ID: uc002hbq.2_intron_9_0_chr17_26910668_r
GENE: (14)
chr17:26910618-26910920-


(1)
AGO1.ip 		(1)
AGO1.ip OTHER.mut 		(6)
AGO2.ip 		(2)
AGO3.ip 		(5)
B-CELL 		(2)
BRAIN 		(13)
BREAST 		(56)
CELL-LINE 		(3)
CERVIX 		(1)
FIBROBLAST 		(4)
HEART 		(8)
HELA 		(1)
KIDNEY 		(7)
LIVER 		(2)
OTHER 		(1)
RRP40.ip 		(35)
SKIN 		(1)
TESTES 		(1)
UTERUS 		(1)
XRN.ip

Sense strand
GAGCGCAGCTTGCAGTGTGAGAACCTCAAGGACACTGTAGAGAACCTAACGTAAGTTCTCTAACTTTCTGTACTTCCCCCTAAGTGCTTATTTTTTTCTCAGGAACACTTCTAGAAGCCAAAATCTCCAAGAAGAGAACTGTGAGTGTTGAGCCTCTTGTTTCTCTCCTTTAATGCAGCTCTGTGGGGATTTGGGATAGGCGTTCAGAGAAGGTAATTTGGTCTTTGGTCATCTTCCCTGTTCCTTATTTCAGGGCTAAACTGGCCAGCACCATAGCAGATAACCAGGAGCAAGATCTGGAGA
.........................................................................................................................................................................................(((((..((((((((...(((((((.((....))..)))))))........))))))))..)))))....................................................
.........................................................................................................................................................................................186................................................................253................................................
SizePerfect hitTotal NormPerfect NormSRR387910(GSM843862)
antibody for ip: Ago2. (ago2 cell line)		SRR189782SRR037937(GSM510475)
293cand2. (cell line)		SRR037940(GSM510478)
293cand5_rep2. (cell line)		DRR001488(DRX001042)
"Hela short nuclear cell fraction, LNA(+)". (hela)		SRR037935(GSM510473)
293cand3. (cell line)		SRR207114(GSM721076)
"IP against AGO 1 & 2, RRP40 knockdown". (ago1/2 RRP40 cell line)		SRR207115(GSM721077)
XRN1&2 knockdown. (XRN1/XRN2 cell line)		GSM1105750AGO3(GSM1105750)
small RNA sequencing data. (ago3 hela)		SRR387909(GSM843861)
specific-host: Homo sapienshost cell line: Su. (cell line)		RoviraIPAgo2(Rovira)
total RNA. (ago2 breast)		SRR037938(GSM510476)
293Red. (cell line)		SRR207111(GSM721073)
Whole cell RNA. (cell line)		SRR189783SRR207112(GSM721074)
RRP40 knockdown. (RRP40 cell line)		SRR330919(SRX091757)
tissue: normal skindisease state: normal. (skin)		SRR037939(GSM510477)
293cand5_rep1. (cell line)		GSM1105748AGO1(GSM1105748)
small RNA sequencing data. (ago1 hela)		DRR000557(DRX000315)
"THP-1 whole cell RNA, after 3 day treatment . (cell line)		SRR029127(GSM416756)
A549. (cell line)		SRR029125(GSM416754)
U2OS. (cell line)		SRR037942(GSM510480)
293DroshaTN_cand5. (cell line)		SRR189784SRR553575(SRX182781)
source: Kidney. (Kidney)		SRR033715(GSM497060)
Mantle Cell Lymphoma (Mino122). (B cell)		SRR330902(SRX091740)
tissue: skin psoriatic uninvolveddisease stat. (skin)		SRR330889(SRX091727)
tissue: skin psoriatic uninvolveddisease stat. (skin)		SRR039621(GSM531984)
HBV(+) HCC Tissue Sample 2. (liver)		SRR039625(GSM531988)
HBV(-) HCV(-) HCC Tissue Sample. (liver)		SRR189787SRR039190(GSM494809)
PBMCs were isolated by ficoll gradient from t. (blood)		SRR330890(SRX091728)
tissue: skin psoriatic uninvolveddisease stat. (skin)		SRR039192(GSM494811)
K562 cell line is derived from a CML patient . (cell line)		SRR033721(GSM497066)
Ly3 cell line (Ly3). (B cell)		SRR189779(GSM714639)
cell line: HEK293clip variant: PAR-CLIPenzyma. (cell line)		GSM1105749AGO2(GSM1105749)
small RNA sequencing data. (ago2 hela)		SRR037941(GSM510479)
293DroshaTN. (cell line)		SRR189786SRR039613(GSM531976)
Human Normal Liver Tissue Sample 3. (liver)		SRR039622(GSM531985)
HCV(+) Adjacent Tissue Sample. (liver)		SRR037944(GSM510482)
293DcrTN_cand5. (cell line)		SRR330916(SRX091754)
tissue: normal skindisease state: normal. (skin)		SRR330886(SRX091724)
tissue: skin psoriatic uninvolveddisease stat. (skin)		SRR060981(GSM569185)
Human centroblast [09-001]. (cell line)		DRR001489(DRX001043)
"Hela short nuclear cell fraction, control". (hela)		SRR330872(SRX091710)
tissue: skin psoriatic involveddisease state:. (skin)		SRR330880(SRX091718)
tissue: skin psoriatic involveddisease state:. (skin)		SRR330912(SRX091750)
tissue: normal skindisease state: normal. (skin)		SRR060983(GSM569187)
Human pre-germinal center B cell [09-001]. (cell line)		SRR330900(SRX091738)
tissue: skin psoriatic uninvolveddisease stat. (skin)		DRR000555(DRX000313)
"THP-1 whole cell RNA, no treatment". (cell line)		GSM450607(GSM450607)
miRNA sequencing raw reads from post-mortem s. (brain)		SRR553572(SRX182778)
source: Frontal Cortex. (Frontal Cortex)		SRR040028(GSM532913)
G026N. (cervix)		SRR330863(SRX091701)
tissue: skin psoriatic involveddisease state:. (skin)		DRR000556(DRX000314)
"THP-1 whole cell RNA, after 3 day treatment . (cell line)		DRR000558(DRX000316)
"THP-1 whole cell RNA, after 3 day treatment . (cell line)		SRR060984(GSM569188)
Human plasma cell [09-001]. (cell line)		SRR330887(SRX091725)
tissue: skin psoriatic uninvolveddisease stat. (skin)		SRR330896(SRX091734)
tissue: skin psoriatic uninvolveddisease stat. (skin)		DRR000559(DRX000317)
"THP-1 whole cell RNA, no treatment". (cell line)		SRR553576(SRX182782)
source: Testis. (testes)		SRR038857(GSM458540)
D20. (cell line)		SRR330877(SRX091715)
tissue: skin psoriatic involveddisease state:. (skin)		SRR330894(SRX091732)
tissue: skin psoriatic uninvolveddisease stat. (skin)		SRR107296(GSM677703)
18-30nt fraction of small RNA. (cell line)		SRR326282(GSM769512)
"Dicer mRNA was knocked down using siDicer, t. (cell line)		SRR038863(GSM458546)
MM603. (cell line)		SRR207116(GSM721078)
Nuclear RNA. (cell line)		SRR330866(SRX091704)
tissue: skin psoriatic involveddisease state:. (skin)		DRR001485(DRX001039)
"Hela long total cell fraction, LNA(+)". (hela)		SRR330920(SRX091758)
tissue: normal skindisease state: normal. (skin)		SRR039623(GSM531986)
HCV(+) HCC Tissue Sample. (liver)		SRR189781(GSM714641)
cell line: HEK293clip variant: PAR-CLIPenzyma. (cell line)		SRR330867(SRX091705)
tissue: skin psoriatic involveddisease state:. (skin)		SRR330921(SRX091759)
tissue: normal skindisease state: normal. (skin)		SRR330865(SRX091703)
tissue: skin psoriatic involveddisease state:. (skin)		SRR039616(GSM531979)
HBV(+) Distal Tissue Sample 1. (liver)		SRR040018(GSM532903)
G701N. (cervix)		SRR094129(GSM651905)
small RNA(18-35nt)small RNA deep sequencing o. (uterus)		DRR000561(DRX000319)
Isolation of RNA following immunoprecipitatio. (ago2 cell line)		SRR330879(SRX091717)
tissue: skin psoriatic involveddisease state:. (skin)		SRR107297(GSM677704)
18-30nt fraction of small RNA. (cell line)		SRR330857(SRX091695)
tissue: skin psoriatic involveddisease state:. (skin)		TAX577588(Rovira)
total RNA. (breast)		SRR330881(SRX091719)
tissue: skin psoriatic uninvolveddisease stat. (skin)		DRR000562(DRX000320)
Isolation of RNA following immunoprecipitatio. (ago3 cell line)		SRR330888(SRX091726)
tissue: skin psoriatic uninvolveddisease stat. (skin)		SRR342894(SRX096790)
small RNA seq of Right atrial tissue. (heart)		SRR330906(SRX091744)
tissue: normal skindisease state: normal. (skin)		SRR191590(GSM715700)
48genomic small RNA (size selected RNA from t. (breast)		SRR191633(GSM715743)
85genomic small RNA (size selected RNA from t. (breast)		SRR191465(GSM715575)
113genomic small RNA (size selected RNA from . (breast)		SRR342901(SRX096797)
small RNA seq of Left atrial tissue. (heart)		SRR330903(SRX091741)
tissue: skin psoriatic uninvolveddisease stat. (skin)		SRR326279(GSM769509)
cytoplasmic fraction was isolated using PARIS. (cell line)		SRR191492(GSM715602)
154genomic small RNA (size selected RNA from . (breast)		SRR033724(GSM497069)
L428 cell line (L428). (B cell)		GSM1105753INPUT(GSM1105753)
small RNA sequencing data. (hela)		SRR191425(GSM715535)
141genomic small RNA (size selected RNA from . (breast)		GSM416733(GSM416733)
HEK293. (cell line)		SRR330923(SRX091761)
tissue: normal skindisease state: normal. (skin)		SRR330904(SRX091742)
tissue: normal skindisease state: normal. (skin)		SRR314796(SRX084354)
"Total RNA, fractionated (15-30nt)". (cell line)		SRR189785SRR029128(GSM416757)
H520. (cell line)		SRR037931(GSM510469)
293GFP. (cell line)		SRR060982(GSM569186)
Human centrocyte [09-001]. (cell line)		SRR039636(GSM518473)
THP1_cyto_sRNAs. (cell line)		SRR330884(SRX091722)
tissue: skin psoriatic uninvolveddisease stat. (skin)		GSM532890(GSM532890)
G576T. (cervix)		TAX577741(Rovira)
total RNA. (breast)		SRR330917(SRX091755)
tissue: normal skindisease state: normal. (skin)		SRR038861(GSM458544)
MM466. (cell line)		SRR191531(GSM715641)
134genomic small RNA (size selected RNA from . (breast)		SRR330899(SRX091737)
tissue: skin psoriatic uninvolveddisease stat. (skin)		SRR330861(SRX091699)
tissue: skin psoriatic involveddisease state:. (skin)		SRR038859(GSM458542)
MM386. (cell line)		SRR330901(SRX091739)
tissue: skin psoriatic uninvolveddisease stat. (skin)		SRR191627(GSM715737)
45genomic small RNA (size selected RNA from t. (breast)		DRR001486(DRX001040)
"Hela long cytoplasmic cell fraction, LNA(+)". (hela)		SRR390723(GSM850202)
total small RNA. (cell line)		SRR039635(GSM518472)
THP1_nuc_sRNAs. (cell line)		GSM956925Ago2D5(GSM956925)
"cell line: HEK293 cell linepassages: 15-20ip. (ago2 cell line)		SRR342900(SRX096796)
small RNA seq of Right atrial tissue. (heart)		GSM956925AGO2Paz8(GSM956925)
"cell line: HEK293 cell linepassages: 15-20ip. (ago2 cell line)		TAX577579(Rovira)
total RNA. (breast)		GSM450602(GSM450602)
miRNA sequencing raw reads from post-mortem s. (brain)		SRR037934(GSM510472)
293cand4_rep3. (cell line)		SRR060169(GSM565979)
5-8F_cytoplasm. (cell line)		SRR330869(SRX091707)
tissue: skin psoriatic involveddisease state:. (skin)		SRR191625(GSM715735)
32genomic small RNA (size selected RNA from t. (breast)		SRR033728(GSM497073)
MALT (MALT413). (B cell)		SRR029131(GSM416760)
MCF7. (cell line)		SRR060986(GSM569190)
Human memory B cell [09-001]. (cell line)		SRR038856(GSM458539)
D11. (cell line)		SRR038862(GSM458545)
MM472. (cell line)		SRR039619(GSM531982)
HBV(+) HCC Tissue Sample 1. (liver)		SRR326280(GSM769510)
total cell content of unperturbed cells was s. (cell line)		GSM956925Paz8D5(GSM956925)
"cell line: HEK293 cell linepassages: 15-20ip. (cell line)		SRR363674(GSM830251)
cell type: human foreskin fibroblasts (HFF)tr. (fibroblast)		TAX577745(Rovira)
total RNA. (breast)		SRR033729(GSM497074)
splenic MZL (Splenic414). (B cell)		SRR553574(SRX182780)
source: Heart. (Heart)		SRR330859(SRX091697)
tissue: skin psoriatic involveddisease state:. (skin)
..............................................................................................................................................................................................TTGGGATAGGCGTTCAGAGAAGGT.........................................................................................241189.00189.0097.00--10.002.002.001.00-3.006.002.007.00---3.005.00-2.00----2.00-1.002.001.00--1.002.001.00---3.00-1.00--1.001.001.002.001.001.00--2.00--1.00--2.00----1.001.00-1.00-1.00-1.00-1.00-1.00----1.00---1.001.00-------1.00-----1.00-1.00--1.00-----1.001.00---------1.00-----1.001.00---------1.00-----1.00--1.001.00
..............................................................................................................................................................................................TTGGGATAGGCGTTCAGAGAAG...........................................................................................22168.0068.0056.00------1.00--1.00----1.00-------1.00----1.00------------------------1.001.00---1.001.001.00------1.00----------------------------------------------------------------1.00------------
...............................................................................................................................................................................................TGGGATAGGCGTTCAGAGAAGGT.........................................................................................23155.0055.0036.00---3.00---1.003.002.00---------1.00---------1.00----------------1.002.00-----------------------------------------1.00-1.00----------------------1.00-----------------------1.00-1.00---
..............................................................................................................................................................................................TTGGGATAGGCGTTCAGAGAAGG..........................................................................................23152.0052.0019.00------2.005.00------1.00-1.00-2.00------------2.00--2.00----------------------1.00-----1.00-1.00-------1.001.00------1.001.00----------1.00----1.00-1.00---1.00---1.00---1.00--------1.00-----1.00--1.00----1.001.00-------
.............................................................................................................................................................................................TTTGGGATAGGCGTTCAGAGAAGGT.........................................................................................25126.0026.0015.00-----------------2.00-1.00--------1.001.00---------2.00---------------1.00-----1.001.001.00--------------------------------------------------------------------------------
........................................................................................................................................................................................................................................CTTCCCTGTTCCTTATTTCAGT.................................................22117.006.00-6.00-----------4.00-----------------1.00----------2.00----1.00--------------------1.00--1.00--------------1.00----------------------------------------------------------
..................................................................................................................................................................................................GATAGGCGTTCAGAGAAGGTAT.......................................................................................2213.000.00--13.00----------------------------------------------------------------------------------------------------------------------------------------------
..............................................................................................................................................................................................TTGGGATAGGCGTTCAGAGA.............................................................................................20112.0012.002.00--------------1.00----------1.00-2.00------------------------1.001.00--2.00-----------------------------1.00------------------------1.00--------------------------------
..............................................................................................................................................................................................TTGGGATAGGCGTTCAGAGAA............................................................................................21110.0010.001.00-----------2.00-2.00---1.00-------------------1.00------------2.00-------1.00-------------------------------------------------------------------------------------
...............................................................................................................................................................................................TGGGATAGGCGTTCAGAGAAGG..........................................................................................22110.0010.007.00---------------------------------------------------1.00---------1.00------------------------------------------------1.00---------------------------------
.............................................................................................................................................................................................TTTGGGATAGGCGTTCAGAGAAGG..........................................................................................24110.0010.002.00----7.00-----------------------1.00-------------------------------------------------------------------------------------------------------------------
..............................................................................................................................................................................................TTGGGATAGGCGTTCAGAGAAGGA.........................................................................................2419.0052.00-----------------4.00--------------------------------------1.00----------------------------1.00--1.00--------------------------------1.00---1.00-------------------
................................CACTGTAGAGAACCTAAC.............................................................................................................................................................................................................................................................1817.007.00----2.00--3.00---------------1.00------------------------------------------------------------------------------------------------------------------1.00------
..............................................................................................................................................................................................TTGGGATAGGCGTTCAGAGAAGGTT........................................................................................2516.00189.00---------------------------1.00----------1.00----1.00------------------------------------------------------1.00------------------------------1.00------------1.00--
.......................................................................................................................................................................................................................................TCTTCCCTGTTCCTTATTTCAGT.................................................2316.004.00-5.00--------------------------------------------------------------------------------------------------------------------------------1.00--------------
........................................................................................................................................................................................................................................CTTCCCTGTTCCTTATTTCAG..................................................2116.006.00-5.00--------------------1.00--------------------------------------------------------------------------------------------------------------------------
................................................................................................................................................................................................GGGATAGGCGTTCAGAGAAGGTAGA......................................................................................255.000.00------5.00------------------------------------------------------------------------------------------------------------------------------------------
.............................................................................................................................................................................................TTTGGGATAGGCGTTCAGAGAA............................................................................................2215.005.004.00-------------1.00----------------------------------------------------------------------------------------------------------------------------------
...............................................................................................................................................................................................TGGGATAGGCGTTCAGAGAAGGTAA.......................................................................................2514.004.004.00------------------------------------------------------------------------------------------------------------------------------------------------
.......................................................................................................................................................................................................................................TCTTCCCTGTTCCTTATTTCAG..................................................2214.004.00-3.00--------------------1.00--------------------------------------------------------------------------------------------------------------------------
.......................CCTCAAGGACACTGTAGAGAACCTAAC.............................................................................................................................................................................................................................................................2714.004.00----2.00---------------------------------------------1.00---------------------------------------------------------------------------1.00------------------
...CGCAGCTTGCAGTGTGAGAACCTCAAGGA...............................................................................................................................................................................................................................................................................2914.004.00---------------------4.00---------------------------------------------------------------------------------------------------------------------------
.................................ACTGTAGAGAACCTAAC.............................................................................................................................................................................................................................................................1714.004.00--------------------------------------------------1.00---------------1.00------------------------1.00----------------------------1.00------------------------
...............................................................................................................................................................................................TGGGATAGGCGTTCAGAGAAG...........................................................................................2113.003.00----------1.00-1.00----------------------------------------------------------------1.00-------------------------------------------------------------------
...............................................................................................................................................................................................TGGGATAGGCGTTCAGAGA.............................................................................................1913.003.003.00------------------------------------------------------------------------------------------------------------------------------------------------
...............................................................................................................................................................................................TGGGATAGGCGTTCAGAGAAGGTAG.......................................................................................253.000.00------3.00------------------------------------------------------------------------------------------------------------------------------------------
..............................................................................................................................................................................................TTGGGATAGGCGTTCAGAGAAGGTAT.......................................................................................2613.002.00-------1.00--------------------------------1.00--------------------------------------------------------------------------------------------1.00-----------
..............................................................................................................................................................................................TTGGGATAGGCGTTCAGA...............................................................................................1813.003.00--------------------3.00----------------------------------------------------------------------------------------------------------------------------
..............................................................................................................................................................................................TTGGGATAGGCGTTCAGAGAAGGAA........................................................................................2513.0052.00-------------------3.00-----------------------------------------------------------------------------------------------------------------------------
.................................................................................................................................................................TCTCTCCTTTAATGCAGC............................................................................................................................1812.002.00-------------------------2.00-----------------------------------------------------------------------------------------------------------------------
.............................................................................................................................................................................................TTTGGGATAGGCGTTCAGAGA.............................................................................................2112.002.001.00-----------1.00------------------------------------------------------------------------------------------------------------------------------------
..............................................................................................................................................................................................TTGGGATAGGCGTTCAGAGAAGGC.........................................................................................2412.0052.00----------------1.00--------1.00-----------------------------------------------------------------------------------------------------------------------
.............................................................................................................................................................................................TTTGGGATAGGCGTTCAGAGAAGGTT........................................................................................2612.0026.002.00------------------------------------------------------------------------------------------------------------------------------------------------
..................................................................................................................................................................................................GATAGGCGTTCAGAGAAGGCAT.......................................................................................222.000.00--2.00----------------------------------------------------------------------------------------------------------------------------------------------
.....................AACCTCAAGGACACTGTA........................................................................................................................................................................................................................................................................1812.002.00------------------------2.00------------------------------------------------------------------------------------------------------------------------
..............................................................................................................................................................................................TTGGGATAGGCGTTCAGAG..............................................................................................1912.002.00------------2.00------------------------------------------------------------------------------------------------------------------------------------
.........................TCAAGGACACTGTAGAGAACCT................................................................................................................................................................................................................................................................2212.002.00-------2.00-----------------------------------------------------------------------------------------------------------------------------------------
..................................................................................AGTGCTTATTTTTTTCTCAGGAACACTTCTAGAAGCCAAAATCTCCAAGAAGAG.......................................................................................................................................................................5412.002.00----------------------------------------------------------------------2.00--------------------------------------------------------------------------
................................................................................................................................AAGAAGAGAACTGTGAGTGTTGA........................................................................................................................................................2312.002.00------------------------------------------------------------------------2.00------------------------------------------------------------------------
..............................................................................................................................................................................................TTGGGATAGGCGTTCAGAGAAGT..........................................................................................2312.0068.00------------------------------------------------------------------------------------------------1.00-----------------1.00------------------------------
.......................................................................................................................................................................................................................................TCTTCCCTGTTCCTTATTTC....................................................2012.002.00-1.00---------------------------1.00-------------------------------------------------------------------------------------------------------------------
.........................................................................................................................................................................................................................................TTCCCTGTTCCTTATTTCAG..................................................2012.002.00-1.00------------------------------------------------------------------------------------------------------------------1.00----------------------------
..............................................................................................................................................................................................TTGGGATAGGCGTTCAGAGAAGGTA........................................................................................2512.002.00-----------------------------------1.00----------1.00--------------------------------------------------------------------------------------------------
.......................................................................................................................................................................................................................................TCTTCCCTGTTCCTTATTTCAT..................................................222.000.00----------------------2.00--------------------------------------------------------------------------------------------------------------------------
.........................................................................................................................................................................................................................................TTCCCTGTTCCTTATTTCAGT.................................................2112.002.00-------------2.00-----------------------------------------------------------------------------------------------------------------------------------
...............................................................................................................................................................................................TGGGATAGGCGTTCAGAGAA............................................................................................2012.002.00--------------2.00----------------------------------------------------------------------------------------------------------------------------------
...................................TGTAGAGAACCTAACGGCT.........................................................................................................................................................................................................................................................191.000.00---------------------------------1.00---------------------------------------------------------------------------------------------------------------
........................................................................................................................................................................................................................................CTTCCCTGTTCCTTATT......................................................1711.001.00-------------------------------------------------------------------------1.00-----------------------------------------------------------------------
..............................................................................................................................................................................................TTGGGATAGGCGTTCAGAGAAGGCT........................................................................................2511.0052.00-------------------------------------1.00-----------------------------------------------------------------------------------------------------------
..............................................................................................................................................................................................TTGGGATAGGCGTTCAGAGAAA...........................................................................................2211.0010.00-----------------------------------------1.00-------------------------------------------------------------------------------------------------------
..............................................................................................................................................................................................TTGGGATAGGCGTTCAGAGAAGGTATC......................................................................................2711.002.00-------------------------------------------------------------------------------------------------------1.00-----------------------------------------
......................ACCTCAAGGACACTGTAGA......................................................................................................................................................................................................................................................................1911.001.00---------------------------------1.00---------------------------------------------------------------------------------------------------------------
..............................................................................................................................................................................................TTGGGATAGGCGTTCAGAGAAGA..........................................................................................2311.0068.00-----------------------------------------------------------------------------------------------------------------------1.00-------------------------
...........................................................................................................................................................................................................................................CCCTGTTCCTTATTTCATT.................................................191.000.00-1.00-----------------------------------------------------------------------------------------------------------------------------------------------
..........................................................................................................................................................TCTTGTTTCTCTCCTTCTCT.................................................................................................................................201.000.00-------------------------------------------------------------------------1.00-----------------------------------------------------------------------
...............................................................................................................................................................................................TGGGATAGGCGTTCAGAGAAGGTAT.......................................................................................251.000.00-------------------------------------1.00-----------------------------------------------------------------------------------------------------------
........................CTCAAGGACACTGTAGAGC....................................................................................................................................................................................................................................................................191.000.00------------------------------------------------------------------------------------1.00------------------------------------------------------------
................................CACTGTAGAGAACCTAACGGCT.........................................................................................................................................................................................................................................................221.000.00---------------------------------------1.00---------------------------------------------------------------------------------------------------------
................................CACTGTAGAGAACCTAACGG...........................................................................................................................................................................................................................................................201.000.00---------------------------------1.00---------------------------------------------------------------------------------------------------------------
..............................................................................................................................................................................................TTGGGATAGGCGTTCAGAGAAGGG.........................................................................................2411.0052.001.00------------------------------------------------------------------------------------------------------------------------------------------------
...............................................................................................................................................................................................TGGGATAGGCGTTCAGAGAAGGTTTT......................................................................................2611.0055.00-----------------------------------------------------------------1.00-------------------------------------------------------------------------------
........................................................................................................................................................................................................................................................................................TAACCAGGAGCAAGATCTGGAG.2211.001.00---------------------------------------1.00---------------------------------------------------------------------------------------------------------
..............................................................................................................................................................................................TTGGGATAGGCGTTCAGAAAA............................................................................................2111.003.00--------------1.00----------------------------------------------------------------------------------------------------------------------------------
..............................................................................................................................................................................................TTGGGATAGGCGTTCAGAGAAGGTAA.......................................................................................2611.001.00-------------------------------------------1.00-----------------------------------------------------------------------------------------------------
.............................................................................................................................................................................................................................................................................................AGGAGCAAGATCTGGAGA1811.001.00------------------------1.00------------------------------------------------------------------------------------------------------------------------
..........TGCAGTGTGAGAACCTCAAGGACACC...........................................................................................................................................................................................................................................................................261.000.00----------------------------------1.00--------------------------------------------------------------------------------------------------------------
..............................................................................................................................................................................................TTGGGATAGGCGTTCAGAGAAGGTG........................................................................................2511.00189.00------------------------------------------------------------------------------------------------------------1.00------------------------------------
..........................CAAGGACACTGTAGAGAAC..................................................................................................................................................................................................................................................................1911.001.00--------------------------------------------------------------------1.00----------------------------------------------------------------------------
...........................................................................................................................................................................................................................................CCCTGTTCCTTATTTCAG..................................................1811.001.00-1.00-----------------------------------------------------------------------------------------------------------------------------------------------
..........................CAAGGACACTGTAGAGAACCTAACGGCT.........................................................................................................................................................................................................................................................281.000.00---------------------------------------------------------------------------------------------1.00---------------------------------------------------
...............................................................................................................................................................................................TGGGATAGGCGTTCAGAGAAGGC.........................................................................................2311.0010.001.00------------------------------------------------------------------------------------------------------------------------------------------------
........................................................................................................................................................................................................................................CTTCCCTGTTCCTTATTTCAGA.................................................2211.006.00------------------------------------------------------------------------------------------------------1.00------------------------------------------
........................................................................................................................................................................................................................................CTTCCCTGTTCCTTATTTCAC..................................................211.000.00-1.00-----------------------------------------------------------------------------------------------------------------------------------------------
...........................AAGGACACTGTAGAGTCTG.................................................................................................................................................................................................................................................................191.000.00----------------------------------------------------------------------------------------------------------------------1.00--------------------------
.............................................................................................................................................................................................TTTGGGATAGGCGTTCAGA...............................................................................................1911.001.00----------1.00--------------------------------------------------------------------------------------------------------------------------------------
.............................................................................................................................................................................................................................................................................................AGGAGCAAGATCTGGAGT181.000.00------------------------1.00------------------------------------------------------------------------------------------------------------------------
...............................................................................CTAAGTGCTTATTTTGCA..............................................................................................................................................................................................................181.000.00--1.00----------------------------------------------------------------------------------------------------------------------------------------------
........................................................................................................................................................................................................................................CTTCCCTGTTCCTTATTTCAGC.................................................2211.006.00-1.00-----------------------------------------------------------------------------------------------------------------------------------------------
.............................................................................................................................................................................................TTTGGGATAGGCGTTCAGAGGCG...........................................................................................231.000.00---------------------------1.00---------------------------------------------------------------------------------------------------------------------
.........................TCAAGGACACTGTAGAGAACCTAACGGCT.........................................................................................................................................................................................................................................................291.000.00----------1.00--------------------------------------------------------------------------------------------------------------------------------------
............................................................................................................................................................................................ATTTGGGATAGGCGTTCAGAGAAGGTAATTTGG..................................................................................3311.001.00----------------------------------1.00--------------------------------------------------------------------------------------------------------------
.............................................................................................................................................................................................TTTGGGATAGGCGTTCAGAGC.............................................................................................211.000.00------------------------------------------------------------------------------1.00------------------------------------------------------------------
..................................................................................................................................................................................................................................................................AACTGGCCAGCACCACAGC..........................191.000.00----------------------------------1.00--------------------------------------------------------------------------------------------------------------
.........................................................................................................................................................................................................................................TTCCCTGTTCCTTATTTCAGTT................................................2211.002.00---------------------------------------------------------------------------------------------------------------------------------------1.00---------
.........................TCAAGGACACTGTAGAGAACCTAACGG...........................................................................................................................................................................................................................................................271.000.00---------------------------------------1.00---------------------------------------------------------------------------------------------------------
.........................TCAAGGACACTGTAGAGAACCTAACGGC..........................................................................................................................................................................................................................................................281.000.00-------------------------------------------------------------1.00-----------------------------------------------------------------------------------
.............................................................................................................................................................................................TTTGGGATAGGCGTTCAGAGAAG...........................................................................................2311.001.00---------------------------------------------1.00---------------------------------------------------------------------------------------------------
...................................TGTAGAGAACCTAAC.............................................................................................................................................................................................................................................................1530.330.33--------------------------------------------0.33----------------------------------------------------------------------------------------------------
.....................................................................................................................................................................................................AGGCGTTCAGAGAAG...........................................................................................1560.330.330.33------------------------------------------------------------------------------------------------------------------------------------------------

Antisense strand
GAGCGCAGCTTGCAGTGTGAGAACCTCAAGGACACTGTAGAGAACCTAACGTAAGTTCTCTAACTTTCTGTACTTCCCCCTAAGTGCTTATTTTTTTCTCAGGAACACTTCTAGAAGCCAAAATCTCCAAGAAGAGAACTGTGAGTGTTGAGCCTCTTGTTTCTCTCCTTTAATGCAGCTCTGTGGGGATTTGGGATAGGCGTTCAGAGAAGGTAATTTGGTCTTTGGTCATCTTCCCTGTTCCTTATTTCAGGGCTAAACTGGCCAGCACCATAGCAGATAACCAGGAGCAAGATCTGGAGA
.........................................................................................................................................................................................(((((..((((((((...(((((((.((....))..)))))))........))))))))..)))))....................................................
.........................................................................................................................................................................................186................................................................253................................................
SizePerfect hitTotal NormPerfect NormSRR387910(GSM843862)
antibody for ip: Ago2. (ago2 cell line)		SRR189782SRR037937(GSM510475)
293cand2. (cell line)		SRR037940(GSM510478)
293cand5_rep2. (cell line)		DRR001488(DRX001042)
"Hela short nuclear cell fraction, LNA(+)". (hela)		SRR037935(GSM510473)
293cand3. (cell line)		SRR207114(GSM721076)
"IP against AGO 1 & 2, RRP40 knockdown". (ago1/2 RRP40 cell line)		SRR207115(GSM721077)
XRN1&2 knockdown. (XRN1/XRN2 cell line)		GSM1105750AGO3(GSM1105750)
small RNA sequencing data. (ago3 hela)		SRR387909(GSM843861)
specific-host: Homo sapienshost cell line: Su. (cell line)		RoviraIPAgo2(Rovira)
total RNA. (ago2 breast)		SRR037938(GSM510476)
293Red. (cell line)		SRR207111(GSM721073)
Whole cell RNA. (cell line)		SRR189783SRR207112(GSM721074)
RRP40 knockdown. (RRP40 cell line)		SRR330919(SRX091757)
tissue: normal skindisease state: normal. (skin)		SRR037939(GSM510477)
293cand5_rep1. (cell line)		GSM1105748AGO1(GSM1105748)
small RNA sequencing data. (ago1 hela)		DRR000557(DRX000315)
"THP-1 whole cell RNA, after 3 day treatment . (cell line)		SRR029127(GSM416756)
A549. (cell line)		SRR029125(GSM416754)
U2OS. (cell line)		SRR037942(GSM510480)
293DroshaTN_cand5. (cell line)		SRR189784SRR553575(SRX182781)
source: Kidney. (Kidney)		SRR033715(GSM497060)
Mantle Cell Lymphoma (Mino122). (B cell)		SRR330902(SRX091740)
tissue: skin psoriatic uninvolveddisease stat. (skin)		SRR330889(SRX091727)
tissue: skin psoriatic uninvolveddisease stat. (skin)		SRR039621(GSM531984)
HBV(+) HCC Tissue Sample 2. (liver)		SRR039625(GSM531988)
HBV(-) HCV(-) HCC Tissue Sample. (liver)		SRR189787SRR039190(GSM494809)
PBMCs were isolated by ficoll gradient from t. (blood)		SRR330890(SRX091728)
tissue: skin psoriatic uninvolveddisease stat. (skin)		SRR039192(GSM494811)
K562 cell line is derived from a CML patient . (cell line)		SRR033721(GSM497066)
Ly3 cell line (Ly3). (B cell)		SRR189779(GSM714639)
cell line: HEK293clip variant: PAR-CLIPenzyma. (cell line)		GSM1105749AGO2(GSM1105749)
small RNA sequencing data. (ago2 hela)		SRR037941(GSM510479)
293DroshaTN. (cell line)		SRR189786SRR039613(GSM531976)
Human Normal Liver Tissue Sample 3. (liver)		SRR039622(GSM531985)
HCV(+) Adjacent Tissue Sample. (liver)		SRR037944(GSM510482)
293DcrTN_cand5. (cell line)		SRR330916(SRX091754)
tissue: normal skindisease state: normal. (skin)		SRR330886(SRX091724)
tissue: skin psoriatic uninvolveddisease stat. (skin)		SRR060981(GSM569185)
Human centroblast [09-001]. (cell line)		DRR001489(DRX001043)
"Hela short nuclear cell fraction, control". (hela)		SRR330872(SRX091710)
tissue: skin psoriatic involveddisease state:. (skin)		SRR330880(SRX091718)
tissue: skin psoriatic involveddisease state:. (skin)		SRR330912(SRX091750)
tissue: normal skindisease state: normal. (skin)		SRR060983(GSM569187)
Human pre-germinal center B cell [09-001]. (cell line)		SRR330900(SRX091738)
tissue: skin psoriatic uninvolveddisease stat. (skin)		DRR000555(DRX000313)
"THP-1 whole cell RNA, no treatment". (cell line)		GSM450607(GSM450607)
miRNA sequencing raw reads from post-mortem s. (brain)		SRR553572(SRX182778)
source: Frontal Cortex. (Frontal Cortex)		SRR040028(GSM532913)
G026N. (cervix)		SRR330863(SRX091701)
tissue: skin psoriatic involveddisease state:. (skin)		DRR000556(DRX000314)
"THP-1 whole cell RNA, after 3 day treatment . (cell line)		DRR000558(DRX000316)
"THP-1 whole cell RNA, after 3 day treatment . (cell line)		SRR060984(GSM569188)
Human plasma cell [09-001]. (cell line)		SRR330887(SRX091725)
tissue: skin psoriatic uninvolveddisease stat. (skin)		SRR330896(SRX091734)
tissue: skin psoriatic uninvolveddisease stat. (skin)		DRR000559(DRX000317)
"THP-1 whole cell RNA, no treatment". (cell line)		SRR553576(SRX182782)
source: Testis. (testes)		SRR038857(GSM458540)
D20. (cell line)		SRR330877(SRX091715)
tissue: skin psoriatic involveddisease state:. (skin)		SRR330894(SRX091732)
tissue: skin psoriatic uninvolveddisease stat. (skin)		SRR107296(GSM677703)
18-30nt fraction of small RNA. (cell line)		SRR326282(GSM769512)
"Dicer mRNA was knocked down using siDicer, t. (cell line)		SRR038863(GSM458546)
MM603. (cell line)		SRR207116(GSM721078)
Nuclear RNA. (cell line)		SRR330866(SRX091704)
tissue: skin psoriatic involveddisease state:. (skin)		DRR001485(DRX001039)
"Hela long total cell fraction, LNA(+)". (hela)		SRR330920(SRX091758)
tissue: normal skindisease state: normal. (skin)		SRR039623(GSM531986)
HCV(+) HCC Tissue Sample. (liver)		SRR189781(GSM714641)
cell line: HEK293clip variant: PAR-CLIPenzyma. (cell line)		SRR330867(SRX091705)
tissue: skin psoriatic involveddisease state:. (skin)		SRR330921(SRX091759)
tissue: normal skindisease state: normal. (skin)		SRR330865(SRX091703)
tissue: skin psoriatic involveddisease state:. (skin)		SRR039616(GSM531979)
HBV(+) Distal Tissue Sample 1. (liver)		SRR040018(GSM532903)
G701N. (cervix)		SRR094129(GSM651905)
small RNA(18-35nt)small RNA deep sequencing o. (uterus)		DRR000561(DRX000319)
Isolation of RNA following immunoprecipitatio. (ago2 cell line)		SRR330879(SRX091717)
tissue: skin psoriatic involveddisease state:. (skin)		SRR107297(GSM677704)
18-30nt fraction of small RNA. (cell line)		SRR330857(SRX091695)
tissue: skin psoriatic involveddisease state:. (skin)		TAX577588(Rovira)
total RNA. (breast)		SRR330881(SRX091719)
tissue: skin psoriatic uninvolveddisease stat. (skin)		DRR000562(DRX000320)
Isolation of RNA following immunoprecipitatio. (ago3 cell line)		SRR330888(SRX091726)
tissue: skin psoriatic uninvolveddisease stat. (skin)		SRR342894(SRX096790)
small RNA seq of Right atrial tissue. (heart)		SRR330906(SRX091744)
tissue: normal skindisease state: normal. (skin)		SRR191590(GSM715700)
48genomic small RNA (size selected RNA from t. (breast)		SRR191633(GSM715743)
85genomic small RNA (size selected RNA from t. (breast)		SRR191465(GSM715575)
113genomic small RNA (size selected RNA from . (breast)		SRR342901(SRX096797)
small RNA seq of Left atrial tissue. (heart)		SRR330903(SRX091741)
tissue: skin psoriatic uninvolveddisease stat. (skin)		SRR326279(GSM769509)
cytoplasmic fraction was isolated using PARIS. (cell line)		SRR191492(GSM715602)
154genomic small RNA (size selected RNA from . (breast)		SRR033724(GSM497069)
L428 cell line (L428). (B cell)		GSM1105753INPUT(GSM1105753)
small RNA sequencing data. (hela)		SRR191425(GSM715535)
141genomic small RNA (size selected RNA from . (breast)		GSM416733(GSM416733)
HEK293. (cell line)		SRR330923(SRX091761)
tissue: normal skindisease state: normal. (skin)		SRR330904(SRX091742)
tissue: normal skindisease state: normal. (skin)		SRR314796(SRX084354)
"Total RNA, fractionated (15-30nt)". (cell line)		SRR189785SRR029128(GSM416757)
H520. (cell line)		SRR037931(GSM510469)
293GFP. (cell line)		SRR060982(GSM569186)
Human centrocyte [09-001]. (cell line)		SRR039636(GSM518473)
THP1_cyto_sRNAs. (cell line)		SRR330884(SRX091722)
tissue: skin psoriatic uninvolveddisease stat. (skin)		GSM532890(GSM532890)
G576T. (cervix)		TAX577741(Rovira)
total RNA. (breast)		SRR330917(SRX091755)
tissue: normal skindisease state: normal. (skin)		SRR038861(GSM458544)
MM466. (cell line)		SRR191531(GSM715641)
134genomic small RNA (size selected RNA from . (breast)		SRR330899(SRX091737)
tissue: skin psoriatic uninvolveddisease stat. (skin)		SRR330861(SRX091699)
tissue: skin psoriatic involveddisease state:. (skin)		SRR038859(GSM458542)
MM386. (cell line)		SRR330901(SRX091739)
tissue: skin psoriatic uninvolveddisease stat. (skin)		SRR191627(GSM715737)
45genomic small RNA (size selected RNA from t. (breast)		DRR001486(DRX001040)
"Hela long cytoplasmic cell fraction, LNA(+)". (hela)		SRR390723(GSM850202)
total small RNA. (cell line)		SRR039635(GSM518472)
THP1_nuc_sRNAs. (cell line)		GSM956925Ago2D5(GSM956925)
"cell line: HEK293 cell linepassages: 15-20ip. (ago2 cell line)		SRR342900(SRX096796)
small RNA seq of Right atrial tissue. (heart)		GSM956925AGO2Paz8(GSM956925)
"cell line: HEK293 cell linepassages: 15-20ip. (ago2 cell line)		TAX577579(Rovira)
total RNA. (breast)		GSM450602(GSM450602)
miRNA sequencing raw reads from post-mortem s. (brain)		SRR037934(GSM510472)
293cand4_rep3. (cell line)		SRR060169(GSM565979)
5-8F_cytoplasm. (cell line)		SRR330869(SRX091707)
tissue: skin psoriatic involveddisease state:. (skin)		SRR191625(GSM715735)
32genomic small RNA (size selected RNA from t. (breast)		SRR033728(GSM497073)
MALT (MALT413). (B cell)		SRR029131(GSM416760)
MCF7. (cell line)		SRR060986(GSM569190)
Human memory B cell [09-001]. (cell line)		SRR038856(GSM458539)
D11. (cell line)		SRR038862(GSM458545)
MM472. (cell line)		SRR039619(GSM531982)
HBV(+) HCC Tissue Sample 1. (liver)		SRR326280(GSM769510)
total cell content of unperturbed cells was s. (cell line)		GSM956925Paz8D5(GSM956925)
"cell line: HEK293 cell linepassages: 15-20ip. (cell line)		SRR363674(GSM830251)
cell type: human foreskin fibroblasts (HFF)tr. (fibroblast)		TAX577745(Rovira)
total RNA. (breast)		SRR033729(GSM497074)
splenic MZL (Splenic414). (B cell)		SRR553574(SRX182780)
source: Heart. (Heart)		SRR330859(SRX091697)
tissue: skin psoriatic involveddisease state:. (skin)
................................................................................................................................................................................AGCTCTGTGGGGATTTGGTTGC......................................................................................................... 221.000.00-------------------------------------1.00-----------------------------------------------------------------------------------------------------------
................................CACTGTAGAGAACCTCTC............................................................................................................................................................................................................................................................. 181.000.00--------------------------------------------------------------------------------------------------------1.00----------------------------------------
...................................................................CTGTACTTCCCCCTATTAG......................................................................................................................................................................................................................... 191.000.00-------------------------------------------------------------------------------------------------------------------------------1.00-----------------
.............................................................AACTTTCTGTACTTCCCCCG.............................................................................................................................................................................................................................. 201.000.00-------------------------------------------------------------------------------1.00-----------------------------------------------------------------
................................................................................................................................................................................................CTGAACGCCTATCCC................................................................................................ 1511.001.00-----------------------------------------1.00-------------------------------------------------------------------------------------------------------
............CAGTGTGAGAACCTCGTA................................................................................................................................................................................................................................................................................. 181.000.00-1.00-----------------------------------------------------------------------------------------------------------------------------------------------
.....................................................................................................................................................................................................................................CATCTTCCCTGTTCCTTG........................................................ 181.000.00--------------------------------------------------------------------------------------------------------------1.00----------------------------------
...........................................................................................................................................................................................................................GGAACAGGGAAGATGACCAAAGACC........................................................... 2511.001.00---------------------------------------------------------------------1.00---------------------------------------------------------------------------