ID: uc002fsg.2_intron_3_0_chr17_914104_r.3p
GENE: (18)
chr17:914054-914303-


(2)
AGO1.ip 		(4)
AGO2.ip 		(1)
AGO3.ip 		(6)
B-CELL 		(10)
BRAIN 		(17)
BREAST 		(31)
CELL-LINE 		(2)
CERVIX 		(1)
FIBROBLAST 		(8)
HEART 		(3)
HELA 		(1)
KIDNEY 		(2)
LIVER 		(2)
OTHER 		(1)
RRP40.ip 		(33)
SKIN 		(1)
TESTES 		(1)
UTERUS

Sense strand
CAGGCTATCTCTCCCTGTTCCCCCAACCCCGACCCACAGAGCCGAGTCACAGACACCTGTGGGCCCTCTCTACATCCTGCTCTTCCAGGGGAGACCAGAACCAGAGCTGGAGTGGGTGGGGGCTGTGTCAGGATGGGTCGGGGGTGGAACGGGGCTGCTGGCCCAGCTAAGGCTGCCTGACCTCGGCCCCACCCCTGCAGATAACAAGGACATCCTGCTGATGCTGAGTGACATGGACATCAACGCCATC
..........................................................................................................................................(((((((((....((((.....)))).((..(((........)))..)).))))))))).....................................................
....................................................................................................................................133................................................................200................................................
SizePerfect hitTotal NormPerfect NormSRR553572(SRX182778)
source: Frontal Cortex. (Frontal Cortex)		SRR387910(GSM843862)
antibody for ip: Ago2. (ago2 cell line)		SRR189786SRR342897(SRX096793)
small RNA seq of Left atrial tissue. (heart)		SRR342896(SRX096792)
small RNA seq of Right atrial tissue. (heart)		SRR095854(SRX039177)
"miRNA were isolated from FirstChoice Human B. (brain)		GSM1105748AGO1(GSM1105748)
small RNA sequencing data. (ago1 hela)		SRR189787SRR553573(SRX182779)
source: Cerebellum. (Cerebellum)		GSM450610(GSM450610)
miRNA sequencing raw reads from post-mortem s. (brain)		GSM450602(GSM450602)
miRNA sequencing raw reads from post-mortem s. (brain)		DRR001486(DRX001040)
"Hela long cytoplasmic cell fraction, LNA(+)". (hela)		SRR342900(SRX096796)
small RNA seq of Right atrial tissue. (heart)		TAX577453(Rovira)
total RNA. (breast)		SRR342898(SRX096794)
small RNA seq of Right atrial tissue. (heart)		SRR330916(SRX091754)
tissue: normal skindisease state: normal. (skin)		SRR387909(GSM843861)
specific-host: Homo sapienshost cell line: Su. (cell line)		SRR342899(SRX096795)
small RNA seq of Left atrial tissue. (heart)		SRR330890(SRX091728)
tissue: skin psoriatic uninvolveddisease stat. (skin)		SRR189782SRR029128(GSM416757)
H520. (cell line)		SRR330861(SRX091699)
tissue: skin psoriatic involveddisease state:. (skin)		SRR330877(SRX091715)
tissue: skin psoriatic involveddisease state:. (skin)		SRR342895(SRX096791)
small RNA seq of Left atrial tissue. (heart)		GSM450605(GSM450605)
miRNA sequencing raw reads from post-mortem s. (brain)		SRR330865(SRX091703)
tissue: skin psoriatic involveddisease state:. (skin)		GSM450606(GSM450606)
miRNA sequencing raw reads from post-mortem s. (brain)		TAX577580(Rovira)
total RNA. (breast)		SRR330873(SRX091711)
tissue: skin psoriatic involveddisease state:. (skin)		DRR000555(DRX000313)
"THP-1 whole cell RNA, no treatment". (cell line)		SRR330881(SRX091719)
tissue: skin psoriatic uninvolveddisease stat. (skin)		SRR330888(SRX091726)
tissue: skin psoriatic uninvolveddisease stat. (skin)		SRR330906(SRX091744)
tissue: normal skindisease state: normal. (skin)		GSM450601(GSM450601)
miRNA sequencing raw reads from post-mortem s. (brain)		SRR207113(GSM721075)
IP against AGO 1 & 2. (ago1/2 cell line)		DRR000557(DRX000315)
"THP-1 whole cell RNA, after 3 day treatment . (cell line)		SRR029129(GSM416758)
SW480. (cell line)		SRR330863(SRX091701)
tissue: skin psoriatic involveddisease state:. (skin)		SRR330891(SRX091729)
tissue: skin psoriatic uninvolveddisease stat. (skin)		DRR000558(DRX000316)
"THP-1 whole cell RNA, after 3 day treatment . (cell line)		SRR060982(GSM569186)
Human centrocyte [09-001]. (cell line)		SRR033725(GSM497070)
Unmutated CLL (CLLU626). (B cell)		SRR040008(GSM532893)
G727N. (cervix)		GSM450603(GSM450603)
miRNA sequencing raw reads from post-mortem s. (brain)		SRR038859(GSM458542)
MM386. (cell line)		SRR330901(SRX091739)
tissue: skin psoriatic uninvolveddisease stat. (skin)		SRR029126(GSM416755)
143B. (cell line)		SRR330868(SRX091706)
tissue: skin psoriatic involveddisease state:. (skin)		TAX577579(Rovira)
total RNA. (breast)		SRR330870(SRX091708)
tissue: skin psoriatic involveddisease state:. (skin)		GSM1105750AGO3(GSM1105750)
small RNA sequencing data. (ago3 hela)		GSM450600(GSM450600)
miRNA sequencing raw reads from post-mortem s. (brain)		SRR330893(SRX091731)
tissue: skin psoriatic uninvolveddisease stat. (skin)		SRR330878(SRX091716)
tissue: skin psoriatic involveddisease state:. (skin)		SRR033729(GSM497074)
splenic MZL (Splenic414). (B cell)		SRR326281(GSM769511)
"Dicer mRNA was knocked down using siDicer, c. (cell line)		DRR000559(DRX000317)
"THP-1 whole cell RNA, no treatment". (cell line)		RoviraIPAgo2(Rovira)
total RNA. (ago2 breast)		SRR040018(GSM532903)
G701N. (cervix)		SRR330883(SRX091721)
tissue: skin psoriatic uninvolveddisease stat. (skin)		DRR000561(DRX000319)
Isolation of RNA following immunoprecipitatio. (ago2 cell line)		SRR330879(SRX091717)
tissue: skin psoriatic involveddisease state:. (skin)		SRR107297(GSM677704)
18-30nt fraction of small RNA. (cell line)		SRR330857(SRX091695)
tissue: skin psoriatic involveddisease state:. (skin)		SRR033722(GSM497067)
KMS12 cell line (KMS12). (B cell)		SRR015363(GSM380328)
Germinal Center B cell (GC40). (B cell)		SRR039615(GSM531978)
Severe Chronic Hepatitis B Liver Tissue. (liver)		GSM450607(GSM450607)
miRNA sequencing raw reads from post-mortem s. (brain)		SRR330913(SRX091751)
tissue: normal skindisease state: normal. (skin)		SRR342894(SRX096790)
small RNA seq of Right atrial tissue. (heart)		SRR094130(GSM651906)
small RNA(18-35nt)small RNA deep sequencing o. (uterus)		SRR330892(SRX091730)
tissue: skin psoriatic uninvolveddisease stat. (skin)		SRR191590(GSM715700)
48genomic small RNA (size selected RNA from t. (breast)		SRR553575(SRX182781)
source: Kidney. (Kidney)		SRR207111(GSM721073)
Whole cell RNA. (cell line)		SRR330907(SRX091745)
tissue: normal skindisease state: normal. (skin)		SRR444065(SRX128913)
Sample 22cDNABarcode: AF-PP-335: ACG CTC TTC . (cell line)		SRR189783DRR000556(DRX000314)
"THP-1 whole cell RNA, after 3 day treatment . (cell line)		SRR342901(SRX096797)
small RNA seq of Left atrial tissue. (heart)		SRR330903(SRX091741)
tissue: skin psoriatic uninvolveddisease stat. (skin)		SRR326279(GSM769509)
cytoplasmic fraction was isolated using PARIS. (cell line)		GSM450609(GSM450609)
miRNA sequencing raw reads from post-mortem s. (brain)		SRR207118(GSM721080)
RRP40 knockdown. (RRP40 cell line)		SRR191408(GSM715518)
88genomic small RNA (size selected RNA from t. (breast)		SRR330904(SRX091742)
tissue: normal skindisease state: normal. (skin)		SRR191631(GSM715741)
75genomic small RNA (size selected RNA from t. (breast)		SRR189785SRR330875(SRX091713)
tissue: skin psoriatic involveddisease state:. (skin)		SRR330884(SRX091722)
tissue: skin psoriatic uninvolveddisease stat. (skin)		SRR189779(GSM714639)
cell line: HEK293clip variant: PAR-CLIPenzyma. (cell line)		SRR330917(SRX091755)
tissue: normal skindisease state: normal. (skin)		SRR191551(GSM715661)
32genomic small RNA (size selected RNA from t. (breast)		SRR189780(GSM714640)
cell line: HEK293clip variant: PAR-CLIPenzyma. (cell line)		TAX577590(Rovira)
total RNA. (breast)		SRR191498(GSM715608)
3genomic small RNA (size selected RNA from to. (breast)		SRR191439(GSM715549)
176genomic small RNA (size selected RNA from . (breast)		SRR191548(GSM715658)
101genomic small RNA (size selected RNA from . (breast)		SRR390723(GSM850202)
total small RNA. (cell line)		SRR033713(GSM497058)
Burkitt Lymphoma (BL115). (B cell)		SRR553576(SRX182782)
source: Testis. (testes)		SRR038860(GSM458543)
MM426. (cell line)		SRR191461(GSM715571)
35genomic small RNA (size selected RNA from t. (breast)		GSM956925Ago2(GSM956925)
"cell line: HEK293 cell linepassages: 15-20ip. (ago2 cell line)		SRR330860(SRX091698)
tissue: skin psoriatic involveddisease state:. (skin)		TAX577589(Rovira)
total RNA. (breast)		SRR039622(GSM531985)
HCV(+) Adjacent Tissue Sample. (liver)		SRR330915(SRX091753)
tissue: normal skindisease state: normal. (skin)		SRR330869(SRX091707)
tissue: skin psoriatic involveddisease state:. (skin)		SRR326282(GSM769512)
"Dicer mRNA was knocked down using siDicer, t. (cell line)		SRR038863(GSM458546)
MM603. (cell line)		TAX577738(Rovira)
total RNA. (breast)		SRR326280(GSM769510)
total cell content of unperturbed cells was s. (cell line)		GSM956925Paz8D5(GSM956925)
"cell line: HEK293 cell linepassages: 15-20ip. (cell line)		SRR363674(GSM830251)
cell type: human foreskin fibroblasts (HFF)tr. (fibroblast)		TAX577745(Rovira)
total RNA. (breast)		SRR039637(GSM518474)
THP1_total_sRNAs. (cell line)		SRR191550(GSM715660)
27genomic small RNA (size selected RNA from t. (breast)		SRR033711(GSM497056)
GCB DLBCL (GCB110). (B cell)		SRR330859(SRX091697)
tissue: skin psoriatic involveddisease state:. (skin)		SRR038852(GSM458535)
QF1160MB. (cell line)		SRR330880(SRX091718)
tissue: skin psoriatic involveddisease state:. (skin)		SRR444049(SRX128897)
Sample 9cDNABarcode: AF-PP-334: ACG CTC TTC C. (skin)
................................................................................................................................................................................CTGACCTCGGCCCCACCCCTGCAG..................................................24135.0035.003.005.00------2.002.002.00-2.00-----1.00-------1.00-1.00----2.00-1.00--------1.001.00-----1.00---1.00------------1.00----1.00-----1.00----1.00----------------1.00------1.001.00--1.00-------1.00--
................................................................................................................................................................................CTGACCTCGGCCCCACCCCTGCA...................................................23127.0027.003.00--1.002.00-5.00------2.001.001.00-1.002.00------------------1.00----------1.00-----2.00----------------1.00-----------------1.00------1.00--1.00----------------1.00------
................................................................................................................................................................................CTGACCTCGGCCCCACCCCTGC....................................................22119.0019.002.002.001.001.00-1.00--1.001.00--1.00---------------1.00---1.00---1.00-1.00----------1.001.00-------------------------1.00---------1.00-----1.00------------------------------
.................................................................................................................................................................................TGACCTCGGCCCCACCCCTGCAG..................................................23115.0015.001.001.00--1.00--2.00-----------1.00-1.001.00--2.00----1.00--------1.00---------1.00-1.00-----------1.00-----------------------------------------------------------
.................................................................................................................................................................................TGACCTCGGCCCCACCCCTGCAGT.................................................24112.0015.00-1.001.00-----------1.00------2.00-1.00-------------------------------------------1.00-1.00-------------------------1.00-----------1.00------1.00----1.00---
.................................................................................................................................................................................TGACCTCGGCCCCACCCCTGCAGA.................................................24110.0010.00-1.00-1.00-------------------------1.00-1.00---1.00------------------------1.00-1.00-------------------------1.00---------1.00-----1.00------------------
................................................................................................................................................................................CTGACCTCGGCCCCACCCCTGCAGT.................................................2518.0035.00---1.001.00-----1.00-1.00-1.00----------------1.00-----------2.00-------------------------------------------------------------------------------
................................................................................................................................................................................CTGACCTCGGCCCCACCCCTGCAT..................................................2416.0027.001.00-----------------------------------------------1.00------------------------------------------1.00-----1.00-------1.00-----1.00-----------
................................................................................................................................................................................CTGACCTCGGCCCCACCCCTGCAA..................................................2414.0027.00-------------2.00--------------------------------------------------1.00-------1.00--------------------------------------------------
.............................................................................................................................TGTCAGGATGGGTCGGGGGTGGAACGGGGCTGCTGGCCCAGCTAAGGCTGCCTGACCTCGGCCCCACCCCTGCAG..................................................7514.004.00-----------4.00---------------------------------------------------------------------------------------------------------------
...............................................................................................................................................................................CCTGACCTCGGCCCCACCCCTGC....................................................2314.004.00-1.00---3.00---------------------------------------------------------------------------------------------------------------------
.........................................................................................................................................TCGGGGGTGGAACGGGGCTGCTGGC........................................................................................2514.004.00--------------------------------------------1.00-----1.00------------------------1.00------------------------------------------1.00----
.................................................................................................................................................................................TGACCTCGGCCCCACCCCTGC....................................................2114.004.001.001.00------------------------------1.00--------------------------------------------------1.00---------------------------------------
.........................................................................................................................................TCGGGGGTGGAACGGGGCTGCTGG.........................................................................................2413.003.00----1.00---------------------------------1.00--------------------------1.00---------------------------------------------------------
................................................................................................................................................................................CTGACCTCGGCCCCACCCCTGCAAA.................................................2513.0027.00--------------------3.00------------------------------------------------------------------------------------------------------
.................................................................................................................................................................................TGACCTCGGCCCCACCCCTGCA...................................................2213.003.00-1.00---------------------------------------------------------------------------------------------------------------1.00---1.00-----
...........................................................................................................................................................................................................................GATGCTGAGTGACATGGACA...........2013.003.003.00--------------------------------------------------------------------------------------------------------------------------
..............................................................................................................................................................................................................AGGACATCCTGCTGATGCTGAGTGACATGGACA...........3312.002.002.00--------------------------------------------------------------------------------------------------------------------------
................................................................................................................................................................................CTGACCTCGGCCCCACCCCTGCTT..................................................2412.0019.00--------------1.00----------------------------------------------1.00-------------------------------------------------------------
................................................................................................................................................................................CTGACCTCGGCCCCACCCCTGT....................................................222.000.00------------------------------------1.00------------------1.00-------------------------------------------------------------------
.................................................................................................................................................................................................................................GAGTGACATGGACATCAACGC....2112.002.00-----------------1.00-----------------------------1.00---------------------------------------------------------------------------
........................................................................................................................................................................................................................GCTGATGCTGAGTGACATGGACA...........2312.002.00---------2.00-----------------------------------------------------------------------------------------------------------------
..........................................................................................................................................CGGGGGTGGAACGGGGCTGCTGGC........................................................................................2412.002.00-----------------------------------------------------1.00--1.00------------------------------------------------------------------
................................................................................................................................................................................CTGACCTCGGCCCCACCCCTGCT...................................................2312.0019.001.00----------------------------------------------------------1.00---------------------------------------------------------------
.............................................................................................................................................................................................................AAGGACATCCTGCTGAT............................1712.002.00--------2.00------------------------------------------------------------------------------------------------------------------
................................................................................................................................................................................CTGACCTCGGCCCCACCCCTGCAGA.................................................2512.002.00-2.00-------------------------------------------------------------------------------------------------------------------------
...................................................................................................................................................AACGGGGCTGCTGGCCCAGCTA.................................................................................2212.002.00----------------------------------------------2.00----------------------------------------------------------------------------
...........................................................................................................................................GGGGGTGGAACGGGGCTGCTGGC........................................................................................2312.002.00-----------------------------------------2.00---------------------------------------------------------------------------------
..............................................................................................................................................................................................................AGGACATCCTGCTGATGCTGAGTGACATGG..............3012.002.002.00--------------------------------------------------------------------------------------------------------------------------
.........................................................................................................................................TCGGGGGTGGAACGGGGCTGCTGGCACT.....................................................................................2812.004.00-2.00-------------------------------------------------------------------------------------------------------------------------
.........................................................................................................................................TCGGGGGTGGAACGGGGCTGCTGA.........................................................................................2411.001.00---------------1.00-----------------------------------------------------------------------------------------------------------
.........................................................................................................................................TCGGGGGTGGAACGGGGCTG.............................................................................................2011.001.00----------------------------------------1.00----------------------------------------------------------------------------------
.........................................................................................................................................TCGGGGGTGGAACGGGT................................................................................................171.000.00------------------------1.00--------------------------------------------------------------------------------------------------
.................................................................................................................................................................................TGACCTCGGCCCCACCCCTG.....................................................2011.001.00-------------------1.00-------------------------------------------------------------------------------------------------------
.........................................................................................................................................TCGGGGGTGGAACGGGGCTGCTTCT........................................................................................251.000.00--1.00------------------------------------------------------------------------------------------------------------------------
........................................................................................................................................................................................................................GCTGATGCTGAGTGACATGGACATCAAC......2811.001.00---1.00-----------------------------------------------------------------------------------------------------------------------
...........................................................................................................................................................................................................................GATGCTGAGTGACATGGACATCAACGCC...2811.001.00-----------------1.00---------------------------------------------------------------------------------------------------------
................................................................................................................................................................................CTGACCTCGGCCCCACCCCTGCAGTTT...............................................2711.0035.00---1.00-----------------------------------------------------------------------------------------------------------------------
.........................................................................................................................................................................................................................CTGATGCTGAGTGACATGGACATC.........2411.001.001.00--------------------------------------------------------------------------------------------------------------------------
.................................................................................................................................................................................TGACCTCGGCCCCACCCCTGCGGA.................................................2411.004.00---------------------------------------------------------------------------------1.00-----------------------------------------
..........................................................................................................................................................................................................................TGATGCTGAGTGACATGGACA...........2111.001.00-----------------------------------------------1.00---------------------------------------------------------------------------
.................................................................................................................................................................................TGACCTCGGCCCCACCCCTGCAAT.................................................2411.003.00-------------------------------------------------------------------------------------------------------------------1.00-------
..................................................................................................................................GGATGGGTCGGGGGTCGG......................................................................................................181.000.00---------------------------------------------------------1.00-----------------------------------------------------------------
.........................................................................................................................................................................................................TAACAAGGACATCCTGCTGATGCTGA.......................2611.001.00----------------------------------------------------------------------------------------------------1.00----------------------
.......................................................................................................................................................................................................................TGCTGATGCTGAGTGTCCA................191.000.00----------1.00----------------------------------------------------------------------------------------------------------------
......................................................................................................................................GGGTCGGGGGTGGAACTCTG................................................................................................201.000.00-----------------------------------------------------1.00---------------------------------------------------------------------
................................................................................................................................................................................CTGACCTCGGCCCCACCCCTGCAGC.................................................2511.0035.00--1.00------------------------------------------------------------------------------------------------------------------------
.........................................................................................................................................TCGGGGGTGGAACGGGGCTGCTGGTT.......................................................................................2611.003.00----------------------------------------------------1.00----------------------------------------------------------------------
..................................................................................TTCCAGGGGAGACCAGAACCAGAGCT..............................................................................................................................................2611.001.00-------------------------------------------------------------------------------------1.00-------------------------------------
................................................................................................................................................................................CTGACCTCGGCCCCACCCCCGC....................................................221.000.00-------1.00-------------------------------------------------------------------------------------------------------------------
...............................................................................................................................................................................CCTGACCTCGGCCCCACCCCTGCAGA.................................................2611.001.00----------------------1.00----------------------------------------------------------------------------------------------------
.................................................................................................................................................................................TGACCTCGGCCCCACCCCTGCT...................................................2211.004.00-1.00-------------------------------------------------------------------------------------------------------------------------
..........CTCCCTGTTCCCCCAACCCCGACCCACAG...................................................................................................................................................................................................................2911.001.00-----------------------1.00---------------------------------------------------------------------------------------------------
................................................................................................................................................................................CTGACCTCGGCCCCACCCCTGCAGTTCT..............................................2811.0035.00--1.00------------------------------------------------------------------------------------------------------------------------
.................................................................................................................................................................................TGACCTCGGCCCCACCCCTGCAGTA................................................2511.0015.00-1.00-------------------------------------------------------------------------------------------------------------------------
................................................................................................................................................................................CTGACCTCGGCCCCACCCCTGCAATCT...............................................2711.0027.00-------1.00-------------------------------------------------------------------------------------------------------------------
.................................................................................................................................................................................TGACCTCGGCCCCACCCCTGCAGC.................................................2411.0015.00----------------------------------------1.00----------------------------------------------------------------------------------
...................................................................................................ACCAGAGCTGGAGTGGGTG....................................................................................................................................1911.001.00------------------------------------------1.00--------------------------------------------------------------------------------
........................................................................................................................................................................................................................GCTGATGCTGAGTGACATGGA.............2111.001.001.00--------------------------------------------------------------------------------------------------------------------------
.................................................................................................................................................................................TGACCTCGGCCCCACCCCTGCAGTCT...............................................2611.0015.00--1.00------------------------------------------------------------------------------------------------------------------------
..............................................................................................................................................................................................................AGGACATCCTGCTGATGCTGA.......................2111.001.00--------------------------1.00------------------------------------------------------------------------------------------------
............................................................................................................................................................................................................CAAGGACATCCTGCTGATGCTGAGTGACA.................2911.001.001.00--------------------------------------------------------------------------------------------------------------------------
.........................................................................................................................................................................AGGCTGCCTGACCTCGGCCCCACCCCTGCAG..................................................3111.001.00------------------------------------------------------------------------------1.00--------------------------------------------
.................................................................................................................................................................................TGACCTCGGCCCCACCCC.......................................................1811.001.00--------------------------------------------------------------------------1.00------------------------------------------------
..............................................................................................................................................................................................................AGGACATCCTGCTGATGCTGAGTGACATGGA.............3111.001.001.00--------------------------------------------------------------------------------------------------------------------------
..............................................................................................................................................................................................................................GCTGAGTGACATGGACATCAACGC....2411.001.001.00--------------------------------------------------------------------------------------------------------------------------
.................................................................................................................................................................................TGACCTCGGCCCCACCCCTGCAGAA................................................2511.0010.00-1.00-------------------------------------------------------------------------------------------------------------------------
..................................................................................................................................................................................................................................AGTGACATGGACATCAACG.....1911.001.00-----------------------1.00---------------------------------------------------------------------------------------------------
................................................................................................................................................................................CTGACCTCGGCCCCACCCCTGCAGAA................................................2611.002.00----------1.00----------------------------------------------------------------------------------------------------------------
..............................................................................................................................................................................................................AGGACATCCTGCTGATGCTGAGTGACATGGAC............3211.001.001.00--------------------------------------------------------------------------------------------------------------------------
..............................................................................................................................GTCAGGATGGGTCGGGCCTG........................................................................................................201.000.00--------------------------------------------------------------------------------1.00------------------------------------------
...............................................................................................CAGAACCAGAGCTGGATTA........................................................................................................................................191.000.00------------------------------------------------------------------------------------------------------1.00--------------------
................................................................................................................................................................................CTGACCTCGGCCCCACCCCTGCAAC.................................................2511.0027.00--1.00------------------------------------------------------------------------------------------------------------------------
.............................................................................................................GAGTGGGTGGGGGCTGTAGGG........................................................................................................................211.000.00---------------------------------------------1.00-----------------------------------------------------------------------------
...........................................................................................................................................................................................................................GATGCTGAGTGACATGGACATC.........2211.001.00------------------------1.00--------------------------------------------------------------------------------------------------
........................................................................................................................................GTCGGGGGTGGAACGGGGCTGGTGG.........................................................................................251.000.00----------------------------------1.00----------------------------------------------------------------------------------------
..........................................................................................................................................................................................................................TGATGCTGAGTGACATG...............1711.001.00----------------------------------------------------------------------1.00----------------------------------------------------
................................................................................................................................................................................CTGACCTCGGCCCCACCCCTGCATT.................................................2511.0027.00-------------------------------------1.00-------------------------------------------------------------------------------------
.................................................................................................................................................................................TGACCTCGGCCCCACCCCTGCAGTACT..............................................2711.0015.00--1.00------------------------------------------------------------------------------------------------------------------------
..........................................................................................................CTGGAGTGGGTGGGGTGT..............................................................................................................................181.000.00----------------------------------------------------------1.00----------------------------------------------------------------
................................................................................................................................................................................CTGACCTCGGCCCCACCCCT......................................................2011.001.00----1.00----------------------------------------------------------------------------------------------------------------------
.................................................................................................................................................................................TGACCTCGGCCCCACCCCTGCAGTT................................................2511.0015.00----------------------------------------------------1.00----------------------------------------------------------------------
.............................................................................................................................................................................................................AAGGACATCCTGCTGATGCTGAGTGACATGGAC............3311.001.001.00--------------------------------------------------------------------------------------------------------------------------
.......................................................................................................................................GGTCGGGGGTGGAACGGGGCTGC............................................................................................2311.001.00-------------------------------------------------------------------------------------------------------1.00-------------------
...............................................................................................................................................................................CCTGACCTCGGCCCCACCCCAAT....................................................231.000.00----------------------------------------------------------------------------------------------------------1.00----------------
...............................................................................................................................................................................CCTGACCTCGGCCCCACCCCTGCAT..................................................251.000.00-----1.00---------------------------------------------------------------------------------------------------------------------
................................................................................................................................................................................CTGACCTCGGCCCCACCCCTGAGT..................................................241.000.00------------------------------1.00--------------------------------------------------------------------------------------------
................................................................................................................................................................................CTGACCTCGGCCCCACCCCTGCAGAAT...............................................2711.002.00-1.00-------------------------------------------------------------------------------------------------------------------------
.....................................................................................................................................................................................CTCGGCCCCACCCCTGCAGA.................................................2011.001.001.00--------------------------------------------------------------------------------------------------------------------------
........................................................................................................................................GTCGGGGGTGGAACGGGGCTGCTTAT........................................................................................261.000.00---------------------------------------1.00-----------------------------------------------------------------------------------
................................................................................................................................................................................CTGACCTCGGCCCCACCCCTGCAGCT................................................2611.0035.00--1.00------------------------------------------------------------------------------------------------------------------------
................................................................................................................................................................................CTGACCTCGGCCCCACCCCTGCAGGTT...............................................2711.0035.00-------1.00-------------------------------------------------------------------------------------------------------------------
........................................................................................................................................GTCGGGGGTGGAACGGGGCTGCTGG.........................................................................................2511.001.00----------------------------------1.00----------------------------------------------------------------------------------------
................................................................................................................................................................................CTGACCTCGGCCCCACCCCTGCTTT.................................................2511.0019.00---------------1.00-----------------------------------------------------------------------------------------------------------
.........................................................................................................................................TCGGGGGTGGAACGGGGCTGCTGT.........................................................................................2411.001.00--------------------------------------------------------------------------------------------------------------1.00------------
............................................................................................................................GTGTCAGGATGGGTCTAAG...........................................................................................................191.000.00---------------------------------------------------------------------------------------1.00-----------------------------------
........................................................................................................................GGCTGTGTCAGGATGGGTCGGGGGTGGAACGG..................................................................................................3211.001.001.00--------------------------------------------------------------------------------------------------------------------------
.........................................................................................................................................TCGGGGGTGGAACGGGGCTGCTG..........................................................................................2311.001.00------------------------------------------------------------------1.00--------------------------------------------------------
.....................................................................................................................................................................................................................CCTGCTGATGCTGAGTGACATGGA.............2411.001.001.00--------------------------------------------------------------------------------------------------------------------------
..............................................................................................................................................................................................................AGGACATCCTGCTGATG...........................1720.500.500.50--------------------------------------------------------------------------------------------------------------------------
.............................CGACCCACAGAGCCGA.............................................................................................................................................................................................................1620.500.50--------------------------------------------------------0.50------------------------------------------------------------------
......................................................................................................................................................................................................................CTGCTGATGCTGAGTG....................1640.250.25-----0.25---------------------------------------------------------------------------------------------------------------------
................................................................................................................TGGGTGGGGGCTGTGT..........................................................................................................................1680.120.12--------------------------------------------------------------------------------------------------------------------------0.12

Antisense strand
CAGGCTATCTCTCCCTGTTCCCCCAACCCCGACCCACAGAGCCGAGTCACAGACACCTGTGGGCCCTCTCTACATCCTGCTCTTCCAGGGGAGACCAGAACCAGAGCTGGAGTGGGTGGGGGCTGTGTCAGGATGGGTCGGGGGTGGAACGGGGCTGCTGGCCCAGCTAAGGCTGCCTGACCTCGGCCCCACCCCTGCAGATAACAAGGACATCCTGCTGATGCTGAGTGACATGGACATCAACGCCATC
..........................................................................................................................................(((((((((....((((.....)))).((..(((........)))..)).))))))))).....................................................
....................................................................................................................................133................................................................200................................................
SizePerfect hitTotal NormPerfect NormSRR553572(SRX182778)
source: Frontal Cortex. (Frontal Cortex)		SRR387910(GSM843862)
antibody for ip: Ago2. (ago2 cell line)		SRR189786SRR342897(SRX096793)
small RNA seq of Left atrial tissue. (heart)		SRR342896(SRX096792)
small RNA seq of Right atrial tissue. (heart)		SRR095854(SRX039177)
"miRNA were isolated from FirstChoice Human B. (brain)		GSM1105748AGO1(GSM1105748)
small RNA sequencing data. (ago1 hela)		SRR189787SRR553573(SRX182779)
source: Cerebellum. (Cerebellum)		GSM450610(GSM450610)
miRNA sequencing raw reads from post-mortem s. (brain)		GSM450602(GSM450602)
miRNA sequencing raw reads from post-mortem s. (brain)		DRR001486(DRX001040)
"Hela long cytoplasmic cell fraction, LNA(+)". (hela)		SRR342900(SRX096796)
small RNA seq of Right atrial tissue. (heart)		TAX577453(Rovira)
total RNA. (breast)		SRR342898(SRX096794)
small RNA seq of Right atrial tissue. (heart)		SRR330916(SRX091754)
tissue: normal skindisease state: normal. (skin)		SRR387909(GSM843861)
specific-host: Homo sapienshost cell line: Su. (cell line)		SRR342899(SRX096795)
small RNA seq of Left atrial tissue. (heart)		SRR330890(SRX091728)
tissue: skin psoriatic uninvolveddisease stat. (skin)		SRR189782SRR029128(GSM416757)
H520. (cell line)		SRR330861(SRX091699)
tissue: skin psoriatic involveddisease state:. (skin)		SRR330877(SRX091715)
tissue: skin psoriatic involveddisease state:. (skin)		SRR342895(SRX096791)
small RNA seq of Left atrial tissue. (heart)		GSM450605(GSM450605)
miRNA sequencing raw reads from post-mortem s. (brain)		SRR330865(SRX091703)
tissue: skin psoriatic involveddisease state:. (skin)		GSM450606(GSM450606)
miRNA sequencing raw reads from post-mortem s. (brain)		TAX577580(Rovira)
total RNA. (breast)		SRR330873(SRX091711)
tissue: skin psoriatic involveddisease state:. (skin)		DRR000555(DRX000313)
"THP-1 whole cell RNA, no treatment". (cell line)		SRR330881(SRX091719)
tissue: skin psoriatic uninvolveddisease stat. (skin)		SRR330888(SRX091726)
tissue: skin psoriatic uninvolveddisease stat. (skin)		SRR330906(SRX091744)
tissue: normal skindisease state: normal. (skin)		GSM450601(GSM450601)
miRNA sequencing raw reads from post-mortem s. (brain)		SRR207113(GSM721075)
IP against AGO 1 & 2. (ago1/2 cell line)		DRR000557(DRX000315)
"THP-1 whole cell RNA, after 3 day treatment . (cell line)		SRR029129(GSM416758)
SW480. (cell line)		SRR330863(SRX091701)
tissue: skin psoriatic involveddisease state:. (skin)		SRR330891(SRX091729)
tissue: skin psoriatic uninvolveddisease stat. (skin)		DRR000558(DRX000316)
"THP-1 whole cell RNA, after 3 day treatment . (cell line)		SRR060982(GSM569186)
Human centrocyte [09-001]. (cell line)		SRR033725(GSM497070)
Unmutated CLL (CLLU626). (B cell)		SRR040008(GSM532893)
G727N. (cervix)		GSM450603(GSM450603)
miRNA sequencing raw reads from post-mortem s. (brain)		SRR038859(GSM458542)
MM386. (cell line)		SRR330901(SRX091739)
tissue: skin psoriatic uninvolveddisease stat. (skin)		SRR029126(GSM416755)
143B. (cell line)		SRR330868(SRX091706)
tissue: skin psoriatic involveddisease state:. (skin)		TAX577579(Rovira)
total RNA. (breast)		SRR330870(SRX091708)
tissue: skin psoriatic involveddisease state:. (skin)		GSM1105750AGO3(GSM1105750)
small RNA sequencing data. (ago3 hela)		GSM450600(GSM450600)
miRNA sequencing raw reads from post-mortem s. (brain)		SRR330893(SRX091731)
tissue: skin psoriatic uninvolveddisease stat. (skin)		SRR330878(SRX091716)
tissue: skin psoriatic involveddisease state:. (skin)		SRR033729(GSM497074)
splenic MZL (Splenic414). (B cell)		SRR326281(GSM769511)
"Dicer mRNA was knocked down using siDicer, c. (cell line)		DRR000559(DRX000317)
"THP-1 whole cell RNA, no treatment". (cell line)		RoviraIPAgo2(Rovira)
total RNA. (ago2 breast)		SRR040018(GSM532903)
G701N. (cervix)		SRR330883(SRX091721)
tissue: skin psoriatic uninvolveddisease stat. (skin)		DRR000561(DRX000319)
Isolation of RNA following immunoprecipitatio. (ago2 cell line)		SRR330879(SRX091717)
tissue: skin psoriatic involveddisease state:. (skin)		SRR107297(GSM677704)
18-30nt fraction of small RNA. (cell line)		SRR330857(SRX091695)
tissue: skin psoriatic involveddisease state:. (skin)		SRR033722(GSM497067)
KMS12 cell line (KMS12). (B cell)		SRR015363(GSM380328)
Germinal Center B cell (GC40). (B cell)		SRR039615(GSM531978)
Severe Chronic Hepatitis B Liver Tissue. (liver)		GSM450607(GSM450607)
miRNA sequencing raw reads from post-mortem s. (brain)		SRR330913(SRX091751)
tissue: normal skindisease state: normal. (skin)		SRR342894(SRX096790)
small RNA seq of Right atrial tissue. (heart)		SRR094130(GSM651906)
small RNA(18-35nt)small RNA deep sequencing o. (uterus)		SRR330892(SRX091730)
tissue: skin psoriatic uninvolveddisease stat. (skin)		SRR191590(GSM715700)
48genomic small RNA (size selected RNA from t. (breast)		SRR553575(SRX182781)
source: Kidney. (Kidney)		SRR207111(GSM721073)
Whole cell RNA. (cell line)		SRR330907(SRX091745)
tissue: normal skindisease state: normal. (skin)		SRR444065(SRX128913)
Sample 22cDNABarcode: AF-PP-335: ACG CTC TTC . (cell line)		SRR189783DRR000556(DRX000314)
"THP-1 whole cell RNA, after 3 day treatment . (cell line)		SRR342901(SRX096797)
small RNA seq of Left atrial tissue. (heart)		SRR330903(SRX091741)
tissue: skin psoriatic uninvolveddisease stat. (skin)		SRR326279(GSM769509)
cytoplasmic fraction was isolated using PARIS. (cell line)		GSM450609(GSM450609)
miRNA sequencing raw reads from post-mortem s. (brain)		SRR207118(GSM721080)
RRP40 knockdown. (RRP40 cell line)		SRR191408(GSM715518)
88genomic small RNA (size selected RNA from t. (breast)		SRR330904(SRX091742)
tissue: normal skindisease state: normal. (skin)		SRR191631(GSM715741)
75genomic small RNA (size selected RNA from t. (breast)		SRR189785SRR330875(SRX091713)
tissue: skin psoriatic involveddisease state:. (skin)		SRR330884(SRX091722)
tissue: skin psoriatic uninvolveddisease stat. (skin)		SRR189779(GSM714639)
cell line: HEK293clip variant: PAR-CLIPenzyma. (cell line)		SRR330917(SRX091755)
tissue: normal skindisease state: normal. (skin)		SRR191551(GSM715661)
32genomic small RNA (size selected RNA from t. (breast)		SRR189780(GSM714640)
cell line: HEK293clip variant: PAR-CLIPenzyma. (cell line)		TAX577590(Rovira)
total RNA. (breast)		SRR191498(GSM715608)
3genomic small RNA (size selected RNA from to. (breast)		SRR191439(GSM715549)
176genomic small RNA (size selected RNA from . (breast)		SRR191548(GSM715658)
101genomic small RNA (size selected RNA from . (breast)		SRR390723(GSM850202)
total small RNA. (cell line)		SRR033713(GSM497058)
Burkitt Lymphoma (BL115). (B cell)		SRR553576(SRX182782)
source: Testis. (testes)		SRR038860(GSM458543)
MM426. (cell line)		SRR191461(GSM715571)
35genomic small RNA (size selected RNA from t. (breast)		GSM956925Ago2(GSM956925)
"cell line: HEK293 cell linepassages: 15-20ip. (ago2 cell line)		SRR330860(SRX091698)
tissue: skin psoriatic involveddisease state:. (skin)		TAX577589(Rovira)
total RNA. (breast)		SRR039622(GSM531985)
HCV(+) Adjacent Tissue Sample. (liver)		SRR330915(SRX091753)
tissue: normal skindisease state: normal. (skin)		SRR330869(SRX091707)
tissue: skin psoriatic involveddisease state:. (skin)		SRR326282(GSM769512)
"Dicer mRNA was knocked down using siDicer, t. (cell line)		SRR038863(GSM458546)
MM603. (cell line)		TAX577738(Rovira)
total RNA. (breast)		SRR326280(GSM769510)
total cell content of unperturbed cells was s. (cell line)		GSM956925Paz8D5(GSM956925)
"cell line: HEK293 cell linepassages: 15-20ip. (cell line)		SRR363674(GSM830251)
cell type: human foreskin fibroblasts (HFF)tr. (fibroblast)		TAX577745(Rovira)
total RNA. (breast)		SRR039637(GSM518474)
THP1_total_sRNAs. (cell line)		SRR191550(GSM715660)
27genomic small RNA (size selected RNA from t. (breast)		SRR033711(GSM497056)
GCB DLBCL (GCB110). (B cell)		SRR330859(SRX091697)
tissue: skin psoriatic involveddisease state:. (skin)		SRR038852(GSM458535)
QF1160MB. (cell line)		SRR330880(SRX091718)
tissue: skin psoriatic involveddisease state:. (skin)		SRR444049(SRX128897)
Sample 9cDNABarcode: AF-PP-334: ACG CTC TTC C. (skin)
...................GCTCTGTGGGTCGGGGTTGGGGG................................................................................................................................................................................................................ 2314.004.00----------------4.00----------------------------------------------------------------------------------------------------------
........................................................................................................................................................................................GGCCCCACCCCTGCATTCC............................................... 191.000.00---------------------------1.00-----------------------------------------------------------------------------------------------
..........................CCCCGACCCACAGAGCCGT............................................................................................................................................................................................................. 191.000.00-----------------------------------------------------------------------------1.00---------------------------------------------
................................................................CCTCTCTACATCCTGCAG........................................................................................................................................................................ 181.000.00------------------------1.00--------------------------------------------------------------------------------------------------
.........................................................................................................................GCTGTGTCAGGATGGTATT.............................................................................................................. 191.000.00--1.00------------------------------------------------------------------------------------------------------------------------
..........................................................................................................................................................................GGCTGCCTGACCTCGAGTT............................................................. 191.000.00------------------------------------------1.00--------------------------------------------------------------------------------
.......................................GGTGTCTGTGACTCGGCT................................................................................................................................................................................................. 1811.001.00----------------------------------------------------------------------------------1.00----------------------------------------
......................................................................TACATCCTGCTCTTCCATTTT............................................................................................................................................................... 211.000.00---------------------------1.00-----------------------------------------------------------------------------------------------
...............................................................GAGCAGGATGTAGAGAGGG........................................................................................................................................................................ 1911.001.00-------------------1.00-------------------------------------------------------------------------------------------------------
..........................................................................................................................................................................GGCTGCCTGACCTCGGCCCCACCCCTGCAGAC................................................ 321.000.00---------------------------------------------------------------------------------------------1.00-----------------------------
........................GGCTCTGTGGGTCGGGGTT............................................................................................................................................................................................................... 1911.001.00----------------------------------------------------------------------------------------------1.00----------------------------
...................CCCCCAACCCCGACCCACGGC.................................................................................................................................................................................................................. 211.000.00---------------1.00-----------------------------------------------------------------------------------------------------------
....................GGGTCGGGGTTGGGG....................................................................................................................................................................................................................... 1501.001.00-----------------------------1.00---------------------------------------------------------------------------------------------
........................................GCCGAGTCACAGACACAG................................................................................................................................................................................................ 181.000.00------------------------------------------------------------------------------------------1.00--------------------------------
.......................................................................................................................................................................................CGGCCCCACCCCTGCACGGG............................................... 201.000.00----------------------1.00----------------------------------------------------------------------------------------------------
..............................................................GGATGTAGAGAGGGC............................................................................................................................................................................. 1560.170.17-------------------------------------------------------------------------------------------------------------------------0.17-