................................................................................................................251.000.00----1.00---------------------------
......................................................................................................................................................................TTTTTCTTTTTTTTTTTTTTTATTTTAG........................................................281.000.00-1.00------------------------------
.........................................................................................................................................................................TTCTTTTTTTTTTTTTTTATTATTATG......................................................271.000.00-1.00------------------------------
.......................................................................................................................................................................TTTTCTTTTTTTTTTTTTTTATATT..........................................................251.000.00-----1.00--------------------------
.......................................................................................................................................................................................................................CTGGAGTACAGTGGCATGAAAAA............231.000.00------------1.00-------------------
....................................................................................................................................................................TCTTTTTCTTTTTTTTTTTTTTTATTATTCG.......................................................311.000.00-1.00------------------------------
.......................................................................................................................................................................TTTTCTTTTTTTTTTTTTTTATTGGTT........................................................271.000.00----1.00---------------------------
..............................................................................................................................................................TATTTTTCTTTTTCTTTTTTTTTTTTTTTCG.............................................................311.000.00---1.00----------------------------
...............................................................................................................................................................ATTTTTCTTTTTCTTTTTTTTTTGGGC................................................................271.000.00-----1.00--------------------------
..............................................................................................................................................................TATTTTTCTTTTTCTTTTTTTTTTTTATTG..............................................................301.000.00--1.00-----------------------------
............................................................................................................................................................................TTTTTTTTTTTTTTTATTACATG.......................................................231.000.00-1.00------------------------------
...................................................................................................................................................................TTCTTTTTCTTTTTTTTTTTTTTTATAAT..........................................................291.000.001.00-------------------------------
..........................................................................................................................................................................TCTTTTTTTTTTTTTTTATTATTTG.......................................................251.000.001.00-------------------------------
......................................................................................................................................................................TTTTTCTTTTTTTTTTTTTTTATTCT..........................................................261.000.00---1.00----------------------------
...............................................................................................................................................................ATTTTTCTTTTTCTTTTTTTTTTCGG.................................................................261.000.00----1.00---------------------------
..............................................................................................................................................................TATTTTTCTTTTTCTTTTTTTAAG....................................................................241.000.00--1.00-----------------------------
................................................................................................................................................................TTTTTCTTTTTCTTTTTTTTTTTTTATAG.............................................................291.000.00-1.00------------------------------
...............................................................................................................................................................ATTTTTCTTTTTCTTTTTTTTAATG..................................................................251.000.00-1.00------------------------------
......................................................................................................................................................................TTTTTCTTTTTTTTTTTTTTTATTATTCTG......................................................301.000.00-1.00------------------------------
.........................................................................................................................................................................TTCTTTTTTTTTTTTTTTATCCTG.........................................................241.000.00-1.00------------------------------
.......................................................................................................................................................................TTTTCTTTTTTTTTTTTTTTATTCTG.........................................................261.000.00--1.00-----------------------------
.................AGCGGGATCAAGCTGTGT.......................................................................................................................................................................................................................1811.001.00----------------------------1.00---
.........................................................................................................................................................................TTCTTTTTTTTTTTTTTTATTATTTTG......................................................271.000.00-1.00------------------------------
.................................................................................................................................................................TTTTCTTTTTCTTTTTTTTTTTTTTTACAGT..........................................................311.000.00------1.00-------------------------
...................................................................................................................................................................TTCTTTTTCTTTTTTTTTTTTTTTACG............................................................271.000.001.00-------------------------------
................................................................................................................................................................TTTTTCTTTTTCTTTTTTTTTTTTTCGG..............................................................281.000.00-----1.00--------------------------
...............................................................................................................................................................ATTTTTCTTTTTCTTTTTTTTTTTTCACG..............................................................291.000.001.00-------------------------------
................................................................................................................................................................................................................ACTCAGGCTGGAGTAGTGT.......................191.000.00------------------1.00-------------
.................................................................................................................................................................................................................CTCAGGCTGGAGTACAGTGGCATGATTTGG...........301.000.00---------1.00----------------------
....................................................................................................................................................................TCTTTTTCTTTTTTTTTTTTTTTACTAG..........................................................281.000.00---1.00----------------------------
..........................................................................................................................................................................TCTTTTTTTTTTTTTTTATTATTTA.......................................................251.000.00-1.00------------------------------
.............................................................................................................................................................................................................ATCACTCAGGCTGGAGTACAGCGGC....................251.000.00----1.00---------------------------
..........................................................................................................................................................................TCTTTTTTTTTTTTTTTATTGGGG........................................................241.000.00----1.00---------------------------
..............................................................................................................................................................TATTTTTCTTTTTCTTTTTTTTTTTTAACG..............................................................301.000.00--1.00-----------------------------
............................................................................................................................................................................TTTTTTTTTTTTTTTATTAAGCG.......................................................231.000.00---1.00----------------------------
.......................................................................................................................................................................TTTTCTTTTTTTTTTTTTTTATTACAAA.......................................................281.000.00------1.00-------------------------
..........................................................................................................................................................................TCTTTTTTTTTTTTTTTATTATCT........................................................241.000.00------1.00-------------------------
...ATATGACTCTCTGCAGCGG....................................................................................................................................................................................................................................1911.001.00-----------------------1.00--------
...............................................................................................................................................................ATTTTTCTTTTTCTTTTTTTTTTTTTTGGAA............................................................311.000.00-----1.00--------------------------
..........................................................................................................................................................................TCTTTTTTTTTTTTTTTATAGGG.........................................................231.000.00----1.00---------------------------
........ACTCTCTGCAGCGGGATCAAGCCGTG........................................................................................................................................................................................................................261.000.00----1.00---------------------------
...............................................................................................................................................................ATTTTTCTTTTTCTTTTTTTTAAC...................................................................241.000.00------1.00-------------------------
......................................................................................................................................................................TTTTTCTTTTTTTTTTTTTTTATGTG..........................................................261.000.00----1.00---------------------------
................................................................................................................................................................TTTTTCTTTTTCTTTTTTTTTTTTTCTA..............................................................281.000.00-----1.00--------------------------
......................................................................................................................................................................TTTTTCTTTTTTTTTTTTTTTATAAG..........................................................261.000.00-1.00------------------------------
.......................................................................................................................................................................TTTTCTTTTTTTTTTTTTTTATTATCAAG......................................................291.000.00-1.00------------------------------
...................................................................................................................................................................TTCTTTTTCTTTTTTTTTTTTTTTACACA..........................................................291.000.00-1.00------------------------------
.....................................................................................................................................................................CTTTTTCTTTTTTTTTTTTTTTATTTTAG........................................................291.000.00-----1.00--------------------------
............................................................................................................................................................................TTTTTTTTTTTTTTTATTACAAG.......................................................231.000.00---1.00----------------------------
................................................................................................................................................................TTTTTCTTTTTCTTTTTTTTTTTTTCCGC.............................................................291.000.00----1.00---------------------------
........................................................................................................................................................................TTTCTTTTTTTTTTTTTTTATTATCCG.......................................................271.000.00--1.00-----------------------------
..........................................................................................................................................................................TCTTTTTTTTTTTTTTTATTAAAT........................................................241.000.001.00-------------------------------
.......................................................................................................................................................................TTTTCTTTTTTTTTTTTTTTATATAG.........................................................261.000.00--1.00-----------------------------
..........................................................................................................................................................................TCTTTTTTTTTTTTTTTATTAAAGG.......................................................251.000.001.00-------------------------------
......................................................................................................................................................................TTTTTCTTTTTTTTTTTTTTTATTTCAC........................................................281.000.00-1.00------------------------------
............................................................................................................................................................................TTTTTTTTTTTTTTTATTATCTAG......................................................241.000.00-1.00------------------------------
...........................................................................................................................................................................CTTTTTTTTTTTTTTTATTAAATT.......................................................241.000.001.00-------------------------------
......TGACTCTCTGCAGCGGGATCAAGCTGTGTGC.....................................................................................................................................................................................................................3111.001.00----1.00---------------------------
.......................................................................................................................................................................TTTTCTTTTTTTTTTTTTTTATTACAAG.......................................................281.000.001.00-------------------------------
.........CTCTCTGCAGCGGGATCA...............................................................................................................................................................................................................................1811.001.00-------------------1.00------------
..............................................................................................................................................................TATTTTTCTTTTTCTTTTTTTAATG...................................................................251.000.00--1.00-----------------------------
..........................................................................................................................................................................TCTTTTTTTTTTTTTTTATCTA..........................................................221.000.001.00-------------------------------
................................................................................................................................................................TTTTTCTTTTTCTTTTTTTTTTTTTCCAT.............................................................291.000.00---1.00----------------------------
..............................................................................................................................................................TATTTTTCTTTTTCTTTTTTTTTTTTTTTATTTT..........................................................341.000.00-1.00------------------------------
.........................................................................................................................................................................TTCTTTTTTTTTTTTTTTATACG..........................................................231.000.00-1.00------------------------------
................................................................................................................................................................TTTTTCTTTTTCTTTTTTTTTTTTTTTATAT...........................................................311.000.001.00-------------------------------
...........................................................................................................................................................................CTTTTTTTTTTTTTTTATTACCGG.......................................................241.000.001.00-------------------------------
.................................................................................................................................................................TTTTCTTTTTCTTTTTTTTTTTTTTTATTTG..........................................................311.000.00-1.00------------------------------
..........................................................................................................................................................................................................TCCATCACTCAGGCTGGAGTACAGCG......................261.000.00----1.00---------------------------
.............................................................................................................................................................................................................ATCACTCAGGCTGGAGTACAGCGG.....................241.000.00----1.00---------------------------
.................................................................................................................................................................TTTTCTTTTTCTTTTTTTTTTTTTTTATTAATG........................................................331.000.00-1.00------------------------------
....................................................................................................................................................................TCTTTTTCTTTTTTTTTTTTTTTATAG...........................................................271.000.001.00-------------------------------
..............................................................................................................................................................TATTTTTCTTTTTCTTTTTTTTTTCAAT................................................................281.000.00------1.00-------------------------
...........................................................................................................................................................................................................CCATCACTCAGGCTGTAG.............................181.000.00------------------------1.00-------
..................................................................................................................................................................TTTCTTTTTCTTTTTTTTTTTTTTTATCT...........................................................291.000.00--1.00-----------------------------
.........................................................................................................................................................................TTCTTTTTTTTTTTTTTTATTATCAG.......................................................261.000.00--1.00-----------------------------
.......................................................................................................................................................................TTTTCTTTTTTTTTTTTTTTATTACG.........................................................261.000.001.00-------------------------------
...............................................................................................................................................................ATTTTTCTTTTTCTTTTTTTTTTTTCTG...............................................................281.000.00--1.00-----------------------------
.........................................................................................................................................................................TTCTTTTTTTTTTTTTTTATTAAATG.......................................................261.000.001.00-------------------------------
.........................................................................................................................................................................TTCTTTTTTTTTTTTTTTATTAATG........................................................251.000.00-1.00------------------------------
..................................................................................................................................................................TTTCTTTTTCTTTTTTTTTTTTTTTATC............................................................281.000.00---1.00----------------------------
...............................................................................................................................................................ATTTTTCTTTTTCTTTTTTTTTTACCC................................................................271.000.00-----1.00--------------------------
..................................................................................................................................................................TTTCTTTTTCTTTTTTTTTTTTTTTACAGG..........................................................301.000.001.00-------------------------------
.......................................................................................................................................................................TTTTCTTTTTTTTTTTTTTTATATTT.........................................................261.000.00--1.00-----------------------------
.............................................................................................................................................................................TTTTTTTTTTTTTTATTATCTCG......................................................231.000.00---1.00----------------------------
.......................................................................................................................................................................TTTTCTTTTTTTTTTTTTTTATTATCAAC......................................................291.000.00-1.00------------------------------
..................................................................................................................................................................TTTCTTTTTCTTTTTTTTTTTTTTTACG............................................................281.000.00-1.00------------------------------
................................................................................................................................................................TTTTTCTTTTTCTTTTTTTTTTTTTTTACATA..........................................................321.000.00---1.00----------------------------
.....................................................................................................................................................................CTTTTTCTTTTTTTTTTTTTTTATTTAT.........................................................281.000.001.00-------------------------------
....................................................................................................................................................................TCTTTTTCTTTTTTTTTTTTTTTATCTT..........................................................281.000.00------1.00-------------------------
.................................................................................................................................................................TTTTCTTTTTCTTTTTTTTTTTTTTTACAC...........................................................301.000.001.00-------------------------------
..................................................................................................................................................................TTTCTTTTTCTTTTTTTTTTTTTTTACAAG..........................................................301.000.001.00-------------------------------
.......................................................................................................................................................................TTTTCTTTTTTTTTTTTTTTATTCTAG........................................................271.000.001.00-------------------------------
..............................................................................................................................................................TATTTTTCTTTTTCTTTTTTTTTTACAG................................................................281.000.00--1.00-----------------------------
...............................................................................................................................................................ATTTTTCTTTTTCTTTTTTTTTTTTAACA..............................................................291.000.00-1.00------------------------------
...............................................................................................................................................................ATTTTTCTTTTTCTTTTTTTTTTTTTTATG.............................................................301.000.001.00-------------------------------
......................................................................................................................................................................TTTTTCTTTTTTTTTTTTTTTATCTC..........................................................261.000.00-----1.00--------------------------
......................................................................................................................................................................TTTTTCTTTTTTTTTTTTTTTATTAGG.........................................................271.000.00-----1.00--------------------------
..........................................................................................................................................................................TCTTTTTTTTTTTTTTTATCTAC.........................................................231.000.001.00-------------------------------
.................................................................................................................................................................TTTTCTTTTTCTTTTTTTTTTTTTTTACAT...........................................................301.000.00------1.00-------------------------
............................................................................................................................................................................TTTTTTTTTTTTTTTATTATTAAG......................................................241.000.00-1.00------------------------------
....................................................................................................................................................................TCTTTTTCTTTTTTTTTTTTTTTACACA..........................................................281.000.001.00-------------------------------
........................................................................................................................................................................TTTCTTTTTTTTTTTTTTTATTAAAAA.......................................................271.000.00-1.00------------------------------
.................................................................................................................................................................TTTTCTTTTTCTTTTTTTTTTTTTTTACCAA..........................................................311.000.001.00-------------------------------
..............................................................................................................................................................TATTTTTCTTTTTCTTTTTTTTTTTTTTTCAG............................................................321.000.00---1.00----------------------------
..............................................................................................................................................................TATTTTTCTTTTTCTTTTTTTTTTTTTAACG.............................................................311.000.001.00-------------------------------
..............................................................................................................................................................TATTTTTCTTTTTCTTTTTTTTTTCAG.................................................................271.000.00--1.00-----------------------------
...............................................................................................................................................................ATTTTTCTTTTTCTTTTTTTTTTCAAC................................................................271.000.00----1.00---------------------------
....................................................................................................................................................................TCTTTTTCTTTTTTTTTTTTTTTACTAA..........................................................281.000.001.00-------------------------------
..................................................................................................................................................................TTTCTTTTTCTTTTTTTTTTTTTTTATTTATT........................................................321.000.001.00-------------------------------
...............................................................................................................................................................ATTTTTCTTTTTCTTTTTTTTACCC..................................................................251.000.00-----1.00--------------------------
....................................................................................................................................................................TCTTTTTCTTTTTTTTTTTTTTTATTTC..........................................................281.000.00-1.00------------------------------
.....................................................................................................................................ATAGTAGGAGATGAGAAAATTT...............................................................................................2211.001.00---------------------------1.00----
.......................................................................................................................................................................TTTTCTTTTTTTTTTTTTTTATTCT..........................................................251.000.00---1.00----------------------------
.................................................................................................................................................................................................................CTCAGGCTGGAGTACAGTGGGAGG.................241.000.00----------------------1.00---------
.......................................................................................................................................................................TTTTCTTTTTTTTTTTTTTTATCTTG.........................................................261.000.00---1.00----------------------------
.......................................................................................................................................................................TTTTCTTTTTTTTTTTTTTTATTACAG........................................................271.000.00---1.00----------------------------
....................................................................................................................................................................TCTTTTTCTTTTTTTTTTTTTTTATAAA..........................................................281.000.001.00-------------------------------
..............................................................................................................................................................TATTTTTCTTTTTCTTTTTTTTTTTCCG................................................................281.000.00---1.00----------------------------
................................................................................................................................................................TTTTTCTTTTTCTTTTTTTTTTTTTTTAGC............................................................301.000.00-----1.00--------------------------
....................................................................................................................................................................TCTTTTTCTTTTTTTTTTTTTTTACCC...........................................................271.000.00-----1.00--------------------------
.......................................................................................................................................................................TTTTCTTTTTTTTTTTTTTTATTAAACC.......................................................281.000.00------1.00-------------------------
................................................................................................................................................................TTTTTCTTTTTCTTTTTTTTTTTTTTTACATT..........................................................321.000.001.00-------------------------------
......................................................................................................................................................................TTTTTCTTTTTTTTTTTTTTTATTAATG........................................................281.000.001.00-------------------------------
............................................................................................................................................................................TTTTTTTTTTTTTTTATTATTTTA......................................................241.000.00------1.00-------------------------
.......................ATCAAGCTGTGTGCATCAG................................................................................................................................................................................................................191.000.00--------------1.00-----------------
.......................................................................................................................................................................TTTTCTTTTTTTTTTTTTTTATTGATT........................................................271.000.00----1.00---------------------------
...........................................................................................................................................................................CTTTTTTTTTTTTTTTATTGGGT........................................................231.000.00------1.00-------------------------
..............................................................................................................................................................TATTTTTCTTTTTCTTTTTTTTTTTTTCAG..............................................................301.000.00---1.00----------------------------
.........................................................................................................................................................................TTCTTTTTTTTTTTTTTTATTCTAG........................................................251.000.00------1.00-------------------------
...............................................................................................................................................................ATTTTTCTTTTTCTTTTTTTTTTTTAAC...............................................................281.000.00----1.00---------------------------
................................................................................................................................................................................................................ACTCAGGCTGGAGTACAGTGGCATGATCG.............2920.500.50----0.50---------------------------
................................................................................................................................................................TTTTTCTTTTTCTTTTTTTTTTTTTTTATTTCTG........................................................3490.330.33-0.22-0.11----------------------------
................................................................................................................................................................TTTTTCTTTTTCTTTTTTTTTTTTTTTATT............................................................3090.330.330.110.110.11-----------------------------
............................................................................................................................................................................TTTTTTTTTTTTTTTATTATGA........................................................2240.250.25------0.25-------------------------
..........................................................................................................................................................................TCTTTTTTTTTTTTTTTATTATG.........................................................2350.200.20-0.20------------------------------
................................................................................................................................................................TTTTTCTTTTTCTTTTTTTTTTTTTTTATTCCTG........................................................3490.110.33-0.11------------------------------
................................................................................................................................................................TTTTTCTTTTTCTTTTTTTTTTTTTTTATTCTG.........................................................3390.110.330.11-------------------------------

Antisense strand
TGGATATGACTCTCTGCAGCGGGATCAAGCTGTGTGCATTAGTACAAATGGTAAGAGATAAATAACTGTCATTCTCTTGGAAATATATTAATTATTTTAGTAATATGTGAATCTGTTCCAGTTCCATACATTTATAGTAGGAGATGAGAAAATTTAGGTATTTTTCTTTTTCTTTTTTTTTTTTTTTATTATGAAGTCTCACTCCATCACTCAGGCTGGAGTACAGTGGCATGATCGTAGCCCGCTGCAG
..................................................................................................................................((((((((((((((.(((((((...(((......)))......))))))).)))))))))))))).......................................................
................................................................................................................................129....................................................................200................................................
SizePerfect hitTotal NormPerfect NormSRR189776(GSM714636)
cell line: HEK293clip variant: CLIPenzymatic . (cell line)
SRR189775(GSM714635)
cell line: HEK293clip variant: CLIPenzymatic . (cell line)
SRR189778(GSM714638)
cell line: HEK293clip variant: PAR-CLIPenzyma. (cell line)
SRR189777(GSM714637)
cell line: HEK293clip variant: PAR-CLIPenzyma. (cell line)
SRR189779(GSM714639)
cell line: HEK293clip variant: PAR-CLIPenzyma. (cell line)
SRR189780(GSM714640)
cell line: HEK293clip variant: PAR-CLIPenzyma. (cell line)
SRR189781(GSM714641)
cell line: HEK293clip variant: PAR-CLIPenzyma. (cell line)
SRR039622(GSM531985)
HCV(+) Adjacent Tissue Sample. (liver)
SRR553576(SRX182782)
source: Testis. (testes)
DRR001488(DRX001042)
"Hela short nuclear cell fraction, LNA(+)". (hela)
SRR330912(SRX091750)
tissue: normal skindisease state: normal. (skin)
SRR037936(GSM510474)
293cand1. (cell line)
SRR039620(GSM531983)
HBV(+) Adjacent Tissue Sample 2. (liver)
SRR094130(GSM651906)
small RNA(18-35nt)small RNA deep sequencing o. (uterus)
SRR189787GSM450601(GSM450601)
miRNA sequencing raw reads from post-mortem s. (brain)
SRR330863(SRX091701)
tissue: skin psoriatic involveddisease state:. (skin)
SRR342901(SRX096797)
small RNA seq of Left atrial tissue. (heart)
SRR444049(SRX128897)
Sample 9cDNABarcode: AF-PP-334: ACG CTC TTC C. (skin)
SRR330904(SRX091742)
tissue: normal skindisease state: normal. (skin)
SRR189785SRR189786GSM450602(GSM450602)
miRNA sequencing raw reads from post-mortem s. (brain)
SRR330869(SRX091707)
tissue: skin psoriatic involveddisease state:. (skin)
GSM450599(GSM450599)
miRNA sequencing raw reads from post-mortem s. (brain)
GSM450605(GSM450605)
miRNA sequencing raw reads from post-mortem s. (brain)
SRR330886(SRX091724)
tissue: skin psoriatic uninvolveddisease stat. (skin)
SRR039623(GSM531986)
HCV(+) HCC Tissue Sample. (liver)
SRR060981(GSM569185)
Human centroblast [09-001]. (cell line)
SRR330859(SRX091697)
tissue: skin psoriatic involveddisease state:. (skin)
SRR029125(GSM416754)
U2OS. (cell line)
DRR000556(DRX000314)
"THP-1 whole cell RNA, after 3 day treatment . (cell line)
.....................................................................................................................................................................................................................GGCTGGAGTACAGTGGCATGAGAGC............ 253.000.00----2.001.00--------------------------
.....................................................................................................................................................................................................................GGCTGGAGTACAGTGGCAGAGC............... 222.000.00----2.00---------------------------
.........................................................................................................GTATGGAACTGGAACAGATTCACA......................................................................................................................... 2411.001.00-----------------1.00--------------
............................................................................................................................................................GGTATTTTTCTTTTTCTTAGGC........................................................................ 221.000.00---------------------1.00----------
..........................................................................................................................................................................................................................GAGTACAGTGGCATGATCGTAGCTG....... 251.000.00-----------------------------1.00--
............................................................................................................ATGTATGGAACTGGAACAGATTC....................................................................................................................... 2311.001.00----------------1.00---------------
.................................................................................................................................................................................................CCTGAGTGATGGAGTGAGACTT................................... 2211.001.00---------------1.00----------------
......TGATCCCGCTGCAGAGAGTCA............................................................................................................................................................................................................................... 2111.001.00-------1.00------------------------
.................................................................................................TAGTAATATGTGAATCTGTTCCAT................................................................................................................................. 241.000.00-------------1.00------------------
......................................................................................................................................................................................................TCACTCCATCACTCACGCA................................. 191.000.00--------------------1.00-----------
.................................................................................................................................................................................................AAGTCTCACTCCATCACGA...................................... 191.000.00--------------------------1.00-----
..................................................................TGTCATTCTCTTGGATTGC..................................................................................................................................................................... 191.000.00----------1.00---------------------
.....................................................................................................................................................................................................................GGCTGGAGTACAGTGGCATGATGACG........... 261.000.00----1.00---------------------------
...............................................................................................................TCTGTTCCAGTTCCAGGG......................................................................................................................... 181.000.00-------------------------1.00------
............................................................................................................................................................................TTTTTTTTTTTTTTTATTACACA....................................................... 231.000.00-----------1.00--------------------
..................................................................................................TGGAACTGGAACAGATTCACATATTACT............................................................................................................................ 2811.001.00-------1.00------------------------
...............................................................................................................TAAATGTATGGAACTGGAACAGA.................................................................................................................... 2311.001.00-------1.00------------------------
............................................................................................................................................................................TCATAATAAAAAAAAAAAAAAA........................................................ 2240.250.25------------------------------0.25-
.......CCGCTGCAGAGAGTC.................................................................................................................................................................................................................................... 1550.200.20-------------------------------0.20
.............................................................................................................................................................................TCATAATAAAAAAAAAAAAAA........................................................ 2160.170.17------------------------------0.17-