ID: uc002gps.1_intron_15_0_chr17_16102034_r.3p
GENE: (1)
chr17:16101984-16102233-


(1)
AGO2.ip 		(3)
B-CELL 		(1)
BREAST 		(11)
CELL-LINE 		(3)
HEART 		(2)
HELA 		(2)
LIVER 		(1)
OTHER 		(1)
SKIN 		(1)
XRN.ip

Sense strand
CCTGGGTTAAAATCTTTTTTTTTGCCTCTTCATTCCATTTATAGCTTTATTTATTTGGGATATCTGAGTTGGGAGGAGAGTGCAGAGATAGATAACTTAAAGCATGTTTTAGGACAGCAGATCAGAATTAGTTGGAAAACTTTTACAAAATGCATGAATGTTCATATAGTGAAATACTCTTTTTTTTTTTTTTTTGACAGAGTTTCACTCTTGTTGCCCAGGCTGGAGTGCAATGGCACGATCTCGGCTC
...............................................................................................................((((((((..........((((....)))).........))).....))))).....((.(((..................))).))....................................................
............................................................................................................109........................................................................................200................................................
SizePerfect hitTotal NormPerfect NormSRR189776(GSM714636)
cell line: HEK293clip variant: CLIPenzymatic . (cell line)		SRR189775(GSM714635)
cell line: HEK293clip variant: CLIPenzymatic . (cell line)		SRR189777(GSM714637)
cell line: HEK293clip variant: PAR-CLIPenzyma. (cell line)		SRR189778(GSM714638)
cell line: HEK293clip variant: PAR-CLIPenzyma. (cell line)		SRR189780(GSM714640)
cell line: HEK293clip variant: PAR-CLIPenzyma. (cell line)		SRR189781(GSM714641)
cell line: HEK293clip variant: PAR-CLIPenzyma. (cell line)		SRR189779(GSM714639)
cell line: HEK293clip variant: PAR-CLIPenzyma. (cell line)		SRR039192(GSM494811)
K562 cell line is derived from a CML patient . (cell line)		DRR001488(DRX001042)
"Hela short nuclear cell fraction, LNA(+)". (hela)		SRR039621(GSM531984)
HBV(+) HCC Tissue Sample 2. (liver)		DRR000555(DRX000313)
"THP-1 whole cell RNA, no treatment". (cell line)		SRR553572(SRX182778)
source: Frontal Cortex. (Frontal Cortex)		SRR033717(GSM497062)
Mentle Cell Lymphoma (MCL112). (B cell)		GSM1105749AGO2(GSM1105749)
small RNA sequencing data. (ago2 hela)		SRR033732(GSM497077)
bjab cell line (bjab103). (B cell)		SRR207115(GSM721077)
XRN1&2 knockdown. (XRN1/XRN2 cell line)		SRR015360(GSM380325)
Plasma B cells (PC137). (B cell)		SRR342897(SRX096793)
small RNA seq of Left atrial tissue. (heart)		SRR039623(GSM531986)
HCV(+) HCC Tissue Sample. (liver)		TAX577743(Rovira)
total RNA. (breast)		SRR330886(SRX091724)
tissue: skin psoriatic uninvolveddisease stat. (skin)		SRR342900(SRX096796)
small RNA seq of Right atrial tissue. (heart)		SRR107296(GSM677703)
18-30nt fraction of small RNA. (cell line)		SRR342896(SRX096792)
small RNA seq of Right atrial tissue. (heart)
.............................................................................................................................................................................ATACTCTTTTTTTTTTTTTTTGG......................................................23193.000.00102.0070.008.0012.00-1.00------------------
.............................................................................................................................................................................ATACTCTTTTTTTTTTTTTTTTCTTG...................................................2668.000.0011.006.0020.0026.003.002.00------------------
.............................................................................................................................................................................ATACTCTTTTTTTTTTTTTTCTTG.....................................................2463.000.003.009.0027.0021.002.001.00------------------
.............................................................................................................................................................................ATACTCTTTTTTTTTTTTTTTCTTG....................................................2550.000.008.006.0015.0016.003.002.00------------------
.............................................................................................................................................................................ATACTCTTTTTTTTTTTTTTTTCTG....................................................2543.000.007.004.0012.0016.00-4.00------------------
.............................................................................................................................................................................ATACTCTTTTTTTTTTTTTTTTCG.....................................................2438.000.0014.007.0010.005.00-2.00------------------
.............................................................................................................................................................................ATACTCTTTTTTTTTTTTTCG........................................................2126.000.007.005.007.005.00-2.00------------------
.............................................................................................................................................................................ATACTCTTTTTTTTTTTTCG.........................................................2015.000.004.001.006.003.00-1.00------------------
.............................................................................................................................................................................ATACTCTTTTTTTTTTTTTTTGTG.....................................................2411.000.005.004.00-2.00--------------------
.............................................................................................................................................................................ATACTCTTTTTTTTTTTTTTTAT......................................................239.000.008.001.00----------------------
.............................................................................................................................................................................ATACTCTTTTTTTTTTTTTTTGGG.....................................................249.000.004.004.00--1.00-------------------
.............................................................................................................................................................................ATACTCTTTTTTTTTTGTG..........................................................198.000.004.002.002.00---------------------
.............................................................................................................................................................................ATACTCTTTTTTTTTTTATG.........................................................208.000.003.004.00-1.00--------------------
.............................................................................................................................................................................ATACTCTTTTTTTTTTTTTGTG.......................................................228.000.002.006.00----------------------
.............................................................................................................................................................................ATACTCTTTTTTTTTTTTTGGG.......................................................227.000.003.004.00----------------------
.............................................................................................................................................................................ATACTCTTTTTTTTTTTTTTTTGTTG...................................................266.000.005.00-1.00---------------------
.............................................................................................................................................................................ATACTCTTTTTTTTTTTTTTTTATG....................................................256.000.003.002.001.00---------------------
.............................................................................................................................................................................ATACTCTTTTTTTTTTTTTTTTCGAG...................................................266.000.00----6.00-------------------
.............................................................................................................................................................................ATACTCTTTTTTTTTTTTTTTATG.....................................................245.000.002.002.001.00---------------------
.............................................................................................................................................................................ATACTCTTTTTTTTTTCG...........................................................185.000.002.002.001.00---------------------
.............................................................................................................................................................................ATACTCTTTTTTTTTTTTTTTTCCTG...................................................265.000.001.00-1.002.001.00-------------------
.............................................................................................................................................................................ATACTCTTTTTTTTTTTTCCTG.......................................................225.000.001.00-1.003.00--------------------
.............................................................................................................................................................................ATACTCTTTTTTTTTTTGGG.........................................................205.000.004.001.00----------------------
.............................................................................................................................................................................ATACTCTTTTTTTTTTTTTTTGTGG....................................................255.000.004.001.00----------------------
.............................................................................................................................................................................ATACTCTTTTTTTTTTTTGTG........................................................214.000.002.00-1.001.00--------------------
.............................................................................................................................................................................ATACTCTTTTTTTTTTTTCTCG.......................................................224.000.00-1.002.001.00--------------------
.............................................................................................................................................................................ATACTCTTTTTTTTTTTTTCTA.......................................................224.000.00-2.002.00---------------------
.............................................................................................................................................................................ATACTCTTTTTTTTTTTTTTTAAT.....................................................244.000.002.00-2.00---------------------
.............................................................................................................................................................................ATACTCTTTTTTTTTTTTTGT........................................................214.000.002.001.00-1.00--------------------
.............................................................................................................................................................................ATACTCTTTTTTTTTTTTTCGG.......................................................224.000.00-3.001.00---------------------
.............................................................................................................................................................................ATACTCTTTTTTTTTTTTTTTTATTG...................................................264.000.002.002.00----------------------
.............................................................................................................................................................................ATACTCTTTTTTTTTTTTTTCTAG.....................................................244.000.00--1.003.00--------------------
.............................................................................................................................................................................ATACTCTTTTTTTTTTTTTTTTGGAG...................................................264.000.001.00---2.00-1.00-----------------
.............................................................................................................................................................................ATACTCTTTTTTTTTTTTTTTTCCCG...................................................263.000.001.00--2.00--------------------
.............................................................................................................................................................................ATACTCTTTTTTTTTTTTTTCCG......................................................233.000.002.00-1.00---------------------
.............................................................................................................................................................................ATACTCTTTTTTTTTGTTG..........................................................193.000.00-2.00-1.00--------------------
.............................................................................................................................................................................ATACTCTTTTTTTTTTTGTG.........................................................203.000.001.002.00----------------------
.............................................................................................................................................................................ATACTCTTTTTTTTTTTTTTTTAAT....................................................253.000.002.001.00----------------------
.............................................................................................................................................................................ATACTCTTTTTTTTTTTTTTTCTCG....................................................253.000.00---2.00-1.00------------------
.............................................................................................................................................................................ATACTCTTTTTTTTTTTTTTTCAG.....................................................243.000.00-1.001.00-1.00-------------------
.............................................................................................................................................................................ATACTCTTTTTTTTTTTTTTTATTG....................................................253.000.00-1.001.001.00--------------------
.............................................................................................................................................................................ATACTCTTTTTTTTTTTTTTATTG.....................................................243.000.002.001.00----------------------
.............................................................................................................................................................................ATACTCTTTTTTTTTTTTTTTCTCT....................................................253.000.00---1.001.001.00------------------
......................................................................................................................................................................................................................TGCCCAGGCTGGAGTGCAATGGCACGCAG.......293.000.00----2.00-1.00-----------------
.............................................................................................................................................................................ATACTCTTTTTTTTTTTTTTCAG......................................................233.000.001.001.00--1.00-------------------
.............................................................................................................................................................................ATACTCTTTTTTTTTTTTTCTAG......................................................232.000.001.00--1.00--------------------
............................................................................................................................................................................AATACTCTTTTTTTTTTTTTTTTAT.....................................................252.000.001.001.00----------------------
..................................................................................................................................................................................................................................AGTGCAATGGCACGATCTCGGAA.232.000.00----------------1.00--1.00----
.............................................................................................................................................................................ATACTCTTTTTTTTTTTTTTATTT.....................................................242.000.001.00-1.00---------------------
.............................................................................................................................................................................ATACTCTTTTTTTTTTTTTTTTCTGG...................................................262.000.00-2.00----------------------
.............................................................................................................................................................................ATACTCTTTTTTTTTTTTTTTATTT....................................................252.000.00-2.00----------------------
.............................................................................................................................................................................ATACTCTTTTTTTTTTTTTCGAG......................................................232.000.00----1.00-1.00-----------------
.............................................................................................................................................................................ATACTCTTTTTTTTTTTAC..........................................................192.000.001.00---1.00-------------------
.............................................................................................................................................................................ATACTCTTTTTTTTTTTTTTTATT.....................................................242.000.001.00--1.00--------------------
.................................................................................................................................................................................TCTTTTTTTTTTTTTTTTGACGGGC................................................252.000.00----2.00-------------------
.............................................................................................................................................................................ATACTCTTTTTTTTTTTTTGTGG......................................................232.000.001.00--1.00--------------------
.............................................................................................................................................................................ATACTCTTTTTTTTTTTTTTTAAAG....................................................252.000.00-1.001.00---------------------
.............................................................................................................................................................................ATACTCTTTTTTTTTTTTTTTTCTC....................................................252.000.001.00-1.00---------------------
.............................................................................................................................................................................ATACTCTTTTTTTTTTTTTGGGG......................................................232.000.00-1.00--1.00-------------------
.............................................................................................................................................................................ATACTCTTTTTTTTTTTTTCTCG......................................................232.000.001.00-1.00---------------------
.............................................................................................................................................................................ATACTCTTTTTTTTTTTTTTCTGG.....................................................242.000.00--1.001.00--------------------
.............................................................................................................................................................................ATACTCTTTTTTTTTTCCG..........................................................192.000.001.001.00----------------------
.............................................................................................................................................................................ATACTCTTTTTTTTTTTTTTTATTA....................................................252.000.002.00-----------------------
.............................................................................................................................................................................ATACTCTTTTTTTTTTTTTTTTAGG....................................................252.000.002.00-----------------------
.............................................................................................................................................................................ATACTCTTTTTTTTTTTTTTTTGAAA...................................................262.000.00------2.00-----------------
.............................................................................................................................................................................ATACTCTTTTTTTTTTTTTTTCCTG....................................................252.000.00--2.00---------------------
.............................................................................................................................................................................ATACTCTTTTTTTTTTTTTCCTG......................................................232.000.00--2.00---------------------
...............................................................................................................................................................................ACTCTTTTTTTTTTTTTTATAG.....................................................222.000.001.001.00----------------------
.............................................................................................................................................................................ATACTCTTTTTTTTTTTTTTCTA......................................................232.000.00---2.00--------------------
............................................................................................................................................................................AATACTCTTTTTTTTTTTTTTTTAG.....................................................252.000.001.001.00----------------------
.............................................................................................................................................................................ATACTCTTTTTTTTTTTTTTTGTTG....................................................252.000.001.00--1.00--------------------
.............................................................................................................................................................................ATACTCTTTTTTTTTTTTGTGG.......................................................222.000.002.00-----------------------
.............................................................................................................................................................................ATACTCTTTTTTTTTTTTTTCCTG.....................................................242.000.00---1.00-1.00------------------
.............................................................................................................................................................................ATACTCTTTTTTTTTTTTTTATT......................................................232.000.00-2.00----------------------
.............................................................................................................................................................................ATACTCTTTTTTTTTTTTGGTG.......................................................222.000.001.00-----1.00-----------------
............................................................................................................................................................................AATACTCTTTTTTTTTTTAAG.........................................................212.000.001.00--1.00--------------------
.............................................................................................................................................................................ATACTCTTTTTTTTTTTTTTTTCTCT...................................................262.000.00----2.00-------------------
......................................................................................................................................................................................................................................CAATGGCACGATCTCGGAT.191.000.00-------------1.00----------
.............................................................................................................................................................................ATACTCTTTTTTTTTTTTTTTCTA.....................................................241.000.00---1.00--------------------
.............................................................................................................................................................................ATACTCTTTTTTTTTTTTTTTCC......................................................231.000.00----1.00-------------------
............................................................................................................................................................................AATACTCTTTTTTTTTTTTTTTTG......................................................2481.001.000.25-0.380.38--------------------
.............................................................................................................................................................................ATACTCTTTTTTTTTTTTTTTTCGG....................................................251.000.001.00-----------------------
.............................................................................................................................................................................ATACTCTTTTTTTTTTTACAG........................................................211.000.001.00-----------------------
.............................................................................................................................................................................ATACTCTTTTTTTTTTTTGGGG.......................................................221.000.001.00-----------------------
.............................................................................................................................................................................ATACTCTTTTTTTTTTTTTTTATC.....................................................241.000.00--1.00---------------------
.............................................................................................................................................................................ATACTCTTTTTTTTTTTTTTCTTA.....................................................241.000.00--1.00---------------------
.............................................................................................................................................................................ATACTCTTTTTTTTTTTTTCCG.......................................................221.000.00--1.00---------------------
...............................................................................................................................................................................ACTCTTTTTTTTTTTTTTTTGATGG..................................................251.000.00----1.00-------------------
.............................................................................................................................................................................ATACTCTTTTTTTTTTTTTTTTATAT...................................................261.000.001.00-----------------------
.............................................................................................................................................................................ATACTCTTTTTTTTTTTTTGCT.......................................................221.000.001.00-----------------------
.............................................................................................................................................................................ATACTCTTTTTTTTTTTTTTTTGGGG...................................................261.000.00----1.00-------------------
.............................................................................................................................................................................ATACTCTTTTTTTTTTTGTGG........................................................211.000.001.00-----------------------
.............................................................................................................................................................................ATACTCTTTTTTTTTTTTTTTCTAA....................................................251.000.001.00-----------------------
.............................................................................................................................................................................ATACTCTTTTTTTTTTTTTTTGTCG....................................................251.000.001.00-----------------------
.............................................................................................................................................................................ATACTCTTTTTTTTTTTTTTTTGTCG...................................................261.000.001.00-----------------------
.............................................................................................................................................................................ATACTCTTTTTTTTTTTTTTCCTA.....................................................241.000.00----1.00-------------------
.............................................................................................................................................................................ATACTCTTTTTTTTTTTTTTTACTT....................................................251.000.00--1.00---------------------
............................................................................................................................................................................AATACTCTTTTTTTTTTCTAG.........................................................211.000.00---1.00--------------------
.............................................................................................................................................................................ATACTCTTTTTTTTTTTTTTTTAC.....................................................241.000.001.00-----------------------
.............................................................................................................................................................................ATACTCTTTTTTTTTTTTCCCG.......................................................221.000.00--1.00---------------------
...................................................................................AGAGATAGATAACTTAAAGCATGTTTCAG..........................................................................................................................................291.000.00-----1.00------------------
.............................................................................................................................................................................ATACTCTTTTTTTTTTTGGGG........................................................211.000.001.00-----------------------
.............................................................................................................................................................................ATACTCTTTTTTTTTTTACA.........................................................201.000.00-1.00----------------------
.............................................................................................................................................................................ATACTCTTTTTTTTTGCAC..........................................................191.000.00-----1.00------------------
.............................................................................................................................................................................ATACTCTTTTTTTTTTTTTTTCTTA....................................................251.000.00-1.00----------------------
............................................................................................................................................................................AATACTCTTTTTTTTTTTTTTCGGG.....................................................251.000.00----1.00-------------------
...............................................................................................................................................................................ACTCTTTTTTTTTTTTTTTTGACC...................................................241.000.00-----1.00------------------
.............................................................................................................................................................................ATACTCTTTTTTTTTTTTTTTTGTTT...................................................261.000.00----1.00-------------------
............................................................................................................................................................................AATACTCTTTTTTTTTTTTTAG........................................................221.000.001.00-----------------------
.............................................................................................................................................................................ATACTCTTTTTTTTTTTTTCGGG......................................................231.000.00-1.00----------------------
.......................................................................................................................................................................................TTTTTTTTTTTTGACAGAGGCG.............................................221.000.00------1.00-----------------
.............................................................................................................................................................................ATACTCTTTTTTTTTTTTTCGTC......................................................231.000.00-----1.00------------------
.................................................................................................................................................................................................................CTTGTTGCCCAGGCTGGAGTGCTCTG...............261.000.00-----------------1.00------
.............................................................................................................................................................................ATACTCTTTTTTTTTTTTTTTTCTAG...................................................261.000.00--1.00---------------------
.............................................................................................................................................................................ATACTCTTTTTTTTTTTTCA.........................................................201.000.001.00-----------------------
.............................................................................................................................................................................ATACTCTTTTTTTTTTTTTTTTGTAG...................................................261.000.001.00-----------------------
.............................................................................................................................................................................ATACTCTTTTTTTTTTTTTTTGGC.....................................................241.000.00------1.00-----------------
.............................................................................................................................................................................ATACTCTTTTTTTTTTTTTTTTGTCAC..................................................271.000.00-1.00----------------------
.............................................................................................................................................................................ATACTCTTTTTTTTTTTTTTTCGTG....................................................251.000.001.00-----------------------
.............................................................................................................................................................................ATACTCTTTTTTTTTTCTAG.........................................................201.000.00-1.00----------------------
.............................................................................................................................................................................ATACTCTTTTTTTTTTTTCGAG.......................................................221.000.00----1.00-------------------
...................................................................................................................................................................................TTTTTTTTTTTTTTTTGACAGAGCGGG............................................271.000.00------1.00-----------------
.............................................................................................................................................................................ATACTCTTTTTTTTTTTGTCG........................................................211.000.00-1.00----------------------
.............................................................................................................................................................................ATACTCTTTTTTTTTTTTTTCATC.....................................................241.000.00-1.00----------------------
.................................................................................................................ACAGCAGATCAGAATGGG.......................................................................................................................181.000.00---------1.00--------------
.............................................................................................................................................................................ATACTCTTTTTTTTTTTTTTTTAGC....................................................251.000.00-1.00----------------------
...........ATCTTTTTTTTTGCCGCCG............................................................................................................................................................................................................................191.000.00----1.00-------------------
.............................................................................................................................................................................ATACTCTTTTTTTTTTTTTTCTC......................................................231.000.00-1.00----------------------
.............................................................................................................................................................................ATACTCTTTTTTTTTTTTTTCTAT.....................................................241.000.00---1.00--------------------
...............................................................................................................................................................................ACTCTTTTTTTTTTTTTTATGG.....................................................221.000.00--1.00---------------------
.............................................................................................................................................................................ATACTCTTTTTTTTTTTTTTTCTAC....................................................251.000.00-----1.00------------------
.............................................................................................................................................................................ATACTCTTTTTTTTTTTTCGG........................................................211.000.00-1.00----------------------
........................................................................................................................................................................................................AGTTTCACTCTTGTTGCCCAGGCGAAG.......................271.000.00----1.00-------------------
.............................................................................................................................................................................ATACTCTTTTTTTTTTTTGCGG.......................................................221.000.00-1.00----------------------
.............................................................................................................................................................................ATACTCTTTTTTTTTTTTCTGG.......................................................221.000.00---1.00--------------------
.............................................................................................................................................................................ATACTCTTTTTTTTTTCTCG.........................................................201.000.001.00-----------------------
.............................................................................................................................................................................ATACTCTTTTTTTTTTCGAG.........................................................201.000.00----1.00-------------------
.............................................................................................................................................................................ATACTCTTTTTTTTTTTTTTAGC......................................................231.000.00------1.00-----------------
..............................................................................................................................................................................TACTCTTTTTTTTTTTTTTTTGGGT...................................................251.000.00----1.00-------------------
...............................................................................................................................................................................ACTCTTTTTTTTTTTTTTTTGAATA..................................................251.000.00---1.00--------------------
.............................................................................................................................................................................ATACTCTTTTTTTTTTTTTTTTCAAG...................................................261.000.00--1.00---------------------
.............................................................................................................................................................................ATACTCTTTTTTTTTTTTTGTC.......................................................221.000.001.00-----------------------
.............................................................................................................................................................................ATACTCTTTTTTTTTTTTTTTTATGG...................................................261.000.001.00-----------------------
.............................................................................................................................................................................ATACTCTTTTTTTTTTTTTTTTGAC....................................................2511.001.00----1.00-------------------
.............................................................................................................................................................................ATACTCTTTTTTTTTTTACTG........................................................211.000.00--1.00---------------------
....................................................................................................................................................................................................................................TGCAATGGCACGATCTCGGCTAAAA251.000.00------------1.00-----------
.............................................................................................................................................................................ATACTCTTTTTTTTTTTTCACT.......................................................221.000.00---1.00--------------------
.............................................................................................................................................................................ATACTCTTTTTTTTTGGG...........................................................181.000.001.00-----------------------
............................................................................................................................................................................AATACTCTTTTTTTTTTTTTTTCTTG....................................................261.000.00--1.00---------------------
..............................................................................................................................................................................TACTCTTTTTTTTTTTTTTTCCCG....................................................241.000.00----1.00-------------------
.............................................................................................................................................................................ATACTCTTTTTTTTTTTTCGGG.......................................................221.000.00-1.00----------------------
.............................................................................................................................................................................ATACTCTTTTTTTTTTTTTTTCCTT....................................................251.000.00--1.00---------------------
.................................................................................................................................................................................TCTTTTTTTTTTTTTTTTGACAGAGCCG.............................................281.000.00----1.00-------------------
.............................................................................................................................................................................ATACTCTTTTTTTTTTTTTTTTCAAT...................................................261.000.00-1.00----------------------
.....................................................................................................................................................................................................................................GCAATGGCACGATCTCGGCTCTAGA251.000.00---------------1.00--------
..........................................................................................................................................................................................................................................GGCACGATCTCGGCTAAAG191.000.00------------------1.00-----
..............................................................................................................................................................................TACTCTTTTTTTTTTTTTTTTGTGGG..................................................261.000.00----1.00-------------------
.............................................................................................................................................................................ATACTCTTTTTTTTTTTTTTTTAATT...................................................261.000.00--1.00---------------------
............................................................................................................................................................................AATACTCTTTTTTTTTTTTTTCTTG.....................................................251.000.00---1.00--------------------
.........AAATCTTTTTTTTTGGTTA..............................................................................................................................................................................................................................191.000.00----1.00-------------------
.............................................................................................................................................................................ATACTCTTTTTTTTTTTTTTTTGTTAT..................................................271.000.001.00-----------------------
.............................................................................................................................................................................ATACTCTTTTTTTTTTTTTTTGAC.....................................................241.000.00----1.00-------------------
.................................................................................................................................................................................TCTTTTTTTTTTTTTTTTGACAGGGCC..............................................271.000.00----1.00-------------------
..................................................................................................................................................................................................................................AGTGCAATGGCACGATCTCGGCTAT251.000.00-------1.00----------------
.............................................................................................................................................................................ATACTCTTTTTTTTTTTTTTACAT.....................................................241.000.00----1.00-------------------
.............................................................................................................................................................................ATACTCTTTTTTTTTTTATCA........................................................211.000.001.00-----------------------
.............................................................................................................................................................................ATACTCTTTTTTTTTTTTTTTTCCT....................................................251.000.00---1.00--------------------
.............................................................................................................................................................................ATACTCTTTTTTTTTTTTTTTTATAA...................................................261.000.00-1.00----------------------
..............................................................................................................................................................................TACTCTTTTTTTTTTTTTTCCAC.....................................................231.000.00----1.00-------------------
............................................................................................................................................................................................................TCACTCTTGTTGCCCAGGCGGAC.......................231.000.00----1.00-------------------
.............................................................................................................................................................................ATACTCTTTTTTTTTTTTTTTTGTC....................................................251.000.001.00-----------------------
.............................................................................................................................................................................ATACTCTTTTTTTTTTTTTTTCTAT....................................................251.000.00------1.00-----------------
.............................................................................................................................................................................ATACTCTTTTTTTTTTTTTTTTATAG...................................................261.000.001.00-----------------------
.............................................................................................................................................................................ATACTCTTTTTTTTTTTTTTTTGTCGA..................................................271.000.00--1.00---------------------
.............................................................................................................................................................................ATACTCTTTTTTTTTTTTTGGAG......................................................231.000.001.00-----------------------
.............................................................................................................................................................................ATACTCTTTTTTTTTTTTTTCCT......................................................231.000.00-1.00----------------------
.............................................................................................................................................................................ATACTCTTTTTTTTTTTTTTTTGATAG..................................................271.000.00-----1.00------------------
.............................................................................................................................................................................ATACTCTTTTTTTTTTTTTCTAT......................................................231.000.00-1.00----------------------
.............................................................................................................................................................................ATACTCTTTTTTTTTTTTTTTAGGG....................................................251.000.00-1.00----------------------
.............................................................................................................................................................................ATACTCTTTTTTTTTTTTTTTAGG.....................................................241.000.00-1.00----------------------
..................................................TTATTTGGGATATCTGAGTTGGGAGGAGAGTG........................................................................................................................................................................3211.001.00-----------1.00------------
.............................................................................................................................................................................ATACTCTTTTTTTTTTTTTTTTCCTT...................................................261.000.00---1.00--------------------
.............................................................................................................................................................................ATACTCTTTTTTTTTTTTTTTCCG.....................................................241.000.00--1.00---------------------
............................................................................................................................................................................AATACTCTTTTTTTTTTTTTTCTAG.....................................................251.000.00--1.00---------------------
.............................................................................................................................................................................ATACTCTTTTTTTTTTTATTC........................................................211.000.00--1.00---------------------
.............................................................................................................................................................................ATACTCTTTTTTTTTTTTCCG........................................................211.000.00--1.00---------------------
..............................................................................................................................................................................TACTCTTTTTTTTTTTTTTAACG.....................................................231.000.00---1.00--------------------
.............................................................................................................................................................................ATACTCTTTTTTTTTTTTTTTTACAG...................................................261.000.00----1.00-------------------
.............................................................................................................................................................................ATACTCTTTTTTTTTTTTTTTTCTA....................................................251.000.00--1.00---------------------
.............................................................................................................................................................................ATACTCTTTTTTTTTTTTTTCAAG.....................................................241.000.00--1.00---------------------
.............................................................................................................................................................................ATACTCTTTTTTTTTTTTTGGGA......................................................231.000.00-----1.00------------------
.............................................................................................................................................................................ATACTCTTTTTTTTTTTTCAG........................................................211.000.001.00-----------------------
.............................................................................................................................................................................ATACTCTTTTTTTTTTTTTTTTGCG....................................................251.000.001.00-----------------------
.............................................................................................................................................................................ATACTCTTTTTTTTTTTTTTTTGACT...................................................2611.001.00----1.00-------------------
...........................................................................................................................................................................................................................AGGCTGGAGTGCAATGGCACGATCGCCG...281.000.00----1.00-------------------
..................................................................................................................................................................................................................................AGTGCAATGGCACGATCTCGGATA241.000.00--------------1.00---------
.............................................................................................................................................................................ATACTCTTTTTTTTTTTTTTCCCC.....................................................241.000.00---1.00--------------------
.............................................................................................................................................................................ATACTCTTTTTTTTTTTTGGGC.......................................................221.000.001.00-----------------------
.............................................................................................................................................................................ATACTCTTTTTTTTTTTGGTG........................................................211.000.00-1.00----------------------
.............................................................................................................................................................................ATACTCTTTTTTTTTTTTCAAC.......................................................221.000.00--1.00---------------------
.............................................................................................................................................................................ATACTCTTTTTTTTTTTTTTTCAC.....................................................241.000.00-----1.00------------------
.............................................................................................................................................................................ATACTCTTTTTTTTTTTATTG........................................................211.000.00-1.00----------------------
....................................................................................................................................................................................................................................TGCAATGGCACGATCTCGGCTATAA251.000.00-------1.00----------------
.............................................................................................................................................................................ATACTCTTTTTTTTTTTTTTTTAAAC...................................................261.000.00------1.00-----------------
.............................................................................................................................................................................ATACTCTTTTTTTTTTTTTGTTT......................................................231.000.00-1.00----------------------
.............................................................................................................................................................................ATACTCTTTTTTTTTTTTTTCGG......................................................231.000.001.00-----------------------
..............................................................................................................................................................................TACTCTTTTTTTTTTTTTTTTGAC....................................................2420.500.50----0.50-------------------
.CTGGGTTAAAATCTTTTTTTTT...................................................................................................................................................................................................................................2230.330.33--------------------0.33---
...........................................................................................................................AGAATTAGTTGGAAAACTTTT..........................................................................................................2130.330.33-------0.33----------------
...........................................................................................................................................................................AAATACTCTTTTTTTTTTTTTTTTG......................................................2540.250.250.25-----------------------
.............................................................................................................TAGGACAGCAGATCAGAATTAGTTGGA..................................................................................................................2740.250.25-----------------------0.25
..........................................................................................................TTTTAGGACAGCAGATCAGAA...........................................................................................................................2140.250.25---------------------0.25--
.................................................................................................................ACAGCAGATCAGAATTAGTTGGA..................................................................................................................2340.250.25----------------------0.25-

Antisense strand
CCTGGGTTAAAATCTTTTTTTTTGCCTCTTCATTCCATTTATAGCTTTATTTATTTGGGATATCTGAGTTGGGAGGAGAGTGCAGAGATAGATAACTTAAAGCATGTTTTAGGACAGCAGATCAGAATTAGTTGGAAAACTTTTACAAAATGCATGAATGTTCATATAGTGAAATACTCTTTTTTTTTTTTTTTTGACAGAGTTTCACTCTTGTTGCCCAGGCTGGAGTGCAATGGCACGATCTCGGCTC
...............................................................................................................((((((((..........((((....)))).........))).....))))).....((.(((..................))).))....................................................
............................................................................................................109........................................................................................200................................................
SizePerfect hitTotal NormPerfect NormSRR189776(GSM714636)
cell line: HEK293clip variant: CLIPenzymatic . (cell line)		SRR189775(GSM714635)
cell line: HEK293clip variant: CLIPenzymatic . (cell line)		SRR189777(GSM714637)
cell line: HEK293clip variant: PAR-CLIPenzyma. (cell line)		SRR189778(GSM714638)
cell line: HEK293clip variant: PAR-CLIPenzyma. (cell line)		SRR189780(GSM714640)
cell line: HEK293clip variant: PAR-CLIPenzyma. (cell line)		SRR189781(GSM714641)
cell line: HEK293clip variant: PAR-CLIPenzyma. (cell line)		SRR189779(GSM714639)
cell line: HEK293clip variant: PAR-CLIPenzyma. (cell line)		SRR039192(GSM494811)
K562 cell line is derived from a CML patient . (cell line)		DRR001488(DRX001042)
"Hela short nuclear cell fraction, LNA(+)". (hela)		SRR039621(GSM531984)
HBV(+) HCC Tissue Sample 2. (liver)		DRR000555(DRX000313)
"THP-1 whole cell RNA, no treatment". (cell line)		SRR553572(SRX182778)
source: Frontal Cortex. (Frontal Cortex)		SRR033717(GSM497062)
Mentle Cell Lymphoma (MCL112). (B cell)		GSM1105749AGO2(GSM1105749)
small RNA sequencing data. (ago2 hela)		SRR033732(GSM497077)
bjab cell line (bjab103). (B cell)		SRR207115(GSM721077)
XRN1&2 knockdown. (XRN1/XRN2 cell line)		SRR015360(GSM380325)
Plasma B cells (PC137). (B cell)		SRR342897(SRX096793)
small RNA seq of Left atrial tissue. (heart)		SRR039623(GSM531986)
HCV(+) HCC Tissue Sample. (liver)		TAX577743(Rovira)
total RNA. (breast)		SRR330886(SRX091724)
tissue: skin psoriatic uninvolveddisease stat. (skin)		SRR342900(SRX096796)
small RNA seq of Right atrial tissue. (heart)		SRR107296(GSM677703)
18-30nt fraction of small RNA. (cell line)		SRR342896(SRX096792)
small RNA seq of Right atrial tissue. (heart)
............................................................................................................................................................................................................................GGCTGGAGTGCAATGGCACGATGGAC.... 264.000.00----3.00-1.00-----------------
............................................................................................................................................................................................................................GGCTGGAGTGCAATGGCACGATCTGGTG.. 282.000.00----2.00-------------------
............................................................................................................................................................................................................................GGCTGGAGTGCAATGGCACGATAGGC.... 262.000.00----1.00-1.00-----------------
..........................................................................................................................................................................................................................CAGGCTGGAGTGCAATGGCACGATCGAC.... 281.000.00----1.00-------------------
......................................................................................................................................................................................................AGAGTTTCACTCTTGTTGCCCAGGCTGGACCTC................... 331.000.00----1.00-------------------
............................................................................................................................................................................................................................GGCTGGAGTGCAATGGCACGATGGGT.... 261.000.00----1.00-------------------
............................................................................................................................................................................................................................GGCTGGAGTGCAATGGCACGATCTGGTC.. 281.000.00----1.00-------------------
............................................................................................................................................................................................................................GGCTGGAGTGCAATGGCACGATGGTG.... 261.000.00----1.00-------------------
..............................................................................................................................................................................AAAAAAAAAAAAAAAAGAGTA....................................................... 2101.001.00----------1.00-------------
............................................................................................................................................................................................................................GGCTGGAGTGCAATGGCACGATGAGC.... 261.000.00------1.00-----------------
.....................................................................................................................................................................................................................................GCAATGGCACGATCTCGGCTA 211.000.00-------1.00----------------
......................................................................................................................................................................................................................................CAATGGCACGATCTCGGCAGTT 221.000.00--------1.00---------------
............................................................................................................................................................................................................................GGCTGGAGTGCAATGGCACGATCTAGGC.. 281.000.00----1.00-------------------
............................................................................................................................................................................................................................GGCTGGAGTGCAATGGCACGATCTGAGC.. 281.000.00----1.00-------------------