ID: uc002fzc.2_intron_18_0_chr17_4721681_f
GENE: (19)
chr17:4721631-4721838+


(1)
AGO1.ip
(1)
AGO1.ip OTHER.mut
(2)
AGO2.ip
(5)
B-CELL
(7)
BRAIN
(10)
BREAST
(21)
CELL-LINE
(7)
CERVIX
(2)
FIBROBLAST
(2)
HEART
(1)
HELA
(7)
LIVER
(2)
OTHER
(40)
SKIN
(1)
TESTES
(1)
UTERUS
(1)
XRN.ip

Sense strand
CTGAACAAGGTGGGCGATGAGATTGTGGACAGAATCCTGAAGGCCCACAAGTAAGGTGGACTGTCAGGAAGGTGGGGACTGTGGGTGTGGTTTGAGCCCGGTTGAAGGGGGTGGGGTTTGAGGGACCAGTCGCACCTCTGACTCCACCCCCTCCCCAGACAGGGGTGGTGTTACCGAGTCTACGTGCTTTTGCCCTTACTCCCTGGCT
........................................................................(((((....(((((.........))))).....(((((((((((((.((((...........)))).))))))))))))))))))...................................................
..................................................51.........................................................................................................158................................................
SizePerfect hitTotal NormPerfect NormSRR553572(SRX182778)
source: Frontal Cortex. (Frontal Cortex)
SRR207113(GSM721075)
IP against AGO 1 & 2. (ago1/2 cell line)
SRR207115(GSM721077)
XRN1&2 knockdown. (XRN1/XRN2 cell line)
SRR107297(GSM677704)
18-30nt fraction of small RNA. (cell line)
SRR037944(GSM510482)
293DcrTN_cand5. (cell line)
SRR326279(GSM769509)
cytoplasmic fraction was isolated using PARIS. (cell line)
SRR330878(SRX091716)
tissue: skin psoriatic involveddisease state:. (skin)
SRR330872(SRX091710)
tissue: skin psoriatic involveddisease state:. (skin)
SRR037942(GSM510480)
293DroshaTN_cand5. (cell line)
SRR029054(GSM402329)
MCF7_smallRNAseq. (cell line)
SRR207111(GSM721073)
Whole cell RNA. (cell line)
GSM450601(GSM450601)
miRNA sequencing raw reads from post-mortem s. (brain)
SRR330923(SRX091761)
tissue: normal skindisease state: normal. (skin)
SRR330861(SRX091699)
tissue: skin psoriatic involveddisease state:. (skin)
SRR330901(SRX091739)
tissue: skin psoriatic uninvolveddisease stat. (skin)
SRR326280(GSM769510)
total cell content of unperturbed cells was s. (cell line)
SRR330876(SRX091714)
tissue: skin psoriatic involveddisease state:. (skin)
RoviraIPAgo2(Rovira)
total RNA. (ago2 breast)
SRR444061(SRX128909)
Sample 19cDNABarcode: AF-PP-341: ACG CTC TTC . (skin)
SRR189784SRR330873(SRX091711)
tissue: skin psoriatic involveddisease state:. (skin)
SRR553573(SRX182779)
source: Cerebellum. (Cerebellum)
TAX577740(Rovira)
total RNA. (breast)
SRR330904(SRX091742)
tissue: normal skindisease state: normal. (skin)
SRR363675(GSM830252)
cell type: human foreskin fibroblasts (HFF)tr. (fibroblast)
SRR330887(SRX091725)
tissue: skin psoriatic uninvolveddisease stat. (skin)
SRR330871(SRX091709)
tissue: skin psoriatic involveddisease state:. (skin)
SRR553576(SRX182782)
source: Testis. (testes)
SRR330858(SRX091696)
tissue: skin psoriatic involveddisease state:. (skin)
SRR330902(SRX091740)
tissue: skin psoriatic uninvolveddisease stat. (skin)
SRR039613(GSM531976)
Human Normal Liver Tissue Sample 3. (liver)
SRR039622(GSM531985)
HCV(+) Adjacent Tissue Sample. (liver)
SRR326282(GSM769512)
"Dicer mRNA was knocked down using siDicer, t. (cell line)
SRR342897(SRX096793)
small RNA seq of Left atrial tissue. (heart)
SRR342898(SRX096794)
small RNA seq of Right atrial tissue. (heart)
DRR001485(DRX001039)
"Hela long total cell fraction, LNA(+)". (hela)
SRR330920(SRX091758)
tissue: normal skindisease state: normal. (skin)
SRR326281(GSM769511)
"Dicer mRNA was knocked down using siDicer, c. (cell line)
SRR330874(SRX091712)
tissue: skin psoriatic involveddisease state:. (skin)
SRR330921(SRX091759)
tissue: normal skindisease state: normal. (skin)
SRR033719(GSM497064)
6hr Activated B cell line (ABC158). (B cell)
GSM450606(GSM450606)
miRNA sequencing raw reads from post-mortem s. (brain)
SRR330912(SRX091750)
tissue: normal skindisease state: normal. (skin)
SRR033718(GSM497063)
Multiple Myeloma (U266). (B cell)
SRR037936(GSM510474)
293cand1. (cell line)
SRR330883(SRX091721)
tissue: skin psoriatic uninvolveddisease stat. (skin)
GSM532876(GSM532876)
G547T. (cervix)
SRR330881(SRX091719)
tissue: skin psoriatic uninvolveddisease stat. (skin)
SRR040010(GSM532895)
G529N. (cervix)
SRR039615(GSM531978)
Severe Chronic Hepatitis B Liver Tissue. (liver)
SRR039625(GSM531988)
HBV(-) HCV(-) HCC Tissue Sample. (liver)
SRR039620(GSM531983)
HBV(+) Adjacent Tissue Sample 2. (liver)
SRR330888(SRX091726)
tissue: skin psoriatic uninvolveddisease stat. (skin)
GSM450607(GSM450607)
miRNA sequencing raw reads from post-mortem s. (brain)
SRR330913(SRX091751)
tissue: normal skindisease state: normal. (skin)
SRR330906(SRX091744)
tissue: normal skindisease state: normal. (skin)
SRR330892(SRX091730)
tissue: skin psoriatic uninvolveddisease stat. (skin)
SRR040029(GSM532914)
G026T. (cervix)
SRR191590(GSM715700)
48genomic small RNA (size selected RNA from t. (breast)
SRR330907(SRX091745)
tissue: normal skindisease state: normal. (skin)
SRR040028(GSM532913)
G026N. (cervix)
SRR040011(GSM532896)
G529T. (cervix)
SRR189783SRR330885(SRX091723)
tissue: skin psoriatic uninvolveddisease stat. (skin)
SRR191492(GSM715602)
154genomic small RNA (size selected RNA from . (breast)
SRR330891(SRX091729)
tissue: skin psoriatic uninvolveddisease stat. (skin)
SRR094131(GSM651907)
small RNA(18-35nt)small RNA deep sequencing o. (uterus)
SRR037876(GSM522374)
fibroblasts_cell_culture. (fibroblast)
SRR189782SRR037937(GSM510475)
293cand2. (cell line)
GSM956925PazD5(GSM956925)
"cell line: HEK293 cell linepassages: 15-20ip. (cell line)
SRR039617(GSM531980)
HBV(+) Adjacent Tissue Sample 1. (liver)
SRR330909(SRX091747)
tissue: normal skindisease state: normal. (skin)
SRR033726(GSM497071)
Mututated CLL (CLLM633). (B cell)
SRR095854(SRX039177)
"miRNA were isolated from FirstChoice Human B. (brain)
SRR330884(SRX091722)
tissue: skin psoriatic uninvolveddisease stat. (skin)
GSM450603(GSM450603)
miRNA sequencing raw reads from post-mortem s. (brain)
SRR330917(SRX091755)
tissue: normal skindisease state: normal. (skin)
SRR040025(GSM532910)
G613T. (cervix)
SRR330896(SRX091734)
tissue: skin psoriatic uninvolveddisease stat. (skin)
SRR015447(SRR015447)
nuclear small RNAs. (breast)
SRR207114(GSM721076)
"IP against AGO 1 & 2, RRP40 knockdown". (ago1/2 RRP40 cell line)
SRR330899(SRX091737)
tissue: skin psoriatic uninvolveddisease stat. (skin)
GSM450610(GSM450610)
miRNA sequencing raw reads from post-mortem s. (brain)
SRR033720(GSM497065)
EBV activated B cell line (EBV159). (B cell)
SRR191548(GSM715658)
101genomic small RNA (size selected RNA from . (breast)
SRR390723(GSM850202)
total small RNA. (cell line)
SRR037941(GSM510479)
293DroshaTN. (cell line)
SRR191524(GSM715634)
119genomic small RNA (size selected RNA from . (breast)
SRR330862(SRX091700)
tissue: skin psoriatic involveddisease state:. (skin)
TAX577579(Rovira)
total RNA. (breast)
SRR330870(SRX091708)
tissue: skin psoriatic involveddisease state:. (skin)
SRR330894(SRX091732)
tissue: skin psoriatic uninvolveddisease stat. (skin)
SRR444053(SRX128901)
Sample 13cDNABarcode: AF-PP-341: ACG CTC TTC . (skin)
SRR060169(GSM565979)
5-8F_cytoplasm. (cell line)
SRR191591(GSM715701)
53genomic small RNA (size selected RNA from t. (breast)
GSM956925Ago2PAZ(GSM956925)
"cell line: HEK293 cell linepassages: 15-20ip. (ago2 cell line)
GSM450605(GSM450605)
miRNA sequencing raw reads from post-mortem s. (brain)
SRR330893(SRX091731)
tissue: skin psoriatic uninvolveddisease stat. (skin)
SRR033723(GSM497068)
L1236 cell line (L1236). (B cell)
SRR387909(GSM843861)
specific-host: Homo sapienshost cell line: Su. (cell line)
SRR039623(GSM531986)
HCV(+) HCC Tissue Sample. (liver)
SRR330895(SRX091733)
tissue: skin psoriatic uninvolveddisease stat. (skin)
SRR330859(SRX091697)
tissue: skin psoriatic involveddisease state:. (skin)
TAX577743(Rovira)
total RNA. (breast)
SRR029125(GSM416754)
U2OS. (cell line)
SRR040040(GSM532925)
G612N. (cervix)
SRR330914(SRX091752)
tissue: normal skindisease state: normal. (skin)
SRR330916(SRX091754)
tissue: normal skindisease state: normal. (skin)
........................................................................................................................................TCTGACTCCACCCCCTCCCCAGA.................................................23117.0017.00-6.00---3.00-1.00-----------------1.00---------------------1.00------1.00--------1.00-----------------1.00----------------1.00----1.00-----
...AACAAGGTGGGCGATGAGATTGTG.....................................................................................................................................................................................24113.0013.00--3.003.00---1.00-1.00------------------1.00---1.00----------------1.00-------------------------1.00------------------1.00--------------
..........................................................................................................................................TGACTCCACCCCCTCCCCAGT.................................................2111.000.00-3.00------3.00---1.00----1.00-------------------------------------------1.00---------------1.00---------1.00---------------------
..........................................................................................................................................TGACTCCACCCCCTCCCCAGA.................................................21111.0011.00----6.00----------1.00---------------------1.00------1.00-------------------------------------------1.00------1.00-------------
........................................................................................................................................TCTGACTCCACCCCCTCCCCAG..................................................2218.008.001.00------------1.00-------2.00-------1.00----------------------1.00---------------1.00----------1.00-----------------------------
........................................................................................................................................TCTGACTCCACCCCCTCCCCAGT.................................................2317.008.00-2.001.00--1.00-1.00--------1.00--------------------1.00-----------------------------------------------------------------------
...AACAAGGTGGGCGATGAGATTG.......................................................................................................................................................................................2215.005.00---1.00------------------------------1.00--------1.00-----------------------------1.00------------1.00----------------------
...AACAAGGTGGGCGATGAGATTGTGT....................................................................................................................................................................................2513.0013.00---2.00------------------------1.00--------------------------------------------------------------------------------
...AACAAGGTGGGCGATGAGATT........................................................................................................................................................................................2113.003.00---------1.00--------------------2.00------------------------------------------------------------------------------
......AAGGTGGGCGATGAGATTGTGG....................................................................................................................................................................................2213.003.00--3.00----------------------------------------------------------------------------------------------------------
........................................................................................................................................TCTGACTCCACCCCCTCCCC....................................................2013.003.00-------------1.00---------------------------------------------------------------------------1.00-1.00-----------------
........................................................................................................................................TCTGACTCCACCCCCTCCCCATT.................................................2312.001.00--------------------1.00---------------1.00------------------------------------------------------------------------
....................................................................................................................................CACCTCTGACTCCACCCCCTCC......................................................2212.002.00---------------1.00--------1.00------------------------------------------------------------------------------------
...........................................................ACTGTCAGGAAGGTGGGGA..................................................................................................................................1912.002.00------------------2.00------------------------------------------------------------------------------------------
...AACAAGGTGGGCGATGAGATTGTGGA...................................................................................................................................................................................2612.002.00--2.00----------------------------------------------------------------------------------------------------------
.........................TGGACAGAATCCTGAAGGCC...................................................................................................................................................................2012.002.00--------------1.00--------------------------------------------------1.00-------------------------------------------
.....................................................................................................TTGAAGGGGGTGGGGTTTGAGG.....................................................................................2212.002.00------------1.00------------1.00-----------------------------------------------------------------------------------
.......................................................................GTGGGGACTGTGGGTGTGGTTTGAGCCCGGTTGAAGGGGGTGGGGTTTGAGGGACCAGTCGCACCTCTGACTCCACCCCCTCCCCAGT.................................................882.000.00-----------------------------------2.00-------------------------------------------------------------------------
...AACAAGGTGGGCGATGAGA..........................................................................................................................................................................................1912.002.00----------1.00----------------------------------------------------------------------------------------1.00---------
...AACAAGGTGGGCGATGAGATTGT......................................................................................................................................................................................2312.002.00----------------------1.00---------1.00----------------------------------------------------------------------------
........................................................................................................................................TCTGACTCCACCCCCTCCCCATG.................................................2312.001.00--------------------------2.00----------------------------------------------------------------------------------
.......................................................................GTGGGGACTGTGGGTGTGGTTAA..................................................................................................................231.000.00---------1.00---------------------------------------------------------------------------------------------------
.................................................................AGGAAGGTGGGGACTGTGGG...........................................................................................................................2011.001.00--------------1.00----------------------------------------------------------------------------------------------
.....................ATTGTGGACAGAATCCTGAAGGCC...................................................................................................................................................................2411.001.00--------------------------------------------------------------------------------------------1.00----------------
........................................................................................................................................TCTGACTCCACCCCCTCCTACA..................................................2211.001.00-------------------1.00-----------------------------------------------------------------------------------------
........................................................................................................................................TCTGACTCCACCCCCTCC......................................................1811.001.001.00------------------------------------------------------------------------------------------------------------
...............................................................................TGTGGGTGTGGTTTGTGTG..............................................................................................................191.000.00--------------------------------------------------------------------------------------------------------1.00----
..........................................................................................................................................TGACTCCACCCCCTCCCCAAAT................................................221.000.00----------------------------------------------------------------------1.00--------------------------------------
.......................................................GTGGACTGTCAGGAAGGTGGGG...................................................................................................................................2211.001.00--------------------------------------------------------------------------------1.00----------------------------
......................................................................................................TGAAGGGGGTGGGGTTTGAG......................................................................................2011.001.00----------------------------------------------------------1.00--------------------------------------------------
......................................................................................................TGAAGGGGGTGGGGTTTGAGG.....................................................................................2111.001.00---------------------------------------1.00---------------------------------------------------------------------
.....................ATTGTGGACAGAATCCTGAAGGCCC..................................................................................................................................................................2511.001.001.00------------------------------------------------------------------------------------------------------------
........................................................................................................................................TCTGACTCCACCCCCTCCCCA...................................................2111.001.00--------------------1.00----------------------------------------------------------------------------------------
...AACAAGGTGGGCGATGAG...........................................................................................................................................................................................1811.001.00------------------------------------------------------------------1.00------------------------------------------
......................................................................................................TGAAGGGGGTGGGGTAGG........................................................................................181.000.00-----------------1.00-------------------------------------------------------------------------------------------
.TGAACAAGGTGGGCGATGAGATTGTGGACAGA...............................................................................................................................................................................3211.001.00-----------------------1.00-------------------------------------------------------------------------------------
...................................................TAAGGTGGACTGTCAGGAAGGTG......................................................................................................................................2311.001.001.00------------------------------------------------------------------------------------------------------------
...........................................CCCACAAGTAAGGTGGACTGTCAGGAAG.........................................................................................................................................2811.001.00------------------------1.00------------------------------------------------------------------------------------
.......................................................................................................................................................................GTGTTACCGAGTCTACGAA......................191.000.00--------------------------------------------------------1.00----------------------------------------------------
....................GATTGTGGACAGAATCCTGA........................................................................................................................................................................2011.001.00------1.00------------------------------------------------------------------------------------------------------
....................................................................................................................................CACCTCTGACTCCACCCCCTAT......................................................221.000.00-------------------1.00-----------------------------------------------------------------------------------------
........................................................................................................................................TCTGACTCCACCCCCTCCCCAGTA................................................2411.008.00-1.00-----------------------------------------------------------------------------------------------------------
...........GGGCGATGAGATTGTGGAC..................................................................................................................................................................................1911.001.00---------------------------1.00---------------------------------------------------------------------------------
.......................................................................................................................................CTCTGACTCCACCCCCTCCCCA...................................................2211.001.00--------------------------------------------------------------------------1.00----------------------------------
......................................................................................................TGAAGGGGGTGGGGTTTG........................................................................................1811.001.00----------1.00--------------------------------------------------------------------------------------------------
..........................................................................................................................................TGACTCCACCCCCTCCCCAGATT...............................................2311.0011.00------------------------------------1.00------------------------------------------------------------------------
..........TGGGCGATGAGATTGTGGACA.................................................................................................................................................................................2111.001.00------------------------------------------------------------1.00------------------------------------------------
.............................................CACAAGTAAGGTGGACTG.................................................................................................................................................1811.001.00------------------------------------------------------------------------------------------1.00------------------
.........GTGGGCGATGAGATTGTGGACAGAATC............................................................................................................................................................................2711.001.001.00------------------------------------------------------------------------------------------------------------
................ATGAGATTGTGGACAGAATC............................................................................................................................................................................2011.001.00------------------------------------------------------------------------------1.00------------------------------
......................................................................................................TGAAGGGGGTGGGGTTTGA.......................................................................................1911.001.00-----1.00-------------------------------------------------------------------------------------------------------
.......................TGTGGACAGAATCCTGAAGGCCC..................................................................................................................................................................2311.001.001.00------------------------------------------------------------------------------------------------------------
.......................................................................GTGGGGACTGTGGGTGTGGTTTG..................................................................................................................2311.001.00-----------------------------------------------------1.00-------------------------------------------------------
.......................................................................GTGGGGACTGTGGGTGTGGTTTGAGC...............................................................................................................2611.001.001.00------------------------------------------------------------------------------------------------------------
.TGAACAAGGTGGGCGATGAGATTGTGGA...................................................................................................................................................................................2811.001.00----------------------------------------------------------------------------------1.00--------------------------
..........................................................................................................................................TGACTCCACCCCCTCCCCAAAA................................................221.000.00---1.00---------------------------------------------------------------------------------------------------------
........................................................................................................................................TCTGACTCCACCCCCTCCC.....................................................1911.001.00---------------------------------------------1.00---------------------------------------------------------------
......AAGGTGGGCGATGAGATTGTGGACAGAA..............................................................................................................................................................................2811.001.00-------------------------------------------------------1.00-----------------------------------------------------
.........................TGGACAGAATCCTGAAGGCCC..................................................................................................................................................................2111.001.00-------------------------------------------------------------------------------------------------1.00-----------
....................................................................................................................................CACCTCTGACTCCACCCCTTCA......................................................221.000.00--------------------------------------------------------------1.00----------------------------------------------
........................................................................................................................................TCTGACTCCACCCCCTCCCCAGTTT...............................................2511.008.00------------------------------------------------------------------------------------------------------1.00------
........................................................................................................................................TCTGACTCCACCCCCTCCCCAGTAT...............................................2511.008.00-----------------------------1.00-------------------------------------------------------------------------------
.......................................................................GTGGGGACTGTGGGTGTGGTTTGT.................................................................................................................2411.001.00-----------------------------------------1.00-------------------------------------------------------------------
.......................................................................GTGGGGACTGTGGGTGTGGTTTGAG................................................................................................................2511.001.001.00------------------------------------------------------------------------------------------------------------
....................................................................................................................................CACCTCTGACTCCACCCCCTTC......................................................221.000.00-----------------------------------------------------------1.00-------------------------------------------------
...................AGATTGTGGACAGAATCCTGAAGGCCC..................................................................................................................................................................2711.001.00--------------------------------------------------1.00----------------------------------------------------------
........................GTGGACAGAATCCTGAAGGCC...................................................................................................................................................................2111.001.001.00------------------------------------------------------------------------------------------------------------
....................GATTGTGGACAGAATCCTGAAGGCCC..................................................................................................................................................................2611.001.00-------------1.00-----------------------------------------------------------------------------------------------
......................TTGTGGACAGAATCCTGAAGGC....................................................................................................................................................................2211.001.001.00------------------------------------------------------------------------------------------------------------
.......................................................................GTGGGGACTGTGGGTGTGGT.....................................................................................................................2011.001.00---------------------------------1.00---------------------------------------------------------------------------
........................................................................TGGGGACTGTGGGTGTGGTGTG..................................................................................................................221.000.00-----------1.00-------------------------------------------------------------------------------------------------
.......................................................................GTGGGGACTGTGGGTGAAT......................................................................................................................191.000.00----------------1.00--------------------------------------------------------------------------------------------
.................TGAGATTGTGGACAGAATC............................................................................................................................................................................1911.001.00------------------------------------------------------------------------------------------------1.00------------
.......AGGTGGGCGATGAGATTGTGGA...................................................................................................................................................................................2211.001.00---------------------------------1.00---------------------------------------------------------------------------
...............GATGAGATTGTGGACAGAACC............................................................................................................................................................................211.000.00---------------------------------------------------------------------------------------------1.00---------------
...AACAAGGTGGGCGATGAGATTGTGA....................................................................................................................................................................................2511.0013.00----------------1.00--------------------------------------------------------------------------------------------
..........................................................................................................................................TGACTCCACCCCCTCCCCAGAA................................................2211.0011.00----------------------------------------------------------------1.00--------------------------------------------
......................................................................................................TGAAGGGGGTGGGGTTTGAGGAA...................................................................................2311.001.00-------------------------------------------------------------------------------------1.00-----------------------
.....................................................................................................TTGAAGGGGGTGGGGTTTGAG......................................................................................2111.001.00-----------------------------------------------------------------------1.00-------------------------------------
........................................................................................................................................TCTGACTCCACCCCCTCCCCACA.................................................2311.001.00------------------------------------------------------------------------1.00------------------------------------
........................................................................................................................................TCTGACTCCACCCCCTCCCCAAT.................................................2311.001.001.00------------------------------------------------------------------------------------------------------------
...................AGATTGTGGACAGAAT.............................................................................................................................................................................1611.001.00--------------------------------------1.00----------------------------------------------------------------------
................ATGAGATTGTGGACAGA...............................................................................................................................................................................1711.001.001.00------------------------------------------------------------------------------------------------------------
.TGAACAAGGTGGGCGATGAGATTGT......................................................................................................................................................................................2511.001.00---------------------------1.00---------------------------------------------------------------------------------
...............................................................................TGTGGGTGTGGTTTGTA................................................................................................................171.000.00----------------------1.00--------------------------------------------------------------------------------------
........................................................................................................................................TCTGACTCCACCCCCTCCCCAT..................................................2211.001.00----------------------------------1.00--------------------------------------------------------------------------
................ATGAGATTGTGGACAGAATCCTGAAGGC....................................................................................................................................................................2811.001.001.00------------------------------------------------------------------------------------------------------------
....................GATTGTGGACAGAATCCTGAAGGCCCA.................................................................................................................................................................2711.001.00---------------------------------------------------1.00---------------------------------------------------------
.........................................................................................................AGGGGGTGGGGTTTGTAGA....................................................................................191.000.00-------------------------------------------------------------------1.00-----------------------------------------
.......................................................................GTGGGGACTGTGGGTGTGGTTT...................................................................................................................2211.001.00----------------------------------------------------------------------------1.00--------------------------------
........................................................................................................................................TCTGACTCCACCCCCTCCCCATA.................................................2311.001.00------------------------------------------------1.00------------------------------------------------------------
.......................................................GTGGACTGTCAGGAAGTCTG.....................................................................................................................................201.000.00--------------1.00----------------------------------------------------------------------------------------------
........................................................................................................................................TCTGACTCCACCCCCTCCCCAGAAA...............................................2511.0017.00---------------------------------------------------------------------------------------------------------1.00---
.................................................AGTAAGGTGGACTGTA...............................................................................................................................................161.000.00-----------------------1.00-------------------------------------------------------------------------------------
........................................................................................................................................TCTGACTCCACCCCCTCCCCAGC.................................................2311.008.00---------------1.00---------------------------------------------------------------------------------------------
.....................................................................................................TTGAAGGGGGTGGGGTTTG........................................................................................1911.001.00----------1.00--------------------------------------------------------------------------------------------------
.........................TGGACAGAATCCTGAAGGCCCACAA..............................................................................................................................................................2511.001.00-------------------------------1.00-----------------------------------------------------------------------------
.......................TGTGGACAGAATCCTGAAGGCCCA.................................................................................................................................................................2411.001.00-----------1.00-------------------------------------------------------------------------------------------------
......................TTGTGGACAGAATCCTGAAGGCCC..................................................................................................................................................................2411.001.001.00------------------------------------------------------------------------------------------------------------
...AACAAGGTGGGCGATGAGATTGTGTT...................................................................................................................................................................................2611.0013.00------1.00------------------------------------------------------------------------------------------------------
.......................TGTGGACAGAATCCTGAAGGCC...................................................................................................................................................................2211.001.001.00------------------------------------------------------------------------------------------------------------
...................AGATTGTGGACAGAATCCTGAAGGC....................................................................................................................................................................2511.001.00-------------------------------1.00-----------------------------------------------------------------------------
.......................TGTGGACAGAATCCTGAAGGC....................................................................................................................................................................2111.001.00-----------1.00-------------------------------------------------------------------------------------------------
...................................................................GAAGGTGGGGACTGTGGGTGTGGTTTGA.................................................................................................................2811.001.00------------1.00------------------------------------------------------------------------------------------------
.................TGAGATTGTGGACAGA...............................................................................................................................................................................1620.500.50-----------------------------------------------------------------------------------------------------------0.50-
.............GCGATGAGATTGTGG....................................................................................................................................................................................1520.500.50--------------------------------------0.50----------------------------------------------------------------------
.............GCGATGAGATTGTGGTCC.................................................................................................................................................................................1820.500.50----------------------------------------------------------------------------------------------------------0.50--

Antisense strand
CTGAACAAGGTGGGCGATGAGATTGTGGACAGAATCCTGAAGGCCCACAAGTAAGGTGGACTGTCAGGAAGGTGGGGACTGTGGGTGTGGTTTGAGCCCGGTTGAAGGGGGTGGGGTTTGAGGGACCAGTCGCACCTCTGACTCCACCCCCTCCCCAGACAGGGGTGGTGTTACCGAGTCTACGTGCTTTTGCCCTTACTCCCTGGCT
........................................................................(((((....(((((.........))))).....(((((((((((((.((((...........)))).))))))))))))))))))...................................................
..................................................51.........................................................................................................158................................................
SizePerfect hitTotal NormPerfect NormSRR553572(SRX182778)
source: Frontal Cortex. (Frontal Cortex)
SRR207113(GSM721075)
IP against AGO 1 & 2. (ago1/2 cell line)
SRR207115(GSM721077)
XRN1&2 knockdown. (XRN1/XRN2 cell line)
SRR107297(GSM677704)
18-30nt fraction of small RNA. (cell line)
SRR037944(GSM510482)
293DcrTN_cand5. (cell line)
SRR326279(GSM769509)
cytoplasmic fraction was isolated using PARIS. (cell line)
SRR330878(SRX091716)
tissue: skin psoriatic involveddisease state:. (skin)
SRR330872(SRX091710)
tissue: skin psoriatic involveddisease state:. (skin)
SRR037942(GSM510480)
293DroshaTN_cand5. (cell line)
SRR029054(GSM402329)
MCF7_smallRNAseq. (cell line)
SRR207111(GSM721073)
Whole cell RNA. (cell line)
GSM450601(GSM450601)
miRNA sequencing raw reads from post-mortem s. (brain)
SRR330923(SRX091761)
tissue: normal skindisease state: normal. (skin)
SRR330861(SRX091699)
tissue: skin psoriatic involveddisease state:. (skin)
SRR330901(SRX091739)
tissue: skin psoriatic uninvolveddisease stat. (skin)
SRR326280(GSM769510)
total cell content of unperturbed cells was s. (cell line)
SRR330876(SRX091714)
tissue: skin psoriatic involveddisease state:. (skin)
RoviraIPAgo2(Rovira)
total RNA. (ago2 breast)
SRR444061(SRX128909)
Sample 19cDNABarcode: AF-PP-341: ACG CTC TTC . (skin)
SRR189784SRR330873(SRX091711)
tissue: skin psoriatic involveddisease state:. (skin)
SRR553573(SRX182779)
source: Cerebellum. (Cerebellum)
TAX577740(Rovira)
total RNA. (breast)
SRR330904(SRX091742)
tissue: normal skindisease state: normal. (skin)
SRR363675(GSM830252)
cell type: human foreskin fibroblasts (HFF)tr. (fibroblast)
SRR330887(SRX091725)
tissue: skin psoriatic uninvolveddisease stat. (skin)
SRR330871(SRX091709)
tissue: skin psoriatic involveddisease state:. (skin)
SRR553576(SRX182782)
source: Testis. (testes)
SRR330858(SRX091696)
tissue: skin psoriatic involveddisease state:. (skin)
SRR330902(SRX091740)
tissue: skin psoriatic uninvolveddisease stat. (skin)
SRR039613(GSM531976)
Human Normal Liver Tissue Sample 3. (liver)
SRR039622(GSM531985)
HCV(+) Adjacent Tissue Sample. (liver)
SRR326282(GSM769512)
"Dicer mRNA was knocked down using siDicer, t. (cell line)
SRR342897(SRX096793)
small RNA seq of Left atrial tissue. (heart)
SRR342898(SRX096794)
small RNA seq of Right atrial tissue. (heart)
DRR001485(DRX001039)
"Hela long total cell fraction, LNA(+)". (hela)
SRR330920(SRX091758)
tissue: normal skindisease state: normal. (skin)
SRR326281(GSM769511)
"Dicer mRNA was knocked down using siDicer, c. (cell line)
SRR330874(SRX091712)
tissue: skin psoriatic involveddisease state:. (skin)
SRR330921(SRX091759)
tissue: normal skindisease state: normal. (skin)
SRR033719(GSM497064)
6hr Activated B cell line (ABC158). (B cell)
GSM450606(GSM450606)
miRNA sequencing raw reads from post-mortem s. (brain)
SRR330912(SRX091750)
tissue: normal skindisease state: normal. (skin)
SRR033718(GSM497063)
Multiple Myeloma (U266). (B cell)
SRR037936(GSM510474)
293cand1. (cell line)
SRR330883(SRX091721)
tissue: skin psoriatic uninvolveddisease stat. (skin)
GSM532876(GSM532876)
G547T. (cervix)
SRR330881(SRX091719)
tissue: skin psoriatic uninvolveddisease stat. (skin)
SRR040010(GSM532895)
G529N. (cervix)
SRR039615(GSM531978)
Severe Chronic Hepatitis B Liver Tissue. (liver)
SRR039625(GSM531988)
HBV(-) HCV(-) HCC Tissue Sample. (liver)
SRR039620(GSM531983)
HBV(+) Adjacent Tissue Sample 2. (liver)
SRR330888(SRX091726)
tissue: skin psoriatic uninvolveddisease stat. (skin)
GSM450607(GSM450607)
miRNA sequencing raw reads from post-mortem s. (brain)
SRR330913(SRX091751)
tissue: normal skindisease state: normal. (skin)
SRR330906(SRX091744)
tissue: normal skindisease state: normal. (skin)
SRR330892(SRX091730)
tissue: skin psoriatic uninvolveddisease stat. (skin)
SRR040029(GSM532914)
G026T. (cervix)
SRR191590(GSM715700)
48genomic small RNA (size selected RNA from t. (breast)
SRR330907(SRX091745)
tissue: normal skindisease state: normal. (skin)
SRR040028(GSM532913)
G026N. (cervix)
SRR040011(GSM532896)
G529T. (cervix)
SRR189783SRR330885(SRX091723)
tissue: skin psoriatic uninvolveddisease stat. (skin)
SRR191492(GSM715602)
154genomic small RNA (size selected RNA from . (breast)
SRR330891(SRX091729)
tissue: skin psoriatic uninvolveddisease stat. (skin)
SRR094131(GSM651907)
small RNA(18-35nt)small RNA deep sequencing o. (uterus)
SRR037876(GSM522374)
fibroblasts_cell_culture. (fibroblast)
SRR189782SRR037937(GSM510475)
293cand2. (cell line)
GSM956925PazD5(GSM956925)
"cell line: HEK293 cell linepassages: 15-20ip. (cell line)
SRR039617(GSM531980)
HBV(+) Adjacent Tissue Sample 1. (liver)
SRR330909(SRX091747)
tissue: normal skindisease state: normal. (skin)
SRR033726(GSM497071)
Mututated CLL (CLLM633). (B cell)
SRR095854(SRX039177)
"miRNA were isolated from FirstChoice Human B. (brain)
SRR330884(SRX091722)
tissue: skin psoriatic uninvolveddisease stat. (skin)
GSM450603(GSM450603)
miRNA sequencing raw reads from post-mortem s. (brain)
SRR330917(SRX091755)
tissue: normal skindisease state: normal. (skin)
SRR040025(GSM532910)
G613T. (cervix)
SRR330896(SRX091734)
tissue: skin psoriatic uninvolveddisease stat. (skin)
SRR015447(SRR015447)
nuclear small RNAs. (breast)
SRR207114(GSM721076)
"IP against AGO 1 & 2, RRP40 knockdown". (ago1/2 RRP40 cell line)
SRR330899(SRX091737)
tissue: skin psoriatic uninvolveddisease stat. (skin)
GSM450610(GSM450610)
miRNA sequencing raw reads from post-mortem s. (brain)
SRR033720(GSM497065)
EBV activated B cell line (EBV159). (B cell)
SRR191548(GSM715658)
101genomic small RNA (size selected RNA from . (breast)
SRR390723(GSM850202)
total small RNA. (cell line)
SRR037941(GSM510479)
293DroshaTN. (cell line)
SRR191524(GSM715634)
119genomic small RNA (size selected RNA from . (breast)
SRR330862(SRX091700)
tissue: skin psoriatic involveddisease state:. (skin)
TAX577579(Rovira)
total RNA. (breast)
SRR330870(SRX091708)
tissue: skin psoriatic involveddisease state:. (skin)
SRR330894(SRX091732)
tissue: skin psoriatic uninvolveddisease stat. (skin)
SRR444053(SRX128901)
Sample 13cDNABarcode: AF-PP-341: ACG CTC TTC . (skin)
SRR060169(GSM565979)
5-8F_cytoplasm. (cell line)
SRR191591(GSM715701)
53genomic small RNA (size selected RNA from t. (breast)
GSM956925Ago2PAZ(GSM956925)
"cell line: HEK293 cell linepassages: 15-20ip. (ago2 cell line)
GSM450605(GSM450605)
miRNA sequencing raw reads from post-mortem s. (brain)
SRR330893(SRX091731)
tissue: skin psoriatic uninvolveddisease stat. (skin)
SRR033723(GSM497068)
L1236 cell line (L1236). (B cell)
SRR387909(GSM843861)
specific-host: Homo sapienshost cell line: Su. (cell line)
SRR039623(GSM531986)
HCV(+) HCC Tissue Sample. (liver)
SRR330895(SRX091733)
tissue: skin psoriatic uninvolveddisease stat. (skin)
SRR330859(SRX091697)
tissue: skin psoriatic involveddisease state:. (skin)
TAX577743(Rovira)
total RNA. (breast)
SRR029125(GSM416754)
U2OS. (cell line)
SRR040040(GSM532925)
G612N. (cervix)
SRR330914(SRX091752)
tissue: normal skindisease state: normal. (skin)
SRR330916(SRX091754)
tissue: normal skindisease state: normal. (skin)
......................................................................................................................................................................................CGTGCTTTTGCCCTTCTT........ 185.000.00----1.00-----------------------------------1.00------------------------------------------1.001.00---------------1.00--------
........................................................................................................................................CTGGGGAGGGGGTGGAGTCAGA.................................................. 2212.002.00------2.00------------------------------------------------------------------------------------------------------
............................................................................................................................................ACTCCACCCCCTCCCATAC................................................. 191.000.00----------------------------------------------1.00--------------------------------------------------------------
................................................................................................................................................CACCCCCTCCCCAGAACC.............................................. 181.000.00---------------------------------------------------------1.00---------------------------------------------------
.......................TGTGGACAGAATCCTGTGAT..................................................................................................................................................................... 201.000.00-----------------------------------------------------------------------------------------------------1.00-------
...................................................................................................................................GCACCTCTGACTCCATTT........................................................... 181.000.00---------------------------------------------------------------------1.00---------------------------------------