| (2) AGO2.ip | (3) BRAIN | (2) BREAST | (9) CELL-LINE | (2) CERVIX | (1) LIVER | (2) OTHER | (2) RRP40.ip | (4) SKIN |
| TTAGAGTGGCCCATCGGTCGGTCTAGGGAGGGGAGGGTCAGCGTGGCAAGGTGTGTGTCGGGGGCAGAGGGAAGGAGGGAAGGAGTGCTGGGGAGAAGGGGCAGTAGTGTCGGGGTAGGAAGGGACAGTTGTTGGGGAGAAGAGGCAGTTGTGGAGGGAGAGGGAGCAAGGAATATTTGTGTGGGGGAGGGGGAGGAGAAGGGGCAGTTGTGACAGCTGGGGGGGAAGAGCCATTCTGAGGGGAAATTTG ......................................................((.((...((((...................))))..........(((((..((.((..........)).))..)))))........)).))........................................................................................................ ..................................................51.............................................................................................146...................................................................................................... | Size | Perfect hit | Total Norm | Perfect Norm | SRR207112(GSM721074) RRP40 knockdown. (RRP40 cell line) | SRR040036(GSM532921) G243N. (cervix) | RoviraIPAgo2(Rovira) total RNA. (ago2 breast) | SRR189784 | SRR029054(GSM402329) MCF7_smallRNAseq. (cell line) | GSM450601(GSM450601) miRNA sequencing raw reads from post-mortem s. (brain) | SRR343332(GSM796035) "KSHV (HHV8), EBV (HHV-4)". (cell line) | SRR040028(GSM532913) G026N. (cervix) | SRR553573(SRX182779) source: Cerebellum. (Cerebellum) | SRR207118(GSM721080) RRP40 knockdown. (RRP40 cell line) | SRR060984(GSM569188) Human plasma cell [09-001]. (cell line) | SRR189782 | SRR189779(GSM714639) cell line: HEK293clip variant: PAR-CLIPenzyma. (cell line) | SRR029127(GSM416756) A549. (cell line) | SRR330862(SRX091700) tissue: skin psoriatic involveddisease state:. (skin) | GSM450608(GSM450608) miRNA sequencing raw reads from post-mortem s. (brain) | GSM450602(GSM450602) miRNA sequencing raw reads from post-mortem s. (brain) | TAX577589(Rovira) total RNA. (breast) | SRR039623(GSM531986) HCV(+) HCC Tissue Sample. (liver) | SRR330890(SRX091728) tissue: skin psoriatic uninvolveddisease stat. (skin) | SRR330860(SRX091698) tissue: skin psoriatic involveddisease state:. (skin) | GSM956925Ago2PAZ(GSM956925) "cell line: HEK293 cell linepassages: 15-20ip. (ago2 cell line) | SRR189785 | SRR330912(SRX091750) tissue: normal skindisease state: normal. (skin) | SRR326279(GSM769509) cytoplasmic fraction was isolated using PARIS. (cell line) | SRR553572(SRX182778) source: Frontal Cortex. (Frontal Cortex) |
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| ...........................................................................................................................GACAGTTGTTGGGGATTGC............................................................................................................ | 19 | 52.00 | 0.00 | 52.00 | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | |
| ...........................................................................................................................GACAGTTGTTGGGGATT.............................................................................................................. | 17 | 49.00 | 0.00 | 49.00 | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | |
| ...........................................................................................................................GACAGTTGTTGGGGATTG............................................................................................................. | 18 | 17.00 | 0.00 | 16.00 | - | - | - | - | - | - | - | - | 1.00 | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | |
| ..........................................................................................................................GGACAGTTGTTGGGGTTGC............................................................................................................. | 19 | 4.00 | 0.00 | 4.00 | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | |
| ..........................................................................................................................GGACAGTTGTTGGGGATTGC............................................................................................................ | 20 | 2.00 | 0.00 | 2.00 | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | |
| ..........................................................................................................................GGACAGTTGTTGGGGTTG.............................................................................................................. | 18 | 2.00 | 0.00 | 2.00 | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | |
| ...........................................................................................................................GACAGTTGTTGGGGATTCC............................................................................................................ | 19 | 2.00 | 0.00 | 2.00 | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | |
| .........................................................................................................................GGGACAGTTGTTGGGGGTT.............................................................................................................. | 19 | 2.00 | 0.00 | 2.00 | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | |
| ......................................................................................GCTGGGGAGAAGGGGCATTTC............................................................................................................................................... | 21 | 1.00 | 0.00 | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | 1.00 | - | - | - | - | - | - | - | - | - | |
| ..............................................................................................................................................................................................GGGAGGAGAAGGGGCAGAGCT....................................... | 21 | 1.00 | 0.00 | - | - | - | - | - | - | 1.00 | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | |
| .....................................................................................................................................................................................TGGGGGAGGGGGAGGATTG.................................................. | 19 | 1.00 | 0.00 | - | - | - | - | - | - | - | - | - | - | - | 1.00 | - | - | - | - | - | - | - | - | - | - | - | - | - | - | |
| ..........................GGAGGGGAGGGTCAGCAA.............................................................................................................................................................................................................. | 18 | 1.00 | 0.00 | - | - | - | - | - | - | - | - | - | - | - | - | - | 1.00 | - | - | - | - | - | - | - | - | - | - | - | - | |
| ...........................................................................................................................GACAGTTGTTGGGGAGT.............................................................................................................. | 17 | 1.00 | 0.00 | 1.00 | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | |
| ................................................................................................AGGGGCAGTAGTGTCTGCT....................................................................................................................................... | 19 | 1.00 | 0.00 | - | 1.00 | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | |
| ...........................................................................................................................GACAGTTGTTGGGGATTGT............................................................................................................ | 19 | 1.00 | 0.00 | 1.00 | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | |
| ....................GTCTAGGGAGGGGAGTGGT................................................................................................................................................................................................................... | 19 | 1.00 | 0.00 | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | 1.00 | - | - | - | - | - | - | - | - | - | - | |
| ..........................................................................................................................GGACAGTTGTTGGGGTT............................................................................................................... | 17 | 1.00 | 0.00 | 1.00 | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | |
| ...........................................................................................................................GACAGTTGTTGGGGATTTC............................................................................................................ | 19 | 1.00 | 0.00 | 1.00 | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | |
| ............................................................................................................................................................GGAGAGGGAGCAAGGATGC........................................................................... | 19 | 1.00 | 0.00 | - | 1.00 | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | |
| ..................................................................................................................................................................................................GGAGAAGGGGCAGTTCGGG..................................... | 19 | 1.00 | 0.00 | - | - | 1.00 | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | |
| .........................................................................................................................GGGACAGTTGTTGGGGGTTG............................................................................................................. | 20 | 1.00 | 0.00 | 1.00 | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | |
| ................................................................CAGAGGGAAGGAGGGAGTCA...................................................................................................................................................................... | 20 | 1.00 | 0.00 | - | - | - | - | - | 1.00 | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | |
| .........................................................TCGGGGGCAGAGGGAGAG............................................................................................................................................................................... | 18 | 1.00 | 0.00 | - | - | - | - | 1.00 | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | |
| ...................................................................................................................................................................................TGTGGGGGAGGGGGAGGCG.................................................... | 19 | 1.00 | 0.00 | - | - | - | - | - | - | - | - | - | - | 1.00 | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | |
| ..........................................................CGGGGGCAGAGGGAAGGA.............................................................................................................................................................................. | 18 | 2 | 0.50 | 0.50 | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | 0.50 | - | - | - | - | - | - |
| ....................................................................................GTGCTGGGGAGAAGGGGC.................................................................................................................................................... | 18 | 3 | 0.33 | 0.33 | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | 0.33 | - | - | - | - | - |
| ...................................................................................................................................................................................TGTGGGGGAGGGGGAGGAG.................................................... | 19 | 3 | 0.33 | 0.33 | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | 0.33 | - | - | - | - |
| ......................................................GTGTCGGGGGCAGAG..................................................................................................................................................................................... | 15 | 6 | 0.17 | 0.17 | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | 0.17 | - |
| ..................................................................................GAGTGCTGGGGAGAAG........................................................................................................................................................ | 16 | 9 | 0.11 | 0.11 | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | 0.11 |
| TTAGAGTGGCCCATCGGTCGGTCTAGGGAGGGGAGGGTCAGCGTGGCAAGGTGTGTGTCGGGGGCAGAGGGAAGGAGGGAAGGAGTGCTGGGGAGAAGGGGCAGTAGTGTCGGGGTAGGAAGGGACAGTTGTTGGGGAGAAGAGGCAGTTGTGGAGGGAGAGGGAGCAAGGAATATTTGTGTGGGGGAGGGGGAGGAGAAGGGGCAGTTGTGACAGCTGGGGGGGAAGAGCCATTCTGAGGGGAAATTTG ......................................................((.((...((((...................))))..........(((((..((.((..........)).))..)))))........)).))........................................................................................................ ..................................................51.............................................................................................146...................................................................................................... | Size | Perfect hit | Total Norm | Perfect Norm | SRR207112(GSM721074) RRP40 knockdown. (RRP40 cell line) | SRR040036(GSM532921) G243N. (cervix) | RoviraIPAgo2(Rovira) total RNA. (ago2 breast) | SRR189784 | SRR029054(GSM402329) MCF7_smallRNAseq. (cell line) | GSM450601(GSM450601) miRNA sequencing raw reads from post-mortem s. (brain) | SRR343332(GSM796035) "KSHV (HHV8), EBV (HHV-4)". (cell line) | SRR040028(GSM532913) G026N. (cervix) | SRR553573(SRX182779) source: Cerebellum. (Cerebellum) | SRR207118(GSM721080) RRP40 knockdown. (RRP40 cell line) | SRR060984(GSM569188) Human plasma cell [09-001]. (cell line) | SRR189782 | SRR189779(GSM714639) cell line: HEK293clip variant: PAR-CLIPenzyma. (cell line) | SRR029127(GSM416756) A549. (cell line) | SRR330862(SRX091700) tissue: skin psoriatic involveddisease state:. (skin) | GSM450608(GSM450608) miRNA sequencing raw reads from post-mortem s. (brain) | GSM450602(GSM450602) miRNA sequencing raw reads from post-mortem s. (brain) | TAX577589(Rovira) total RNA. (breast) | SRR039623(GSM531986) HCV(+) HCC Tissue Sample. (liver) | SRR330890(SRX091728) tissue: skin psoriatic uninvolveddisease stat. (skin) | SRR330860(SRX091698) tissue: skin psoriatic involveddisease state:. (skin) | GSM956925Ago2PAZ(GSM956925) "cell line: HEK293 cell linepassages: 15-20ip. (ago2 cell line) | SRR189785 | SRR330912(SRX091750) tissue: normal skindisease state: normal. (skin) | SRR326279(GSM769509) cytoplasmic fraction was isolated using PARIS. (cell line) | SRR553572(SRX182778) source: Frontal Cortex. (Frontal Cortex) |
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| ..................................................................................................................GTAGGAAGGGACAGTTATC..................................................................................................................... | 19 | 2.00 | 0.00 | - | - | - | - | - | - | - | 1.00 | - | - | - | - | - | - | - | - | - | - | 1.00 | - | - | - | - | - | - | - | |
| ...................................................................................................................................................GTTGTGGAGGGAGAGCAG..................................................................................... | 18 | 1.00 | 0.00 | - | - | - | 1.00 | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | |
| ..................................................................................................................GTAGGAAGGGACAGTTA....................................................................................................................... | 17 | 1.00 | 0.00 | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | 1.00 | - | - | - | - | - | - | - | - | |
| ..............................................................................................ACACTACTGCCCCTTC............................................................................................................................................ | 16 | 1 | 1.00 | 1.00 | - | - | - | - | - | - | - | - | - | - | - | - | 1.00 | - | - | - | - | - | - | - | - | - | - | - | - | - |
| ..............................................................................................................................................................AATATTCCTTGCTCCCTCT......................................................................... | 19 | 1 | 1.00 | 1.00 | - | - | - | - | - | - | - | - | - | - | - | - | - | - | 1.00 | - | - | - | - | - | - | - | - | - | - | - |
| ......................................................................................................TCCTACCCCGACACTACT.................................................................................................................................. | 18 | 1 | 1.00 | 1.00 | - | - | - | - | - | - | - | - | 1.00 | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - |
| ..............................CACGCTGACCCTCCC............................................................................................................................................................................................................. | 15 | 5 | 0.20 | 0.20 | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | 0.20 | - | - | - |
| ......................................................................................................................................................................................CCCTTCTCCTCCCCCTCCCCC............................................... | 21 | 6 | 0.17 | 0.17 | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | 0.17 | - | - |