ID: uc002ghe.2_intron_0_0_chr17_7388177_f.5p
GENE: (1)
chr17:7388127-7388376+


(1)
AGO2.ip 		(10)
B-CELL 		(20)
BREAST 		(26)
CELL-LINE 		(9)
CERVIX 		(8)
HEART 		(5)
HELA 		(4)
LIVER 		(4)
OTHER 		(1)
RRP40.ip 		(26)
SKIN 		(1)
UTERUS 		(1)
XRN.ip

Sense strand
TGCGCACCATCAAGAGAGTCCAGTTCGGAGTCCTGAGTCCGGATGAACTGGTAAGCGGCTCTGTCCTCCCCTTCCCCCCTCCTCCCCTGGCGGGCGGGGCCGGACGGGGGCTGCGGAAACTTGGCGCTTTCTCGCTGCTTATGGGTGACGGGCCAGGAGCATGGCTCAGCAGCGCCAAGGCCGTGTAGGCGCCAGTCTCGGGCCTCCCAGAGTTATATTTTGCAAAGAGTTGAGCAGGCGTAGCGCTTTG
...............................................................................................................................................((((..((((((......)))))).....))))...(((.....)))............................................................
...........................................................................................................................................140..................................................193.......................................................
SizePerfect hitTotal NormPerfect NormSRR207110(GSM721072)
Nuclear RNA. (cell line)		SRR207116(GSM721078)
Nuclear RNA. (cell line)		DRR001488(DRX001042)
"Hela short nuclear cell fraction, LNA(+)". (hela)		SRR207115(GSM721077)
XRN1&2 knockdown. (XRN1/XRN2 cell line)		SRR037944(GSM510482)
293DcrTN_cand5. (cell line)		SRR330906(SRX091744)
tissue: normal skindisease state: normal. (skin)		SRR033712(GSM497057)
Burkitt Lymphoma (BL510). (B cell)		DRR001489(DRX001043)
"Hela short nuclear cell fraction, control". (hela)		SRR039192(GSM494811)
K562 cell line is derived from a CML patient . (cell line)		SRR033728(GSM497073)
MALT (MALT413). (B cell)		SRR207112(GSM721074)
RRP40 knockdown. (RRP40 cell line)		SRR387909(GSM843861)
specific-host: Homo sapienshost cell line: Su. (cell line)		SRR060983(GSM569187)
Human pre-germinal center B cell [09-001]. (cell line)		SRR039191(GSM494810)
PBMCs were isolated by ficoll gradient from t. (blood)		SRR330879(SRX091717)
tissue: skin psoriatic involveddisease state:. (skin)		DRR000557(DRX000315)
"THP-1 whole cell RNA, after 3 day treatment . (cell line)		SRR330863(SRX091701)
tissue: skin psoriatic involveddisease state:. (skin)		SRR033711(GSM497056)
GCB DLBCL (GCB110). (B cell)		SRR330867(SRX091705)
tissue: skin psoriatic involveddisease state:. (skin)		DRR000555(DRX000313)
"THP-1 whole cell RNA, no treatment". (cell line)		SRR039614(GSM531977)
HBV-infected Liver Tissue. (liver)		SRR330890(SRX091728)
tissue: skin psoriatic uninvolveddisease stat. (skin)		SRR342901(SRX096797)
small RNA seq of Left atrial tissue. (heart)		SRR094131(GSM651907)
small RNA(18-35nt)small RNA deep sequencing o. (uterus)		SRR553573(SRX182779)
source: Cerebellum. (Cerebellum)		GSM1105753INPUT(GSM1105753)
small RNA sequencing data. (hela)		SRR330904(SRX091742)
tissue: normal skindisease state: normal. (skin)		SRR015364(GSM380329)
Plasma B cells (PC44). (B cell)		TAX577739(Rovira)
total RNA. (breast)		SRR189779(GSM714639)
cell line: HEK293clip variant: PAR-CLIPenzyma. (cell line)		SRR037938(GSM510476)
293Red. (cell line)		TAX577742(Rovira)
total RNA. (breast)		SRR039635(GSM518472)
THP1_nuc_sRNAs. (cell line)		SRR330874(SRX091712)
tissue: skin psoriatic involveddisease state:. (skin)		SRR191624(GSM715734)
31genomic small RNA (size selected RNA from t. (breast)		DRR000559(DRX000317)
"THP-1 whole cell RNA, no treatment". (cell line)		SRR342900(SRX096796)
small RNA seq of Right atrial tissue. (heart)		TAX577579(Rovira)
total RNA. (breast)		SRR342895(SRX096791)
small RNA seq of Left atrial tissue. (heart)		TAX577453(Rovira)
total RNA. (breast)		SRR330920(SRX091758)
tissue: normal skindisease state: normal. (skin)		SRR553574(SRX182780)
source: Heart. (Heart)		TAX577743(Rovira)
total RNA. (breast)		SRR553572(SRX182778)
source: Frontal Cortex. (Frontal Cortex)		SRR330895(SRX091733)
tissue: skin psoriatic uninvolveddisease stat. (skin)		SRR330889(SRX091727)
tissue: skin psoriatic uninvolveddisease stat. (skin)		SRR191605(GSM715715)
76genomic small RNA (size selected RNA from t. (breast)		SRR191614(GSM715724)
92genomic small RNA (size selected RNA from t. (breast)		SRR189784SRR330880(SRX091718)
tissue: skin psoriatic involveddisease state:. (skin)		SRR330905(SRX091743)
tissue: normal skindisease state: normal. (skin)		SRR330912(SRX091750)
tissue: normal skindisease state: normal. (skin)		SRR029124(GSM416753)
HeLa. (hela)		GSM532876(GSM532876)
G547T. (cervix)		SRR330914(SRX091752)
tissue: normal skindisease state: normal. (skin)		SRR191568(GSM715678)
51genomic small RNA (size selected RNA from t. (breast)		SRR039615(GSM531978)
Severe Chronic Hepatitis B Liver Tissue. (liver)		SRR330888(SRX091726)
tissue: skin psoriatic uninvolveddisease stat. (skin)		SRR342894(SRX096790)
small RNA seq of Right atrial tissue. (heart)		SRR191554(GSM715664)
99genomic small RNA (size selected RNA from t. (breast)		SRR039190(GSM494809)
PBMCs were isolated by ficoll gradient from t. (blood)		GSM532883(GSM532883)
G871N. (cervix)		SRR040028(GSM532913)
G026N. (cervix)		SRR040011(GSM532896)
G529T. (cervix)		GSM532880(GSM532880)
G659T. (cervix)		SRR060985(GSM569189)
Human naive B cell [09-001]. (cell line)		SRR330910(SRX091748)
tissue: normal skindisease state: normal. (skin)		SRR330903(SRX091741)
tissue: skin psoriatic uninvolveddisease stat. (skin)		SRR326279(GSM769509)
cytoplasmic fraction was isolated using PARIS. (cell line)		SRR033710(GSM497055)
GCB DLBCL (GCB385). (B cell)		SRR330891(SRX091729)
tissue: skin psoriatic uninvolveddisease stat. (skin)		SRR033724(GSM497069)
L428 cell line (L428). (B cell)		SRR330864(SRX091702)
tissue: skin psoriatic involveddisease state:. (skin)		SRR060984(GSM569188)
Human plasma cell [09-001]. (cell line)		SRR189782TAX577740(Rovira)
total RNA. (breast)		SRR037937(GSM510475)
293cand2. (cell line)		SRR033716(GSM497061)
Mentle Cell Lymphoma (MCL114). (B cell)		SRR015358(GSM380323)
NaÌøve B Cell (Naive39). (B cell)		SRR039617(GSM531980)
HBV(+) Adjacent Tissue Sample 1. (liver)		SRR189785SRR040007(GSM532892)
G601T. (cervix)		TAX577741(Rovira)
total RNA. (breast)		SRR330917(SRX091755)
tissue: normal skindisease state: normal. (skin)		SRR189780(GSM714640)
cell line: HEK293clip variant: PAR-CLIPenzyma. (cell line)		SRR191416(GSM715526)
34genomic small RNA (size selected RNA from t. (breast)		SRR040014(GSM532899)
G623N. (cervix)		SRR330861(SRX091699)
tissue: skin psoriatic involveddisease state:. (skin)		SRR038859(GSM458542)
MM386. (cell line)		SRR039193(GSM494812)
HL60 cell line is derived from acute promyelo. (cell line)		DRR001486(DRX001040)
"Hela long cytoplasmic cell fraction, LNA(+)". (hela)		GSM956925AGO2Paz8(GSM956925)
"cell line: HEK293 cell linepassages: 15-20ip. (ago2 cell line)		SRR191404(GSM715514)
47genomic small RNA (size selected RNA from t. (breast)		GSM532882(GSM532882)
G696T. (cervix)		SRR330877(SRX091715)
tissue: skin psoriatic involveddisease state:. (skin)		SRR330902(SRX091740)
tissue: skin psoriatic uninvolveddisease stat. (skin)		SRR060168(GSM565978)
5-8F_nucleus. (cell line)		TAX577744(Rovira)
total RNA. (breast)		SRR330915(SRX091753)
tissue: normal skindisease state: normal. (skin)		SRR326282(GSM769512)
"Dicer mRNA was knocked down using siDicer, t. (cell line)		SRR015360(GSM380325)
Plasma B cells (PC137). (B cell)		SRR038853(GSM458536)
MELB. (cell line)		SRR342897(SRX096793)
small RNA seq of Left atrial tissue. (heart)		SRR326280(GSM769510)
total cell content of unperturbed cells was s. (cell line)		SRR342898(SRX096794)
small RNA seq of Right atrial tissue. (heart)		SRR033723(GSM497068)
L1236 cell line (L1236). (B cell)		SRR191460(GSM715570)
33genomic small RNA (size selected RNA from t. (breast)		SRR191632(GSM715742)
78genomic small RNA (size selected RNA from t. (breast)		SRR342896(SRX096792)
small RNA seq of Right atrial tissue. (heart)		SRR330916(SRX091754)
tissue: normal skindisease state: normal. (skin)		TAX577745(Rovira)
total RNA. (breast)		SRR191430(GSM715540)
167genomic small RNA (size selected RNA from . (breast)		SRR191596(GSM715706)
73genomic small RNA (size selected RNA from t. (breast)		SRR039611(GSM531974)
Human Normal Liver Tissue Sample 1. (liver)		SRR040027(GSM532912)
G220T. (cervix)		SRR343337SRR330887(SRX091725)
tissue: skin psoriatic uninvolveddisease stat. (skin)
..........................................................................................................................................................................AGCGCCAAGGCCGTGTAGG.............................................................19112.0012.0010.00---------------------------------1.00-----------------------------------------------------------------------------1.00----
.............................................AACTGGTAAGCGGCTCTG...........................................................................................................................................................................................18111.0011.0010.00-------------------------------1.00------------------------------------------------------------------------------------
....................................GTCCGGATGAACTGGTAAGC..................................................................................................................................................................................................20110.0010.00-2.00-6.00---------------1.00--------------------------------------------------------------------------1.00----------------------
......................................CCGGATGAACTGGTAAGCGG................................................................................................................................................................................................2019.009.00-2.00-1.00----1.00-------------1.00--------1.00--------------------------1.00----------------------------------------1.00--------1.00--------
........................TCGGAGTCCTGAGTCCGG................................................................................................................................................................................................................1817.007.007.00--------------------------------------------------------------------------------------------------------------------
....................................GTCCGGATGAACTGGTAAGCGGCT..............................................................................................................................................................................................2416.006.00-4.00--------------------------------------1.00---------------------------------------------------------------1.00------------
.....................................TCCGGATGAACTGGTAAGCGGCT..............................................................................................................................................................................................2315.005.00-1.00-------------------------------2.00--------------------1.00---------------------------1.00----------------------------------
......................................CCGGATGAACTGGTAAGCGGCT..............................................................................................................................................................................................2215.005.00------1.00-----------1.00----------------------------------------------1.00---------------------1.00-------------------------1.00---
.....................................TCCGGATGAACTGGTAAGCGG................................................................................................................................................................................................2115.005.00-1.00-1.00-----2.00-------------------------------1.00---------------------------------------------------------------------------
..........................GGAGTCCTGAGTCCGGATGAAC..........................................................................................................................................................................................................2215.005.00----4.00-----1.00----------------------------------------------------------------------------------------------------------
..........................................ATGAACTGGTAAGCGGCTCTG...........................................................................................................................................................................................2114.004.00---------3.00----------------------------------------------------------------------------1.00------------------------------
................................CTGAGTCCGGATGAACTGAAG.....................................................................................................................................................................................................2114.001.00-----------4.00---------------------------------------------------------------------------------------------------------
.................................TGAGTCCGGATGAACTGG.......................................................................................................................................................................................................1814.004.00----2.00----------1.00-----------------------------------------------------------------1.00-----------------------------------
....................................GTCCGGATGAACTGGTAAGCGGC...............................................................................................................................................................................................2313.003.00-2.001.00------------------------------------------------------------------------------------------------------------------
.......................................CGGATGAACTGGTAAGCGG................................................................................................................................................................................................1913.003.00------------1.001.00-----------------1.00-------------------------------------------------------------------------------------
...........................................................................................................................................................................GCGCCAAGGCCGTGTAGG.............................................................1813.003.001.00----1.00----------------------------------------------------------------------------------------------------1.00----------
...........................................TGAACTGGTAAGCGGCTCTG...........................................................................................................................................................................................2013.003.00---3.00-----------------------------------------------------------------------------------------------------------------
................................CTGAGTCCGGATGAAC..........................................................................................................................................................................................................1613.003.00--------------3.00------------------------------------------------------------------------------------------------------
..........................................ATGAACTGGTAAGCGGC...............................................................................................................................................................................................1713.003.00--3.00------------------------------------------------------------------------------------------------------------------
................................................................................................................................................GTGACGGGCCAGGAGCATGG......................................................................................2013.003.00------1.00-2.00------------------------------------------------------------------------------------------------------------
............................................................................................................................................................................CGCCAAGGCCGTGTAGGCGC..........................................................2013.003.00--3.00------------------------------------------------------------------------------------------------------------------
..........................................ATGAACTGGTAAGCGGCTCTGTT.........................................................................................................................................................................................2313.001.00----3.00----------------------------------------------------------------------------------------------------------------
..................TCCAGTTCGGAGTCCTGAGTCCG.................................................................................................................................................................................................................2312.002.00----------------------------1.00--------------------------1.00-------------------------------------------------------------
....................................................................................................................................................CGGGCCAGGAGCATGGCTC...................................................................................1912.002.00------------------------------2.00--------------------------------------------------------------------------------------
....................................GTCCGGATGAACTGGTAAGCGGCTCTG...........................................................................................................................................................................................2712.002.00-2.00-------------------------------------------------------------------------------------------------------------------
.....................................TCCGGATGAACTGGTAAG...................................................................................................................................................................................................1812.002.00----------1.00--------------------------------------------------1.00-------------------------------------------------------
..................................GAGTCCGGATGAACTGAAG.....................................................................................................................................................................................................1912.001.00---------------------1.00--------------------------------------------1.00--------------------------------------------------
..................................................................................................................................................GACGGGCCAGGAGCATGG......................................................................................1812.002.00---------------------------------------2.00-----------------------------------------------------------------------------
.......................................CGGATGAACTGGTAAGCGGCT..............................................................................................................................................................................................2112.002.00--------------------------1.00-----------------------1.00------------------------------------------------------------------
.....................................TCCGGATGAACTGGTAAGC..................................................................................................................................................................................................1912.002.00-------1.00------------------------------------------------------1.00------------------------------------------------------
...........................GAGTCCTGAGTCCGGATGAA...........................................................................................................................................................................................................2012.002.00-------------------------------------1.00-------------------------------------1.00-----------------------------------------
...................................AGTCCGGATGAACTGGTAAGCGGCT..............................................................................................................................................................................................2512.002.00-------------------------------------1.00------------------------------------------------------------------------1.00------
.....................................TCCGGATGAACTGGTAAGCGGCTCTGTC.........................................................................................................................................................................................2812.002.00--2.00------------------------------------------------------------------------------------------------------------------
............................................GAACTGGTAAGCGGCTCTGT..........................................................................................................................................................................................2012.002.00------------------------------------------1.00----------------------------------1.00---------------------------------------
.......................................CGGATGAACTGGTAAGCGGCTCT............................................................................................................................................................................................2312.002.00-----1.00-------------------------------------------------------------------1.00-------------------------------------------
...........................................................................................................................................TATGGGTGACGGGCCAGGAG...........................................................................................2012.002.00---2.00-----------------------------------------------------------------------------------------------------------------
........................................GGATGAACTGGTAAGCGGATCT............................................................................................................................................................................................221.000.00-----------------------------------------1.00---------------------------------------------------------------------------
..................................GAGTCCGGATGAACTGG.......................................................................................................................................................................................................1711.001.00--1.00------------------------------------------------------------------------------------------------------------------
.............................GTCCTGAGTCCGGATGAACTG........................................................................................................................................................................................................2111.001.00---------------1.00-----------------------------------------------------------------------------------------------------
...........................................................................................................................................................................GCGCCAAGGCCGTGTAGGCG...........................................................2011.001.00----------------------1.00----------------------------------------------------------------------------------------------
.......................................CGGATGAACTGGTAAGCGGC...............................................................................................................................................................................................2011.001.00--1.00------------------------------------------------------------------------------------------------------------------
...............................CCTGAGTCCGGATGAACTGA.......................................................................................................................................................................................................201.000.00----------------------------------------------1.00----------------------------------------------------------------------
......................................CCGGATGAACTGGTAAGCGGCTGT............................................................................................................................................................................................2411.005.00---------------------------------------------------------------------1.00-----------------------------------------------
...........................................................................................................................................................................GCGCCAAGGCCGTGTAG..............................................................1711.001.00------------------------------------------------------------------------------------------------------1.00--------------
................................CTGAGTCCGGATGAACTG........................................................................................................................................................................................................1811.001.00--1.00------------------------------------------------------------------------------------------------------------------
..........................................................................................................GGGGCTGCGGAAACTTGGCG............................................................................................................................2011.001.00-------------------------------------------1.00-------------------------------------------------------------------------
............................................................................CCCTCCTCCCCTGGCGGGC...........................................................................................................................................................1911.001.00----------------------------------------------------------------------1.00----------------------------------------------
..............................TCCTGAGTCCGGATGAACTGG.......................................................................................................................................................................................................2111.001.00---1.00-----------------------------------------------------------------------------------------------------------------
.........................................GATGAACTGGTAAGCGGCT..............................................................................................................................................................................................1911.001.00------1.00--------------------------------------------------------------------------------------------------------------
..........................................................................................................................................................................................................................TTTGCAAAGAGTTGAGCAG.............1911.001.00--------------------------------------------------------1.00------------------------------------------------------------
.............................................AACTGGTAAGCGGCTCTGT..........................................................................................................................................................................................1911.001.00-------------1.00-------------------------------------------------------------------------------------------------------
......................................CCGGATGAACTGGTAAGC..................................................................................................................................................................................................1811.001.00-------1.00-------------------------------------------------------------------------------------------------------------
..............................................................................................................................CTTTCTCGCTGCTTATGGGTGACGG...................................................................................................2511.001.00-----1.00---------------------------------------------------------------------------------------------------------------
......................................CCGGATGAACTGGTAAGCGGCTCT............................................................................................................................................................................................2411.001.00------1.00--------------------------------------------------------------------------------------------------------------
................................CTGAGTCCGGATGAACTGG.......................................................................................................................................................................................................1911.001.00------------------------------------------------------------------------------------------1.00--------------------------
.............................GTCCTGAGTCCGGATGAACTGGTAAGCGG................................................................................................................................................................................................2911.001.00-1.00-------------------------------------------------------------------------------------------------------------------
....................CAGTTCGGAGTCCTGAGTCCGGATGAACTGG.......................................................................................................................................................................................................3111.001.00-----1.00---------------------------------------------------------------------------------------------------------------
........................................GGATGAACTGGTAAGCGGCTCTGTT.........................................................................................................................................................................................251.000.00-----------------1.00---------------------------------------------------------------------------------------------------
........................................................................................GGCGGGCGGGGCCGG...................................................................................................................................................1501.001.00-------------------------------------------------------------------------------------------1.00-------------------------
...........................GAGTCCTGAGTCCGGA...............................................................................................................................................................................................................1611.001.00------------------1.00--------------------------------------------------------------------------------------------------
...............................................................................................................................................................CATGGCTCAGCAGCGCCAAGGCCGCG.................................................................261.000.00------------------------------------------------------------------------------------1.00--------------------------------
....................................GTCCGGATGAACTGGTAAGCGGCTCT............................................................................................................................................................................................2611.001.00---------------------------------------------1.00-----------------------------------------------------------------------
....................................GTCCGGATGAACTGGTAAGCGG................................................................................................................................................................................................2211.001.00------------------------------------------------------------------------------------------------1.00--------------------
..................................................................................................................................................................GGCTCAGCAGCGCCAACG......................................................................181.000.00---------------------------------------------------------------------------------------------------------------1.00-----
...........................GAGTCCTGAGTCCGGATG.............................................................................................................................................................................................................1811.001.00----------------------------1.00----------------------------------------------------------------------------------------
....................................GTCCGGATGAACTGGTAAGCGGCTCTGT..........................................................................................................................................................................................2811.001.00-----1.00---------------------------------------------------------------------------------------------------------------
.........................................................................................................................................................................CAGCGCCAAGGCCGTGTA...............................................................1811.001.00-------------------------------------------------------------------------------------1.00-------------------------------
.......................................CGGATGAACTGGTAAGCGGCTCTG...........................................................................................................................................................................................2411.001.00--1.00------------------------------------------------------------------------------------------------------------------
........................................................................................GGCGGGCGGGGCCGGTTTA...............................................................................................................................................1901.001.00------------------------------------------------------------------------------1.00--------------------------------------
...............................................................................................................................................GGTGACGGGCCAGGAGCATGGC.....................................................................................2211.001.00---------1.00-----------------------------------------------------------------------------------------------------------
...................................................................................................CCGGACGGGGGCTGCGGG.....................................................................................................................................181.000.00--------------------------------------------------------------------------------1.00------------------------------------
...............................................CTGGTAAGCGGCTCTG...........................................................................................................................................................................................1611.001.00----------------1.00----------------------------------------------------------------------------------------------------
......................................CCGGATGAACTGGTAAGCG.................................................................................................................................................................................................1911.001.00--------------------1.00------------------------------------------------------------------------------------------------
..................................GAGTCCGGATGAACTGGTAAGCGGCT..............................................................................................................................................................................................2611.001.00--------1.00------------------------------------------------------------------------------------------------------------
..............................TCCTGAGTCCGGATGAACTG........................................................................................................................................................................................................2011.001.00------------1.00--------------------------------------------------------------------------------------------------------
.....................................TCCGGATGAACTGGTAAAA..................................................................................................................................................................................................191.000.00-----------------------------------------------------------------------1.00---------------------------------------------
.........................................GATGAACTGGTAAGCGGCTCT............................................................................................................................................................................................2111.001.00------1.00--------------------------------------------------------------------------------------------------------------
................................CTGAGTCCGGATGAACTGGT......................................................................................................................................................................................................2011.001.00-----------------------------------1.00---------------------------------------------------------------------------------
.........................................GATGAACTGGTAAGCGGC...............................................................................................................................................................................................1811.001.00-1.00-------------------------------------------------------------------------------------------------------------------
..........................................ATGAACTGGTAAGCGGCTCTGT..........................................................................................................................................................................................2211.001.00--------1.00------------------------------------------------------------------------------------------------------------
.................................TGAGTCCGGATGAACTGAAGC....................................................................................................................................................................................................2111.001.00-------------------------1.00-------------------------------------------------------------------------------------------
...................................................................................................................................................................GCTCAGCAGCGCCAAGGCCGTGTAGG.............................................................2611.001.00--------------------------------------------------------------------------------------------------1.00------------------
.................................TGAGTCCGGATGAAC..........................................................................................................................................................................................................1511.001.00--------------------------------------1.00------------------------------------------------------------------------------
..............................................ACTGGTAAGCGGCTCTG...........................................................................................................................................................................................1711.001.00-----------------------------------1.00---------------------------------------------------------------------------------
.....................AGTTCGGAGTCCTGAGACC..................................................................................................................................................................................................................191.000.00--------------------------------------------------------------------------------------------1.00------------------------
........................TCGGAGTCCTGAGTCCGGATGAACTGG.......................................................................................................................................................................................................2711.001.00---------------------1.00-----------------------------------------------------------------------------------------------
.....................................................................................................................................................................................CGTGTAGGCGCCAGTCT....................................................1711.001.00----------1.00----------------------------------------------------------------------------------------------------------
..........CAAGAGAGTCCAGTTCGGAGTC..........................................................................................................................................................................................................................2211.001.00-------------------------------------------------1.00-------------------------------------------------------------------
................AGTCCAGTTCGGAGTCCT........................................................................................................................................................................................................................1811.001.00-----------------------1.00---------------------------------------------------------------------------------------------
..................................................................................................................................................GACGGGCCAGGAGCATGGC.....................................................................................1911.001.00--------------------------------1.00------------------------------------------------------------------------------------
...................................AGTCCGGATGAACTGGTAAGC..................................................................................................................................................................................................2111.001.00-------1.00-------------------------------------------------------------------------------------------------------------
..................................GAGTCCGGATGAACTG........................................................................................................................................................................................................1611.001.00--1.00------------------------------------------------------------------------------------------------------------------
........................................GGATGAACTGGTAAGCGGCTCTGTCTTT......................................................................................................................................................................................2811.001.00----------------------------------------------------------------------------------------------------1.00----------------
...............................................................................................................................................................................................................................AAAGAGTTGAGCAGGCG..........1711.001.00-----------------------------------------------------------1.00---------------------------------------------------------
..........................................................................................................................................TTATGGGTGACGGGCCAGGAG...........................................................................................2111.001.00----------------1.00----------------------------------------------------------------------------------------------------
.......................................CGGATGAACTGGTAAG...................................................................................................................................................................................................1611.001.00----------------1.00----------------------------------------------------------------------------------------------------
.................................TGAGTCCGGATGAACTG........................................................................................................................................................................................................1711.001.00-------1.00-------------------------------------------------------------------------------------------------------------
.......................TTCGGAGTCCTGAGTCCG.................................................................................................................................................................................................................1811.001.00-----------------------------------------------------------------------------------------------1.00---------------------
........................................................................................GGCGGGCGGGGCCGGTGT................................................................................................................................................1801.001.00-----------------------------------------------------1.00---------------------------------------------------------------
......................................CCGGATGAACTGGTAAGCGGCTC.............................................................................................................................................................................................2311.001.00-------------------------------------------------------------------------------------------------------------1.00-------
............................AGTCCTGAGTCCGGATG.............................................................................................................................................................................................................1711.001.00---------------------------------------------------1.00-----------------------------------------------------------------
...................................................................................................CCGGACGGGGGCTGCGGC.....................................................................................................................................181.000.00-------------------------------------------------------------------------------------------------------1.00-------------
.......................................................................TTCCCCCCTCCTCCCGGC.................................................................................................................................................................181.000.00--------------------------1.00------------------------------------------------------------------------------------------
.......................................CGGATGAACTGGTAAGCGGCA..............................................................................................................................................................................................2111.001.00---------------------------1.00-----------------------------------------------------------------------------------------
.............................................................................CCTCCTCCCCTGGCGGCCGC.........................................................................................................................................................201.000.00-----------------------------------------------------------------------------------1.00---------------------------------
........................................................................................................CGGGGGCTGCGGAAACTTGG..............................................................................................................................2011.001.00-1.00-------------------------------------------------------------------------------------------------------------------
............AGAGAGTCCAGTTCGGAGTCCTG.......................................................................................................................................................................................................................2311.001.00-----------------------------1.00---------------------------------------------------------------------------------------
....................................................AAGCGGCTCTGTCCTCCCCTTCCCTAT...........................................................................................................................................................................271.000.00--------------------------------------------------------------------------1.00------------------------------------------
.....................................TCCGGATGAACTGGTAAGCGGCTCT............................................................................................................................................................................................2511.001.00------------1.00--------------------------------------------------------------------------------------------------------
...........AAGAGAGTCCAGTTCGGAGTCCTGAGTCCGG................................................................................................................................................................................................................3111.001.00------------------------1.00--------------------------------------------------------------------------------------------
..................................................................................................GCCGGACGGGGGCTGCGGAAACTTGTT.............................................................................................................................271.000.00------1.00--------------------------------------------------------------------------------------------------------------
........................................GGATGAACTGGTAAGCGGCTCTGTC.........................................................................................................................................................................................2511.001.00----------------------------------------------------------------------------------------1.00----------------------------
..........................................ATGAACTGGTAAGCGGCTCT............................................................................................................................................................................................2011.001.00----------1.00----------------------------------------------------------------------------------------------------------
.......................................CGGATGAACTGGTAAGCG.................................................................................................................................................................................................1811.001.00-----------------------------------------------------------------------------------------1.00---------------------------
......................................................................................................................................................................................................................ATATTTTGCAAAGAGTTGAGCAGGCGTAG.......2911.001.00----------------------------------------1.00----------------------------------------------------------------------------
...............................................CTGGTAAGCGGCTCTGTCCT.......................................................................................................................................................................................2011.001.00---------------------------------------------------------1.00-----------------------------------------------------------
....................................GTCCGGATGAACTGGTAAGCGGCTC.............................................................................................................................................................................................2511.001.00---------------------------1.00-----------------------------------------------------------------------------------------
...............................................CTGGTAAGCGGCTCTGTCC........................................................................................................................................................................................1911.001.00------------------------------------------------------------------------------------------------------------------1.00--
..................................GAGTCCGGATGAACTGAAGC....................................................................................................................................................................................................2011.001.00------------------------------------1.00--------------------------------------------------------------------------------
.............GAGAGTCCAGTTCGGAGTCC.........................................................................................................................................................................................................................2011.001.00---------------------------------------------------------------1.00-----------------------------------------------------
........................................................................................................................................GCTTATGGGTGACGGGCCAGGAG...........................................................................................2311.001.00---1.00-----------------------------------------------------------------------------------------------------------------
...................................AGTCCGGATGAACTGGTAAGCGGCTC.............................................................................................................................................................................................2611.001.00-----1.00---------------------------------------------------------------------------------------------------------------
......................................CCGGATGAACTGGTAAGCGGCTCTG...........................................................................................................................................................................................2511.001.00-----------------1.00---------------------------------------------------------------------------------------------------
...................................AGTCCGGATGAACTGG.......................................................................................................................................................................................................1621.001.00--1.00------------------------------------------------------------------------------------------------------------------
.........................................................GCTCTGTCCTCCCCTTCCCCCC...........................................................................................................................................................................2211.001.00------------------------------------------------------------------------1.00--------------------------------------------
....................................................................................................................................................CGGGCCAGGAGCATGGCT....................................................................................1811.001.00-------------------------------------------------------------------------------------------------1.00-------------------
..CGCACCATCAAGAGAGTCCAGTTCGG..............................................................................................................................................................................................................................2611.001.00------------------------------------1.00--------------------------------------------------------------------------------
.............................................AACTGGTAAGCGGCTCTGTC.........................................................................................................................................................................................2011.001.00-------------------------------------------------------------------------------1.00-------------------------------------
.......................................................................................TGGCGGGCGGGGCCGGC..................................................................................................................................................171.000.00---------------------------------------------------------------------------------------------1.00-----------------------
..........................................ATGAACTGGTAAGCGG................................................................................................................................................................................................1611.001.00--------------------------------------1.00------------------------------------------------------------------------------
............................AGTCCTGAGTCCGGATGAACTGGTAAGC..................................................................................................................................................................................................2811.001.00--1.00------------------------------------------------------------------------------------------------------------------
............................................GAACTGGTAAGCGGCTCT............................................................................................................................................................................................1811.001.00------------------------------------------------------------1.00--------------------------------------------------------
................................................................................................................................................................................................CAGTCTCGGGCCTCCCAG........................................1811.001.00-------------------1.00-------------------------------------------------------------------------------------------------
.......................................................................................TGGCGGGCGGGGCCGTTG.................................................................................................................................................181.000.00----------------------------------------------------------------1.00----------------------------------------------------
.................................TGAGTCCGGATGAACTGGT......................................................................................................................................................................................................1911.001.00----------------------------------------------------1.00----------------------------------------------------------------
...................................................................................................................................................ACGGGCCAGGAGCATGG......................................................................................1711.001.00----------------------------------1.00----------------------------------------------------------------------------------
........................................................................................................................................................................GCAGCGCCAAGGCCGTGTAGG.............................................................2111.001.00---1.00-----------------------------------------------------------------------------------------------------------------
....................................................................................................................................................................................................CTCGGGCCTCCCAGAGTT....................................1811.001.00-------------------------1.00-------------------------------------------------------------------------------------------
............................................................................................................................................ATGGGTGACGGGCCAGGA............................................................................................1811.001.00---------------------------------------------------------------------------------------------------------1.00-----------
..........................GGAGTCCTGAGTCCGGA...............................................................................................................................................................................................................1711.001.00-----------------------------------------------1.00---------------------------------------------------------------------
............................................................................................................................................................................CGCCAAGGCCGTGTAGG.............................................................1711.001.00-------1.00-------------------------------------------------------------------------------------------------------------
......................................CCGGATGAACTGGTAAGCGGCTCTGT..........................................................................................................................................................................................2611.001.00-----1.00---------------------------------------------------------------------------------------------------------------
.....................................TCCGGATGAACTGGTAAGCG.................................................................................................................................................................................................2011.001.00---------------1.00-----------------------------------------------------------------------------------------------------
...............................CCTGAGTCCGGATGAACTGGTAAGCGGC...............................................................................................................................................................................................2811.001.00-1.00-------------------------------------------------------------------------------------------------------------------
....................................................AAGCGGCTCTGTCCTCCCCTT.................................................................................................................................................................................2111.001.00-----------------------1.00---------------------------------------------------------------------------------------------
...........................................................TCTGTCCTCCCCTTCCACA............................................................................................................................................................................191.000.00------------------------1.00--------------------------------------------------------------------------------------------
.......................................CGGATGAACTGGTAAGCGGCTC.............................................................................................................................................................................................2211.001.00-----1.00---------------------------------------------------------------------------------------------------------------
...............GAGTCCAGTTCGGAGTC..........................................................................................................................................................................................................................1711.001.00--1.00------------------------------------------------------------------------------------------------------------------
.........................................GATGAACTGGTAAGCGGCTCTG...........................................................................................................................................................................................2211.001.00--------1.00------------------------------------------------------------------------------------------------------------
.......................................CGGATGAACTGGTAA....................................................................................................................................................................................................1520.500.50-----0.50---------------------------------------------------------------------------------------------------------------
..................................................................................................................................................................................................GTCTCGGGCCTCCCAG........................................1620.500.50-------0.50-------------------------------------------------------------------------------------------------------------
................................................................................................GGGCCGGACGGGGGC...........................................................................................................................................1560.170.17-------------------------------------------------------------------------------------------------------------------0.17-
...............................................................TCCTCCCCTTCCCCCCTCC........................................................................................................................................................................1980.120.12--------------------------------------------------------------------------------------------------------------------0.12

Antisense strand
TGCGCACCATCAAGAGAGTCCAGTTCGGAGTCCTGAGTCCGGATGAACTGGTAAGCGGCTCTGTCCTCCCCTTCCCCCCTCCTCCCCTGGCGGGCGGGGCCGGACGGGGGCTGCGGAAACTTGGCGCTTTCTCGCTGCTTATGGGTGACGGGCCAGGAGCATGGCTCAGCAGCGCCAAGGCCGTGTAGGCGCCAGTCTCGGGCCTCCCAGAGTTATATTTTGCAAAGAGTTGAGCAGGCGTAGCGCTTTG
...............................................................................................................................................((((..((((((......)))))).....))))...(((.....)))............................................................
...........................................................................................................................................140..................................................193.......................................................
SizePerfect hitTotal NormPerfect NormSRR207110(GSM721072)
Nuclear RNA. (cell line)		SRR207116(GSM721078)
Nuclear RNA. (cell line)		DRR001488(DRX001042)
"Hela short nuclear cell fraction, LNA(+)". (hela)		SRR207115(GSM721077)
XRN1&2 knockdown. (XRN1/XRN2 cell line)		SRR037944(GSM510482)
293DcrTN_cand5. (cell line)		SRR330906(SRX091744)
tissue: normal skindisease state: normal. (skin)		SRR033712(GSM497057)
Burkitt Lymphoma (BL510). (B cell)		DRR001489(DRX001043)
"Hela short nuclear cell fraction, control". (hela)		SRR039192(GSM494811)
K562 cell line is derived from a CML patient . (cell line)		SRR033728(GSM497073)
MALT (MALT413). (B cell)		SRR207112(GSM721074)
RRP40 knockdown. (RRP40 cell line)		SRR387909(GSM843861)
specific-host: Homo sapienshost cell line: Su. (cell line)		SRR060983(GSM569187)
Human pre-germinal center B cell [09-001]. (cell line)		SRR039191(GSM494810)
PBMCs were isolated by ficoll gradient from t. (blood)		SRR330879(SRX091717)
tissue: skin psoriatic involveddisease state:. (skin)		DRR000557(DRX000315)
"THP-1 whole cell RNA, after 3 day treatment . (cell line)		SRR330863(SRX091701)
tissue: skin psoriatic involveddisease state:. (skin)		SRR033711(GSM497056)
GCB DLBCL (GCB110). (B cell)		SRR330867(SRX091705)
tissue: skin psoriatic involveddisease state:. (skin)		DRR000555(DRX000313)
"THP-1 whole cell RNA, no treatment". (cell line)		SRR039614(GSM531977)
HBV-infected Liver Tissue. (liver)		SRR330890(SRX091728)
tissue: skin psoriatic uninvolveddisease stat. (skin)		SRR342901(SRX096797)
small RNA seq of Left atrial tissue. (heart)		SRR094131(GSM651907)
small RNA(18-35nt)small RNA deep sequencing o. (uterus)		SRR553573(SRX182779)
source: Cerebellum. (Cerebellum)		GSM1105753INPUT(GSM1105753)
small RNA sequencing data. (hela)		SRR330904(SRX091742)
tissue: normal skindisease state: normal. (skin)		SRR015364(GSM380329)
Plasma B cells (PC44). (B cell)		TAX577739(Rovira)
total RNA. (breast)		SRR189779(GSM714639)
cell line: HEK293clip variant: PAR-CLIPenzyma. (cell line)		SRR037938(GSM510476)
293Red. (cell line)		TAX577742(Rovira)
total RNA. (breast)		SRR039635(GSM518472)
THP1_nuc_sRNAs. (cell line)		SRR330874(SRX091712)
tissue: skin psoriatic involveddisease state:. (skin)		SRR191624(GSM715734)
31genomic small RNA (size selected RNA from t. (breast)		DRR000559(DRX000317)
"THP-1 whole cell RNA, no treatment". (cell line)		SRR342900(SRX096796)
small RNA seq of Right atrial tissue. (heart)		TAX577579(Rovira)
total RNA. (breast)		SRR342895(SRX096791)
small RNA seq of Left atrial tissue. (heart)		TAX577453(Rovira)
total RNA. (breast)		SRR330920(SRX091758)
tissue: normal skindisease state: normal. (skin)		SRR553574(SRX182780)
source: Heart. (Heart)		TAX577743(Rovira)
total RNA. (breast)		SRR553572(SRX182778)
source: Frontal Cortex. (Frontal Cortex)		SRR330895(SRX091733)
tissue: skin psoriatic uninvolveddisease stat. (skin)		SRR330889(SRX091727)
tissue: skin psoriatic uninvolveddisease stat. (skin)		SRR191605(GSM715715)
76genomic small RNA (size selected RNA from t. (breast)		SRR191614(GSM715724)
92genomic small RNA (size selected RNA from t. (breast)		SRR189784SRR330880(SRX091718)
tissue: skin psoriatic involveddisease state:. (skin)		SRR330905(SRX091743)
tissue: normal skindisease state: normal. (skin)		SRR330912(SRX091750)
tissue: normal skindisease state: normal. (skin)		SRR029124(GSM416753)
HeLa. (hela)		GSM532876(GSM532876)
G547T. (cervix)		SRR330914(SRX091752)
tissue: normal skindisease state: normal. (skin)		SRR191568(GSM715678)
51genomic small RNA (size selected RNA from t. (breast)		SRR039615(GSM531978)
Severe Chronic Hepatitis B Liver Tissue. (liver)		SRR330888(SRX091726)
tissue: skin psoriatic uninvolveddisease stat. (skin)		SRR342894(SRX096790)
small RNA seq of Right atrial tissue. (heart)		SRR191554(GSM715664)
99genomic small RNA (size selected RNA from t. (breast)		SRR039190(GSM494809)
PBMCs were isolated by ficoll gradient from t. (blood)		GSM532883(GSM532883)
G871N. (cervix)		SRR040028(GSM532913)
G026N. (cervix)		SRR040011(GSM532896)
G529T. (cervix)		GSM532880(GSM532880)
G659T. (cervix)		SRR060985(GSM569189)
Human naive B cell [09-001]. (cell line)		SRR330910(SRX091748)
tissue: normal skindisease state: normal. (skin)		SRR330903(SRX091741)
tissue: skin psoriatic uninvolveddisease stat. (skin)		SRR326279(GSM769509)
cytoplasmic fraction was isolated using PARIS. (cell line)		SRR033710(GSM497055)
GCB DLBCL (GCB385). (B cell)		SRR330891(SRX091729)
tissue: skin psoriatic uninvolveddisease stat. (skin)		SRR033724(GSM497069)
L428 cell line (L428). (B cell)		SRR330864(SRX091702)
tissue: skin psoriatic involveddisease state:. (skin)		SRR060984(GSM569188)
Human plasma cell [09-001]. (cell line)		SRR189782TAX577740(Rovira)
total RNA. (breast)		SRR037937(GSM510475)
293cand2. (cell line)		SRR033716(GSM497061)
Mentle Cell Lymphoma (MCL114). (B cell)		SRR015358(GSM380323)
NaÌøve B Cell (Naive39). (B cell)		SRR039617(GSM531980)
HBV(+) Adjacent Tissue Sample 1. (liver)		SRR189785SRR040007(GSM532892)
G601T. (cervix)		TAX577741(Rovira)
total RNA. (breast)		SRR330917(SRX091755)
tissue: normal skindisease state: normal. (skin)		SRR189780(GSM714640)
cell line: HEK293clip variant: PAR-CLIPenzyma. (cell line)		SRR191416(GSM715526)
34genomic small RNA (size selected RNA from t. (breast)		SRR040014(GSM532899)
G623N. (cervix)		SRR330861(SRX091699)
tissue: skin psoriatic involveddisease state:. (skin)		SRR038859(GSM458542)
MM386. (cell line)		SRR039193(GSM494812)
HL60 cell line is derived from acute promyelo. (cell line)		DRR001486(DRX001040)
"Hela long cytoplasmic cell fraction, LNA(+)". (hela)		GSM956925AGO2Paz8(GSM956925)
"cell line: HEK293 cell linepassages: 15-20ip. (ago2 cell line)		SRR191404(GSM715514)
47genomic small RNA (size selected RNA from t. (breast)		GSM532882(GSM532882)
G696T. (cervix)		SRR330877(SRX091715)
tissue: skin psoriatic involveddisease state:. (skin)		SRR330902(SRX091740)
tissue: skin psoriatic uninvolveddisease stat. (skin)		SRR060168(GSM565978)
5-8F_nucleus. (cell line)		TAX577744(Rovira)
total RNA. (breast)		SRR330915(SRX091753)
tissue: normal skindisease state: normal. (skin)		SRR326282(GSM769512)
"Dicer mRNA was knocked down using siDicer, t. (cell line)		SRR015360(GSM380325)
Plasma B cells (PC137). (B cell)		SRR038853(GSM458536)
MELB. (cell line)		SRR342897(SRX096793)
small RNA seq of Left atrial tissue. (heart)		SRR326280(GSM769510)
total cell content of unperturbed cells was s. (cell line)		SRR342898(SRX096794)
small RNA seq of Right atrial tissue. (heart)		SRR033723(GSM497068)
L1236 cell line (L1236). (B cell)		SRR191460(GSM715570)
33genomic small RNA (size selected RNA from t. (breast)		SRR191632(GSM715742)
78genomic small RNA (size selected RNA from t. (breast)		SRR342896(SRX096792)
small RNA seq of Right atrial tissue. (heart)		SRR330916(SRX091754)
tissue: normal skindisease state: normal. (skin)		TAX577745(Rovira)
total RNA. (breast)		SRR191430(GSM715540)
167genomic small RNA (size selected RNA from . (breast)		SRR191596(GSM715706)
73genomic small RNA (size selected RNA from t. (breast)		SRR039611(GSM531974)
Human Normal Liver Tissue Sample 1. (liver)		SRR040027(GSM532912)
G220T. (cervix)		SRR343337SRR330887(SRX091725)
tissue: skin psoriatic uninvolveddisease stat. (skin)
.........................................................................................................................................................................................ATAACTCTGGGAGGCCCGAGACTGGCGCCTA.................................. 3111.001.00-----------------1.00---------------------------------------------------------------------------------------------------
....TGGACTCTCTTGATGGTG.................................................................................................................................................................................................................................... 1811.001.00------1.00--------------------------------------------------------------------------------------------------------------
................TCAGGACTCCGAACTGGACT...................................................................................................................................................................................................................... 2011.001.00-----------------------------------------------------------------------------------------------------------1.00---------
........................................................................................................................................................CCAGGAGCATGGCTCAGA................................................................................ 181.000.00----1.00----------------------------------------------------------------------------------------------------------------
............................................................................................GGCGGGGCCGGACGGGCGC........................................................................................................................................... 191.000.00--------------------1.00------------------------------------------------------------------------------------------------
..................................................................................................................................................................................................GTCTCGGGCCTCCCACT....................................... 171.000.00------------------------------------------1.00--------------------------------------------------------------------------
.........................................................................CCCCCCTCCTCCCCTGCAA.............................................................................................................................................................. 191.000.00-----------------------------------------------------------------------------------------------------1.00---------------
....................................GTCCGGATGAACTGGCCT.................................................................................................................................................................................................... 181.000.00-------------------------------------------------------------------1.00-------------------------------------------------
..............................................................................................................................................GCTCCTGGCCCGTCACCC.......................................................................................... 1811.001.00-------1.00-------------------------------------------------------------------------------------------------------------
...........................GAGTCCTGAGTCCGGTG.............................................................................................................................................................................................................. 171.000.00--------------------------------------------1.00------------------------------------------------------------------------
....CTGGACTCTCTTGATGGTG................................................................................................................................................................................................................................... 1911.001.00-------------1.00-------------------------------------------------------------------------------------------------------
.....................................................................CCTTCCCCCCTCCTCATGG.................................................................................................................................................................. 191.000.00------------------------------------------------1.00--------------------------------------------------------------------
.........................................................................................GCGGGCGGGGCCGGAGG................................................................................................................................................ 171.000.00--------------------------------------------------------------------1.00------------------------------------------------
............................................................................CCCTCCTCCCCTGGCTAC............................................................................................................................................................ 181.000.00-----------------------------1.00---------------------------------------------------------------------------------------
...............................................................................................GGGGCCGGACGGGGGCTAA........................................................................................................................................ 191.000.00----------------------------------------------------------------------------1.00----------------------------------------
........................................CTTACCAGTTCATCC................................................................................................................................................................................................... 1520.500.50-------------------------------------------0.50-------------------------------------------------------------------------
.........................................................................................................................................................................................................AATATAACTCTGGGAGGC............................... 1820.500.50-------0.50-------------------------------------------------------------------------------------------------------------
...........................................................................................CCGTCCGGCCCCGCCC............................................................................................................................................... 1690.110.11--------------------------------------------0.11------------------------------------------------------------------------