ID: uc002fxz.3_intron_8_0_chr17_4447942_r
GENE: (18)
chr17:4447892-4448095-


(1)
AGO2.ip
(3)
B-CELL
(5)
BRAIN
(23)
BREAST
(19)
CELL-LINE
(10)
CERVIX
(4)
HEART
(5)
LIVER
(1)
OTHER
(44)
SKIN
(1)
UTERUS
(1)
XRN.ip

Sense strand
AGAACAAGCTGCAGAAGGAGAAGGCTCTGCGGCGCGACTTCCAGATCCGGGTGAGCCTGGGGGCGGGCCGCACCCACCCCCGCCTCCCTGTGCGCCCACCCCCGCCTCCCTGTGCGCCCACCCCCGTGTTGCTGACCTGCCCTCCTGGCTGCAGGTGCTGGACCTGGTGGAGGTGCTAGTGACCAAGCAGCCCGAGAATGCCCT
........................................................................................((.((((.((............)).)))).))....................................................................................
.....................................................................................86..............................................134....................................................................
SizePerfect hitTotal NormPerfect NormTAX577589(Rovira)
total RNA. (breast)
TAX577743(Rovira)
total RNA. (breast)
TAX577741(Rovira)
total RNA. (breast)
SRR330875(SRX091713)
tissue: skin psoriatic involveddisease state:. (skin)
TAX577744(Rovira)
total RNA. (breast)
SRR037944(GSM510482)
293DcrTN_cand5. (cell line)
SRR330879(SRX091717)
tissue: skin psoriatic involveddisease state:. (skin)
TAX577579(Rovira)
total RNA. (breast)
TAX577738(Rovira)
total RNA. (breast)
SRR037937(GSM510475)
293cand2. (cell line)
SRR330861(SRX091699)
tissue: skin psoriatic involveddisease state:. (skin)
SRR037942(GSM510480)
293DroshaTN_cand5. (cell line)
SRR330907(SRX091745)
tissue: normal skindisease state: normal. (skin)
SRR189782GSM532876(GSM532876)
G547T. (cervix)
SRR037941(GSM510479)
293DroshaTN. (cell line)
SRR207115(GSM721077)
XRN1&2 knockdown. (XRN1/XRN2 cell line)
SRR330904(SRX091742)
tissue: normal skindisease state: normal. (skin)
SRR330903(SRX091741)
tissue: skin psoriatic uninvolveddisease stat. (skin)
TAX577746(Rovira)
total RNA. (breast)
SRR330890(SRX091728)
tissue: skin psoriatic uninvolveddisease stat. (skin)
SRR330889(SRX091727)
tissue: skin psoriatic uninvolveddisease stat. (skin)
SRR037935(GSM510473)
293cand3. (cell line)
SRR330922(SRX091760)
tissue: normal skindisease state: normal. (skin)
SRR037943(GSM510481)
293DcrTN. (cell line)
SRR037938(GSM510476)
293Red. (cell line)
SRR029131(GSM416760)
MCF7. (cell line)
SRR033712(GSM497057)
Burkitt Lymphoma (BL510). (B cell)
SRR039616(GSM531979)
HBV(+) Distal Tissue Sample 1. (liver)
SRR040029(GSM532914)
G026T. (cervix)
SRR553573(SRX182779)
source: Cerebellum. (Cerebellum)
SRR094132(GSM651908)
small RNA(18-35nt)small RNA deep sequencing o. (uterus)
SRR189779(GSM714639)
cell line: HEK293clip variant: PAR-CLIPenzyma. (cell line)
SRR039622(GSM531985)
HCV(+) Adjacent Tissue Sample. (liver)
SRR015360(GSM380325)
Plasma B cells (PC137). (B cell)
SRR330905(SRX091743)
tissue: normal skindisease state: normal. (skin)
SRR191554(GSM715664)
99genomic small RNA (size selected RNA from t. (breast)
SRR330915(SRX091753)
tissue: normal skindisease state: normal. (skin)
SRR330908(SRX091746)
tissue: normal skindisease state: normal. (skin)
TAX577588(Rovira)
total RNA. (breast)
TAX577742(Rovira)
total RNA. (breast)
SRR330874(SRX091712)
tissue: skin psoriatic involveddisease state:. (skin)
TAX577745(Rovira)
total RNA. (breast)
SRR330888(SRX091726)
tissue: skin psoriatic uninvolveddisease stat. (skin)
SRR330883(SRX091721)
tissue: skin psoriatic uninvolveddisease stat. (skin)
SRR037940(GSM510478)
293cand5_rep2. (cell line)
SRR330906(SRX091744)
tissue: normal skindisease state: normal. (skin)
SRR330910(SRX091748)
tissue: normal skindisease state: normal. (skin)
SRR191548(GSM715658)
101genomic small RNA (size selected RNA from . (breast)
SRR330868(SRX091706)
tissue: skin psoriatic involveddisease state:. (skin)
SRR553574(SRX182780)
source: Heart. (Heart)
SRR037936(GSM510474)
293cand1. (cell line)
SRR330897(SRX091735)
tissue: skin psoriatic uninvolveddisease stat. (skin)
SRR330921(SRX091759)
tissue: normal skindisease state: normal. (skin)
SRR330913(SRX091751)
tissue: normal skindisease state: normal. (skin)
RoviraIPAgo2(Rovira)
total RNA. (ago2 breast)
SRR343334SRR330872(SRX091710)
tissue: skin psoriatic involveddisease state:. (skin)
SRR191398(GSM715508)
35genomic small RNA (size selected RNA from t. (breast)
SRR189784TAX577580(Rovira)
total RNA. (breast)
SRR039625(GSM531988)
HBV(-) HCV(-) HCC Tissue Sample. (liver)
SRR191465(GSM715575)
113genomic small RNA (size selected RNA from . (breast)
SRR060984(GSM569188)
Human plasma cell [09-001]. (cell line)
SRR191406(GSM715516)
67genomic small RNA (size selected RNA from t. (breast)
SRR330917(SRX091755)
tissue: normal skindisease state: normal. (skin)
SRR040025(GSM532910)
G613T. (cervix)
SRR189780(GSM714640)
cell line: HEK293clip variant: PAR-CLIPenzyma. (cell line)
GSM450610(GSM450610)
miRNA sequencing raw reads from post-mortem s. (brain)
SRR330919(SRX091757)
tissue: normal skindisease state: normal. (skin)
SRR330901(SRX091739)
tissue: skin psoriatic uninvolveddisease stat. (skin)
SRR040012(GSM532897)
G648N. (cervix)
GSM450600(GSM450600)
miRNA sequencing raw reads from post-mortem s. (brain)
SRR029132(GSM416761)
MB-MDA231. (cell line)
SRR037934(GSM510472)
293cand4_rep3. (cell line)
SRR038863(GSM458546)
MM603. (cell line)
GSM450599(GSM450599)
miRNA sequencing raw reads from post-mortem s. (brain)
SRR191591(GSM715701)
53genomic small RNA (size selected RNA from t. (breast)
SRR033728(GSM497073)
MALT (MALT413). (B cell)
GSM450605(GSM450605)
miRNA sequencing raw reads from post-mortem s. (brain)
SRR330876(SRX091714)
tissue: skin psoriatic involveddisease state:. (skin)
SRR326281(GSM769511)
"Dicer mRNA was knocked down using siDicer, c. (cell line)
SRR191553(GSM715663)
96genomic small RNA (size selected RNA from t. (breast)
SRR330895(SRX091733)
tissue: skin psoriatic uninvolveddisease stat. (skin)
SRR040036(GSM532921)
G243N. (cervix)
GSM532881(GSM532881)
G696N. (cervix)
TAX577740(Rovira)
total RNA. (breast)
SRR330909(SRX091747)
tissue: normal skindisease state: normal. (skin)
SRR330902(SRX091740)
tissue: skin psoriatic uninvolveddisease stat. (skin)
TAX577590(Rovira)
total RNA. (breast)
SRR444053(SRX128901)
Sample 13cDNABarcode: AF-PP-341: ACG CTC TTC . (skin)
SRR330867(SRX091705)
tissue: skin psoriatic involveddisease state:. (skin)
GSM532889(GSM532889)
G576N. (cervix)
SRR330914(SRX091752)
tissue: normal skindisease state: normal. (skin)
SRR040010(GSM532895)
G529N. (cervix)
SRR342894(SRX096790)
small RNA seq of Right atrial tissue. (heart)
SRR330911(SRX091749)
tissue: normal skindisease state: normal. (skin)
SRR039617(GSM531980)
HBV(+) Adjacent Tissue Sample 1. (liver)
TAX577739(Rovira)
total RNA. (breast)
SRR040014(GSM532899)
G623N. (cervix)
SRR444057(SRX128905)
Sample 15cDNABarcode: AF-PP-334: ACG CTC TTC . (skin)
SRR330860(SRX091698)
tissue: skin psoriatic involveddisease state:. (skin)
SRR342895(SRX096791)
small RNA seq of Left atrial tissue. (heart)
SRR342897(SRX096793)
small RNA seq of Left atrial tissue. (heart)
SRR330866(SRX091704)
tissue: skin psoriatic involveddisease state:. (skin)
SRR330878(SRX091716)
tissue: skin psoriatic involveddisease state:. (skin)
SRR330886(SRX091724)
tissue: skin psoriatic uninvolveddisease stat. (skin)
SRR330892(SRX091730)
tissue: skin psoriatic uninvolveddisease stat. (skin)
SRR040007(GSM532892)
G601T. (cervix)
SRR330896(SRX091734)
tissue: skin psoriatic uninvolveddisease stat. (skin)
SRR330899(SRX091737)
tissue: skin psoriatic uninvolveddisease stat. (skin)
SRR191417(GSM715527)
39genomic small RNA (size selected RNA from t. (breast)
SRR330862(SRX091700)
tissue: skin psoriatic involveddisease state:. (skin)
SRR029130(GSM416759)
DLD2. (cell line)
GSM450598(GSM450598)
miRNA sequencing raw reads from post-mortem s. (brain)
SRR039624(GSM531987)
HBV(-) HCV(-) Adjacent Tissue Sample. (liver)
SRR330859(SRX091697)
tissue: skin psoriatic involveddisease state:. (skin)
SRR330894(SRX091732)
tissue: skin psoriatic uninvolveddisease stat. (skin)
..........................................................................................TGCGCCCACCCCCGCGGG................................................................................................18348.333.334.003.674.005.003.00-4.672.671.00-5.33-0.67----1.00-1.00-0.67-0.67-----------0.330.330.33-0.330.33-0.67-0.67--0.33-0.330.33-1.000.330.33----------------------------0.330.330.330.330.670.33--0.330.33-0.330.33--0.330.33--0.33--0.330.33-----------
...........................................................................................GCGCCCACCCCCGCCGGGA..............................................................................................1925.000.00--1.00-1.009.00---2.00-3.00---2.00------2.00-2.001.00------------------------------------1.00----------1.00--------------------------------------------
..........................................................................................TGCGCCCACCCCCGCGG.................................................................................................17320.003.331.670.332.333.330.33-3.001.000.33-0.33-0.67------0.330.330.33-0.33-----------0.330.33-0.33--0.33-0.330.33-0.33---0.67--0.33-----------------------------0.33----0.33-0.33--0.33--0.33-------0.33-------------
...........................................................................................GCGCCCACCCCCGCCGG................................................................................................1719.000.006.00---3.00-------2.00----1.00--1.00-----------------1.00----1.00----1.00---------1.00-----1.001.00----------------------------------------------------
...........................................................................................GCGCCCACCCCCGCCGGG...............................................................................................1815.000.00-3.001.00-----2.001.00-----------------------1.00-1.001.00--------1.00-1.00------------------1.00----------1.00----1.00-----------------------------------
..........................................................................................TGCGCCCACCCCCGCGGGG...............................................................................................19310.673.330.670.331.331.671.00--0.33--0.33-0.67----0.33-----------------0.330.33----0.330.67-----0.33-0.33---0.33-----------------------------0.33------------0.33--0.330.33----------------
.................................................................................................................GCGCCCACCCCCGTGGG..........................................................................1744.250.750.250.50--0.25-------0.25-----0.25-0.500.25-0.25-------------0.50-----0.25---------0.25-------------------------------------------------------0.25----0.25-0.25-
....................................................................CGCACCCACCCCCGCGGG......................................................................................................................184.000.001.001.001.00------------------------------------1.00------------------------------------------------------------------------------
..........................................................................................TGCGCCCACCCCCGC...................................................................................................1533.333.33---0.67--1.33---0.67---------------------------------0.33----------------------------------------------------------0.33--------------
.................................................................................................................GCGCCCACCCCCGTGGGGA........................................................................1943.250.75-----0.50---0.25-0.25----------0.25-0.250.250.25------------------0.50-----0.25--------------------------------------------------------0.25------0.25--
...........................................................................................GCGCCCACCCCCGCCGGCA..............................................................................................193.000.00-----------1.00---1.00---------1.00--------------------------------------------------------------------------------------------
.................................................................................................................GCGCCCACCCCCGTGG...........................................................................1642.750.75-----------------0.250.25-0.50-------------------------------0.250.250.50----------------------------0.25-----------------------0.25--0.25-------
..............AAGGAGAAGGCTCTGCGGC...........................................................................................................................................................................1912.002.00-------------------------------2.00--------------------------------------------------------------------------------------
...............................................................................................................................................................................CTAGTGACCAAGCAGCCCGAGAATGCCCT2912.002.00----------------------------------2.00-----------------------------------------------------------------------------------
...................................................................CCGCACCCACCCCCGCGGG......................................................................................................................192.000.00-------1.001.00-------------------------------------------------------------------------------------------------------------
....................................................................CGCACCCACCCCCGCCG.......................................................................................................................172.000.00----1.00---1.00-------------------------------------------------------------------------------------------------------------
...............AGGAGAAGGCTCTGCGGCG..........................................................................................................................................................................1912.002.00----------------1.00-----------1.00-----------------------------------------------------------------------------------------
...............AGGAGAAGGCTCTGCGGCGCG........................................................................................................................................................................2112.002.00---------------------------------------------------------------1.00-----------1.00------------------------------------------
...ACAAGCTGCAGAAGGAGAAGG....................................................................................................................................................................................2112.002.00----------------2.00-----------------------------------------------------------------------------------------------------
.................................GCGACTTCCAGATCCGG..........................................................................................................................................................1712.002.00-------------------------------------1.00--------1.00-----------------------------------------------------------------------
........CTGCAGAAGGAGAAGGCTCTGT..............................................................................................................................................................................222.000.00---------------------------2.00------------------------------------------------------------------------------------------
..................................................................................................................CGCCCACCCCCGTGTGGA........................................................................182.000.00---------1.00----------------1.00-------------------------------------------------------------------------------------------
..........................................................................................TGCGCCCACCCCCGCGGGA...............................................................................................1931.333.330.67-0.330.33------------------------------------------------------------------------------------------------------------------
..........................................................................................TGCGCCCACCCCCGCGTG................................................................................................1831.333.33---0.67---0.33-------------------------------0.33------------------------------------------------------------------------------
.........................................................................................GTGCGCCCACCCCCGCGGGG...............................................................................................201.000.001.00---------------------------------------------------------------------------------------------------------------------
...........................................................................................GCGCCCACCCCCGCCGCGA..............................................................................................191.000.00---------1.00------------------------------------------------------------------------------------------------------------
...............AGGAGAAGGCTCTGCGGCGCGACTTCCA.................................................................................................................................................................2811.001.00---------------------------------------------------------------------1.00------------------------------------------------
......................GGCTCTGCGGCGCGAGGGA...................................................................................................................................................................191.000.00-----------1.00----------------------------------------------------------------------------------------------------------
..........................................................................................TGCGCCCACCCCCGCTGG................................................................................................1831.003.330.67-0.33-------------------------------------------------------------------------------------------------------------------
...................................................................................................................................................................CTGGTGGAGGTGCTAAAC.......................181.000.00---------------------------------------------------------1.00------------------------------------------------------------
....................................................................CGCACCCACCCCCGCGGGG.....................................................................................................................191.000.00-------1.00--------------------------------------------------------------------------------------------------------------
...........................................................................................GCGCCCACCCCCGCCGGC...............................................................................................181.000.00-1.00--------------------------------------------------------------------------------------------------------------------
....................AAGGCTCTGCGGCGCGACTTCCAGATCCGGGCG.......................................................................................................................................................331.000.00-------------------------------------------------------------------1.00--------------------------------------------------
......................GGCTCTGCGGCGCGAAGGA...................................................................................................................................................................191.000.00------------------------------------------------------------------------1.00---------------------------------------------
.............................................TCCGGGTGAGCCTGGGGG.............................................................................................................................................1811.001.00------------------------------1.00---------------------------------------------------------------------------------------
..............AAGGAGAAGGCTCTGCG.............................................................................................................................................................................1711.001.00----------------------------------------------------------------------------1.00-----------------------------------------
..............................................................................................................................................................TGGACCTGGTGGAGGACT............................181.000.00-------------------------------------------------1.00--------------------------------------------------------------------
................................................................................................................................................................................TAGTGACCAAGCAGCCCGAT........201.000.00-------------1.00--------------------------------------------------------------------------------------------------------
..................AGAAGGCTCTGCGGCGCGACTTCCA.................................................................................................................................................................2511.001.00--------------------------------------------------------------------1.00-------------------------------------------------
..........................................................................................................................................................................AGGTGCTAGTGACCAAGCAGCCCGAGAATGC...3111.001.00----------------------------------------------------------------------1.00-----------------------------------------------
.............GAAGGAGAAGGCTCTGCGGCGCG........................................................................................................................................................................2311.001.00-------------------------------------------------------1.00--------------------------------------------------------------
........................................................................................................................................................................................AAGCAGCCCGAGAATATTG.191.000.00-------------1.00--------------------------------------------------------------------------------------------------------
.....................AGGCTCTGCGGCGCGA.......................................................................................................................................................................1611.001.00---------------------------------------------------------------------------------1.00------------------------------------
..................................................................................................................CGCCCACCCCCGTGTTGA........................................................................181.000.00---------1.00------------------------------------------------------------------------------------------------------------
....CAAGCTGCAGAAGGAGAAGGCT..................................................................................................................................................................................2211.001.00---------------------------------1.00------------------------------------------------------------------------------------
....................................................................CGCACCCACCCCCGCTGGG.....................................................................................................................191.000.001.00---------------------------------------------------------------------------------------------------------------------
..................................................................................................................CGCCCACCCCCGTGTGGAA.......................................................................191.000.00--------------------------1.00-------------------------------------------------------------------------------------------
..AACAAGCTGCAGAAGGAG........................................................................................................................................................................................1811.001.00-----------------------------------------1.00----------------------------------------------------------------------------
...................................................................CCGCACCCACCCCCGCGGTT.....................................................................................................................201.000.00------------------------------------------------------------------------------1.00---------------------------------------
..................AGAAGGCTCTGCGGCGCGACTCCAG.................................................................................................................................................................251.000.00--------------------------------1.00-------------------------------------------------------------------------------------
..........................................................................................TGCGCCCACCCCCGCCGTG...............................................................................................191.000.001.00---------------------------------------------------------------------------------------------------------------------
..........................................................................................TGCGCCCACCCCCGCGGTG...............................................................................................1931.003.33--0.33----0.330.33-------------------------------------------------------------------------------------------------------------
..........GCAGAAGGAGAAGGCTCTG...............................................................................................................................................................................1911.001.00-------------------------------------------------------------------------------1.00--------------------------------------
....................................................................CGCACCCACCCCCGCCTAGTC...................................................................................................................211.000.00--------1.00-------------------------------------------------------------------------------------------------------------
................................................................................................................TGCGCCCACCCCCGTGGG..........................................................................181.000.00-1.00--------------------------------------------------------------------------------------------------------------------
...........................................................................................GCGCCCACCCCCGCCGGGC..............................................................................................191.000.00--------------------------------------------------------------------------1.00-------------------------------------------
...................................................................CCGCACCCACCCCCGCGG.......................................................................................................................181.000.00----1.00-----------------------------------------------------------------------------------------------------------------
...............AGGAGAAGGCTCTGCGGCGCGAC......................................................................................................................................................................2311.001.00-----------------------1.00----------------------------------------------------------------------------------------------
.................................................................................................................GCGCCCACCCCCGTGGGG.........................................................................1841.000.75-0.25-----0.25-------------------------------------------------------------------------------------------------------0.250.25-----
..............AAGGAGAAGGCTCTGCCG............................................................................................................................................................................181.000.00-----------------------------------------------------------------------1.00----------------------------------------------
...................................................................CCGCACCCACCCCCGCGGGG.....................................................................................................................201.000.001.00---------------------------------------------------------------------------------------------------------------------
........................................................CTGGGGGCGGGCCGCGGC..................................................................................................................................181.000.00--------1.00-------------------------------------------------------------------------------------------------------------
..................................................................................................................CGCCCACCCCCGTGTGGAT.......................................................................191.000.00---------1.00------------------------------------------------------------------------------------------------------------
.................................................................................................................GCGCCCACCCCCGTGTA..........................................................................171.000.00-1.00--------------------------------------------------------------------------------------------------------------------
..............AAGGAGAAGGCTCTGCGGCG..........................................................................................................................................................................2011.001.00----------------------------1.00-----------------------------------------------------------------------------------------
........................................................................................................................................................................................AAGCAGCCCGAGAATATTC.191.000.00-----------------------------------------------------------1.00----------------------------------------------------------
...............AGGAGAAGGCTCTGCGGCGCGACTTCCAGA...............................................................................................................................................................3011.001.00-------------------------------------------------------------1.00--------------------------------------------------------
...................................................................CCGCACCCACCCCCGCGCG......................................................................................................................191.000.00----------------------------------------1.00-----------------------------------------------------------------------------
.................................................................................................................GCGCCCACCCCCGTG............................................................................1540.750.75------0.25-------------------------------------0.25---------------------------------------------0.25---------------------------
..........................................................................................TGCGCCCACCCCCGCGGT................................................................................................1830.673.33------------------------------------------0.33----------------------------------------------0.33----------------------------
..........................................................................................TGCGCCCACCCCCGCTGT................................................................................................1830.673.33--0.67-------------------------------------------------------------------------------------------------------------------
..........................................................................................TGCGCCCACCCCCGCTGGG...............................................................................................1930.673.33-0.67--------------------------------------------------------------------------------------------------------------------
..........................................................................................TGCGCCCACCCCCGCGGCG...............................................................................................1930.673.33----0.33---0.33-------------------------------------------------------------------------------------------------------------
..........................................................................................TGCGCCCACCCCCGCAGG................................................................................................1830.673.33--0.33-----------------------------------------------------------------------------------0.33-------------------------------
..........................................................................................TGCGCCCACCCCCGCGA.................................................................................................1730.673.33----0.33-----------------------------------0.33-----------------------------------------------------------------------------
..........................................................................................TGCGCCCACCCCCGCGGAA...............................................................................................1930.333.33-------0.33--------------------------------------------------------------------------------------------------------------
..........................................................................................TGCGCCCACCCCCGCGC.................................................................................................1730.333.33----0.33-----------------------------------------------------------------------------------------------------------------
..........................................................................................TGCGCCCACCCCCGCAA.................................................................................................1730.333.33-------0.33--------------------------------------------------------------------------------------------------------------
..........................................................................................TGCGCCCACCCCCGCGTT................................................................................................1830.333.33-------------------------------------------------------------------------------------0.33--------------------------------
..........................................................................................TGCGCCCACCCCCGCGCG................................................................................................1830.333.330.33---------------------------------------------------------------------------------------------------------------------
..........................................................................................TGCGCCCACCCCCGCT..................................................................................................1630.333.33---0.33------------------------------------------------------------------------------------------------------------------
..........................................................................................TGCGCCCACCCCCGCGGA................................................................................................1830.333.33-0.33--------------------------------------------------------------------------------------------------------------------
..........................................................................................TGCGCCCACCCCCGCGAA................................................................................................1830.333.33-------0.33--------------------------------------------------------------------------------------------------------------
..........................................................................................TGCGCCCACCCCCGCTTGG...............................................................................................1930.333.33--0.33-------------------------------------------------------------------------------------------------------------------
..........................................................................................TGCGCCCACCCCCGCGCGG...............................................................................................1930.333.33-------0.33--------------------------------------------------------------------------------------------------------------
..........................................................................................TGCGCCCACCCCCGCGAAC...............................................................................................1930.333.33-------0.33--------------------------------------------------------------------------------------------------------------
..........................................................................................TGCGCCCACCCCCGCGAG................................................................................................1830.333.33--------------------------------------0.33-------------------------------------------------------------------------------
..........................................................................................TGCGCCCACCCCCGCTT.................................................................................................1730.333.330.33---------------------------------------------------------------------------------------------------------------------
..........................................................................................TGCGCCCACCCCCGCAGGG...............................................................................................1930.333.33-------0.33--------------------------------------------------------------------------------------------------------------
.................................................................................................................GCGCCCACCCCCGTGGGTA........................................................................1940.250.75-----------------------------------------------------------------------------------------------------------------0.25----
.................................................................................................................GCGCCCACCCCCGTGGGAA........................................................................1940.250.75-----------------------------------------------------------------------------------------0.25----------------------------
...............AGGAGAAGGCTCTGCG.............................................................................................................................................................................1650.200.20---------------------------------------------------------------------------------------------------------------------0.20
.......GCTGCAGAAGGAGAAGG....................................................................................................................................................................................1780.120.12-------------------------------------------------------0.12--------------------------------------------------------------

Antisense strand
AGAACAAGCTGCAGAAGGAGAAGGCTCTGCGGCGCGACTTCCAGATCCGGGTGAGCCTGGGGGCGGGCCGCACCCACCCCCGCCTCCCTGTGCGCCCACCCCCGCCTCCCTGTGCGCCCACCCCCGTGTTGCTGACCTGCCCTCCTGGCTGCAGGTGCTGGACCTGGTGGAGGTGCTAGTGACCAAGCAGCCCGAGAATGCCCT
........................................................................................((.((((.((............)).)))).))....................................................................................
.....................................................................................86..............................................134....................................................................
SizePerfect hitTotal NormPerfect NormTAX577589(Rovira)
total RNA. (breast)
TAX577743(Rovira)
total RNA. (breast)
TAX577741(Rovira)
total RNA. (breast)
SRR330875(SRX091713)
tissue: skin psoriatic involveddisease state:. (skin)
TAX577744(Rovira)
total RNA. (breast)
SRR037944(GSM510482)
293DcrTN_cand5. (cell line)
SRR330879(SRX091717)
tissue: skin psoriatic involveddisease state:. (skin)
TAX577579(Rovira)
total RNA. (breast)
TAX577738(Rovira)
total RNA. (breast)
SRR037937(GSM510475)
293cand2. (cell line)
SRR330861(SRX091699)
tissue: skin psoriatic involveddisease state:. (skin)
SRR037942(GSM510480)
293DroshaTN_cand5. (cell line)
SRR330907(SRX091745)
tissue: normal skindisease state: normal. (skin)
SRR189782GSM532876(GSM532876)
G547T. (cervix)
SRR037941(GSM510479)
293DroshaTN. (cell line)
SRR207115(GSM721077)
XRN1&2 knockdown. (XRN1/XRN2 cell line)
SRR330904(SRX091742)
tissue: normal skindisease state: normal. (skin)
SRR330903(SRX091741)
tissue: skin psoriatic uninvolveddisease stat. (skin)
TAX577746(Rovira)
total RNA. (breast)
SRR330890(SRX091728)
tissue: skin psoriatic uninvolveddisease stat. (skin)
SRR330889(SRX091727)
tissue: skin psoriatic uninvolveddisease stat. (skin)
SRR037935(GSM510473)
293cand3. (cell line)
SRR330922(SRX091760)
tissue: normal skindisease state: normal. (skin)
SRR037943(GSM510481)
293DcrTN. (cell line)
SRR037938(GSM510476)
293Red. (cell line)
SRR029131(GSM416760)
MCF7. (cell line)
SRR033712(GSM497057)
Burkitt Lymphoma (BL510). (B cell)
SRR039616(GSM531979)
HBV(+) Distal Tissue Sample 1. (liver)
SRR040029(GSM532914)
G026T. (cervix)
SRR553573(SRX182779)
source: Cerebellum. (Cerebellum)
SRR094132(GSM651908)
small RNA(18-35nt)small RNA deep sequencing o. (uterus)
SRR189779(GSM714639)
cell line: HEK293clip variant: PAR-CLIPenzyma. (cell line)
SRR039622(GSM531985)
HCV(+) Adjacent Tissue Sample. (liver)
SRR015360(GSM380325)
Plasma B cells (PC137). (B cell)
SRR330905(SRX091743)
tissue: normal skindisease state: normal. (skin)
SRR191554(GSM715664)
99genomic small RNA (size selected RNA from t. (breast)
SRR330915(SRX091753)
tissue: normal skindisease state: normal. (skin)
SRR330908(SRX091746)
tissue: normal skindisease state: normal. (skin)
TAX577588(Rovira)
total RNA. (breast)
TAX577742(Rovira)
total RNA. (breast)
SRR330874(SRX091712)
tissue: skin psoriatic involveddisease state:. (skin)
TAX577745(Rovira)
total RNA. (breast)
SRR330888(SRX091726)
tissue: skin psoriatic uninvolveddisease stat. (skin)
SRR330883(SRX091721)
tissue: skin psoriatic uninvolveddisease stat. (skin)
SRR037940(GSM510478)
293cand5_rep2. (cell line)
SRR330906(SRX091744)
tissue: normal skindisease state: normal. (skin)
SRR330910(SRX091748)
tissue: normal skindisease state: normal. (skin)
SRR191548(GSM715658)
101genomic small RNA (size selected RNA from . (breast)
SRR330868(SRX091706)
tissue: skin psoriatic involveddisease state:. (skin)
SRR553574(SRX182780)
source: Heart. (Heart)
SRR037936(GSM510474)
293cand1. (cell line)
SRR330897(SRX091735)
tissue: skin psoriatic uninvolveddisease stat. (skin)
SRR330921(SRX091759)
tissue: normal skindisease state: normal. (skin)
SRR330913(SRX091751)
tissue: normal skindisease state: normal. (skin)
RoviraIPAgo2(Rovira)
total RNA. (ago2 breast)
SRR343334SRR330872(SRX091710)
tissue: skin psoriatic involveddisease state:. (skin)
SRR191398(GSM715508)
35genomic small RNA (size selected RNA from t. (breast)
SRR189784TAX577580(Rovira)
total RNA. (breast)
SRR039625(GSM531988)
HBV(-) HCV(-) HCC Tissue Sample. (liver)
SRR191465(GSM715575)
113genomic small RNA (size selected RNA from . (breast)
SRR060984(GSM569188)
Human plasma cell [09-001]. (cell line)
SRR191406(GSM715516)
67genomic small RNA (size selected RNA from t. (breast)
SRR330917(SRX091755)
tissue: normal skindisease state: normal. (skin)
SRR040025(GSM532910)
G613T. (cervix)
SRR189780(GSM714640)
cell line: HEK293clip variant: PAR-CLIPenzyma. (cell line)
GSM450610(GSM450610)
miRNA sequencing raw reads from post-mortem s. (brain)
SRR330919(SRX091757)
tissue: normal skindisease state: normal. (skin)
SRR330901(SRX091739)
tissue: skin psoriatic uninvolveddisease stat. (skin)
SRR040012(GSM532897)
G648N. (cervix)
GSM450600(GSM450600)
miRNA sequencing raw reads from post-mortem s. (brain)
SRR029132(GSM416761)
MB-MDA231. (cell line)
SRR037934(GSM510472)
293cand4_rep3. (cell line)
SRR038863(GSM458546)
MM603. (cell line)
GSM450599(GSM450599)
miRNA sequencing raw reads from post-mortem s. (brain)
SRR191591(GSM715701)
53genomic small RNA (size selected RNA from t. (breast)
SRR033728(GSM497073)
MALT (MALT413). (B cell)
GSM450605(GSM450605)
miRNA sequencing raw reads from post-mortem s. (brain)
SRR330876(SRX091714)
tissue: skin psoriatic involveddisease state:. (skin)
SRR326281(GSM769511)
"Dicer mRNA was knocked down using siDicer, c. (cell line)
SRR191553(GSM715663)
96genomic small RNA (size selected RNA from t. (breast)
SRR330895(SRX091733)
tissue: skin psoriatic uninvolveddisease stat. (skin)
SRR040036(GSM532921)
G243N. (cervix)
GSM532881(GSM532881)
G696N. (cervix)
TAX577740(Rovira)
total RNA. (breast)
SRR330909(SRX091747)
tissue: normal skindisease state: normal. (skin)
SRR330902(SRX091740)
tissue: skin psoriatic uninvolveddisease stat. (skin)
TAX577590(Rovira)
total RNA. (breast)
SRR444053(SRX128901)
Sample 13cDNABarcode: AF-PP-341: ACG CTC TTC . (skin)
SRR330867(SRX091705)
tissue: skin psoriatic involveddisease state:. (skin)
GSM532889(GSM532889)
G576N. (cervix)
SRR330914(SRX091752)
tissue: normal skindisease state: normal. (skin)
SRR040010(GSM532895)
G529N. (cervix)
SRR342894(SRX096790)
small RNA seq of Right atrial tissue. (heart)
SRR330911(SRX091749)
tissue: normal skindisease state: normal. (skin)
SRR039617(GSM531980)
HBV(+) Adjacent Tissue Sample 1. (liver)
TAX577739(Rovira)
total RNA. (breast)
SRR040014(GSM532899)
G623N. (cervix)
SRR444057(SRX128905)
Sample 15cDNABarcode: AF-PP-334: ACG CTC TTC . (skin)
SRR330860(SRX091698)
tissue: skin psoriatic involveddisease state:. (skin)
SRR342895(SRX096791)
small RNA seq of Left atrial tissue. (heart)
SRR342897(SRX096793)
small RNA seq of Left atrial tissue. (heart)
SRR330866(SRX091704)
tissue: skin psoriatic involveddisease state:. (skin)
SRR330878(SRX091716)
tissue: skin psoriatic involveddisease state:. (skin)
SRR330886(SRX091724)
tissue: skin psoriatic uninvolveddisease stat. (skin)
SRR330892(SRX091730)
tissue: skin psoriatic uninvolveddisease stat. (skin)
SRR040007(GSM532892)
G601T. (cervix)
SRR330896(SRX091734)
tissue: skin psoriatic uninvolveddisease stat. (skin)
SRR330899(SRX091737)
tissue: skin psoriatic uninvolveddisease stat. (skin)
SRR191417(GSM715527)
39genomic small RNA (size selected RNA from t. (breast)
SRR330862(SRX091700)
tissue: skin psoriatic involveddisease state:. (skin)
SRR029130(GSM416759)
DLD2. (cell line)
GSM450598(GSM450598)
miRNA sequencing raw reads from post-mortem s. (brain)
SRR039624(GSM531987)
HBV(-) HCV(-) Adjacent Tissue Sample. (liver)
SRR330859(SRX091697)
tissue: skin psoriatic involveddisease state:. (skin)
SRR330894(SRX091732)
tissue: skin psoriatic uninvolveddisease stat. (skin)
...........................................................................................GCGCCCACCCCCGCCGGC............................................................................................... 182.000.00--------------2.00-------------------------------------------------------------------------------------------------------
.............................................................................................................................GTGTTGCTGACCTGCTGCG............................................................ 192.000.00------------------2.00---------------------------------------------------------------------------------------------------
.................................................................................................ACCCCCGCCTCCCTGTGCC........................................................................................ 192.000.00-----------------------------2.00----------------------------------------------------------------------------------------
.................................................................................................................................TGCTGACCTGCCCTCCGAT........................................................ 191.000.00--------------1.00-------------------------------------------------------------------------------------------------------
....................................................................................................................CAGCAACACGGGGGTGGG...................................................................... 1811.001.00--------------------------------------------------------------------------------1.00-------------------------------------
.................................................................................................................................................................ACCTGGTGGAGGTGCTTT......................... 181.000.00---------------------------------------------------1.00------------------------------------------------------------------
......................................................................CACCCACCCCCGCCTCCGC................................................................................................................... 191.000.00-------------------1.00--------------------------------------------------------------------------------------------------
...................................................................CCGCACCCACCCCCGCTGGG..................................................................................................................... 201.000.00------------------------------------------------------------1.00---------------------------------------------------------
......................................................................................................................................................ACCAGGTCCAGCACCTGC.................................... 1811.001.00--------------------------------------------------------1.00-------------------------------------------------------------
...........CAGAAGGAGAAGGCTCTGTGG............................................................................................................................................................................ 211.000.00-------------1.00--------------------------------------------------------------------------------------------------------
.CTTCTCCTTCTGCAGCTTGTTC..................................................................................................................................................................................... 2211.001.00---------------------1.00------------------------------------------------------------------------------------------------
...........CAGAAGGAGAAGGCTCTGAC............................................................................................................................................................................. 201.000.00--------------------------------1.00-------------------------------------------------------------------------------------
.TCTCCTTCTGCAGCTTGTTC....................................................................................................................................................................................... 2011.001.00------------------------------1.00---------------------------------------------------------------------------------------