ID: uc002ggj.3_intron_0_0_chr17_7284434_f.5p
GENE: (1)
chr17:7284384-7284633+


(2)
B-CELL
(2)
BRAIN
(19)
BREAST
(20)
CELL-LINE
(6)
CERVIX
(1)
HEART
(1)
HELA
(1)
KIDNEY
(5)
LIVER
(3)
OTHER
(1)
RRP40.ip
(58)
SKIN
(1)
UTERUS
(1)
XRN.ip

Sense strand
AGCCCAGGCAGCCTGGGAGGTTCCGCAGTCGCCGCTTCCGCCTTGACCAGGTGAGGGTCCGGACCGAGCAGGGGGCCCGGGCTGGGGAGAGCCGGCGGAGCAGCCGTCGCTGGGGGCGCGTCCGGGGGGCGCTGGGCCTGTCCTCTTCTCCTGCGTCCTTCCCTCCCGCAGCCGCGCTTCCTCCTGTCTCCCTTCTGCGCTCCCCGCTTCCCACCGAGCGCGCAGGGCCGGGTCCCCCAGGGTCCTGGGC
..............................................((......))..((((.((.(((.((....))..))).)).....))))...........................................................................................................................................................
............................................45.................................................96.........................................................................................................................................................
SizePerfect hitTotal NormPerfect NormSRR207110(GSM721072)
Nuclear RNA. (cell line)
SRR207116(GSM721078)
Nuclear RNA. (cell line)
SRR444046(SRX128894)
Sample 7cDNABarcode: AF-PP-342: ACG CTC TTC C. (skin)
SRR444061(SRX128909)
Sample 19cDNABarcode: AF-PP-341: ACG CTC TTC . (skin)
SRR444049(SRX128897)
Sample 9cDNABarcode: AF-PP-334: ACG CTC TTC C. (skin)
SRR207115(GSM721077)
XRN1&2 knockdown. (XRN1/XRN2 cell line)
SRR444053(SRX128901)
Sample 13cDNABarcode: AF-PP-341: ACG CTC TTC . (skin)
SRR107296(GSM677703)
18-30nt fraction of small RNA. (cell line)
SRR330916(SRX091754)
tissue: normal skindisease state: normal. (skin)
SRR330921(SRX091759)
tissue: normal skindisease state: normal. (skin)
SRR326279(GSM769509)
cytoplasmic fraction was isolated using PARIS. (cell line)
SRR060168(GSM565978)
5-8F_nucleus. (cell line)
SRR330908(SRX091746)
tissue: normal skindisease state: normal. (skin)
SRR444059(SRX128907)
Sample 17cDNABarcode: AF-PP-339: ACG CTC TTC . (skin)
SRR330922(SRX091760)
tissue: normal skindisease state: normal. (skin)
SRR444057(SRX128905)
Sample 15cDNABarcode: AF-PP-334: ACG CTC TTC . (skin)
SRR039616(GSM531979)
HBV(+) Distal Tissue Sample 1. (liver)
SRR029054(GSM402329)
MCF7_smallRNAseq. (cell line)
SRR040028(GSM532913)
G026N. (cervix)
SRR330863(SRX091701)
tissue: skin psoriatic involveddisease state:. (skin)
SRR037937(GSM510475)
293cand2. (cell line)
SRR330897(SRX091735)
tissue: skin psoriatic uninvolveddisease stat. (skin)
TAX577739(Rovira)
total RNA. (breast)
SRR326280(GSM769510)
total cell content of unperturbed cells was s. (cell line)
SRR330890(SRX091728)
tissue: skin psoriatic uninvolveddisease stat. (skin)
SRR330885(SRX091723)
tissue: skin psoriatic uninvolveddisease stat. (skin)
SRR330884(SRX091722)
tissue: skin psoriatic uninvolveddisease stat. (skin)
SRR189784SRR330912(SRX091750)
tissue: normal skindisease state: normal. (skin)
SRR039615(GSM531978)
Severe Chronic Hepatitis B Liver Tissue. (liver)
SRR207111(GSM721073)
Whole cell RNA. (cell line)
SRR330907(SRX091745)
tissue: normal skindisease state: normal. (skin)
SRR040016(GSM532901)
G645N. (cervix)
SRR330911(SRX091749)
tissue: normal skindisease state: normal. (skin)
SRR330904(SRX091742)
tissue: normal skindisease state: normal. (skin)
SRR039617(GSM531980)
HBV(+) Adjacent Tissue Sample 1. (liver)
TAX577742(Rovira)
total RNA. (breast)
TAX577579(Rovira)
total RNA. (breast)
SRR330902(SRX091740)
tissue: skin psoriatic uninvolveddisease stat. (skin)
TAX577744(Rovira)
total RNA. (breast)
SRR330869(SRX091707)
tissue: skin psoriatic involveddisease state:. (skin)
SRR326282(GSM769512)
"Dicer mRNA was knocked down using siDicer, t. (cell line)
SRR330893(SRX091731)
tissue: skin psoriatic uninvolveddisease stat. (skin)
TAX577745(Rovira)
total RNA. (breast)
TAX577743(Rovira)
total RNA. (breast)
SRR444058(SRX128906)
Sample 16cDNABarcode: AF-PP-335: ACG CTC TTC . (skin)
SRR330905(SRX091743)
tissue: normal skindisease state: normal. (skin)
SRR444045(SRX128893)
Sample 6cDNABarcode: AF-PP-341: ACG CTC TTC C. (skin)
SRR330913(SRX091751)
tissue: normal skindisease state: normal. (skin)
SRR330910(SRX091748)
tissue: normal skindisease state: normal. (skin)
SRR330903(SRX091741)
tissue: skin psoriatic uninvolveddisease stat. (skin)
SRR330896(SRX091734)
tissue: skin psoriatic uninvolveddisease stat. (skin)
SRR330874(SRX091712)
tissue: skin psoriatic involveddisease state:. (skin)
SRR444060(SRX128908)
Sample 18cDNABarcode: AF-PP-340: ACG CTC TTC . (skin)
SRR330915(SRX091753)
tissue: normal skindisease state: normal. (skin)
SRR330876(SRX091714)
tissue: skin psoriatic involveddisease state:. (skin)
SRR330895(SRX091733)
tissue: skin psoriatic uninvolveddisease stat. (skin)
SRR330889(SRX091727)
tissue: skin psoriatic uninvolveddisease stat. (skin)
DRR001488(DRX001042)
"Hela short nuclear cell fraction, LNA(+)". (hela)
SRR191605(GSM715715)
76genomic small RNA (size selected RNA from t. (breast)
TAX577580(Rovira)
total RNA. (breast)
SRR330879(SRX091717)
tissue: skin psoriatic involveddisease state:. (skin)
SRR191552(GSM715662)
42genomic small RNA (size selected RNA from t. (breast)
SRR330881(SRX091719)
tissue: skin psoriatic uninvolveddisease stat. (skin)
SRR191587(GSM715697)
50genomic small RNA (size selected RNA from t. (breast)
SRR040019(GSM532904)
G701T. (cervix)
SRR330892(SRX091730)
tissue: skin psoriatic uninvolveddisease stat. (skin)
SRR553575(SRX182781)
source: Kidney. (Kidney)
SRR040037(GSM532922)
G243T. (cervix)
SRR039190(GSM494809)
PBMCs were isolated by ficoll gradient from t. (blood)
GSM450601(GSM450601)
miRNA sequencing raw reads from post-mortem s. (brain)
SRR207112(GSM721074)
RRP40 knockdown. (RRP40 cell line)
SRR039618(GSM531981)
HBV(+) Side Tissue Sample 1. (liver)
SRR553573(SRX182779)
source: Cerebellum. (Cerebellum)
SRR330864(SRX091702)
tissue: skin psoriatic involveddisease state:. (skin)
TAX577740(Rovira)
total RNA. (breast)
SRR191616(GSM715726)
103genomic small RNA (size selected RNA from . (breast)
SRR033721(GSM497066)
Ly3 cell line (Ly3). (B cell)
SRR029128(GSM416757)
H520. (cell line)
SRR040008(GSM532893)
G727N. (cervix)
SRR191610(GSM715720)
195genomic small RNA (size selected RNA from . (breast)
SRR444048(SRX128896)
Sample 8cDNABarcode: AF-PP-333: ACG CTC TTC C. (skin)
SRR039612(GSM531975)
Human Normal Liver Tissue Sample 2. (liver)
SRR039636(GSM518473)
THP1_cyto_sRNAs. (cell line)
SRR094132(GSM651908)
small RNA(18-35nt)small RNA deep sequencing o. (uterus)
SRR040025(GSM532910)
G613T. (cervix)
SRR191551(GSM715661)
32genomic small RNA (size selected RNA from t. (breast)
SRR330861(SRX091699)
tissue: skin psoriatic involveddisease state:. (skin)
SRR444047(SRX128895)
Sample 27_1cDNABarcode: AF-PP-343: ACG CTC TT. (skin)
SRR330862(SRX091700)
tissue: skin psoriatic involveddisease state:. (skin)
SRR444051(SRX128899)
Sample 11cDNABarcode: AF-PP-339: ACG CTC TTC . (skin)
SRR191600(GSM715710)
90genomic small RNA (size selected RNA from t. (breast)
SRR029130(GSM416759)
DLD2. (cell line)
SRR330858(SRX091696)
tissue: skin psoriatic involveddisease state:. (skin)
TAX577589(Rovira)
total RNA. (breast)
TAX577738(Rovira)
total RNA. (breast)
TAX577453(Rovira)
total RNA. (breast)
SRR330866(SRX091704)
tissue: skin psoriatic involveddisease state:. (skin)
SRR191562(GSM715672)
82genomic small RNA (size selected RNA from t. (breast)
SRR033729(GSM497074)
splenic MZL (Splenic414). (B cell)
SRR037933(GSM510471)
293cand4_rep2. (cell line)
SRR444044(SRX128892)
Sample 5cDNABarcode: AF-PP-340: ACG CTC TTC C. (skin)
SRR553572(SRX182778)
source: Frontal Cortex. (Frontal Cortex)
SRR330872(SRX091710)
tissue: skin psoriatic involveddisease state:. (skin)
SRR330865(SRX091703)
tissue: skin psoriatic involveddisease state:. (skin)
SRR330873(SRX091711)
tissue: skin psoriatic involveddisease state:. (skin)
SRR107297(GSM677704)
18-30nt fraction of small RNA. (cell line)
DRR000557(DRX000315)
"THP-1 whole cell RNA, after 3 day treatment . (cell line)
DRR000556(DRX000314)
"THP-1 whole cell RNA, after 3 day treatment . (cell line)
SRR314796(SRX084354)
"Total RNA, fractionated (15-30nt)". (cell line)
SRR330875(SRX091713)
tissue: skin psoriatic involveddisease state:. (skin)
SRR444052(SRX128900)
Sample 12cDNABarcode: AF-PP-340: ACG CTC TTC . (skin)
SRR330901(SRX091739)
tissue: skin psoriatic uninvolveddisease stat. (skin)
SRR330868(SRX091706)
tissue: skin psoriatic involveddisease state:. (skin)
SRR330870(SRX091708)
tissue: skin psoriatic involveddisease state:. (skin)
SRR444054(SRX128902)
Sample 14cDNABarcode: AF-PP-342: ACG CTC TTC . (skin)
SRR330920(SRX091758)
tissue: normal skindisease state: normal. (skin)
SRR330886(SRX091724)
tissue: skin psoriatic uninvolveddisease stat. (skin)
SRR095854(SRX039177)
"miRNA were isolated from FirstChoice Human B. (brain)
SRR342894(SRX096790)
small RNA seq of Right atrial tissue. (heart)
SRR343337
................................................AGGTGAGGGTCCGGACCGAG......................................................................................................................................................................................20119.0019.006.0010.00---1.00--------------------------------------------------------------------------------------------1.001.00---------------------
................................................AGGTGAGGGTCCGGACCG........................................................................................................................................................................................18119.0019.009.00----3.00-----1.00-----2.00---2.00-----------1.00--------------------------1.00------------------------------------------------------------
.............................................ACCAGGTGAGGGTCCGGA...........................................................................................................................................................................................18114.0014.007.00----------1.00---------1.00--------------1.00-----2.00-------------------1.00---------------1.00------------------------------------------
.........................................................................GGCCCGGGCTGGGGAGAGC..............................................................................................................................................................1918.008.008.00------------------------------------------------------------------------------------------------------------------------
.......................................................GGTCCGGACCGAGCAGGG.................................................................................................................................................................................1816.006.006.00------------------------------------------------------------------------------------------------------------------------
........................................................GTCCGGACCGAGCAGGGGGC..............................................................................................................................................................................2016.006.00-3.00---3.00-------------------------------------------------------------------------------------------------------------------
.......................................GCCTTGACCAGGTGAGGGTC...............................................................................................................................................................................................2015.005.004.00------------------------------------------------------------------------------------------1.00-----------------------------
..........................................................................GCCCGGGCTGGGGAGAGC..............................................................................................................................................................1815.005.004.00----------------------1.00-------------------------------------------------------------------------------------------------
..................................................GTGAGGGTCCGGACCGAG......................................................................................................................................................................................1814.004.00----------------1.00--------------------------1.00----------------------1.00--------1.00---------------------------------------------
...............................................CAGGTGAGGGTCCGGAC..........................................................................................................................................................................................1713.003.00--------------1.00----------1.00--1.00--------------------------------------------------------------------------------------------
.........................................................TCCGGACCGAGCAGGGGGC..............................................................................................................................................................................1913.003.001.001.00---------------------------------------1.00-------------------------------------------------------------------------------
.............................................................................CGGGCTGGGGAGAGCCGGC..........................................................................................................................................................1913.003.003.00------------------------------------------------------------------------------------------------------------------------
.........................................CTTGACCAGGTGAGGGTC...............................................................................................................................................................................................1813.003.00--------------------------------2.00------------------1.00---------------------------------------------------------------------
.......................................................GGTCCGGACCGAGCAGGGGGC..............................................................................................................................................................................2113.003.00-2.00--------------------------------------------------------------------------------1.00--------------------------------------
................................................AGGTGAGGGTCCGGACCGA.......................................................................................................................................................................................1913.003.00-1.00---------------------------2.00-------------------------------------------------------------------------------------------
..........................................................CCGGACCGAGCAGGGGGCC.............................................................................................................................................................................1913.003.00--------------1.00-1.00-------------------------------1.00------------------------------------------------------------------------
................................................AGGTGAGGGTCCGGACCGAGC.....................................................................................................................................................................................2112.002.00-----2.00-------------------------------------------------------------------------------------------------------------------
.........................................CTTGACCAGGTGAGGGTCCG.............................................................................................................................................................................................2012.002.00------------------1.00---------------------------------------------------------1.00--------------------------------------------
.........................................................TCCGGACCGAGCAGGGGG...............................................................................................................................................................................1812.002.00-------------------------------------1.00----------------------------------1.00------------------------------------------------
.....................................................AGGGTCCGGACCGAGCAGGG.................................................................................................................................................................................2012.002.00-2.00-----------------------------------------------------------------------------------------------------------------------
..........................................................CCGGACCGAGCAGGGGGC..............................................................................................................................................................................1812.002.00------------------------------1.00----------------------------------------------------------------1.00-------------------------
.......................................GCCTTGACCAGGTGAGGGTCCGG............................................................................................................................................................................................2312.002.00-2.00-----------------------------------------------------------------------------------------------------------------------
...........................................TGACCAGGTGAGGGTCCGGA...........................................................................................................................................................................................2012.002.00----------------------1.00-------------1.00------------------------------------------------------------------------------------
.......................................GCCTTGACCAGGTGAGGGTCCGGACC.........................................................................................................................................................................................2612.002.00-----------------------1.00--1.00----------------------------------------------------------------------------------------------
..........GCCTGGGAGGTTCCGAGG..............................................................................................................................................................................................................................182.000.00--------------------1.00-------------------------------------------------------------------------------1.00--------------------
.......................................................................GGGGCCCGGGCTGGGGAGA................................................................................................................................................................1912.002.002.00------------------------------------------------------------------------------------------------------------------------
....................................................................................................................CGCGTCCGGGGGGCGGCG....................................................................................................................181.000.00----------1.00--------------------------------------------------------------------------------------------------------------
..........................................................CCGGACCGAGCAGGGGGCCCGGG.........................................................................................................................................................................2311.001.00----------------------------------------------------------------------------------------------1.00--------------------------
........................................................GTCCGGACCGAGCAGGG.................................................................................................................................................................................1711.001.00-------------------------------------------------------------------------------------------------1.00-----------------------
.....................................................AGGGTCCGGACCGAGCAGG..................................................................................................................................................................................1911.001.00-1.00-----------------------------------------------------------------------------------------------------------------------
.................................................GGTGAGGGTCCGGACC.........................................................................................................................................................................................1611.001.00-----------------------1.00-------------------------------------------------------------------------------------------------
.......................................................GGTCCGGACCGAGCAGGGGG...............................................................................................................................................................................2011.001.00-1.00-----------------------------------------------------------------------------------------------------------------------
....................................................................CAGGGGGCCCGGGCTGGGGTG.................................................................................................................................................................211.000.00---------------------------1.00---------------------------------------------------------------------------------------------
..............................................CCAGGTGAGGGTCCGGAC..........................................................................................................................................................................................1811.001.00-------------------------------------------1.00-----------------------------------------------------------------------------
..............................................................................GGGCTGGGGAGAGCCGCCGC........................................................................................................................................................201.000.00----------------1.00--------------------------------------------------------------------------------------------------------
...............................................CAGGTGAGGGTCCGGACCG........................................................................................................................................................................................1911.001.00------------------------------------------------------1.00------------------------------------------------------------------
.........................................CTTGACCAGGTGAGGGT................................................................................................................................................................................................1711.001.00----------------------------------------------------------------1.00--------------------------------------------------------
...............................................................................................................................................................................................CTTCTGCGCTCCCCGCTTC........................................1911.001.00----------------------------------------------1.00--------------------------------------------------------------------------
..........GCCTGGGAGGTTCCGTGA..............................................................................................................................................................................................................................181.000.00--------------------1.00----------------------------------------------------------------------------------------------------
.......................................GCCTTGACCAGGTGAGGGTCCGGACCG........................................................................................................................................................................................2711.001.00---------------------------------------1.00---------------------------------------------------------------------------------
........................................CCTTGACCAGGTGAGGGTCCGGACCGAGC.....................................................................................................................................................................................2911.001.00----------------------------1.00--------------------------------------------------------------------------------------------
......................................CGCCTTGACCAGGTGAGG..................................................................................................................................................................................................1811.001.00------------------------------------------------------------------------------------1.00------------------------------------
.............................................ACCAGGTGAGGGTCCGGACCG........................................................................................................................................................................................2111.001.00-1.00-----------------------------------------------------------------------------------------------------------------------
....................................................GAGGGTCCGGACCGAGCAGGGGG...............................................................................................................................................................................2311.001.00---------------------------------1.00---------------------------------------------------------------------------------------
................................................AGGTGAGGGTCCGGACCGAGCAG...................................................................................................................................................................................2311.001.00--------1.00----------------------------------------------------------------------------------------------------------------
...............................................CAGGTGAGGGTCCGGACCGG.......................................................................................................................................................................................2011.001.00------------------1.00------------------------------------------------------------------------------------------------------
............................................................................................................................................................................CGCGCTTCCTCCTGTACC............................................................181.000.00--------------------------------------------------------------------------------------------1.00----------------------------
..................................................GTGAGGGTCCGGACCGAGCAGG..................................................................................................................................................................................2211.001.00-----------1.00-------------------------------------------------------------------------------------------------------------
.........................................................TCCGGACCGAGCAGGGGGCC.............................................................................................................................................................................2011.001.00-1.00-----------------------------------------------------------------------------------------------------------------------
..........................................................................GCCCGGGCTGGGGAGAGCCG............................................................................................................................................................2011.001.00--------------------------------------------------------------------------------------1.00----------------------------------
...................................................TGAGGGTCCGGACCGAGC.....................................................................................................................................................................................1811.001.00--------------------------------------------------------------------------------1.00----------------------------------------
.........................................CTTGACCAGGTGAGGGTCCGGACCGAG......................................................................................................................................................................................2711.001.00----------------------1.00--------------------------------------------------------------------------------------------------
.....................................................AGGGTCCGGACCGAGCA....................................................................................................................................................................................1711.001.00------------------------------1.00------------------------------------------------------------------------------------------
...........................................TGACCAGGTGAGGGTCCGGACCGAGC.....................................................................................................................................................................................2611.001.00--------------------------------------------1.00----------------------------------------------------------------------------
..........................................................CCGGACCGAGCAGGGG................................................................................................................................................................................1611.001.00------------------------1.00------------------------------------------------------------------------------------------------
...................................................TGAGGGTCCGGACCGAGCAG...................................................................................................................................................................................2011.001.00-1.00-----------------------------------------------------------------------------------------------------------------------
.........................................CTTGACCAGGTGAGGGTCCGGACCGA.......................................................................................................................................................................................2611.001.00--------------------------------------------------------1.00----------------------------------------------------------------
.....................................CCGCCTTGACCAGGTGAGGGTCCGGACCGAGC.....................................................................................................................................................................................3211.001.00--------------------------------------1.00----------------------------------------------------------------------------------
................................................AGGTGAGGGTCCGGACCGAGCAGGGGGCC.............................................................................................................................................................................2911.001.00------------1.00------------------------------------------------------------------------------------------------------------
......................................CGCCTTGACCAGGTGAGGGTCCGGACCGA.......................................................................................................................................................................................2911.001.00---------------------------------------1.00---------------------------------------------------------------------------------
..................................................GTGAGGGTCCGGACCGAGCAG...................................................................................................................................................................................2111.001.00-----------1.00-------------------------------------------------------------------------------------------------------------
.....................................................AGGGTCCGGACCGAGCAGGGGG...............................................................................................................................................................................2211.001.00-1.00-----------------------------------------------------------------------------------------------------------------------
..................................................GTGAGGGTCCGGACCG........................................................................................................................................................................................1611.001.00-------------------------------------------------------------------------1.00-----------------------------------------------
.................................................GGTGAGGGTCCGGACCGA.......................................................................................................................................................................................1811.001.00-----------------1.00-------------------------------------------------------------------------------------------------------
..............................................CCAGGTGAGGGTCCGGACA.........................................................................................................................................................................................1911.001.00--------------------------------------------1.00----------------------------------------------------------------------------
.........................................CTTGACCAGGTGAGGGTCCGGACC.........................................................................................................................................................................................2411.001.00--------------------------1.00----------------------------------------------------------------------------------------------
....................................................................................................................................................TCCTGCGTCCTTCCCTCACCA.................................................................................211.000.00---------------------------1.00---------------------------------------------------------------------------------------------
.............................................ACCAGGTGAGGGTCCGGAC..........................................................................................................................................................................................1911.001.00-----------------------------------1.00-------------------------------------------------------------------------------------
........................................................................................................................................................................................................TCCCCGCTTCCCACCGAGC...............................1911.001.00----------------------------------------1.00--------------------------------------------------------------------------------
.........................................CTTGACCAGGTGAGGGTCCGGAC..........................................................................................................................................................................................2311.001.00-------------------------------------1.00-----------------------------------------------------------------------------------
.....................................CCGCCTTGACCAGGTGAGGGTCCGGACC.........................................................................................................................................................................................2811.001.00----------------------1.00--------------------------------------------------------------------------------------------------
..........................................................................GCCCGGGCTGGGGAGAGCCGGCGGAGC.....................................................................................................................................................2711.001.00-1.00-----------------------------------------------------------------------------------------------------------------------
..............................................CCAGGTGAGGGTCCGGACCG........................................................................................................................................................................................2011.001.00-1.00-----------------------------------------------------------------------------------------------------------------------
........................................CCTTGACCAGGTGAGGGTCCGGACCGAGCAGGGG................................................................................................................................................................................3411.001.00---------1.00---------------------------------------------------------------------------------------------------------------
.......................................GCCTTGACCAGGTGAGGGTCCGGAC..........................................................................................................................................................................................2511.001.00---------------------------------------------------------------1.00---------------------------------------------------------
...............................CCGCTTCCGCCTTGACCAGGT......................................................................................................................................................................................................2111.001.00--------------------------------------------------------------------------1.00----------------------------------------------
..........GCCTGGGAGGTTCCGTGG..............................................................................................................................................................................................................................181.000.00--------------------1.00----------------------------------------------------------------------------------------------------
...............................CCGCTTCCGCCTTGACCAG........................................................................................................................................................................................................1911.001.00-----------------------------------------------------------1.00-------------------------------------------------------------
................................................AGGTGAGGGTCCGGACC.........................................................................................................................................................................................1711.001.00-----------------------------------------------------------------------1.00-------------------------------------------------
...................................................................GCAGGGGGCCCGGGCCACC....................................................................................................................................................................191.000.00------------------1.00------------------------------------------------------------------------------------------------------
........................................CCTTGACCAGGTGAG...................................................................................................................................................................................................1560.170.17----------------------------------------------------------------------------------------------------------------------0.17--

Antisense strand
AGCCCAGGCAGCCTGGGAGGTTCCGCAGTCGCCGCTTCCGCCTTGACCAGGTGAGGGTCCGGACCGAGCAGGGGGCCCGGGCTGGGGAGAGCCGGCGGAGCAGCCGTCGCTGGGGGCGCGTCCGGGGGGCGCTGGGCCTGTCCTCTTCTCCTGCGTCCTTCCCTCCCGCAGCCGCGCTTCCTCCTGTCTCCCTTCTGCGCTCCCCGCTTCCCACCGAGCGCGCAGGGCCGGGTCCCCCAGGGTCCTGGGC
..............................................((......))..((((.((.(((.((....))..))).)).....))))...........................................................................................................................................................
............................................45.................................................96.........................................................................................................................................................
SizePerfect hitTotal NormPerfect NormSRR207110(GSM721072)
Nuclear RNA. (cell line)
SRR207116(GSM721078)
Nuclear RNA. (cell line)
SRR444046(SRX128894)
Sample 7cDNABarcode: AF-PP-342: ACG CTC TTC C. (skin)
SRR444061(SRX128909)
Sample 19cDNABarcode: AF-PP-341: ACG CTC TTC . (skin)
SRR444049(SRX128897)
Sample 9cDNABarcode: AF-PP-334: ACG CTC TTC C. (skin)
SRR207115(GSM721077)
XRN1&2 knockdown. (XRN1/XRN2 cell line)
SRR444053(SRX128901)
Sample 13cDNABarcode: AF-PP-341: ACG CTC TTC . (skin)
SRR107296(GSM677703)
18-30nt fraction of small RNA. (cell line)
SRR330916(SRX091754)
tissue: normal skindisease state: normal. (skin)
SRR330921(SRX091759)
tissue: normal skindisease state: normal. (skin)
SRR326279(GSM769509)
cytoplasmic fraction was isolated using PARIS. (cell line)
SRR060168(GSM565978)
5-8F_nucleus. (cell line)
SRR330908(SRX091746)
tissue: normal skindisease state: normal. (skin)
SRR444059(SRX128907)
Sample 17cDNABarcode: AF-PP-339: ACG CTC TTC . (skin)
SRR330922(SRX091760)
tissue: normal skindisease state: normal. (skin)
SRR444057(SRX128905)
Sample 15cDNABarcode: AF-PP-334: ACG CTC TTC . (skin)
SRR039616(GSM531979)
HBV(+) Distal Tissue Sample 1. (liver)
SRR029054(GSM402329)
MCF7_smallRNAseq. (cell line)
SRR040028(GSM532913)
G026N. (cervix)
SRR330863(SRX091701)
tissue: skin psoriatic involveddisease state:. (skin)
SRR037937(GSM510475)
293cand2. (cell line)
SRR330897(SRX091735)
tissue: skin psoriatic uninvolveddisease stat. (skin)
TAX577739(Rovira)
total RNA. (breast)
SRR326280(GSM769510)
total cell content of unperturbed cells was s. (cell line)
SRR330890(SRX091728)
tissue: skin psoriatic uninvolveddisease stat. (skin)
SRR330885(SRX091723)
tissue: skin psoriatic uninvolveddisease stat. (skin)
SRR330884(SRX091722)
tissue: skin psoriatic uninvolveddisease stat. (skin)
SRR189784SRR330912(SRX091750)
tissue: normal skindisease state: normal. (skin)
SRR039615(GSM531978)
Severe Chronic Hepatitis B Liver Tissue. (liver)
SRR207111(GSM721073)
Whole cell RNA. (cell line)
SRR330907(SRX091745)
tissue: normal skindisease state: normal. (skin)
SRR040016(GSM532901)
G645N. (cervix)
SRR330911(SRX091749)
tissue: normal skindisease state: normal. (skin)
SRR330904(SRX091742)
tissue: normal skindisease state: normal. (skin)
SRR039617(GSM531980)
HBV(+) Adjacent Tissue Sample 1. (liver)
TAX577742(Rovira)
total RNA. (breast)
TAX577579(Rovira)
total RNA. (breast)
SRR330902(SRX091740)
tissue: skin psoriatic uninvolveddisease stat. (skin)
TAX577744(Rovira)
total RNA. (breast)
SRR330869(SRX091707)
tissue: skin psoriatic involveddisease state:. (skin)
SRR326282(GSM769512)
"Dicer mRNA was knocked down using siDicer, t. (cell line)
SRR330893(SRX091731)
tissue: skin psoriatic uninvolveddisease stat. (skin)
TAX577745(Rovira)
total RNA. (breast)
TAX577743(Rovira)
total RNA. (breast)
SRR444058(SRX128906)
Sample 16cDNABarcode: AF-PP-335: ACG CTC TTC . (skin)
SRR330905(SRX091743)
tissue: normal skindisease state: normal. (skin)
SRR444045(SRX128893)
Sample 6cDNABarcode: AF-PP-341: ACG CTC TTC C. (skin)
SRR330913(SRX091751)
tissue: normal skindisease state: normal. (skin)
SRR330910(SRX091748)
tissue: normal skindisease state: normal. (skin)
SRR330903(SRX091741)
tissue: skin psoriatic uninvolveddisease stat. (skin)
SRR330896(SRX091734)
tissue: skin psoriatic uninvolveddisease stat. (skin)
SRR330874(SRX091712)
tissue: skin psoriatic involveddisease state:. (skin)
SRR444060(SRX128908)
Sample 18cDNABarcode: AF-PP-340: ACG CTC TTC . (skin)
SRR330915(SRX091753)
tissue: normal skindisease state: normal. (skin)
SRR330876(SRX091714)
tissue: skin psoriatic involveddisease state:. (skin)
SRR330895(SRX091733)
tissue: skin psoriatic uninvolveddisease stat. (skin)
SRR330889(SRX091727)
tissue: skin psoriatic uninvolveddisease stat. (skin)
DRR001488(DRX001042)
"Hela short nuclear cell fraction, LNA(+)". (hela)
SRR191605(GSM715715)
76genomic small RNA (size selected RNA from t. (breast)
TAX577580(Rovira)
total RNA. (breast)
SRR330879(SRX091717)
tissue: skin psoriatic involveddisease state:. (skin)
SRR191552(GSM715662)
42genomic small RNA (size selected RNA from t. (breast)
SRR330881(SRX091719)
tissue: skin psoriatic uninvolveddisease stat. (skin)
SRR191587(GSM715697)
50genomic small RNA (size selected RNA from t. (breast)
SRR040019(GSM532904)
G701T. (cervix)
SRR330892(SRX091730)
tissue: skin psoriatic uninvolveddisease stat. (skin)
SRR553575(SRX182781)
source: Kidney. (Kidney)
SRR040037(GSM532922)
G243T. (cervix)
SRR039190(GSM494809)
PBMCs were isolated by ficoll gradient from t. (blood)
GSM450601(GSM450601)
miRNA sequencing raw reads from post-mortem s. (brain)
SRR207112(GSM721074)
RRP40 knockdown. (RRP40 cell line)
SRR039618(GSM531981)
HBV(+) Side Tissue Sample 1. (liver)
SRR553573(SRX182779)
source: Cerebellum. (Cerebellum)
SRR330864(SRX091702)
tissue: skin psoriatic involveddisease state:. (skin)
TAX577740(Rovira)
total RNA. (breast)
SRR191616(GSM715726)
103genomic small RNA (size selected RNA from . (breast)
SRR033721(GSM497066)
Ly3 cell line (Ly3). (B cell)
SRR029128(GSM416757)
H520. (cell line)
SRR040008(GSM532893)
G727N. (cervix)
SRR191610(GSM715720)
195genomic small RNA (size selected RNA from . (breast)
SRR444048(SRX128896)
Sample 8cDNABarcode: AF-PP-333: ACG CTC TTC C. (skin)
SRR039612(GSM531975)
Human Normal Liver Tissue Sample 2. (liver)
SRR039636(GSM518473)
THP1_cyto_sRNAs. (cell line)
SRR094132(GSM651908)
small RNA(18-35nt)small RNA deep sequencing o. (uterus)
SRR040025(GSM532910)
G613T. (cervix)
SRR191551(GSM715661)
32genomic small RNA (size selected RNA from t. (breast)
SRR330861(SRX091699)
tissue: skin psoriatic involveddisease state:. (skin)
SRR444047(SRX128895)
Sample 27_1cDNABarcode: AF-PP-343: ACG CTC TT. (skin)
SRR330862(SRX091700)
tissue: skin psoriatic involveddisease state:. (skin)
SRR444051(SRX128899)
Sample 11cDNABarcode: AF-PP-339: ACG CTC TTC . (skin)
SRR191600(GSM715710)
90genomic small RNA (size selected RNA from t. (breast)
SRR029130(GSM416759)
DLD2. (cell line)
SRR330858(SRX091696)
tissue: skin psoriatic involveddisease state:. (skin)
TAX577589(Rovira)
total RNA. (breast)
TAX577738(Rovira)
total RNA. (breast)
TAX577453(Rovira)
total RNA. (breast)
SRR330866(SRX091704)
tissue: skin psoriatic involveddisease state:. (skin)
SRR191562(GSM715672)
82genomic small RNA (size selected RNA from t. (breast)
SRR033729(GSM497074)
splenic MZL (Splenic414). (B cell)
SRR037933(GSM510471)
293cand4_rep2. (cell line)
SRR444044(SRX128892)
Sample 5cDNABarcode: AF-PP-340: ACG CTC TTC C. (skin)
SRR553572(SRX182778)
source: Frontal Cortex. (Frontal Cortex)
SRR330872(SRX091710)
tissue: skin psoriatic involveddisease state:. (skin)
SRR330865(SRX091703)
tissue: skin psoriatic involveddisease state:. (skin)
SRR330873(SRX091711)
tissue: skin psoriatic involveddisease state:. (skin)
SRR107297(GSM677704)
18-30nt fraction of small RNA. (cell line)
DRR000557(DRX000315)
"THP-1 whole cell RNA, after 3 day treatment . (cell line)
DRR000556(DRX000314)
"THP-1 whole cell RNA, after 3 day treatment . (cell line)
SRR314796(SRX084354)
"Total RNA, fractionated (15-30nt)". (cell line)
SRR330875(SRX091713)
tissue: skin psoriatic involveddisease state:. (skin)
SRR444052(SRX128900)
Sample 12cDNABarcode: AF-PP-340: ACG CTC TTC . (skin)
SRR330901(SRX091739)
tissue: skin psoriatic uninvolveddisease stat. (skin)
SRR330868(SRX091706)
tissue: skin psoriatic involveddisease state:. (skin)
SRR330870(SRX091708)
tissue: skin psoriatic involveddisease state:. (skin)
SRR444054(SRX128902)
Sample 14cDNABarcode: AF-PP-342: ACG CTC TTC . (skin)
SRR330920(SRX091758)
tissue: normal skindisease state: normal. (skin)
SRR330886(SRX091724)
tissue: skin psoriatic uninvolveddisease stat. (skin)
SRR095854(SRX039177)
"miRNA were isolated from FirstChoice Human B. (brain)
SRR342894(SRX096790)
small RNA seq of Right atrial tissue. (heart)
SRR343337
..............................................................................................................CCCGGACGCGCCCCCA............................................................................................................................ 16162.0062.00--13.0011.004.00-4.001.002.002.001.00-2.001.00-3.00---2.00-----1.00-----2.00--1.00------1.00----------1.001.00-1.00-1.00---1.00-------------------1.00-----1.001.00-1.00--1.00-------1.00-------------------
..............................................................................................................CCGGACGCGCCCCCA............................................................................................................................. 15250.0050.00--3.503.504.00-4.004.501.501.001.00-0.501.500.500.50---1.00----1.500.500.50-------1.00---1.00-1.00----1.500.501.500.501.501.500.500.500.500.500.50---------------------------------1.00-------------0.500.500.500.500.500.50-0.500.500.500.500.500.500.500.50---
.......................................................................................................................................CAGGAGAAGAGGACAGGC................................................................................................. 1824.004.004.00------------------------------------------------------------------------------------------------------------------------
..............................................................................................................CCCCGGACGCGCCCCCA........................................................................................................................... 1713.003.00----1.00--------1.00----------------------------------------------------------------------------------1.00------------------------
...............................................................................................................CCCGGACGCGCCCCC............................................................................................................................ 1541.501.50---0.25--0.25--------------------------------------0.25--------------------------------------------------------0.25---------------0.25-0.25
................................................................................................................................................................CCCTCCCGCAGCCGCGGGC....................................................................... 191.000.00-------------------------------------------------------------------1.00-----------------------------------------------------
......GGCAGCCTGGGAGGTGCG.................................................................................................................................................................................................................................. 181.000.00-------------------------------------------------------------------------------1.00-----------------------------------------
......................................................................................................................................GAAGGACGCAGGAGAAGAGGACAGGCC......................................................................................... 2711.001.00---------------------------------------------------------------------1.00---------------------------------------------------
..............................................................................................................CCCCCGGACGCGCCCCCA.......................................................................................................................... 1811.001.00-----------------------------------------------------------------------------1.00-------------------------------------------
.....................................................................................................................................................................................TCCTGTCTCCCTTCTGCGGA................................................. 201.000.00-----------------------------------1.00-------------------------------------------------------------------------------------
................................................................................................................................................................CCCTCCCGCAGCCGCGGGT....................................................................... 191.000.00-------------------------------------------------------------------------------------1.00-----------------------------------
.............................................................................................................................................CCTCTTCTCCTGCGTCGCG.......................................................................................... 191.000.00--------------------------------------------------------------------1.00----------------------------------------------------
.........................................................................................................................................CTGTCCTCTTCTCCTTTA............................................................................................... 181.000.00-----------------------------------------------------------------------------------1.00-------------------------------------
...............................................................................................................GGGGGCGCGTCCGGGGGC......................................................................................................................... 181.000.00--1.00----------------------------------------------------------------------------------------------------------------------
..............CGGCGACTGCGGAACCTCCC........................................................................................................................................................................................................................ 2011.001.00--------------1.00----------------------------------------------------------------------------------------------------------
...............................................................CCGAGCAGGGGGCCCGCT......................................................................................................................................................................... 181.000.00----------------------------------------------------------------------1.00--------------------------------------------------
................................................................................................................................................................................................................TCCCACCGAGCGCGCGGG........................ 181.000.00-----------------------------------------------------------------1.00-------------------------------------------------------
...................GTTCCGCAGTCGCCGA....................................................................................................................................................................................................................... 161.000.00----------------------------------------------------------1.00--------------------------------------------------------------
..................................................................................................................................................................................................................................GCCGGGTCCCCCAGGGA....... 171.000.00----------1.00--------------------------------------------------------------------------------------------------------------
..............................................................................................................TGGGGGCGCGTCCGGATC.......................................................................................................................... 180.500.00-------------------------------------------------------------------------------------------------------------0.50-----------
..............................................................................................................TGGGGGCGCGTCCGGA............................................................................................................................ 160.500.00-------0.50-----------------------------------------------------------------------------------------------------------------
.............................................................................................................................................................................................................CGCTCGGTGGGAAGC.............................. 1520.500.50------------------------------------------------------------------------------------------------------0.50------------------
....................................................................................TCCGCCGGCTCTCCC....................................................................................................................................................... 1520.500.50--------------------------------------------------------0.50----------------------------------------------------------------
.......................................................................................................................................AGGAGAAGAGGACAGGC.................................................................................................. 1740.250.25-----------------------------------------------------------------------------------------------------------------------0.25-