ID: uc002fvs.1_intron_4_0_chr17_3424334_r.3p
GENE: TRPV3(7)
chr17:3424284-3424533-


(1)
B-CELL
(10)
BRAIN
(6)
BREAST
(5)
CELL-LINE
(2)
CERVIX
(3)
LIVER
(1)
OTHER
(4)
SKIN
(1)
UTERUS
(1)
XRN.ip

Sense strand
GAAACAGAAGGCTTCCTGGAGGAGGCAGGATCCAGTGTTGAGCCTTGGAGCATCAGGAGGATTTGGCTGGGGGAAGGGAGAGTGGCCCAAGTGAAGAGACAGTTAGGGTGGGGGGTGGGAGAGGGTGGGAAGCAGGAAGATCAGGGTGCCGTGAATATGTGCTTGCACCTTACACTTGAATTATGTTTATTTCCTTATAGGTCATTTTGCATGATGTTCTGAAGTTCTTGTTTGTATATATCGTGTTTTT
.......................................................................................................((.(((....(((........((.....))......))).....))).)).................................................................................................
..................................................................................................99....................................................153...............................................................................................
SizePerfect hitTotal NormPerfect NormGSM450608(GSM450608)
miRNA sequencing raw reads from post-mortem s. (brain)
GSM450605(GSM450605)
miRNA sequencing raw reads from post-mortem s. (brain)
GSM450609(GSM450609)
miRNA sequencing raw reads from post-mortem s. (brain)
GSM450610(GSM450610)
miRNA sequencing raw reads from post-mortem s. (brain)
GSM450600(GSM450600)
miRNA sequencing raw reads from post-mortem s. (brain)
SRR330872(SRX091710)
tissue: skin psoriatic involveddisease state:. (skin)
GSM450606(GSM450606)
miRNA sequencing raw reads from post-mortem s. (brain)
SRR029054(GSM402329)
MCF7_smallRNAseq. (cell line)
GSM450601(GSM450601)
miRNA sequencing raw reads from post-mortem s. (brain)
GSM450603(GSM450603)
miRNA sequencing raw reads from post-mortem s. (brain)
TAX577742(Rovira)
total RNA. (breast)
SRR033712(GSM497057)
Burkitt Lymphoma (BL510). (B cell)
TAX577580(Rovira)
total RNA. (breast)
SRR039625(GSM531988)
HBV(-) HCV(-) HCC Tissue Sample. (liver)
SRR330913(SRX091751)
tissue: normal skindisease state: normal. (skin)
SRR094130(GSM651906)
small RNA(18-35nt)small RNA deep sequencing o. (uterus)
GSM450604(GSM450604)
miRNA sequencing raw reads from post-mortem s. (brain)
SRR553573(SRX182779)
source: Cerebellum. (Cerebellum)
SRR040036(GSM532921)
G243N. (cervix)
SRR189782TAX577740(Rovira)
total RNA. (breast)
SRR330901(SRX091739)
tissue: skin psoriatic uninvolveddisease stat. (skin)
TAX577579(Rovira)
total RNA. (breast)
SRR039613(GSM531976)
Human Normal Liver Tissue Sample 3. (liver)
GSM450602(GSM450602)
miRNA sequencing raw reads from post-mortem s. (brain)
TAX577744(Rovira)
total RNA. (breast)
SRR207116(GSM721078)
Nuclear RNA. (cell line)
SRR326280(GSM769510)
total cell content of unperturbed cells was s. (cell line)
SRR040035(GSM532920)
G001T. (cervix)
SRR039623(GSM531986)
HCV(+) HCC Tissue Sample. (liver)
TAX577743(Rovira)
total RNA. (breast)
SRR189781(GSM714641)
cell line: HEK293clip variant: PAR-CLIPenzyma. (cell line)
SRR207115(GSM721077)
XRN1&2 knockdown. (XRN1/XRN2 cell line)
SRR330866(SRX091704)
tissue: skin psoriatic involveddisease state:. (skin)
.......................................................................................................TAGGGTGGGGGGTGGTAGG................................................................................................................................1921.000.00-6.002.002.003.00-1.001.00-1.002.00-1.001.00------1.00-------------
.......................................................................................................TAGGGTGGGGGGTGGTAGA................................................................................................................................195.000.00--1.001.00-------1.00-------------1.00-1.00------
.......................................................................................................TAGGGTGGGGGGTGGTATG................................................................................................................................193.000.00--------1.00-------------1.00-1.00---------
.......................................................................................................TAGGGTGGGGGGTGGTAT.................................................................................................................................183.000.001.001.00-------------1.00------------------
.......................................................................................................TAGGGTGGGGGGTGGAA..................................................................................................................................173.000.001.00--1.00----1.00-------------------------
.......................................................................................................TAGGGTGGGGGGTGGTATA................................................................................................................................193.000.003.00---------------------------------
.......................................................................................................TAGGGTGGGGGGTGGTGTG................................................................................................................................192.000.001.00----------------------------1.00----
.......................................................................................................TAGGGTGGGGGGTGGTAA.................................................................................................................................182.000.00--1.00---1.00---------------------------
....................................................................................................................GGGAGAGGGTGGGAAGTTT...................................................................................................................192.000.00-----2.00----------------------------
.......................................................................................................TAGGGTGGGGGGTGGTTGG................................................................................................................................191.000.00---1.00------------------------------
...................................................................................................................................GCAGGAAGATCAGGGGCT.....................................................................................................181.000.00----------------------------1.00-----
.......................................................................................................TAGGGTGGGGGGTGGAAAA................................................................................................................................191.000.001.00---------------------------------
..........................................CCTTGGAGCATCAGGGGGG.............................................................................................................................................................................................191.000.00--------------1.00-------------------
.......................................................................................................TAGGGTGGGGGGTGGTAAA................................................................................................................................191.000.00---------1.00------------------------
..............................................................................................................GGGGGTGGGAGAGGGTGAGA........................................................................................................................201.000.00------------------1.00---------------
.........................................................................................................................................................................................TTTATTTCCTTATAGTTTC..............................................191.000.00-------------------------------1.00--
.......................................................................................................TAGGGTGGGGGGTGGTCG.................................................................................................................................181.000.00-------1.00--------------------------
.......................................................................................................TAGGGTGGGGGGTGGAAT.................................................................................................................................181.000.00----1.00-----------------------------
.............................................................................................................GGGGGGTGGGAGAGGGGATG.........................................................................................................................201.000.00------------------------------1.00---
...................................................................................................................................................................................ATTATGTTTATTTCCTTTT....................................................191.000.00---------------------1.00------------
.......................................................................................................TAGGGTGGGGGGTGGACC.................................................................................................................................181.000.00--1.00-------------------------------
.......................................................................................................TAGGGTGGGGGGTGGTACA................................................................................................................................191.000.00----------------1.00-----------------
..............................................................................................................GGGGGTGGGAGAGGGTGGGTGG......................................................................................................................221.000.00-----------------------1.00----------
.......................................................................................................TAGGGTGGGGGGTGGGAGGGTC.............................................................................................................................221.000.001.00---------------------------------
.......................................................................................................TAGGGTGGGGGGTGGACT.................................................................................................................................181.000.00--------------------------1.00-------
.......................................................................................................TAGGGTGGGGGGTGGTACT................................................................................................................................191.000.001.00---------------------------------
..................................GTGTTGAGCCTTGGAGCATCAGGAGGATT...........................................................................................................................................................................................2911.001.00-----------------1.00----------------
..............................................................TTGGCTGGGGGAAGGGAG..........................................................................................................................................................................1840.250.25--------------------------------0.25-

Antisense strand
GAAACAGAAGGCTTCCTGGAGGAGGCAGGATCCAGTGTTGAGCCTTGGAGCATCAGGAGGATTTGGCTGGGGGAAGGGAGAGTGGCCCAAGTGAAGAGACAGTTAGGGTGGGGGGTGGGAGAGGGTGGGAAGCAGGAAGATCAGGGTGCCGTGAATATGTGCTTGCACCTTACACTTGAATTATGTTTATTTCCTTATAGGTCATTTTGCATGATGTTCTGAAGTTCTTGTTTGTATATATCGTGTTTTT
.......................................................................................................((.(((....(((........((.....))......))).....))).)).................................................................................................
..................................................................................................99....................................................153...............................................................................................
SizePerfect hitTotal NormPerfect NormGSM450608(GSM450608)
miRNA sequencing raw reads from post-mortem s. (brain)
GSM450605(GSM450605)
miRNA sequencing raw reads from post-mortem s. (brain)
GSM450609(GSM450609)
miRNA sequencing raw reads from post-mortem s. (brain)
GSM450610(GSM450610)
miRNA sequencing raw reads from post-mortem s. (brain)
GSM450600(GSM450600)
miRNA sequencing raw reads from post-mortem s. (brain)
SRR330872(SRX091710)
tissue: skin psoriatic involveddisease state:. (skin)
GSM450606(GSM450606)
miRNA sequencing raw reads from post-mortem s. (brain)
SRR029054(GSM402329)
MCF7_smallRNAseq. (cell line)
GSM450601(GSM450601)
miRNA sequencing raw reads from post-mortem s. (brain)
GSM450603(GSM450603)
miRNA sequencing raw reads from post-mortem s. (brain)
TAX577742(Rovira)
total RNA. (breast)
SRR033712(GSM497057)
Burkitt Lymphoma (BL510). (B cell)
TAX577580(Rovira)
total RNA. (breast)
SRR039625(GSM531988)
HBV(-) HCV(-) HCC Tissue Sample. (liver)
SRR330913(SRX091751)
tissue: normal skindisease state: normal. (skin)
SRR094130(GSM651906)
small RNA(18-35nt)small RNA deep sequencing o. (uterus)
GSM450604(GSM450604)
miRNA sequencing raw reads from post-mortem s. (brain)
SRR553573(SRX182779)
source: Cerebellum. (Cerebellum)
SRR040036(GSM532921)
G243N. (cervix)
SRR189782TAX577740(Rovira)
total RNA. (breast)
SRR330901(SRX091739)
tissue: skin psoriatic uninvolveddisease stat. (skin)
TAX577579(Rovira)
total RNA. (breast)
SRR039613(GSM531976)
Human Normal Liver Tissue Sample 3. (liver)
GSM450602(GSM450602)
miRNA sequencing raw reads from post-mortem s. (brain)
TAX577744(Rovira)
total RNA. (breast)
SRR207116(GSM721078)
Nuclear RNA. (cell line)
SRR326280(GSM769510)
total cell content of unperturbed cells was s. (cell line)
SRR040035(GSM532920)
G001T. (cervix)
SRR039623(GSM531986)
HCV(+) HCC Tissue Sample. (liver)
TAX577743(Rovira)
total RNA. (breast)
SRR189781(GSM714641)
cell line: HEK293clip variant: PAR-CLIPenzyma. (cell line)
SRR207115(GSM721077)
XRN1&2 knockdown. (XRN1/XRN2 cell line)
SRR330866(SRX091704)
tissue: skin psoriatic involveddisease state:. (skin)
.AAACAGAAGGCTTCCTTTT...................................................................................................................................................................................................................................... 191.000.00-------------------1.00--------------
....................................................................................................CCCCCCACCCTAACT....................................................................................................................................... 1570.140.14---------------------------------0.14