ID: uc002fwc.2_intron_1_0_chr17_3567567_r
GENE: (2)
chr17:3567517-3568022-


(2)
AGO2.ip
(4)
B-CELL
(7)
BRAIN
(7)
BREAST
(17)
CELL-LINE
(4)
CERVIX
(1)
FIBROBLAST
(7)
HEART
(2)
HELA
(1)
KIDNEY
(6)
LIVER
(2)
OTHER
(31)
SKIN
(1)
TESTES
(1)
UTERUS
(1)
XRN.ip

Sense strand
TCGACCAGGATCCTTCCCAGAATCCCTTCTCTGAAGACAAGACGGACAAGGTGAGGGGGTCTGGGGTCCTGGGACCGCTCCATGGGGCACAGGGGCCTGAGATGGTGGGTCTCTGCTTCCTGGGCCTGCATGGAAGGAACAGACTTCATCTCTCAAACCATGCTCTCTAAGAAGGCATCGGAAGTGACCTAGTGAGAATAAGGACGGGTGGGGTGAGGAAGGGCTGCTCAGACAGAGCCCAGGAGGAGCAGGAGGCGGCCATCAGCAGGGCCGGTGCATGGTGGTGCAGCAACTCTGCCCCGGCTCTCTCAGAACAGTCCTCACTGACCATATGTGCTGGGAGAGGCTGGGTGCAGGGACAGAGGGACGGCTGAGAATGTGCCATGCTGGCTTCCGCTGTGTGATAAGGGGCCAGTCCAGTGACCACAGGGCTTGACTTGGGCTGCCCCTTTCCAGGGTATTTATGTCACACGGGTGTCTGAAGGAGGCCCTGCTGAAATCGCTGG
....................................................................................................................................................................................................................................................................................................................................................................(((.((.(((.(((((.((.....(((..((((((((((((...)))....)))))))))...((....))..))).....)).)))))))))).)))....................................................
....................................................................................................................................................................................................................................................................................................................................................................357................................................................................................456................................................
SizePerfect hitTotal NormPerfect NormSRR189782SRR342899(SRX096795)
small RNA seq of Left atrial tissue. (heart)
SRR342901(SRX096797)
small RNA seq of Left atrial tissue. (heart)
SRR314796(SRX084354)
"Total RNA, fractionated (15-30nt)". (cell line)
SRR189779(GSM714639)
cell line: HEK293clip variant: PAR-CLIPenzyma. (cell line)
SRR342894(SRX096790)
small RNA seq of Right atrial tissue. (heart)
SRR387910(GSM843862)
antibody for ip: Ago2. (ago2 cell line)
RoviraIPAgo2(Rovira)
total RNA. (ago2 breast)
SRR330872(SRX091710)
tissue: skin psoriatic involveddisease state:. (skin)
SRR037942(GSM510480)
293DroshaTN_cand5. (cell line)
SRR039625(GSM531988)
HBV(-) HCV(-) HCC Tissue Sample. (liver)
SRR330864(SRX091702)
tissue: skin psoriatic involveddisease state:. (skin)
SRR330874(SRX091712)
tissue: skin psoriatic involveddisease state:. (skin)
SRR189780(GSM714640)
cell line: HEK293clip variant: PAR-CLIPenzyma. (cell line)
SRR330880(SRX091718)
tissue: skin psoriatic involveddisease state:. (skin)
SRR094129(GSM651905)
small RNA(18-35nt)small RNA deep sequencing o. (uterus)
SRR039612(GSM531975)
Human Normal Liver Tissue Sample 2. (liver)
SRR033715(GSM497060)
Mantle Cell Lymphoma (Mino122). (B cell)
TAX577742(Rovira)
total RNA. (breast)
SRR207115(GSM721077)
XRN1&2 knockdown. (XRN1/XRN2 cell line)
SRR342897(SRX096793)
small RNA seq of Left atrial tissue. (heart)
SRR107296(GSM677703)
18-30nt fraction of small RNA. (cell line)
SRR342896(SRX096792)
small RNA seq of Right atrial tissue. (heart)
SRR330865(SRX091703)
tissue: skin psoriatic involveddisease state:. (skin)
SRR189784SRR107297(GSM677704)
18-30nt fraction of small RNA. (cell line)
SRR060984(GSM569188)
Human plasma cell [09-001]. (cell line)
GSM450603(GSM450603)
miRNA sequencing raw reads from post-mortem s. (brain)
SRR330861(SRX091699)
tissue: skin psoriatic involveddisease state:. (skin)
SRR330901(SRX091739)
tissue: skin psoriatic uninvolveddisease stat. (skin)
SRR040017(GSM532902)
G645T. (cervix)
GSM450608(GSM450608)
miRNA sequencing raw reads from post-mortem s. (brain)
SRR039622(GSM531985)
HCV(+) Adjacent Tissue Sample. (liver)
SRR330869(SRX091707)
tissue: skin psoriatic involveddisease state:. (skin)
GSM450605(GSM450605)
miRNA sequencing raw reads from post-mortem s. (brain)
SRR039619(GSM531982)
HBV(+) HCC Tissue Sample 1. (liver)
SRR039623(GSM531986)
HCV(+) HCC Tissue Sample. (liver)
SRR330895(SRX091733)
tissue: skin psoriatic uninvolveddisease stat. (skin)
SRR060981(GSM569185)
Human centroblast [09-001]. (cell line)
SRR330894(SRX091732)
tissue: skin psoriatic uninvolveddisease stat. (skin)
SRR330914(SRX091752)
tissue: normal skindisease state: normal. (skin)
SRR343334SRR330867(SRX091705)
tissue: skin psoriatic involveddisease state:. (skin)
SRR330889(SRX091727)
tissue: skin psoriatic uninvolveddisease stat. (skin)
SRR330921(SRX091759)
tissue: normal skindisease state: normal. (skin)
SRR033712(GSM497057)
Burkitt Lymphoma (BL510). (B cell)
SRR029054(GSM402329)
MCF7_smallRNAseq. (cell line)
TAX577588(Rovira)
total RNA. (breast)
SRR040010(GSM532895)
G529N. (cervix)
SRR553572(SRX182778)
source: Frontal Cortex. (Frontal Cortex)
SRR330892(SRX091730)
tissue: skin psoriatic uninvolveddisease stat. (skin)
SRR553575(SRX182781)
source: Kidney. (Kidney)
SRR040037(GSM532922)
G243T. (cervix)
SRR330922(SRX091760)
tissue: normal skindisease state: normal. (skin)
SRR330903(SRX091741)
tissue: skin psoriatic uninvolveddisease stat. (skin)
GSM450609(GSM450609)
miRNA sequencing raw reads from post-mortem s. (brain)
GSM1105753INPUT(GSM1105753)
small RNA sequencing data. (hela)
SRR037937(GSM510475)
293cand2. (cell line)
SRR330904(SRX091742)
tissue: normal skindisease state: normal. (skin)
SRR033721(GSM497066)
Ly3 cell line (Ly3). (B cell)
SRR330887(SRX091725)
tissue: skin psoriatic uninvolveddisease stat. (skin)
TAX577741(Rovira)
total RNA. (breast)
SRR330917(SRX091755)
tissue: normal skindisease state: normal. (skin)
SRR330899(SRX091737)
tissue: skin psoriatic uninvolveddisease stat. (skin)
SRR039635(GSM518472)
THP1_nuc_sRNAs. (cell line)
SRR330862(SRX091700)
tissue: skin psoriatic involveddisease state:. (skin)
SRR330868(SRX091706)
tissue: skin psoriatic involveddisease state:. (skin)
SRR553576(SRX182782)
source: Testis. (testes)
SRR191609(GSM715719)
194genomic small RNA (size selected RNA from . (breast)
SRR330870(SRX091708)
tissue: skin psoriatic involveddisease state:. (skin)
SRR330877(SRX091715)
tissue: skin psoriatic involveddisease state:. (skin)
GSM450602(GSM450602)
miRNA sequencing raw reads from post-mortem s. (brain)
GSM359181(GSM359181)
hela_phil_smrna_nuc. (hela)
GSM450599(GSM450599)
miRNA sequencing raw reads from post-mortem s. (brain)
SRR015360(GSM380325)
Plasma B cells (PC137). (B cell)
SRR342895(SRX096791)
small RNA seq of Left atrial tissue. (heart)
SRR060986(GSM569190)
Human memory B cell [09-001]. (cell line)
SRR029131(GSM416760)
MCF7. (cell line)
SRR038856(GSM458539)
D11. (cell line)
SRR040020(GSM532905)
G699N_2. (cervix)
SRR330878(SRX091716)
tissue: skin psoriatic involveddisease state:. (skin)
SRR191632(GSM715742)
78genomic small RNA (size selected RNA from t. (breast)
SRR330920(SRX091758)
tissue: normal skindisease state: normal. (skin)
SRR363674(GSM830251)
cell type: human foreskin fibroblasts (HFF)tr. (fibroblast)
SRR330916(SRX091754)
tissue: normal skindisease state: normal. (skin)
SRR330886(SRX091724)
tissue: skin psoriatic uninvolveddisease stat. (skin)
SRR553574(SRX182780)
source: Heart. (Heart)
SRR039624(GSM531987)
HBV(-) HCV(-) Adjacent Tissue Sample. (liver)
GSM450601(GSM450601)
miRNA sequencing raw reads from post-mortem s. (brain)
SRR191594(GSM715704)
70genomic small RNA (size selected RNA from t. (breast)
SRR343335SRR553573(SRX182779)
source: Cerebellum. (Cerebellum)
SRR189776(GSM714636)
cell line: HEK293clip variant: CLIPenzymatic . (cell line)
SRR343337SRR444046(SRX128894)
Sample 7cDNABarcode: AF-PP-342: ACG CTC TTC C. (skin)
SRR330919(SRX091757)
tissue: normal skindisease state: normal. (skin)
...................................................................................................................................................................................................................................................................................................................................................................................................................................................ACTTGGGCTGCCCCTTTCCAGT.................................................22126.0016.007.00----1.005.00--4.00-2.00----------1.00----1.001.00---------------------------1.00------1.00----1.00------------1.00--------------
...................................................................................................................................................................................................................................................................................................................................................................................................................................................ACTTGGGCTGCCCCTTTCCAG..................................................21116.0016.0015.00--------------------------------------------------1.00--------------------------------------------
...............................TGAAGACAAGACGGACAAGGATC....................................................................................................................................................................................................................................................................................................................................................................................................................................................................2316.002.00---6.00--------------------------------------------------------------------------------------------
..............................CTGAAGACAAGACGGACAAGGGTAT...................................................................................................................................................................................................................................................................................................................................................................................................................................................................2516.002.00-1.00-----1.00----------2.00------------------1.00---------------------------------1.00------------------------
..............................CTGAAGACAAGACGGACAA.........................................................................................................................................................................................................................................................................................................................................................................................................................................................................1915.005.00-------1.00--1.001.00-------------------1.00---1.00------------------------------------------------------------
...................................................................................................................................................................................................................................................................................................................................................................................................................................................ACTTGGGCTGCCCCTTCCAG...................................................204.000.004.00-----------------------------------------------------------------------------------------------
.............................TCTGAAGACAAGACGGACA..........................................................................................................................................................................................................................................................................................................................................................................................................................................................................1914.004.00-2.00------------1.00-------------1.00-------------------------------------------------------------------
..................AGAATCCCTTCTCTGAAGACA...................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2113.003.00--1.00---------------------------------2.00-----------------------------------------------------------
.....................ATCCCTTCTCTGAAGACAAGACGGA............................................................................................................................................................................................................................................................................................................................................................................................................................................................................2513.003.00-------------------3.00----------------------------------------------------------------------------
....................................ACAAGACGGACAAGGGTAT...................................................................................................................................................................................................................................................................................................................................................................................................................................................................193.000.00-----------------1.00-------2.00----------------------------------------------------------------------
.................................AAGACAAGACGGACAAGG.......................................................................................................................................................................................................................................................................................................................................................................................................................................................................1813.003.00-1.00--------1.00--------------------------------------------------1.00----------------------------------
................................GAAGACAAGACGGACAAG........................................................................................................................................................................................................................................................................................................................................................................................................................................................................1813.003.00-----------------1.00----------------------------------------------1.00-----------1.00-------------------
.................................AAGACAAGACGGACAAG........................................................................................................................................................................................................................................................................................................................................................................................................................................................................1713.003.00-1.00----------1.00-------1.00---------------------------------------------------------------------------
..............................CTGAAGACAAGACGGACAAGGGT.....................................................................................................................................................................................................................................................................................................................................................................................................................................................................2313.002.00-1.00------2.00---------------------------------------------------------------------------------------
..............................CTGAAGACAAGACGGACAAGGGTA....................................................................................................................................................................................................................................................................................................................................................................................................................................................................2413.002.00-----1.00------------1.00-----------------------1.00-----------------------------------------------------
.........................CTTCTCTGAAGACAAGACGGACA..........................................................................................................................................................................................................................................................................................................................................................................................................................................................................2312.002.00-1.00-------------------------------------1.00--------------------------------------------------------
................................GAAGACAAGACGGACAAGG.......................................................................................................................................................................................................................................................................................................................................................................................................................................................................1912.002.00-2.00----------------------------------------------------------------------------------------------
...................................................................................................................................................................................................................................................................................................................................................................................................................................................ACTTGGGCTGCCCCTTTCCA...................................................2012.002.002.00-----------------------------------------------------------------------------------------------
...............................TGAAGACAAGACGGACAAGG.......................................................................................................................................................................................................................................................................................................................................................................................................................................................................2012.002.00-2.00----------------------------------------------------------------------------------------------
..............................CTGAAGACAAGACGGACA..........................................................................................................................................................................................................................................................................................................................................................................................................................................................................1812.002.00-------------------------------1.00--------------1.00-------------------------------------------------
...........................TCTCTGAAGACAAGACGGACAAGGGTAT...................................................................................................................................................................................................................................................................................................................................................................................................................................................................282.000.00---------------------------------1.00-----------------------------------1.00--------------------------
..............................CTGAAGACAAGACGGACAAGG.......................................................................................................................................................................................................................................................................................................................................................................................................................................................................2112.002.00-----1.00--------------------------1.00---------------------------------------------------------------
..................................AGACAAGACGGACAAGG.......................................................................................................................................................................................................................................................................................................................................................................................................................................................................1712.002.00-----------------------1.00----------------------------------1.00-------------------------------------
.....................................................................................................................................................................................................ATAAGGACGGGTGGGGTGA..................................................................................................................................................................................................................................................................................................1912.002.00------------------------------2.00-----------------------------------------------------------------
.............................TCTGAAGACAAGACGGACAAGG.......................................................................................................................................................................................................................................................................................................................................................................................................................................................................2212.002.00-----------------------------------------------------1.00-------------------1.00----------------------
...........................................................................................................................................................................................................................................................................................................................................ATGTGCTGGGAGAGGCTGGGTGCAGGGA...................................................................................................................................................2812.002.00-------------2.00----------------------------------------------------------------------------------
........................CCTTCTCTGAAGACAAGACGGACAA.........................................................................................................................................................................................................................................................................................................................................................................................................................................................................2512.002.00---------------2.00--------------------------------------------------------------------------------
...............CCCAGAATCCCTTCTCTGAAGACAAG.................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2611.001.00------------------------------------------------------------------------1.00-----------------------
..................................................................................................................................................................................................................................................................................................................................................................AGGGACAGAGGGACGGC.......................................................................................................................................1711.001.00-----------------------------1.00------------------------------------------------------------------
.........................................................................................................................................................................................................................GAAGGGCTGCTCAGACAG...............................................................................................................................................................................................................................................................................1811.001.00-------------------------------------------------1.00----------------------------------------------
.....................................................................................................................................................................................................................................................................................................................................................................................................................................................................................CACGGGTGTCTGAAGGAGG..................1911.001.00--------------------------1.00---------------------------------------------------------------------
..............................CTGAAGACAAGACGGACAAG........................................................................................................................................................................................................................................................................................................................................................................................................................................................................2011.001.00-1.00----------------------------------------------------------------------------------------------
................................................................................................................................................................................................................................................AGGAGGAGCAGGAGGCGGGGGC....................................................................................................................................................................................................................................................221.000.00-----------------------------1.00------------------------------------------------------------------
..........................TTCTCTGAAGACAAGACGG.............................................................................................................................................................................................................................................................................................................................................................................................................................................................................1911.001.00------------------------------------------------------1.00-----------------------------------------
...........................................................................................................................................................................................................................................................................................................................................................TGGGTGCAGGGACAGAGGGA...........................................................................................................................................2011.001.00------------------------------------------------------------------------------------1.00-----------
....................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................GAGGCCCTGCTGAAATCGC...1911.001.00--------------1.00---------------------------------------------------------------------------------
......................................................................................................................................................................................................................................................................................................................................................................................................................................................................................ACGGGTGTCTGAAGGAGGCC................2011.001.00----------1.00-------------------------------------------------------------------------------------
...........................................................................................GGGGCCTGAGATGGTGCA.............................................................................................................................................................................................................................................................................................................................................................................................................181.000.00---------------------------1.00--------------------------------------------------------------------
..........................................................................................AGGGGCCTGAGATGGTGGG.............................................................................................................................................................................................................................................................................................................................................................................................................1911.001.00---------------------1.00--------------------------------------------------------------------------
................................GAAGACAAGACGGACA..........................................................................................................................................................................................................................................................................................................................................................................................................................................................................1611.001.00-----1.00------------------------------------------------------------------------------------------
..................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................AGGAGGCCCTGCTGACGCG.....191.000.00----1.00-------------------------------------------------------------------------------------------
....................................................................................................................TTCCTGGGCCTGCATTGCC...................................................................................................................................................................................................................................................................................................................................................................................191.000.00---------------------1.00--------------------------------------------------------------------------
................................................................................................................................................................................................................................................................................................................................................................................................................................................TTGACTTGGGCTGCCCCTTTCT....................................................2211.001.00------------------------------------------------1.00-----------------------------------------------
................................................................................................................................................................................................................................................................................................................................................................................................................................................TTGACTTGGGCTGCCCCTTTC.....................................................2111.001.00--------------------------------------------1.00---------------------------------------------------
....................................ACAAGACGGACAAGGGTC....................................................................................................................................................................................................................................................................................................................................................................................................................................................................181.000.00-----------------------------------------------------------1.00------------------------------------
.............TTCCCAGAATCCCTTCTCTGAAGACAAGACG..............................................................................................................................................................................................................................................................................................................................................................................................................................................................................3111.001.00----------------------------------------------------------------------1.00-------------------------
......................................................................................................................................................................................................................................................................................................................................................................................................................................................................................ACGGGTGTCTGAAGGAGGC.................1911.001.00----------1.00-------------------------------------------------------------------------------------
.............................TCTGAAGACAAGACGGAC...........................................................................................................................................................................................................................................................................................................................................................................................................................................................................1811.001.00--1.00---------------------------------------------------------------------------------------------
....................................................................................................................................................................................................................................................................................................................................................................................GAGAATGTGCCATGCTGATC..................................................................................................................201.000.00---------------------------------------------------------1.00--------------------------------------
....................................................................................................................................................................................................................................................................................................................................................................................................................TAAGGGGCCAGTCCAGTGAC..................................................................................2011.001.00-----------------------------------------------------------------------------1.00------------------
.....................................................................................................................................................................................................................................................................................................................................................AGAGGCTGGGTGCAGGGAAGT................................................................................................................................................211.000.00---------------1.00--------------------------------------------------------------------------------
..................................................................................................................................................................................................................................................................................................................................................GGGAGAGGCTGGGTGTGTG.....................................................................................................................................................191.000.00---------------------------------------------1.00--------------------------------------------------
.......................CCCTTCTCTGAAGACAAGACGGAC...........................................................................................................................................................................................................................................................................................................................................................................................................................................................................2411.001.00--------1.00---------------------------------------------------------------------------------------
...................GAATCCCTTCTCTGAAGACAAGACGG.............................................................................................................................................................................................................................................................................................................................................................................................................................................................................2611.001.00-1.00----------------------------------------------------------------------------------------------
.....................................................................................................................................................................................................................................................................................................................................................AGAGGCTGGGTGCAGGGATTT................................................................................................................................................211.000.00-------------------------------------------------------1.00----------------------------------------
...............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................TGAAGGAGGCCCTGCTGA.........1811.001.00---------------------------------1.00--------------------------------------------------------------
...............................TGAAGACAAGACGGACAAGGGTAT...................................................................................................................................................................................................................................................................................................................................................................................................................................................................2411.002.00--1.00---------------------------------------------------------------------------------------------
..........................................................................................................................................................................................................................................................................................................................................................CTGGGTGCAGGGACAGAGGGACGGC.......................................................................................................................................2511.001.00--------------1.00---------------------------------------------------------------------------------
.....................................................................................................................................................................................................................................................................................................................................................AGAGGCTGGGTGCAGGGGCCC................................................................................................................................................211.000.00----1.00-------------------------------------------------------------------------------------------
...................................................................................................................................................................................................................................................................................................................................................................................................................................................ACTTGGGCTGCCCCTTTCA....................................................191.000.00----------------------------------1.00-------------------------------------------------------------
.........................CTTCTCTGAAGACAAGACGGACAAG........................................................................................................................................................................................................................................................................................................................................................................................................................................................................2511.001.00-1.00----------------------------------------------------------------------------------------------
....................................ACAAGACGGACAAGGGT.....................................................................................................................................................................................................................................................................................................................................................................................................................................................................171.000.00------------1.00-----------------------------------------------------------------------------------
.............................TCTGAAGACAAGACGGACAAG........................................................................................................................................................................................................................................................................................................................................................................................................................................................................2111.001.00--1.00---------------------------------------------------------------------------------------------
...............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................TGAAGGAGGCCCTGCTGAAA.......2011.001.00-------------------------------------------1.00----------------------------------------------------
...............................TGAAGACAAGACGGACAAG........................................................................................................................................................................................................................................................................................................................................................................................................................................................................1911.001.00--------------------1.00---------------------------------------------------------------------------
.................CAGAATCCCTTCTCTGAAGACAAGAC...............................................................................................................................................................................................................................................................................................................................................................................................................................................................................2611.001.00-1.00----------------------------------------------------------------------------------------------
...............................TGAAGACAAGACGGACAAGGGTA....................................................................................................................................................................................................................................................................................................................................................................................................................................................................2311.002.00-------------------------------------1.00----------------------------------------------------------
...................................................................................................................................................................................................................................................................................................................................................................................................................................................ACTTGGGCTGCCCCTTTCCAGTAG...............................................2411.0016.00----------------------------------------------------------------------------------1.00-------------
.................CAGAATCCCTTCTCTGAAGACAAGACGGACA..........................................................................................................................................................................................................................................................................................................................................................................................................................................................................3111.001.00--1.00---------------------------------------------------------------------------------------------
...........................TCTCTGAAGACAAGACGGA............................................................................................................................................................................................................................................................................................................................................................................................................................................................................1911.001.00-------1.00----------------------------------------------------------------------------------------
..........................................CGGACAAGGTGAGGGGG...............................................................................................................................................................................................................................................................................................................................................................................................................................................................1711.001.00--------------------------------------------------------------------------1.00---------------------
..........................TTCTCTGAAGACAAGACGGAC...........................................................................................................................................................................................................................................................................................................................................................................................................................................................................2111.001.00---------------------------------------------------------------------------1.00--------------------
..............................CTGAAGACAAGACGGATA..........................................................................................................................................................................................................................................................................................................................................................................................................................................................................181.000.00---------------------------------------------------------------------------------------1.00--------
..................................................................................................................................................CATCTCTCAAACCATACCT.....................................................................................................................................................................................................................................................................................................................................................191.000.00-----------------------------------------1.00------------------------------------------------------
..........................TTCTCTGAAGACAAGACGGACAAGGGT.....................................................................................................................................................................................................................................................................................................................................................................................................................................................................271.000.00-------------------------------------------------------------------1.00----------------------------
..............................................................................................................................................................................................................................................................................................................................................................................................................................................................................TATGTCACACGGGTGTCTGAAG......................2211.001.00------------1.00-----------------------------------------------------------------------------------
.............................TCTGAAGACAAGACGGACAA.........................................................................................................................................................................................................................................................................................................................................................................................................................................................................2011.001.00------------------------------------------------------------1.00-----------------------------------
.................................AAGACAAGACGGACAAGGGT.....................................................................................................................................................................................................................................................................................................................................................................................................................................................................2011.003.00-----------------1.00------------------------------------------------------------------------------
...................................................TGAGGGGGTCTGGGGTCGTGT..................................................................................................................................................................................................................................................................................................................................................................................................................................................211.000.00-----------------------------------------------1.00------------------------------------------------
........................CCTTCTCTGAAGACAAGACGGAC...........................................................................................................................................................................................................................................................................................................................................................................................................................................................................2311.001.00--------------------------------------------------------------------------------1.00---------------
...........................................................................................................................................................................................................................................................................................................................................................TGGGTGCAGGGACAGAGGGACGGC.......................................................................................................................................2411.001.00--------------------------------------------------1.00---------------------------------------------
...............................................................................................................................................................................................................................................................................................................................................................................................................TGTGATAAGGGGCCAGTCCAGA.....................................................................................221.000.00----------------------1.00-------------------------------------------------------------------------
...........................................................................................................................................................................................................................................................................................................................................................................GGGACGGCTGAGAATGTG.............................................................................................................................1811.001.00-----------------------------------1.00------------------------------------------------------------
........................................................................................................GTGGGTCTCTGCTTCCTGGGCCTGCAT.......................................................................................................................................................................................................................................................................................................................................................................................2711.001.00--------------------------------1.00---------------------------------------------------------------
.................................AAGACAAGACGGACAAGGTGAGGG.................................................................................................................................................................................................................................................................................................................................................................................................................................................................2411.001.00--------------------------------------1.00---------------------------------------------------------
..................AGAATCCCTTCTCTGCGG......................................................................................................................................................................................................................................................................................................................................................................................................................................................................................181.000.00----1.00-------------------------------------------------------------------------------------------
.............................TCTGAAGACAAGACGGACAAGGG......................................................................................................................................................................................................................................................................................................................................................................................................................................................................2311.002.00------------------------------------------------------------------1.00-----------------------------
......................TCCCTTCTCTGAAGACAAGACGG.............................................................................................................................................................................................................................................................................................................................................................................................................................................................................2311.001.00----------------------------------------1.00-------------------------------------------------------
................................................................................................................................................................................................................................................................................................................................................................................................................................................TTGACTTGGGCTGCCCCTTTA.....................................................211.000.00-----------------------------------------------------------------1.00------------------------------
.............................................................................................................................................................................................................................................................................................GCAGCAACTCTGCCCCGGCTCTCTCAG..................................................................................................................................................................................................2711.001.00----------------------------------1.00-------------------------------------------------------------
............................................................................................................................................................................................CTAGTGAGAATAAGGACGGGTG........................................................................................................................................................................................................................................................................................................2211.001.00-------------------------------------------------------------------------------------1.00----------
...................................................................................................................................................................................................................................................................................................................................................................................................................................................ACTTGGGCTGCCCCTTTCCAGA.................................................2211.0016.00--------------------------------------------------------------1.00---------------------------------
............................CTCTGAAGACAAGACGG.............................................................................................................................................................................................................................................................................................................................................................................................................................................................................1711.001.00-------1.00----------------------------------------------------------------------------------------
...............................................................................................................................................................................................................................................................................................................................................GCTGGGAGAGGCTGGGTGCAGG.....................................................................................................................................................2211.001.00-------------1.00----------------------------------------------------------------------------------
............................................................................................................................................................................................................................................................................................................................................................................................................................CAGTCCAGTGACCACAGG............................................................................1811.001.00-----------------------------------------------------------------------------------1.00------------
......................TCCCTTCTCTGAAGACAAGACGGACAA.........................................................................................................................................................................................................................................................................................................................................................................................................................................................................2711.001.00-----------------------1.00------------------------------------------------------------------------
...................................................................................................................................................................................................................................................................................................................................................................................................................................................................................CACACGGGTGTCTGAAGGAG...................2011.001.00--1.00---------------------------------------------------------------------------------------------
..........................TTCTCTGAAGACAAGACGGACAAG........................................................................................................................................................................................................................................................................................................................................................................................................................................................................2411.001.00--------------------1.00---------------------------------------------------------------------------
.................CAGAATCCCTTCTCTGAAGACA...................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2211.001.00--1.00---------------------------------------------------------------------------------------------
..........................................................................................................................................................................................................................................................................................................................................................................AGGGACGGCTGAGAAGGCC.............................................................................................................................191.000.00----------------------------------------------------1.00-------------------------------------------
...............................................................................................................................................................................................................................................CAGGAGGAGCAGGAGGATA........................................................................................................................................................................................................................................................191.000.00--------------------------------------1.00---------------------------------------------------------
....................................................................................................................................................TCTCTCAAACCATGCCAAA...................................................................................................................................................................................................................................................................................................................................................191.000.00------------------------1.00-----------------------------------------------------------------------
..................................................................................................................................................................................................................................................................................................................................................GGGAGAGGCTGGGTGTTCC.....................................................................................................................................................191.000.00--------------------------1.00---------------------------------------------------------------------
...............................................................................................................................................................................................................................................CAGGAGGAGCAGGAGGAGCA.......................................................................................................................................................................................................................................................201.000.00-------------------------------------------------------------------------------1.00----------------
.............................TCTGAAGACAAGACGGACAAGGGTA....................................................................................................................................................................................................................................................................................................................................................................................................................................................................2511.002.00------------------------------------------------------------------------------1.00-----------------
..............................................................................................................CTCTGCTTCCTGGGCCTG..........................................................................................................................................................................................................................................................................................................................................................................................1820.500.50---------------------------------------0.50--------------------------------------------------------
...................................GACAAGACGGACAAGG.......................................................................................................................................................................................................................................................................................................................................................................................................................................................................1620.500.50---------------------0.50--------------------------------------------------------------------------
.............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................TCTGAAGGAGGCCCTG.............1620.500.50-----0.50------------------------------------------------------------------------------------------
.................CAGAATCCCTTCTCTGAAG......................................................................................................................................................................................................................................................................................................................................................................................................................................................................................1920.500.50-----------0.50------------------------------------------------------------------------------------
..................................AGACAAGACGGACAAG........................................................................................................................................................................................................................................................................................................................................................................................................................................................................1620.500.50-----0.50------------------------------------------------------------------------------------------
...................................................TGAGGGGGTCTGGGGT.......................................................................................................................................................................................................................................................................................................................................................................................................................................................1650.400.40--------------------------------------------------------------------------------------------0.200.20--
...................................................................................................................................................................................................................................................................................................ACTCTGCCCCGGCTC........................................................................................................................................................................................................1530.330.33------------------------------------------------------------------------------------------0.33-----
.................CAGAATCCCTTCTCTGA........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................1730.330.33-----------------------------------------------------------------------------------------0.33------
.....................................................................................................................................AAGGAACAGACTTCATCT...................................................................................................................................................................................................................................................................................................................................................................1830.330.33----------------------------------------------------------------------------------------0.33-------
..............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................CTGAAGGAGGCCCTGC............1670.290.29----------------------------------------0.14------------------------------------------------------0.14
.........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................GGTGTCTGAAGGAGGC.................1640.250.25-------------------------------------------------------------------------------------------0.25----
..............................................................................................................................................................................................................................................................................................................................................TGCTGGGAGAGGCTGGG...........................................................................................................................................................1760.170.17----------------------------------------------------------------------------------------------0.17-
.....................................................................................................................................AAGGAACAGACTTCAT.....................................................................................................................................................................................................................................................................................................................................................................1660.170.17----------------------0.17-------------------------------------------------------------------------
.....................................................................................................................................................................................AAGTGACCTAGTGAG......................................................................................................................................................................................................................................................................................................................1580.120.12------------0.12-----------------------------------------------------------------------------------
.....................................................................................................................................................................................................................................................................TCAGCAGGGCCGGTG......................................................................................................................................................................................................................................1590.110.11-------------0.11----------------------------------------------------------------------------------

Antisense strand
TCGACCAGGATCCTTCCCAGAATCCCTTCTCTGAAGACAAGACGGACAAGGTGAGGGGGTCTGGGGTCCTGGGACCGCTCCATGGGGCACAGGGGCCTGAGATGGTGGGTCTCTGCTTCCTGGGCCTGCATGGAAGGAACAGACTTCATCTCTCAAACCATGCTCTCTAAGAAGGCATCGGAAGTGACCTAGTGAGAATAAGGACGGGTGGGGTGAGGAAGGGCTGCTCAGACAGAGCCCAGGAGGAGCAGGAGGCGGCCATCAGCAGGGCCGGTGCATGGTGGTGCAGCAACTCTGCCCCGGCTCTCTCAGAACAGTCCTCACTGACCATATGTGCTGGGAGAGGCTGGGTGCAGGGACAGAGGGACGGCTGAGAATGTGCCATGCTGGCTTCCGCTGTGTGATAAGGGGCCAGTCCAGTGACCACAGGGCTTGACTTGGGCTGCCCCTTTCCAGGGTATTTATGTCACACGGGTGTCTGAAGGAGGCCCTGCTGAAATCGCTGG
....................................................................................................................................................................................................................................................................................................................................................................(((.((.(((.(((((.((.....(((..((((((((((((...)))....)))))))))...((....))..))).....)).)))))))))).)))....................................................
....................................................................................................................................................................................................................................................................................................................................................................357................................................................................................456................................................
SizePerfect hitTotal NormPerfect NormSRR189782SRR342899(SRX096795)
small RNA seq of Left atrial tissue. (heart)
SRR342901(SRX096797)
small RNA seq of Left atrial tissue. (heart)
SRR314796(SRX084354)
"Total RNA, fractionated (15-30nt)". (cell line)
SRR189779(GSM714639)
cell line: HEK293clip variant: PAR-CLIPenzyma. (cell line)
SRR342894(SRX096790)
small RNA seq of Right atrial tissue. (heart)
SRR387910(GSM843862)
antibody for ip: Ago2. (ago2 cell line)
RoviraIPAgo2(Rovira)
total RNA. (ago2 breast)
SRR330872(SRX091710)
tissue: skin psoriatic involveddisease state:. (skin)
SRR037942(GSM510480)
293DroshaTN_cand5. (cell line)
SRR039625(GSM531988)
HBV(-) HCV(-) HCC Tissue Sample. (liver)
SRR330864(SRX091702)
tissue: skin psoriatic involveddisease state:. (skin)
SRR330874(SRX091712)
tissue: skin psoriatic involveddisease state:. (skin)
SRR189780(GSM714640)
cell line: HEK293clip variant: PAR-CLIPenzyma. (cell line)
SRR330880(SRX091718)
tissue: skin psoriatic involveddisease state:. (skin)
SRR094129(GSM651905)
small RNA(18-35nt)small RNA deep sequencing o. (uterus)
SRR039612(GSM531975)
Human Normal Liver Tissue Sample 2. (liver)
SRR033715(GSM497060)
Mantle Cell Lymphoma (Mino122). (B cell)
TAX577742(Rovira)
total RNA. (breast)
SRR207115(GSM721077)
XRN1&2 knockdown. (XRN1/XRN2 cell line)
SRR342897(SRX096793)
small RNA seq of Left atrial tissue. (heart)
SRR107296(GSM677703)
18-30nt fraction of small RNA. (cell line)
SRR342896(SRX096792)
small RNA seq of Right atrial tissue. (heart)
SRR330865(SRX091703)
tissue: skin psoriatic involveddisease state:. (skin)
SRR189784SRR107297(GSM677704)
18-30nt fraction of small RNA. (cell line)
SRR060984(GSM569188)
Human plasma cell [09-001]. (cell line)
GSM450603(GSM450603)
miRNA sequencing raw reads from post-mortem s. (brain)
SRR330861(SRX091699)
tissue: skin psoriatic involveddisease state:. (skin)
SRR330901(SRX091739)
tissue: skin psoriatic uninvolveddisease stat. (skin)
SRR040017(GSM532902)
G645T. (cervix)
GSM450608(GSM450608)
miRNA sequencing raw reads from post-mortem s. (brain)
SRR039622(GSM531985)
HCV(+) Adjacent Tissue Sample. (liver)
SRR330869(SRX091707)
tissue: skin psoriatic involveddisease state:. (skin)
GSM450605(GSM450605)
miRNA sequencing raw reads from post-mortem s. (brain)
SRR039619(GSM531982)
HBV(+) HCC Tissue Sample 1. (liver)
SRR039623(GSM531986)
HCV(+) HCC Tissue Sample. (liver)
SRR330895(SRX091733)
tissue: skin psoriatic uninvolveddisease stat. (skin)
SRR060981(GSM569185)
Human centroblast [09-001]. (cell line)
SRR330894(SRX091732)
tissue: skin psoriatic uninvolveddisease stat. (skin)
SRR330914(SRX091752)
tissue: normal skindisease state: normal. (skin)
SRR343334SRR330867(SRX091705)
tissue: skin psoriatic involveddisease state:. (skin)
SRR330889(SRX091727)
tissue: skin psoriatic uninvolveddisease stat. (skin)
SRR330921(SRX091759)
tissue: normal skindisease state: normal. (skin)
SRR033712(GSM497057)
Burkitt Lymphoma (BL510). (B cell)
SRR029054(GSM402329)
MCF7_smallRNAseq. (cell line)
TAX577588(Rovira)
total RNA. (breast)
SRR040010(GSM532895)
G529N. (cervix)
SRR553572(SRX182778)
source: Frontal Cortex. (Frontal Cortex)
SRR330892(SRX091730)
tissue: skin psoriatic uninvolveddisease stat. (skin)
SRR553575(SRX182781)
source: Kidney. (Kidney)
SRR040037(GSM532922)
G243T. (cervix)
SRR330922(SRX091760)
tissue: normal skindisease state: normal. (skin)
SRR330903(SRX091741)
tissue: skin psoriatic uninvolveddisease stat. (skin)
GSM450609(GSM450609)
miRNA sequencing raw reads from post-mortem s. (brain)
GSM1105753INPUT(GSM1105753)
small RNA sequencing data. (hela)
SRR037937(GSM510475)
293cand2. (cell line)
SRR330904(SRX091742)
tissue: normal skindisease state: normal. (skin)
SRR033721(GSM497066)
Ly3 cell line (Ly3). (B cell)
SRR330887(SRX091725)
tissue: skin psoriatic uninvolveddisease stat. (skin)
TAX577741(Rovira)
total RNA. (breast)
SRR330917(SRX091755)
tissue: normal skindisease state: normal. (skin)
SRR330899(SRX091737)
tissue: skin psoriatic uninvolveddisease stat. (skin)
SRR039635(GSM518472)
THP1_nuc_sRNAs. (cell line)
SRR330862(SRX091700)
tissue: skin psoriatic involveddisease state:. (skin)
SRR330868(SRX091706)
tissue: skin psoriatic involveddisease state:. (skin)
SRR553576(SRX182782)
source: Testis. (testes)
SRR191609(GSM715719)
194genomic small RNA (size selected RNA from . (breast)
SRR330870(SRX091708)
tissue: skin psoriatic involveddisease state:. (skin)
SRR330877(SRX091715)
tissue: skin psoriatic involveddisease state:. (skin)
GSM450602(GSM450602)
miRNA sequencing raw reads from post-mortem s. (brain)
GSM359181(GSM359181)
hela_phil_smrna_nuc. (hela)
GSM450599(GSM450599)
miRNA sequencing raw reads from post-mortem s. (brain)
SRR015360(GSM380325)
Plasma B cells (PC137). (B cell)
SRR342895(SRX096791)
small RNA seq of Left atrial tissue. (heart)
SRR060986(GSM569190)
Human memory B cell [09-001]. (cell line)
SRR029131(GSM416760)
MCF7. (cell line)
SRR038856(GSM458539)
D11. (cell line)
SRR040020(GSM532905)
G699N_2. (cervix)
SRR330878(SRX091716)
tissue: skin psoriatic involveddisease state:. (skin)
SRR191632(GSM715742)
78genomic small RNA (size selected RNA from t. (breast)
SRR330920(SRX091758)
tissue: normal skindisease state: normal. (skin)
SRR363674(GSM830251)
cell type: human foreskin fibroblasts (HFF)tr. (fibroblast)
SRR330916(SRX091754)
tissue: normal skindisease state: normal. (skin)
SRR330886(SRX091724)
tissue: skin psoriatic uninvolveddisease stat. (skin)
SRR553574(SRX182780)
source: Heart. (Heart)
SRR039624(GSM531987)
HBV(-) HCV(-) Adjacent Tissue Sample. (liver)
GSM450601(GSM450601)
miRNA sequencing raw reads from post-mortem s. (brain)
SRR191594(GSM715704)
70genomic small RNA (size selected RNA from t. (breast)
SRR343335SRR553573(SRX182779)
source: Cerebellum. (Cerebellum)
SRR189776(GSM714636)
cell line: HEK293clip variant: CLIPenzymatic . (cell line)
SRR343337SRR444046(SRX128894)
Sample 7cDNABarcode: AF-PP-342: ACG CTC TTC C. (skin)
SRR330919(SRX091757)
tissue: normal skindisease state: normal. (skin)
.......................................................................................................................................................................................................................................................................................................................................................................................AGCGGAAGCCAGCATGGCACATT............................................................................................................ 2313.003.00----------------3.00-------------------------------------------------------------------------------
......................................................................................................................................................................................................................................................................................................CTGCCCCGGCTCTCTCTGG................................................................................................................................................................................................. 191.000.00----1.00-------------------------------------------------------------------------------------------
..........................................................................................................................................................................................................................................................................................................AGGACTGTTCTGAGAGAGCCGGG......................................................................................................................................................................................... 2311.001.00--------------------------------------------------------------------------------------1.00---------
...........................................................................................................................GCCTGCATGGAAGGAACTG............................................................................................................................................................................................................................................................................................................................................................................ 191.000.00------------------------1.00-----------------------------------------------------------------------
........................................................................................................................................................................................................................................................................................................................................................GGCTGGGTGCAGGGAATTG............................................................................................................................................... 191.000.00--------1.00---------------------------------------------------------------------------------------
........................................................................................................................................................................................................................................................................................................................................................................................ATGTGCCATGCTGGCTTCCGCTGTCCTC...................................................................................................... 281.000.00----1.00-------------------------------------------------------------------------------------------
............................................................................................................................................................................AGGCATCGGAAGTGAGCTG........................................................................................................................................................................................................................................................................................................................... 191.000.00----1.00-------------------------------------------------------------------------------------------