ID: uc002ggd.2_intron_18_0_chr17_7253374_f
GENE: ACAP1(19)
chr17:7253324-7253495+


(1)
AGO2.ip 		(5)
B-CELL 		(4)
BRAIN 		(7)
BREAST 		(8)
CELL-LINE 		(4)
CERVIX 		(3)
OTHER 		(1)
RRP40.ip 		(8)
SKIN 		(4)
UTERUS

Sense strand
AGTGCGGGCCGGGGCCCGCTGCACCACGCAACCATTCTTGGCCACACGGGGTAGGGATGATGGCATGGGGAGGAAGGCTGGGAGAAGTTGGGCGGCCGGCTGACCCTGGCTCTTCTCTCCAGGCTCGCCTGCCTGTTCCTGAAACGGGGAGCTGATCTGGGGGCTCGAGACT
.................................................................(((((((((..((..((...((((((....))))))...))..))..)))))))))...................................................
............................................................61...........................................................122................................................
SizePerfect hitTotal NormPerfect NormSRR387910(GSM843862)
antibody for ip: Ago2. (ago2 cell line)		SRR015363(GSM380328)
Germinal Center B cell (GC40). (B cell)		SRR387909(GSM843861)
specific-host: Homo sapienshost cell line: Su. (cell line)		SRR189784SRR094129(GSM651905)
small RNA(18-35nt)small RNA deep sequencing o. (uterus)		SRR207111(GSM721073)
Whole cell RNA. (cell line)		SRR189782TAX577742(Rovira)
total RNA. (breast)		SRR060982(GSM569186)
Human centrocyte [09-001]. (cell line)		SRR060983(GSM569187)
Human pre-germinal center B cell [09-001]. (cell line)		SRR330883(SRX091721)
tissue: skin psoriatic uninvolveddisease stat. (skin)		TAX577588(Rovira)
total RNA. (breast)		SRR033722(GSM497067)
KMS12 cell line (KMS12). (B cell)		SRR330881(SRX091719)
tissue: skin psoriatic uninvolveddisease stat. (skin)		SRR094130(GSM651906)
small RNA(18-35nt)small RNA deep sequencing o. (uterus)		SRR330892(SRX091730)
tissue: skin psoriatic uninvolveddisease stat. (skin)		SRR189787SRR040028(GSM532913)
G026N. (cervix)		SRR207112(GSM721074)
RRP40 knockdown. (RRP40 cell line)		SRR033717(GSM497062)
Mentle Cell Lymphoma (MCL112). (B cell)		GSM450609(GSM450609)
miRNA sequencing raw reads from post-mortem s. (brain)		SRR094131(GSM651907)
small RNA(18-35nt)small RNA deep sequencing o. (uterus)		SRR060984(GSM569188)
Human plasma cell [09-001]. (cell line)		SRR040036(GSM532921)
G243N. (cervix)		TAX577740(Rovira)
total RNA. (breast)		SRR191593(GSM715703)
62genomic small RNA (size selected RNA from t. (breast)		SRR033716(GSM497061)
Mentle Cell Lymphoma (MCL114). (B cell)		SRR094132(GSM651908)
small RNA(18-35nt)small RNA deep sequencing o. (uterus)		SRR040039(GSM532924)
G531T. (cervix)		SRR330896(SRX091734)
tissue: skin psoriatic uninvolveddisease stat. (skin)		SRR040022(GSM532907)
G575N. (cervix)		SRR039193(GSM494812)
HL60 cell line is derived from acute promyelo. (cell line)		GSM450608(GSM450608)
miRNA sequencing raw reads from post-mortem s. (brain)		TAX577579(Rovira)
total RNA. (breast)		GSM450602(GSM450602)
miRNA sequencing raw reads from post-mortem s. (brain)		TAX577744(Rovira)
total RNA. (breast)		SRR330915(SRX091753)
tissue: normal skindisease state: normal. (skin)		SRR033728(GSM497073)
MALT (MALT413). (B cell)		TAX577453(Rovira)
total RNA. (breast)		GSM450605(GSM450605)
miRNA sequencing raw reads from post-mortem s. (brain)		SRR330905(SRX091743)
tissue: normal skindisease state: normal. (skin)		SRR330879(SRX091717)
tissue: skin psoriatic involveddisease state:. (skin)		SRR330902(SRX091740)
tissue: skin psoriatic uninvolveddisease stat. (skin)
.................................................................TGGGGAGGAAGGCTGGGAGAAG.....................................................................................22111.0011.004.004.00----------1.00------1.00---------1.00-------------
.................................................................TGGGGAGGAAGGCTGTAT.........................................................................................183.000.00--------------1.00------------------1.001.00--------
.................................................................TGGGGAGGAAGGCTGTTTA........................................................................................193.000.00-------1.00----------1.00--------1.00---------------
.................................................................TGGGGAGGAAGGCTGTTTG........................................................................................193.000.00----1.00---------------1.00-----------------1.00----
................................................................................................................................................CGGGGAGCTGATCTGGGGGCTCG.....2313.003.00--3.00----------------------------------------
...............................................................CATGGGGAGGAAGGCTGGGAGA.......................................................................................2213.003.003.00------------------------------------------
.....................................................................GAGGAAGGCTGGGAGAAGTC...................................................................................202.000.00-----2.00-------------------------------------
.................................................................TGGGGAGGAAGGCTGTATA........................................................................................192.000.00-----------------------------------1.00---1.00---
.................................................................TGGGGAGGAAGGCTGGGAGAAA.....................................................................................2212.001.002.00------------------------------------------
.................................................................TGGGGAGGAAGGCTGTTTC........................................................................................192.000.00----1.00---------------------------1.00----------
................................................................ATGGGGAGGAAGGCTGGGAGAAGT....................................................................................2412.002.002.00------------------------------------------
....................................................................................................TGACCCTGGCTCTTCTCTCCAGT.................................................232.000.002.00------------------------------------------
.................................................................TGGGGAGGAAGGCTGTTT.........................................................................................181.000.00-----------------1.00-------------------------
.................................................................TGGGGAGGAAGGCTGGGAGA.......................................................................................2011.001.00--------1.00----------------------------------
...............................................................CATGGGGAGGAAGGCTGT...........................................................................................181.000.00----------------------------1.00--------------
....................................................................GGAGGAAGGCTGGGATAA......................................................................................181.000.00-------------------------------1.00-----------
.GTGCGGGCCGGGGCCCGGTCT......................................................................................................................................................211.000.00---1.00---------------------------------------
..TGCGGGCCGGGGCCCGGG........................................................................................................................................................181.000.00------------------------------1.00------------
.................................................................TGGGGAGGAAGGCTGTACG........................................................................................191.000.00------1.00------------------------------------
.........................................CCACACGGGGTAGGGATGATGG.............................................................................................................2211.001.00------------------------1.00------------------
.................................................................TGGGGAGGAAGGCTGTATG........................................................................................191.000.00---------------------1.00---------------------
..................................................................GGGGAGGAAGGCTGGGAGA.......................................................................................1911.001.00-------------------------------------1.00-----
.................................................................TGGGGAGGAAGGCTGTGCG........................................................................................191.000.00-----------1.00-------------------------------
..................................................GTAGGGATGATGGCATGGGG......................................................................................................2011.001.00----------------------1.00--------------------
...............................................................CATGGGGAGGAAGGCTGGGAGAAA.....................................................................................241.000.00--------------------------1.00----------------
.................................................................TGGGGAGGAAGGCTGCTGA........................................................................................191.000.00----------------1.00--------------------------
.................................................................TGGGGAGGAAGGCTGGGAGAA......................................................................................2111.001.001.00------------------------------------------
.................................................................TGGGGAGGAAGGCTGGGAAA.......................................................................................201.000.00----------1.00--------------------------------
..................................................................................................................CTCTCCAGGCTCGCCA..........................................161.000.00------------------------------------1.00------
....................................................................................................TGACCCTGGCTCTTCTCTCC....................................................2011.001.00-------------------------1.00-----------------
....................................................................................AAGTTGGGCGGCCGGAAAA.....................................................................191.000.00---------1.00---------------------------------
...................................................................GGGAGGAAGGCTGGGAGAAG.....................................................................................2020.500.50--------0.50----------------------------------
.............................................................GGCATGGGGAGGAAGGC..............................................................................................1760.330.33----------------------------------------0.170.17-
....CGGGCCGGGGCCCGC.........................................................................................................................................................1580.120.12------------------------------------------0.12

Antisense strand
AGTGCGGGCCGGGGCCCGCTGCACCACGCAACCATTCTTGGCCACACGGGGTAGGGATGATGGCATGGGGAGGAAGGCTGGGAGAAGTTGGGCGGCCGGCTGACCCTGGCTCTTCTCTCCAGGCTCGCCTGCCTGTTCCTGAAACGGGGAGCTGATCTGGGGGCTCGAGACT
.................................................................(((((((((..((..((...((((((....))))))...))..))..)))))))))...................................................
............................................................61...........................................................122................................................
SizePerfect hitTotal NormPerfect NormSRR387910(GSM843862)
antibody for ip: Ago2. (ago2 cell line)		SRR015363(GSM380328)
Germinal Center B cell (GC40). (B cell)		SRR387909(GSM843861)
specific-host: Homo sapienshost cell line: Su. (cell line)		SRR189784SRR094129(GSM651905)
small RNA(18-35nt)small RNA deep sequencing o. (uterus)		SRR207111(GSM721073)
Whole cell RNA. (cell line)		SRR189782TAX577742(Rovira)
total RNA. (breast)		SRR060982(GSM569186)
Human centrocyte [09-001]. (cell line)		SRR060983(GSM569187)
Human pre-germinal center B cell [09-001]. (cell line)		SRR330883(SRX091721)
tissue: skin psoriatic uninvolveddisease stat. (skin)		TAX577588(Rovira)
total RNA. (breast)		SRR033722(GSM497067)
KMS12 cell line (KMS12). (B cell)		SRR330881(SRX091719)
tissue: skin psoriatic uninvolveddisease stat. (skin)		SRR094130(GSM651906)
small RNA(18-35nt)small RNA deep sequencing o. (uterus)		SRR330892(SRX091730)
tissue: skin psoriatic uninvolveddisease stat. (skin)		SRR189787SRR040028(GSM532913)
G026N. (cervix)		SRR207112(GSM721074)
RRP40 knockdown. (RRP40 cell line)		SRR033717(GSM497062)
Mentle Cell Lymphoma (MCL112). (B cell)		GSM450609(GSM450609)
miRNA sequencing raw reads from post-mortem s. (brain)		SRR094131(GSM651907)
small RNA(18-35nt)small RNA deep sequencing o. (uterus)		SRR060984(GSM569188)
Human plasma cell [09-001]. (cell line)		SRR040036(GSM532921)
G243N. (cervix)		TAX577740(Rovira)
total RNA. (breast)		SRR191593(GSM715703)
62genomic small RNA (size selected RNA from t. (breast)		SRR033716(GSM497061)
Mentle Cell Lymphoma (MCL114). (B cell)		SRR094132(GSM651908)
small RNA(18-35nt)small RNA deep sequencing o. (uterus)		SRR040039(GSM532924)
G531T. (cervix)		SRR330896(SRX091734)
tissue: skin psoriatic uninvolveddisease stat. (skin)		SRR040022(GSM532907)
G575N. (cervix)		SRR039193(GSM494812)
HL60 cell line is derived from acute promyelo. (cell line)		GSM450608(GSM450608)
miRNA sequencing raw reads from post-mortem s. (brain)		TAX577579(Rovira)
total RNA. (breast)		GSM450602(GSM450602)
miRNA sequencing raw reads from post-mortem s. (brain)		TAX577744(Rovira)
total RNA. (breast)		SRR330915(SRX091753)
tissue: normal skindisease state: normal. (skin)		SRR033728(GSM497073)
MALT (MALT413). (B cell)		TAX577453(Rovira)
total RNA. (breast)		GSM450605(GSM450605)
miRNA sequencing raw reads from post-mortem s. (brain)		SRR330905(SRX091743)
tissue: normal skindisease state: normal. (skin)		SRR330879(SRX091717)
tissue: skin psoriatic involveddisease state:. (skin)		SRR330902(SRX091740)
tissue: skin psoriatic uninvolveddisease stat. (skin)
.........................................................................................................................CAGGAACAGGCAGGCGAGCC............................... 2011.001.00---------------1.00---------------------------
...........................................ACACGGGGTAGGGATGCTGT............................................................................................................. 201.000.00-------------1.00-----------------------------
...GCGGGCCGGGGCCCGCCGAG..................................................................................................................................................... 201.000.00------1.00------------------------------------
..............................................................................................GCCGGCTGACCCTGGACC............................................................ 181.000.00---1.00---------------------------------------
...............GGTTGCGTGGTGCAGCGG........................................................................................................................................... 1811.001.00-------1.00-----------------------------------
......................................................................................................ACCCTGGCTCTTCTCTAGCT.................................................. 201.000.00-----------------------1.00-------------------