ID: uc002gfy.1_intron_10_0_chr17_7219098_r
GENE: NEURL4(8)
chr17:7219048-7219644-


(1)
AGO1.ip
(3)
AGO2.ip
(6)
B-CELL
(3)
BRAIN
(8)
BREAST
(22)
CELL-LINE
(6)
CERVIX
(3)
HEART
(3)
HELA
(7)
LIVER
(3)
OTHER
(1)
RRP40.ip
(22)
SKIN
(1)
TESTES
(2)
UTERUS
(1)
XRN.ip

Sense strand
TCCGGGACCCCAAATCCCAGCGGACGCACCAGGCTCAGGTGGCGTTCCAGGTGTGTGTGCGCCCTGGCTCCTACACCCCGGGACCCCCTTCCGCTGCCCTTGGAGAACCTCCTGACCCTCACTTCAGTCCAGCCGAACTTGAGTGGGTCACTAAGGAGAAGGGGGCCACACTCCTCTGTGCCCTGCTGGTACGGGTGGAATGAGGGGTGAGACACCACTACTACAAGCACAGTCGGGCCGCGGGCCCATGGACTCTGAGTGGCGACTGCCTCCACCTCATTCCCGTGACTCGTGGCATGCGCAGGTGCTGGAGCTTGGCAGCCGCGCAGGAGCATGTAGGCAGGCTCTCAGATGTAGGTGGCAAGTGGCACAGCTCCATGTCCGGAGGCCCAGCACTCCGTCTGATGGGAGGAGTCGTGGGAGCCCAGCTCCAGGCCCTGGTACCCCTCTTCATGCACTGATTTGGGGAACATGACTCCCTTTTACTCCCCTACCCCACATCACTTAATTTATTTCCGTTTTTGTTTCTGGTTACTGTGAATCCCAGAGGAGTCTCTCCCTGTGCCCACATGAAGCTGCTTTTTCCGGGGCCACCGG
..............................................................................................................................................................................................................(((......))).........((.(((((((((...)))))...)))).))...(((....))).......................................................................................................................................................................................................................................................................................................................................
..............................................................................................................................................................................................................207.............................................................271....................................................................................................................................................................................................................................................................................................................................
SizePerfect hitTotal NormPerfect NormSRR387910(GSM843862)
antibody for ip: Ago2. (ago2 cell line)
SRR033711(GSM497056)
GCB DLBCL (GCB110). (B cell)
SRR189784SRR553572(SRX182778)
source: Frontal Cortex. (Frontal Cortex)
SRR015363(GSM380328)
Germinal Center B cell (GC40). (B cell)
SRR189780(GSM714640)
cell line: HEK293clip variant: PAR-CLIPenzyma. (cell line)
SRR189779(GSM714639)
cell line: HEK293clip variant: PAR-CLIPenzyma. (cell line)
SRR189782SRR189785SRR207116(GSM721078)
Nuclear RNA. (cell line)
SRR342894(SRX096790)
small RNA seq of Right atrial tissue. (heart)
SRR040018(GSM532903)
G701N. (cervix)
SRR207110(GSM721072)
Nuclear RNA. (cell line)
SRR039615(GSM531978)
Severe Chronic Hepatitis B Liver Tissue. (liver)
SRR553573(SRX182779)
source: Cerebellum. (Cerebellum)
SRR207115(GSM721077)
XRN1&2 knockdown. (XRN1/XRN2 cell line)
SRR330889(SRX091727)
tissue: skin psoriatic uninvolveddisease stat. (skin)
SRR039616(GSM531979)
HBV(+) Distal Tissue Sample 1. (liver)
SRR039614(GSM531977)
HBV-infected Liver Tissue. (liver)
SRR040010(GSM532895)
G529N. (cervix)
SRR039190(GSM494809)
PBMCs were isolated by ficoll gradient from t. (blood)
TAX577740(Rovira)
total RNA. (breast)
SRR444062(SRX128910)
Sample 27_3cDNABarcode: AF-PP-343: ACG CTC TT. (skin)
SRR330919(SRX091757)
tissue: normal skindisease state: normal. (skin)
SRR444047(SRX128895)
Sample 27_1cDNABarcode: AF-PP-343: ACG CTC TT. (skin)
SRR330868(SRX091706)
tissue: skin psoriatic involveddisease state:. (skin)
SRR189786SRR107296(GSM677703)
18-30nt fraction of small RNA. (cell line)
SRR037934(GSM510472)
293cand4_rep3. (cell line)
SRR039622(GSM531985)
HCV(+) Adjacent Tissue Sample. (liver)
GSM956925Ago2PAZ(GSM956925)
"cell line: HEK293 cell linepassages: 15-20ip. (ago2 cell line)
SRR040024(GSM532909)
G613N. (cervix)
SRR330859(SRX091697)
tissue: skin psoriatic involveddisease state:. (skin)
SRR330880(SRX091718)
tissue: skin psoriatic involveddisease state:. (skin)
RoviraIPAgo2(Rovira)
total RNA. (ago2 breast)
DRR001488(DRX001042)
"Hela short nuclear cell fraction, LNA(+)". (hela)
SRR033719(GSM497064)
6hr Activated B cell line (ABC158). (B cell)
SRR330865(SRX091703)
tissue: skin psoriatic involveddisease state:. (skin)
GSM450606(GSM450606)
miRNA sequencing raw reads from post-mortem s. (brain)
SRR330905(SRX091743)
tissue: normal skindisease state: normal. (skin)
GSM1105748AGO1(GSM1105748)
small RNA sequencing data. (ago1 hela)
SRR094129(GSM651905)
small RNA(18-35nt)small RNA deep sequencing o. (uterus)
SRR444068(SRX128916)
Sample 25cDNABarcode: AF-PP-341: ACG CTC TTC . (cell line)
SRR330908(SRX091746)
tissue: normal skindisease state: normal. (skin)
SRR040013(GSM532898)
G648T. (cervix)
SRR444065(SRX128913)
Sample 22cDNABarcode: AF-PP-335: ACG CTC TTC . (cell line)
SRR444041(SRX128889)
Sample 2cDNABarcode: AF-PP-334: ACG CTC TTC C. (skin)
SRR207112(GSM721074)
RRP40 knockdown. (RRP40 cell line)
SRR039618(GSM531981)
HBV(+) Side Tissue Sample 1. (liver)
SRR330885(SRX091723)
tissue: skin psoriatic uninvolveddisease stat. (skin)
SRR094131(GSM651907)
small RNA(18-35nt)small RNA deep sequencing o. (uterus)
SRR037937(GSM510475)
293cand2. (cell line)
SRR330911(SRX091749)
tissue: normal skindisease state: normal. (skin)
SRR033726(GSM497071)
Mututated CLL (CLLM633). (B cell)
SRR039612(GSM531975)
Human Normal Liver Tissue Sample 2. (liver)
SRR095854(SRX039177)
"miRNA were isolated from FirstChoice Human B. (brain)
TAX577739(Rovira)
total RNA. (breast)
SRR040039(GSM532924)
G531T. (cervix)
SRR015447(SRR015447)
nuclear small RNAs. (breast)
TAX577590(Rovira)
total RNA. (breast)
SRR040014(GSM532899)
G623N. (cervix)
GSM359178(GSM359178)
hela_nucl_t. (hela)
SRR444057(SRX128905)
Sample 15cDNABarcode: AF-PP-334: ACG CTC TTC . (skin)
SRR033720(GSM497065)
EBV activated B cell line (EBV159). (B cell)
GSM450608(GSM450608)
miRNA sequencing raw reads from post-mortem s. (brain)
SRR553576(SRX182782)
source: Testis. (testes)
TAX577579(Rovira)
total RNA. (breast)
SRR038857(GSM458540)
D20. (cell line)
SRR330894(SRX091732)
tissue: skin psoriatic uninvolveddisease stat. (skin)
SRR060168(GSM565978)
5-8F_nucleus. (cell line)
SRR060169(GSM565979)
5-8F_cytoplasm. (cell line)
SRR330915(SRX091753)
tissue: normal skindisease state: normal. (skin)
SRR326282(GSM769512)
"Dicer mRNA was knocked down using siDicer, t. (cell line)
SRR342895(SRX096791)
small RNA seq of Left atrial tissue. (heart)
SRR189776(GSM714636)
cell line: HEK293clip variant: CLIPenzymatic . (cell line)
SRR330893(SRX091731)
tissue: skin psoriatic uninvolveddisease stat. (skin)
SRR326280(GSM769510)
total cell content of unperturbed cells was s. (cell line)
SRR330866(SRX091704)
tissue: skin psoriatic involveddisease state:. (skin)
SRR033723(GSM497068)
L1236 cell line (L1236). (B cell)
TAX577745(Rovira)
total RNA. (breast)
SRR060981(GSM569185)
Human centroblast [09-001]. (cell line)
SRR039611(GSM531974)
Human Normal Liver Tissue Sample 1. (liver)
SRR189781(GSM714641)
cell line: HEK293clip variant: PAR-CLIPenzyma. (cell line)
SRR326279(GSM769509)
cytoplasmic fraction was isolated using PARIS. (cell line)
TAX577744(Rovira)
total RNA. (breast)
SRR330863(SRX091701)
tissue: skin psoriatic involveddisease state:. (skin)
SRR330874(SRX091712)
tissue: skin psoriatic involveddisease state:. (skin)
SRR330906(SRX091744)
tissue: normal skindisease state: normal. (skin)
SRR330867(SRX091705)
tissue: skin psoriatic involveddisease state:. (skin)
SRR342901(SRX096797)
small RNA seq of Left atrial tissue. (heart)
......................................................................................................................................................................................................................................................CATGGACTCTGAGTGGCGACT..........................................................................................................................................................................................................................................................................................................................................2117.007.00----7.00-------------------------------------------------------------------------------------
...................................................................................................................................................................................................................ACACCACTACTACAAGCACAGCCG..........................................................................................................................................................................................................................................................................................................................................................................244.000.00--3.00-----1.00---------------------------------------------------------------------------------
..............................................................................................................................................................................................ACGGGTGGAATGAGGGGTGAGA.................................................................................................................................................................................................................................................................................................................................................................................................2213.003.00-------------3.00----------------------------------------------------------------------------
.......................................................................................................................................................................................................................................................................................................................................AGGAGCATGTAGGCAGGC............................................................................................................................................................................................................................................................1813.003.00------------------2.00----------------------------1.00------------------------------------------
...............................................................................................................................................................................................................................................................................................................................................................ATGTAGGTGGCAAGTGGC....................................................................................................................................................................................................................................1812.002.00------------------------------2.00-----------------------------------------------------------
..............................................................................................................................................................................................................................ACAAGCACAGTCGGGCCG.....................................................................................................................................................................................................................................................................................................................................................................1812.002.00-2.00----------------------------------------------------------------------------------------
............................................................................................................................................................................................................................................................................................................................................................CAGATGTAGGTGGCACTCA......................................................................................................................................................................................................................................192.000.00--------------------2.00---------------------------------------------------------------------
..........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................CTACCCCACATCACTTAATTTATTTCCG...............................................................................2812.002.00--1.00-----1.00---------------------------------------------------------------------------------
..........................................................................................................................................................................................................................................................................................................................................................................................................................................................ACCCCTCTTCATGCACTGACT......................................................................................................................................212.000.00--2.00---------------------------------------------------------------------------------------
............................................................................................................................................................................................................................................................................................................................................................CAGATGTAGGTGGCAAGTGGCAC..................................................................................................................................................................................................................................2312.002.00----------2.00-------------------------------------------------------------------------------
...........................................................................................................................................................................................................................................................................................................................................GCATGTAGGCAGGCTCTCAGATGTAG................................................................................................................................................................................................................................................2611.001.00-----------------------------------------------------------------------------1.00------------
..........................................................................ACCCCGGGACCCCCTTA..........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................171.000.00-------------------------------------------------------------------------------1.00----------
..........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................TGTTTCTGGTTACTGTGAATCCCAGAGGAGTC...........................................3211.001.00--------------------------------1.00---------------------------------------------------------
...........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................ATTTATTTCCGTTTTTGTTTCTGGTT................................................................2611.001.00-----1.00------------------------------------------------------------------------------------
..........................................................................................................................................................................................................................................................................................................................................AGCATGTAGGCAGGCTCTCAGATGTA.................................................................................................................................................................................................................................................2611.001.00------------------------------------------------------1.00-----------------------------------
...................................................................................................................................................TCACTAAGGAGAAGGGGGC...............................................................................................................................................................................................................................................................................................................................................................................................................................................1911.001.00--------------1.00---------------------------------------------------------------------------
........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................CCCTACCCCACATCACACTT.........................................................................................201.000.00------------------------------------------------------------------1.00-----------------------
.............................CAGGCTCAGGTGGCGTTTGGA...................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................211.000.00-------------------1.00----------------------------------------------------------------------
...........................................................................................................................................................................................................................................................................................CGTGACTCGTGGCATGCGCAGGTGCTGG..............................................................................................................................................................................................................................................................................................2811.001.00---1.00--------------------------------------------------------------------------------------
...................................................................................................................................................................................................................ACACCACTACTACAAGCACAGTCG..........................................................................................................................................................................................................................................................................................................................................................................2411.001.00--1.00---------------------------------------------------------------------------------------
........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................CCCTACCCCACATCAGA............................................................................................171.000.00---------------------1.00--------------------------------------------------------------------
......................................................................................................................................................................................................................................................CATGGACTCTGAGTGGCAT............................................................................................................................................................................................................................................................................................................................................191.000.00-1.00----------------------------------------------------------------------------------------
.....................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................CACTTAATTTATTTCCGTT.............................................................................1911.001.00-----------------------1.00------------------------------------------------------------------
...................................................................................................................................................................................................................ACACCACTACTACAAGCACAGTC...........................................................................................................................................................................................................................................................................................................................................................................2311.001.00-------1.00----------------------------------------------------------------------------------
.............................CAGGCTCAGGTGGCGTTCCAGGTGT...............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2511.001.00-------------------------------------------------------1.00----------------------------------
...............................................................................................................................................................................................................................................................................................................................................GTAGGCAGGCTCTCAGATGTAGG...............................................................................................................................................................................................................................................2311.001.00---------------1.00--------------------------------------------------------------------------
....................................................................................................................................................................................................................CACCACTACTACAAGCACAGTCG..........................................................................................................................................................................................................................................................................................................................................................................2311.001.00---------------1.00--------------------------------------------------------------------------
.............................................................................................................................................................................................................................TACAAGCACAGTCGGGCC......................................................................................................................................................................................................................................................................................................................................................................1811.001.00-1.00----------------------------------------------------------------------------------------
.......................................................................................................................................................................................................................................................................................................................................................................................CCATGTCCGGAGGCCCAG............................................................................................................................................................................................................1811.001.00------------------------------------------------1.00-----------------------------------------
.......................................................................................................................................................................................................................................GTCGGGCCGCGGGCCGG.............................................................................................................................................................................................................................................................................................................................................................171.000.00-----------------------------------------------------------------------1.00------------------
...............................................................................................................................................................................................................................................................................................................................................GTAGGCAGGCTCTCAGATG...................................................................................................................................................................................................................................................1911.001.00-------------------------------------------------------------------------1.00----------------
.........................................................................................................................................................................................................................................................................................CCCGTGACTCGTGGCATGCGCAGGTGC.................................................................................................................................................................................................................................................................................................2711.001.00---------------------1.00--------------------------------------------------------------------
..............................................................................................................................................................................................................................................................................................................AGGTGCTGGAGCTTGGCAG....................................................................................................................................................................................................................................................................................1911.001.00----------------------------------------------------------------1.00-------------------------
............................................................................................................................................................................................................................CTACAAGCACAGTCGGTAA......................................................................................................................................................................................................................................................................................................................................................................191.000.00-1.00----------------------------------------------------------------------------------------
.............................................................................................................................................................................................TACGGGTGGAATGAGGGGTGA...................................................................................................................................................................................................................................................................................................................................................................................................2111.001.00-------------------------------------------------------------------1.00----------------------
..........................................................................................................................................................................................................................................................................................................................................AGCATGTAGGCAGGCAAA.........................................................................................................................................................................................................................................................181.000.00---------------------------------------------------1.00--------------------------------------
.............................................................................................................................................................................................TACGGGTGGAATGAGGGGTGAGACA...............................................................................................................................................................................................................................................................................................................................................................................................2511.001.00---1.00--------------------------------------------------------------------------------------
.....................................................................................................................................................................................................................................................................................................................................................AGGCTCTCAGATGTAGGTGGCA..........................................................................................................................................................................................................................................2211.001.00----------------------------------------1.00-------------------------------------------------
.................CAGCGGACGCACCAGGCTCAGGTGGC..........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2611.001.00---1.00--------------------------------------------------------------------------------------
.......................................................................................................................................................................................................................................................................................................................................AGGAGCATGTAGGCAGGCTCTCAGATGTAGGT..............................................................................................................................................................................................................................................3211.001.00-----------------------------------------------------------1.00------------------------------
.................................................................................................................................................................................................................................AGCACAGTCGGGCCG.....................................................................................................................................................................................................................................................................................................................................................................1511.001.00-----------------------------------1.00------------------------------------------------------
.................................................................................................................................................................................................................................AGCACAGTCGGGCCGCGGGCCCATGGA.........................................................................................................................................................................................................................................................................................................................................................2711.001.00---------1.00--------------------------------------------------------------------------------
......................................................................................................................................................................................................................................................CATGGACTCTGAGTGGCTAC...........................................................................................................................................................................................................................................................................................................................................201.000.00----------------1.00-------------------------------------------------------------------------
............................................................................................................................................................AGAAGGGGGCCACACTCCTCTGTGCCCTG............................................................................................................................................................................................................................................................................................................................................................................................................................2911.001.00-----1.00------------------------------------------------------------------------------------
..............................................................................................................................................................................................................................ACAAGCACAGTCGGGCCGTT...................................................................................................................................................................................................................................................................................................................................................................2011.002.00-1.00----------------------------------------------------------------------------------------
.......................................................................................................................................................................................................................................................................................................................................................................................................................................................................CACTGATTTGGGGAACATGAC.........................................................................................................................2111.001.00---------------------------------------------------------------------------1.00--------------
...........................................................................................................................................................................................................................................................................................CGTGACTCGTGGCATGCGCAG.....................................................................................................................................................................................................................................................................................................2111.001.00----------1.00-------------------------------------------------------------------------------
.......................................................................................................................................................................................................................................................................................................................................................................................CCATGTCCGGAGGCCGTGG...........................................................................................................................................................................................................191.000.00------1.00-----------------------------------------------------------------------------------
..............................................................................................................................................................................................................................................................................................................................................TGTAGGCAGGCTCTCAGATGTAGGTGG............................................................................................................................................................................................................................................2711.001.00-----1.00------------------------------------------------------------------------------------
....................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................CCCACATGAAGCTGCTTTTTCC...........2211.001.00-------1.00----------------------------------------------------------------------------------
..........................................................................................................................................................................................................................................................................................................................................AGCATGTAGGCAGGCTCTCAGAA....................................................................................................................................................................................................................................................231.000.00---------------------------------------------------------------------------------1.00--------
.............................................................................................................................................................................................TACGGGTGGAATGAGGGGTGAGA.................................................................................................................................................................................................................................................................................................................................................................................................2311.001.00---------------1.00--------------------------------------------------------------------------
...............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................CTGGTTACTGTGAATCCCAG..................................................2011.001.00--1.00---------------------------------------------------------------------------------------
........................................................................................................................................................................................................................ACTACTACAAGCACAGT............................................................................................................................................................................................................................................................................................................................................................................1721.001.00--------------------------------------------------1.00---------------------------------------
................................................................................................................................CCAGCCGAACTTGAGTGGGTCA...............................................................................................................................................................................................................................................................................................................................................................................................................................................................2211.001.00----------------------------------------------------------1.00-------------------------------
............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................TTTATTTCCGTTTTTGTTTCTGGC.................................................................241.000.00------1.00-----------------------------------------------------------------------------------
..............................................................................................................................................................................................................................ACAAGCACAGTCGGGAAAA....................................................................................................................................................................................................................................................................................................................................................................191.000.00-1.00----------------------------------------------------------------------------------------
.........................................................................................................................................................................................................................................................................................................................................................................................................................................................TACCCCTCTTCATGCACTG.........................................................................................................................................1911.001.00-------1.00----------------------------------------------------------------------------------
...........................................................................................................................................................................................................................................GGCCGCGGGCCCATGGACTCTGAGTGGCGA............................................................................................................................................................................................................................................................................................................................................3011.001.00-----------------------------1.00------------------------------------------------------------
........................................................................................................................................................................................................................................................................................TCCCGTGACTCGTGGCATGCG........................................................................................................................................................................................................................................................................................................2111.001.00----------------------------------------------------1.00-------------------------------------
..................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................CATCACTTAATTTATTTCCG...............................................................................2011.001.00--------------------------------------------------------------------------1.00---------------
.......................................................................................................................................................................................................................................................................................................................................AGGAGCATGTAGGCAGGCTCTCAGACG...................................................................................................................................................................................................................................................271.000.00-----1.00------------------------------------------------------------------------------------
.................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................ACATCACTTAATTTATTT..................................................................................1811.001.00----------------------------------------------------------------------------------1.00-------
...........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................CTCCCTTTTACTCCCCTACCCCACA.................................................................................................2511.001.00----------1.00-------------------------------------------------------------------------------
......................................................................................................................................................................................................................................................................................................................................CAGGAGCATGTAGGCAGG.............................................................................................................................................................................................................................................................1811.001.00---1.00--------------------------------------------------------------------------------------
............................................................................................................................................................................................................................................................................................................................................................CAGATGTAGGTGGCAAGTGGC....................................................................................................................................................................................................................................2111.001.00-----------------------1.00------------------------------------------------------------------
......................................................................................................................................................................................................................................................CATGGACTCTGAGTGGCGACTG.........................................................................................................................................................................................................................................................................................................................................2211.001.00---------------------------------------------------------------------1.00--------------------
.............................................................................................................................................................................................................................TACAAGCACAGTCGGGCCGTTT..................................................................................................................................................................................................................................................................................................................................................................221.000.00-1.00----------------------------------------------------------------------------------------
.....................................................................CCTACACCCCGGGACCCCCTTC..........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2211.001.00-------------------------1.00----------------------------------------------------------------
..............................................................................................................................................................................................ACGGGTGGAATGAGGGGTGAGACACCACCA.........................................................................................................................................................................................................................................................................................................................................................................................301.000.00------1.00-----------------------------------------------------------------------------------
.............................................................................................................................................................................................................................................CCGCGGGCCCATGGACTCTGAGTGGCG.............................................................................................................................................................................................................................................................................................................................................2711.001.00---1.00--------------------------------------------------------------------------------------
.................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................TTCCGTTTTTGTTTCTGGT.................................................................1911.001.00------1.00-----------------------------------------------------------------------------------
.............................................................................................................................................................................................................................................................................................................................................ATGTAGGCAGGCTCTCAGATGTAGGT..............................................................................................................................................................................................................................................2611.001.00---1.00--------------------------------------------------------------------------------------
..........................................................................................................................................................................................................................TACTACAAGCACAGTCGGGC.......................................................................................................................................................................................................................................................................................................................................................................2011.001.00-1.00----------------------------------------------------------------------------------------
.................................................................................................................................................................................................................................................................................................................................................................................................................................................GGCCCTGGTACCCCTCTTCATGCACT..........................................................................................................................................2611.001.00-------------------------------------------------------------1.00----------------------------
............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................TTTATTTCCGTTTTTGTTTCTGGTT................................................................2511.001.00------1.00-----------------------------------------------------------------------------------
........................................................................................................................................................................................................................................................TGGACTCTGAGTGGCGACA..........................................................................................................................................................................................................................................................................................................................................191.000.00-1.00----------------------------------------------------------------------------------------
.........................................................................................................................................................................................................................................................................................CCCGTGACTCGTGGCATT..........................................................................................................................................................................................................................................................................................................181.000.00--------------------------------------------------------------------------------1.00---------
.............................................................................................................................................................................................................................................................................................................................GCAGCCGCGCAGGAGCATGTAGGCAGGCT...........................................................................................................................................................................................................................................................2911.001.00----------------------------------------------------------------------1.00-------------------
...................................................................................................................................................................................................................................................................................................................................................................................................................GATGGGAGGAGTCGTGGGCT..............................................................................................................................................................................201.000.00-------1.00----------------------------------------------------------------------------------
...........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................ATTTATTTCCGTTTTTGTTTCTGGTC................................................................261.000.00-----1.00------------------------------------------------------------------------------------
..........................................................................................................................................................................................................................TACTACAAGCACAGTCGG.........................................................................................................................................................................................................................................................................................................................................................................1811.001.00-1.00----------------------------------------------------------------------------------------
..............................................................................................................................................................................................................................................................................................................................................TGTAGGCAGGCTCTCAGATGTAGG...............................................................................................................................................................................................................................................2411.001.00----------------------------------1.00-------------------------------------------------------
..........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................TCTCCCTGTGCCCACATGAAGCTGCTTCT..............291.000.00--------------------------1.00---------------------------------------------------------------
.....................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................GTTTTTGTTTCTGGTTACTGTG..........................................................2211.001.00-----1.00------------------------------------------------------------------------------------
..........................................................................................................................................................................................................................................................................................................................................................................................................................................................................TGATTTGGGGAACATGACT........................................................................................................................1911.001.00--------------------------------------------------------------------1.00---------------------
...................GCGGACGCACCAGGCTCAGGTGGCG.........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2511.001.00--------------1.00---------------------------------------------------------------------------
........................................................................................................................................................................................................................................................................................................................................................CTCTCAGATGTAGGTGGCAAGTG......................................................................................................................................................................................................................................2311.001.00-------------------------------------------1.00----------------------------------------------
.......................................................................................................................................................................................................................................................................................TTCCCGTGACTCGTGGCATGCGCAGGTG..................................................................................................................................................................................................................................................................................................2811.001.00---1.00--------------------------------------------------------------------------------------
.......................................................................................................................................................................................................................................................ATGGACTCTGAGTGGCATT...........................................................................................................................................................................................................................................................................................................................................191.000.00-1.00----------------------------------------------------------------------------------------
........................................................................................................................................................................................................................................................................................................ATGCGCAGGTGCTGGAGCTTG........................................................................................................................................................................................................................................................................................2111.001.00--------------------------------------------------------1.00---------------------------------
............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................TCCCTGTGCCCACATGAAGCTGCTTC...............261.000.00--------------------------1.00---------------------------------------------------------------
............................................................................................................................................................................................................................................................................................................................................................................................TCCGGAGGCCCAGCACTCCGTCTGACGGG............................................................................................................................................................................................291.000.00-----1.00------------------------------------------------------------------------------------
..............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................TCTGGTTACTGTGAATCCCAGAGG...............................................2411.001.00---------------------------------1.00--------------------------------------------------------
........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................TCTCTCCCTGTGCCCACATGAAGCTGCTT................2911.001.00--------------1.00---------------------------------------------------------------------------
..........................................................................................................................................................................................................................................................................................................................................AGCATGTAGGCAGGCTCTCAGAT....................................................................................................................................................................................................................................................2311.001.00--------------------------------------1.00---------------------------------------------------
..................................................................................................................................................................................................GTGGAATGAGGGGTGAGACAC..............................................................................................................................................................................................................................................................................................................................................................................................2111.001.00-----------------1.00------------------------------------------------------------------------
.....................................................................................................................................................................................................................................................................................................................................GCAGGAGCATGTAGGCAGGC............................................................................................................................................................................................................................................................2011.001.00---------------------------1.00--------------------------------------------------------------
.........................................................................................................................................................................................................................................................................................................................................................................................ATGTCCGGAGGCCCAGC...........................................................................................................................................................................................................1720.500.50---0.50--------------------------------------------------------------------------------------
........................................................................................................................................................................................................................................................................................TCCCGTGACTCGTGGCA............................................................................................................................................................................................................................................................................................................1720.500.50-----------------------------------------------------------------------------------0.50------
.............................................................................................................................................................................................................................................................................................................................................ATGTAGGCAGGCTCTC........................................................................................................................................................................................................................................................1650.400.40---0.20--0.20-----------------------------------------------------------------------------------
.........................................................................................................................................................................................................................................................................................CCCGTGACTCGTGGC.............................................................................................................................................................................................................................................................................................................1530.330.33--------------------------------------------------------------------------------------0.33---
............................................................................................................................................................................................................................................................................................................................................CATGTAGGCAGGCTC..........................................................................................................................................................................................................................................................1530.330.33-------------------------------------------------------------------------------------0.33----
............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................TTTATTTCCGTTTTTG.........................................................................1650.200.20---------------------------------------------------------------------------------------0.20--
.........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................CTCTCCCTGTGCCCACA...........................1760.170.17----------------------------------------------------------------------------------------0.17-
..........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................CTACCCCACATCACT............................................................................................1580.120.12---------------------------------0.12--------------------------------------------------------
........................................................................................................................................................................................................................................................TGGACTCTGAGTGGC..............................................................................................................................................................................................................................................................................................................................................1580.120.12-----------------------------------------------------------------------------------------0.12

Antisense strand
TCCGGGACCCCAAATCCCAGCGGACGCACCAGGCTCAGGTGGCGTTCCAGGTGTGTGTGCGCCCTGGCTCCTACACCCCGGGACCCCCTTCCGCTGCCCTTGGAGAACCTCCTGACCCTCACTTCAGTCCAGCCGAACTTGAGTGGGTCACTAAGGAGAAGGGGGCCACACTCCTCTGTGCCCTGCTGGTACGGGTGGAATGAGGGGTGAGACACCACTACTACAAGCACAGTCGGGCCGCGGGCCCATGGACTCTGAGTGGCGACTGCCTCCACCTCATTCCCGTGACTCGTGGCATGCGCAGGTGCTGGAGCTTGGCAGCCGCGCAGGAGCATGTAGGCAGGCTCTCAGATGTAGGTGGCAAGTGGCACAGCTCCATGTCCGGAGGCCCAGCACTCCGTCTGATGGGAGGAGTCGTGGGAGCCCAGCTCCAGGCCCTGGTACCCCTCTTCATGCACTGATTTGGGGAACATGACTCCCTTTTACTCCCCTACCCCACATCACTTAATTTATTTCCGTTTTTGTTTCTGGTTACTGTGAATCCCAGAGGAGTCTCTCCCTGTGCCCACATGAAGCTGCTTTTTCCGGGGCCACCGG
..............................................................................................................................................................................................................(((......))).........((.(((((((((...)))))...)))).))...(((....))).......................................................................................................................................................................................................................................................................................................................................
..............................................................................................................................................................................................................207.............................................................271....................................................................................................................................................................................................................................................................................................................................
SizePerfect hitTotal NormPerfect NormSRR387910(GSM843862)
antibody for ip: Ago2. (ago2 cell line)
SRR033711(GSM497056)
GCB DLBCL (GCB110). (B cell)
SRR189784SRR553572(SRX182778)
source: Frontal Cortex. (Frontal Cortex)
SRR015363(GSM380328)
Germinal Center B cell (GC40). (B cell)
SRR189780(GSM714640)
cell line: HEK293clip variant: PAR-CLIPenzyma. (cell line)
SRR189779(GSM714639)
cell line: HEK293clip variant: PAR-CLIPenzyma. (cell line)
SRR189782SRR189785SRR207116(GSM721078)
Nuclear RNA. (cell line)
SRR342894(SRX096790)
small RNA seq of Right atrial tissue. (heart)
SRR040018(GSM532903)
G701N. (cervix)
SRR207110(GSM721072)
Nuclear RNA. (cell line)
SRR039615(GSM531978)
Severe Chronic Hepatitis B Liver Tissue. (liver)
SRR553573(SRX182779)
source: Cerebellum. (Cerebellum)
SRR207115(GSM721077)
XRN1&2 knockdown. (XRN1/XRN2 cell line)
SRR330889(SRX091727)
tissue: skin psoriatic uninvolveddisease stat. (skin)
SRR039616(GSM531979)
HBV(+) Distal Tissue Sample 1. (liver)
SRR039614(GSM531977)
HBV-infected Liver Tissue. (liver)
SRR040010(GSM532895)
G529N. (cervix)
SRR039190(GSM494809)
PBMCs were isolated by ficoll gradient from t. (blood)
TAX577740(Rovira)
total RNA. (breast)
SRR444062(SRX128910)
Sample 27_3cDNABarcode: AF-PP-343: ACG CTC TT. (skin)
SRR330919(SRX091757)
tissue: normal skindisease state: normal. (skin)
SRR444047(SRX128895)
Sample 27_1cDNABarcode: AF-PP-343: ACG CTC TT. (skin)
SRR330868(SRX091706)
tissue: skin psoriatic involveddisease state:. (skin)
SRR189786SRR107296(GSM677703)
18-30nt fraction of small RNA. (cell line)
SRR037934(GSM510472)
293cand4_rep3. (cell line)
SRR039622(GSM531985)
HCV(+) Adjacent Tissue Sample. (liver)
GSM956925Ago2PAZ(GSM956925)
"cell line: HEK293 cell linepassages: 15-20ip. (ago2 cell line)
SRR040024(GSM532909)
G613N. (cervix)
SRR330859(SRX091697)
tissue: skin psoriatic involveddisease state:. (skin)
SRR330880(SRX091718)
tissue: skin psoriatic involveddisease state:. (skin)
RoviraIPAgo2(Rovira)
total RNA. (ago2 breast)
DRR001488(DRX001042)
"Hela short nuclear cell fraction, LNA(+)". (hela)
SRR033719(GSM497064)
6hr Activated B cell line (ABC158). (B cell)
SRR330865(SRX091703)
tissue: skin psoriatic involveddisease state:. (skin)
GSM450606(GSM450606)
miRNA sequencing raw reads from post-mortem s. (brain)
SRR330905(SRX091743)
tissue: normal skindisease state: normal. (skin)
GSM1105748AGO1(GSM1105748)
small RNA sequencing data. (ago1 hela)
SRR094129(GSM651905)
small RNA(18-35nt)small RNA deep sequencing o. (uterus)
SRR444068(SRX128916)
Sample 25cDNABarcode: AF-PP-341: ACG CTC TTC . (cell line)
SRR330908(SRX091746)
tissue: normal skindisease state: normal. (skin)
SRR040013(GSM532898)
G648T. (cervix)
SRR444065(SRX128913)
Sample 22cDNABarcode: AF-PP-335: ACG CTC TTC . (cell line)
SRR444041(SRX128889)
Sample 2cDNABarcode: AF-PP-334: ACG CTC TTC C. (skin)
SRR207112(GSM721074)
RRP40 knockdown. (RRP40 cell line)
SRR039618(GSM531981)
HBV(+) Side Tissue Sample 1. (liver)
SRR330885(SRX091723)
tissue: skin psoriatic uninvolveddisease stat. (skin)
SRR094131(GSM651907)
small RNA(18-35nt)small RNA deep sequencing o. (uterus)
SRR037937(GSM510475)
293cand2. (cell line)
SRR330911(SRX091749)
tissue: normal skindisease state: normal. (skin)
SRR033726(GSM497071)
Mututated CLL (CLLM633). (B cell)
SRR039612(GSM531975)
Human Normal Liver Tissue Sample 2. (liver)
SRR095854(SRX039177)
"miRNA were isolated from FirstChoice Human B. (brain)
TAX577739(Rovira)
total RNA. (breast)
SRR040039(GSM532924)
G531T. (cervix)
SRR015447(SRR015447)
nuclear small RNAs. (breast)
TAX577590(Rovira)
total RNA. (breast)
SRR040014(GSM532899)
G623N. (cervix)
GSM359178(GSM359178)
hela_nucl_t. (hela)
SRR444057(SRX128905)
Sample 15cDNABarcode: AF-PP-334: ACG CTC TTC . (skin)
SRR033720(GSM497065)
EBV activated B cell line (EBV159). (B cell)
GSM450608(GSM450608)
miRNA sequencing raw reads from post-mortem s. (brain)
SRR553576(SRX182782)
source: Testis. (testes)
TAX577579(Rovira)
total RNA. (breast)
SRR038857(GSM458540)
D20. (cell line)
SRR330894(SRX091732)
tissue: skin psoriatic uninvolveddisease stat. (skin)
SRR060168(GSM565978)
5-8F_nucleus. (cell line)
SRR060169(GSM565979)
5-8F_cytoplasm. (cell line)
SRR330915(SRX091753)
tissue: normal skindisease state: normal. (skin)
SRR326282(GSM769512)
"Dicer mRNA was knocked down using siDicer, t. (cell line)
SRR342895(SRX096791)
small RNA seq of Left atrial tissue. (heart)
SRR189776(GSM714636)
cell line: HEK293clip variant: CLIPenzymatic . (cell line)
SRR330893(SRX091731)
tissue: skin psoriatic uninvolveddisease stat. (skin)
SRR326280(GSM769510)
total cell content of unperturbed cells was s. (cell line)
SRR330866(SRX091704)
tissue: skin psoriatic involveddisease state:. (skin)
SRR033723(GSM497068)
L1236 cell line (L1236). (B cell)
TAX577745(Rovira)
total RNA. (breast)
SRR060981(GSM569185)
Human centroblast [09-001]. (cell line)
SRR039611(GSM531974)
Human Normal Liver Tissue Sample 1. (liver)
SRR189781(GSM714641)
cell line: HEK293clip variant: PAR-CLIPenzyma. (cell line)
SRR326279(GSM769509)
cytoplasmic fraction was isolated using PARIS. (cell line)
TAX577744(Rovira)
total RNA. (breast)
SRR330863(SRX091701)
tissue: skin psoriatic involveddisease state:. (skin)
SRR330874(SRX091712)
tissue: skin psoriatic involveddisease state:. (skin)
SRR330906(SRX091744)
tissue: normal skindisease state: normal. (skin)
SRR330867(SRX091705)
tissue: skin psoriatic involveddisease state:. (skin)
SRR342901(SRX096797)
small RNA seq of Left atrial tissue. (heart)
.....................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................CTCCCCTACCCCACATCGTT............................................................................................ 2015.000.007.00----------3.00------------------------1.00-----1.00-1.00-1.00----------------1.00--------------------------
.....................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................CTCCCCTACCCCACACGTT............................................................................................. 1914.000.005.00------------------1.00--2.00-1.00------2.00-------------1.00--------------1.00-1.00---------------------------
.....................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................CTCCCCTACCCCACACGT.............................................................................................. 186.000.004.00-------2.00---------------------------------------------------------------------------------
.....................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................CTCCCCTACCCCACATCGT............................................................................................. 193.000.003.00-----------------------------------------------------------------------------------------
...............................................................................................................................................................................................................................................................................................................................................................................CGGACATGGAGCTGTGC..................................................................................................................................................................................................................... 1713.003.00------------3.00-----------------------------------------------------------------------------
....................................................................................................................................................................................................................GGCCCGACTGTGCTTGTAGTAGTGGTG...................................................................................................................................................................................................................................................................................................................................................................... 2712.002.00---------2.00--------------------------------------------------------------------------------
...................................................................................................................CGGCTGGACTGAAGTGAGGG.............................................................................................................................................................................................................................................................................................................................................................................................................................................................................. 2012.002.00---------------------------1.00--------------------------------------------------1.00-----------
...........................................................................CGGAAGGGGGTCCCGGGG........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................ 1812.002.00----------------------------2.00-------------------------------------------------------------
.........................................................................................................................................................................................................................................................................CTGCCTCCACCTCATAGCT......................................................................................................................................................................................................................................................................................................................... 191.000.00-----------------------------1.00------------------------------------------------------------
......................................................................................................................................................................................................................CCACTACTACAAGCACAGTCGGGCCGG.................................................................................................................................................................................................................................................................................................................................................................... 271.000.00---------1.00--------------------------------------------------------------------------------
................................................................................................................................................................................................................................................................................................................................................................................GCCTCCGGACATGGAGCTGTG................................................................................................................................................................................................................ 2111.001.00----------------------------------------------------------------------------1.00-------------
........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................TAAATTAAGTGATGTGGGGTAGGG..................................................................................... 2411.001.00-----------------------------------------------------------------1.00------------------------
.....................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................CTCCCCTACCCCACACCTT............................................................................................. 191.000.00------------------------1.00-----------------------------------------------------------------
................................................................................................................................................................................................................GACTGTGCTTGTAGTAGTGGTGTCTC........................................................................................................................................................................................................................................................................................................................................................................... 2611.001.00-----------------------------------------1.00------------------------------------------------
............................................................................................................................................................................................................................................................................................................CGGCTGCCAAGCTCCAGCACCTGC................................................................................................................................................................................................................................................................................. 2411.001.00-------------------------------------1.00----------------------------------------------------
..........................................................................................................................................................................................................................................................................TGCCTCCACCTCATTTGAG........................................................................................................................................................................................................................................................................................................................ 191.000.00-----------------1.00------------------------------------------------------------------------
...............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................CTGCTTTTTCCGGGGG...... 161.000.00-------------------------1.00----------------------------------------------------------------
...................................................................................................................................................................................................................................................GTCGCCACTCAGAGTCCATGGGC........................................................................................................................................................................................................................................................................................................................................... 2311.001.00---------1.00--------------------------------------------------------------------------------
................................................................................................................................................................................................................................................................................................................................................................................................GACGGAGTGCTGGGCCTC................................................................................................................................................................................................... 1811.001.00------------------------------------------------------------------------1.00-----------------
..........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................TGAAGCTGCTTTTTCAAC......... 181.000.00---------------------------------------------------------1.00--------------------------------
....................................................................................................................................................................GCCACACTCCTCTGTGAGTT............................................................................................................................................................................................................................................................................................................................................................................................................................. 201.000.00-----------------------------------------------------1.00------------------------------------
......................................................................CTACACCCCGGGACCCGGT............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................ 191.000.00--------1.00---------------------------------------------------------------------------------
................................................................................................................................................................................................................................................................................................................................................................................................ACGGAGTGCTGGGCCTC.................................................................................................................................................................................................... 1711.001.00---------------------------------------1.00--------------------------------------------------
............................................................................................GAGGTTCTCCAAGGGCAGC...................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................... 1911.001.00--------------------------------1.00---------------------------------------------------------
..................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................GTTACTGTGAATCCCTGA................................................. 181.000.00-------1.00----------------------------------------------------------------------------------
...............AGCCTGGTGCGTCCGCTGGG.................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................. 2011.001.00-------------------------------------------------1.00----------------------------------------
.....................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................CTCCCCTACCCCACACGTA............................................................................................. 191.000.001.00-----------------------------------------------------------------------------------------
..............................................................................................................................CTTAGTGACCCACTCAAGTTCGGCTGGAC.......................................................................................................................................................................................................................................................................................................................................................................................................................................................... 2911.001.00----------------1.00-------------------------------------------------------------------------
.............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................CCCCGGAAAAAGCAGCT....... 1720.500.50------------------------------------------------------------------------------------0.50-----